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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002893 ID=TCONS_00002893|Name=TCONS_00002893|organism=Clytia hemisphaerica|type=transcript|length=628bp
aattgataTATAGCGATAAGTCAACGCCTAATCTTTCCAGTTCAAGTGAA
GCTTTCACGCAACAAAGAGCTAAACATTTTACAATCAAGTTAGTTAAAAA
CATTTATTACAAAACATGAAGAAATTTGTAGGTCTTGTATTTGCTGCGAC
AGTTCTTGTCATCTGTTTGAATTTTGTTTCGGCGCAAGTTGGTCCAACAT
GCTGCCCAGCGAGTGACCCTTGTGAAAACATCATTTGTGGCAGAAATAAG
CAATGTATTCCACATCCCAATCGATGTTCATACTATTGTGTGACTGTTTC
ATGTCCAAATCACTTGAATTGTAAACAACCAGCTTGTGACGGGAATCCGT
GTGCACCACATTTGAACTGCATCAATGACTGTCCCAGCTCGTGTTTACAC
GCTTGTGAAGTGCCAAGATCATACCCATGCAGGggaaaatgatttatttt
gttttgtgatttattttctgcgtcttacacgtttttttataagaatacat
tttataagaatgtccataatgaaaatggctaaaaaattaagaatagtgct
aagaatatcaccatcatgtaATTTTGCTACTGAAGCTAAGAATACCATTT
TtggagcattttcaattatgaaTTGTCA Run BLAST on NCBI transcript from alignment at sc0000023:928762..930554- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002893 ID=TCONS_00002893|Name=TCONS_00002893|organism=Clytia hemisphaerica|type=transcript|length=1793bp|location=Sequence derived from alignment at sc0000023:928762..930554- (Clytia hemisphaerica)
AATTGATATATAGCGATAAGTCAACGCCTAATCTTTCCAGTTCAAGTGAA
GCTTTCACGCAACAAAGAGCTAAACATTTTACAATCAAGTTAGTTAAAAA
CATTTATTACAAAACATGAAGAAATTTGTAGGTCTTGTATTTGCTGCGAC
AGTTCTTGTCATCTGTTTGAATTTTGTTTCGGCGCAAGTTGGTAAGTAAT
TTGTCTGGAATATTTTACTTACATTTCTGCTTATTGTAGAGTGGGTGACA
GAGCAGATGTACTCTTTAGTACTTGATTGTAGGAGGTGCAATAGGCAGGG
GTACTCGTGGAGAAAATCGATAAAATGGGGGGTCTTTATTAAGTGATTTT
GGGGTGATTTTTTGGCATACTTTTTCAGGAAAATTTCATAAAATGGGGGT
TCATTATAAAATGCTATTGGGGTGATTTTTTCGGAAAAATTCCAAATAAG
CGTCCCCCCCGCTTGTTAATTTTCGAAAACTTTCCAACCCCCGGACCTTA
TTAGGAATCCCCCCCCCCCCTTTTAATTAATTTTTAAGATTTTTTTTCAG
CTGTCAAAGAGAAGGCCCCTTATTTTGCTCTAAATAGCCTTATTTTAGCC
TTATTTTTGGGTTTTCAGAAGTACAATTCCCACCCCCAAGCAATTTGAAA
CCTAACAGTATCGGTGTTGTGCGAGATTTAGAAGCCTCGCACGATGGATA
GGATACTAGATTAACATAATAAAGGGCTCTATGTTCTTTTAGGTCCAACA
TGCTGCCCAGCGAGTGACCCTTGTGAAAACATCATTTGTGGCAGAAATAA
GCAATGTATTCCACATCCCAATCGATGTTCATACTATTGTGTGACTGTTT
GTAAGTTAAATTGTTGGTCATTTTTTATAAATGGAATGAATAATTTTCGG
TCACATGTGTAGTCAAAAAAGGGCTTTTCCAGAAAGAATTTTACCCTTAC
TGTTGAGAATATTGATTTTTCGAAGTATCGAACCTTTTCCTTTATTAGAA
AAAGACCCCCTGGATATCCTCTCTTATAAAGATGCTTACCCCTTGGATAT
CGTATTTACTTGAAAAGACACTTTACCCCCTGGATATCCACTCCCTTGTA
GATATTTAACCCCCTGGATATCCACTTTTGAACAAAAATCGTTAACCGAT
ATCCGGTGTCCTCAACAGGGGACCACGGACTATTTTTGGAAAAACATTAT
CTTCTAAAAATCTTCTATCTTTTACTTCATAAATATATTCCTTCTAATTA
TCTTGAAAATTTGTGCTAAGAACTGGAGAGGGTCCTTTTTCAAGTTCTGA
AGACATCGGACAAGGGTGCAAATTTAATAAAATTTTTCCGACAGAGCTGA
TTTTCAGGGTTGGTTTTGTAGTAAATCTACAGTGCATCTATTCAAGACAT
ATGACTCGTCATCGTCATAATATTTGCTATTATATTTCTTGTTCTGCTTT
TCATTTTATTCCAGCATGTCCAAATCACTTGAATTGTAAACAACCAGCTT
GTGACGGGAATCCGTGTGCACCACATTTGAACTGCATCAATGACTGTCCC
AGCTCGTGTTTACACGCTTGTGAAGTGCCAAGATCATACCCATGCAGGGG
AAAATGATTTATTTTGTTTTGTGATTTATTTTCTGCGTCTTACACGTTTT
TTTATAAGAATACATTTTATAAGAATGTCCATAATGAAAATGGCTAAAAA
ATTAAGAATAGTGCTAAGAATATCACCATCATGTAATTTTGCTACTGAAG
CTAAGAATACCATTTTTGGAGCATTTTCAATTATGAATTGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002893-exon-sc0000023-1575043694:930364..930554 | TCONS_00002893-exon-sc0000023-1575043694:930364..930554 | Clytia hemisphaerica | exon |
| TCONS_00002893-exon-sc0000023-1575043694:929705..929812 | TCONS_00002893-exon-sc0000023-1575043694:929705..929812 | Clytia hemisphaerica | exon |
| TCONS_00002893-exon-sc0000023-1575043694:928762..929090 | TCONS_00002893-exon-sc0000023-1575043694:928762..929090 | Clytia hemisphaerica | exon |
| TCONS_00002893-exon-sc0000023-1510915933:930364..930554 | TCONS_00002893-exon-sc0000023-1510915933:930364..930554 | Clytia hemisphaerica | exon |
| TCONS_00002893-exon-sc0000023-1510915933:929705..929812 | TCONS_00002893-exon-sc0000023-1510915933:929705..929812 | Clytia hemisphaerica | exon |
| TCONS_00002893-exon-sc0000023-1510915933:928762..929090 | TCONS_00002893-exon-sc0000023-1510915933:928762..929090 | Clytia hemisphaerica | exon |
| TCONS_00002893-exon-sc0000023-1491911889:930364..930554 | TCONS_00002893-exon-sc0000023-1491911889:930364..930554 | Clytia hemisphaerica | exon |
| TCONS_00002893-exon-sc0000023-1491911889:929705..929812 | TCONS_00002893-exon-sc0000023-1491911889:929705..929812 | Clytia hemisphaerica | exon |
| TCONS_00002893-exon-sc0000023-1491911889:928762..929090 | TCONS_00002893-exon-sc0000023-1491911889:928762..929090 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023 | supercontig | sc0000023:928762..930554 - |
Blast
The following BLAST results are available for this feature:
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