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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002891 ID=TCONS_00002891|Name=TCONS_00002891|organism=Clytia hemisphaerica|type=transcript|length=862bp
TTTATAAAAATGTCTGACCTAAATTTTTGATATAATcaataaaataattc
aataaataATCTTTTTCTTCGATTGACTAAAATATATACAGATTTGAATA
TTAAGTATGttaaaaaagctctaaaattttaatttgaagaaGTACTAACT
GAAAGTATAATTTAGAAAGATGACAAAGCACTAAAGCCGTCTTTTAAAAT
TGCTAAACTTTCAGGAACACTTTTGATAGGAGTCCAGACAATATTTCTTC
TGGAACGTTTCTTGATAGCGGCTCCATAATGAATCACCACGCTTTTGTAG
CTTTGTTTTGGTGCAACAGATACTGCAATCAGGCTTCCAAATCTTTGTCT
gattttgatattaacaaaggtATTTCGTTGGACTCTGACACTAGCCATGA
GTGGTCTTGGCGTCACTTTGGTTACACCATGGCATTTAAAGATTTTATGC
TTTTTACAATCGAATGGTATGAATTTAGTTGGTCTAACAATGTTTCTTCT
TTTGcgtttctttaaaaacaaagattcaATATTGATGCTGGAAATTGTAT
ATTCACCGTTGAGTAATTCTTCAATTTCAACTGAAATCTTCTTTTCAGAT
TTAGAATCTAAATCAAAATTCTTAATCTGGCATTCATCCCTTTTTAACGA
GTTTCTGCAGAATGtgaatttctttaaagcttTCTTGATCTTTCTGATTG
tctttttatcaaaagtaactggtgaaacagcttcATCAGATTTACCGAAG
ATGATGCCAGAGATGTAAATATCTTGATTTTCACTACTTTCTTGGTTGAA
ACTGGTCAACTCCATATCAGCTTGTTGATTACTGTCATTAGGATCTCCAG
AACTGCAAAGTC Run BLAST on NCBI transcript from alignment at sc0000023:839860..840776- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002891 ID=TCONS_00002891|Name=TCONS_00002891|organism=Clytia hemisphaerica|type=transcript|length=917bp|location=Sequence derived from alignment at sc0000023:839860..840776- (Clytia hemisphaerica)
TTTATAAAAATGTCTGACCTAAATTTTTGATATAATCAATAAAATAATTC
AATAAATAATCTTTTTCTTCGATTGACTAAAATATATACAGATTTGAATA
TTAAGTATGTTAAAAAAGCTCTAAAATTTTAATTTGAAGAAGTACTAACT
GAAAGTATAATTTAGAAAGATGACAAAGCACTAAAGCCGTCTTTTAAAAT
TGCTAAACTTTCAGGAACACTTTTGATAGGAGTCCAGACAATATTTCTTC
TGGAACGTTTCTTGATAGCGGCTCCATAATGAATCACCACGCTTTTGTAG
CTTTGTTTTGGTGCAACAGATACTGCAATCAGGCTTCCAAATCTTTGTCT
GATTTTGATATTAACAAAGGTATTTCGTTGGACTCTGACACTAGCCATGA
GTGGTCTTGGCGTCACTTTGGTTACACCATGGCATTTAAAGATTTTGNGC
CATGAGTGGTCTTGGCGTCACTTTGGTTACACCATGACATTTAAAGATTT
TATGCTTTTTACAATCGAATGGTATGAATTTAGTTGGTCTAACAATGTTT
CTTCTTTTGCGTTTCTTTAAAAACAAAGATTCAATATTGATGCTGGAAAT
TGTATATTCACCGTTGAGTAATTCTTCAATTTCAACTGAAATCTTCTTTT
CAGATTTAGAATCTAAATCAAAATTCTTAATCTGGCATTCATCCCTTTTT
AACGAGTTTCTGCAGAATGTGAATTTCTTTAAAGCTTTCTTGATCTTTCT
GATTGTCTTTTTATCAAAAGTAACTGGTGAAACAGCTTCATCAGATTTAC
CGAAGATGATGCCAGAGATGTAAATATCTTGATTTTCACTACTTTCTTGG
TTGAAACTGGTCAACTCCATATCAGCTTGTTGATTACTGTCATTAGGATC
TCCAGAACTGCAAAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002891-exon-sc0000023-1575043694:840344..840776 | TCONS_00002891-exon-sc0000023-1575043694:840344..840776 | Clytia hemisphaerica | exon |
| TCONS_00002891-exon-sc0000023-1575043694:839860..840288 | TCONS_00002891-exon-sc0000023-1575043694:839860..840288 | Clytia hemisphaerica | exon |
| TCONS_00002891-exon-sc0000023-1510915933:840344..840776 | TCONS_00002891-exon-sc0000023-1510915933:840344..840776 | Clytia hemisphaerica | exon |
| TCONS_00002891-exon-sc0000023-1510915933:839860..840288 | TCONS_00002891-exon-sc0000023-1510915933:839860..840288 | Clytia hemisphaerica | exon |
| TCONS_00002891-exon-sc0000023-1491911889:840344..840776 | TCONS_00002891-exon-sc0000023-1491911889:840344..840776 | Clytia hemisphaerica | exon |
| TCONS_00002891-exon-sc0000023-1491911889:839860..840288 | TCONS_00002891-exon-sc0000023-1491911889:839860..840288 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023 | supercontig | sc0000023:839860..840776 - |
Blast
The following BLAST results are available for this feature:
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