TCONS_00002822 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002822
Unique NameTCONS_00002822
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002822 ID=TCONS_00002822|Name=TCONS_00002822|organism=Clytia hemisphaerica|type=transcript|length=165bp
CTTCTTTTTGTTCCTCTGCCAATTCTCCTTTTGGGAAATCAACATCGAAA
GTGATCACTAAGACACCCTTGTCCAAATTATTATGATAATTGGGCATCCC
TTCTCCCTTCTTCTTGATTTTGGCACCAGATGTTTGAATTCCATATCGAA
ACCGTTCAAGGCGTC
Run BLAST on NCBI

transcript from alignment at sc0000023:738277..738487+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002822 ID=TCONS_00002822|Name=TCONS_00002822|organism=Clytia hemisphaerica|type=transcript|length=211bp|location=Sequence derived from alignment at sc0000023:738277..738487+ (Clytia hemisphaerica)
CTTCTTTTTGTTCCTCTGCCAATTCTCCTTTTGGGAAATCAACATCGAAA
GTGATCACTAAGACACCCTTGTCCAAATTATTATGATAATTGGGCATCCC
TTCTCCCTTCTTCTTGATTTTGGCACCAGGCCATGTGATCTTTTCGCGGT
GAACTTTGACCACGTGACCATCTAGATGTTTGAATTCCATATCGAAACCG
TTCAAGGCGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001539XLOC_001539Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002822-exon-sc0000023-1491911889:738277..738405TCONS_00002822-exon-sc0000023-1491911889:738277..738405Clytia hemisphaericaexon
TCONS_00002822-exon-sc0000023-1510915933:738277..738405TCONS_00002822-exon-sc0000023-1510915933:738277..738405Clytia hemisphaericaexon
TCONS_00002822-exon-sc0000023-1575043694:738277..738405TCONS_00002822-exon-sc0000023-1575043694:738277..738405Clytia hemisphaericaexon
TCONS_00002822-exon-sc0000023-1491911889:738452..738487TCONS_00002822-exon-sc0000023-1491911889:738452..738487Clytia hemisphaericaexon
TCONS_00002822-exon-sc0000023-1510915933:738452..738487TCONS_00002822-exon-sc0000023-1510915933:738452..738487Clytia hemisphaericaexon
TCONS_00002822-exon-sc0000023-1575043694:738452..738487TCONS_00002822-exon-sc0000023-1575043694:738452..738487Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:738277..738487 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002822 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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