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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002813 ID=TCONS_00002813|Name=TCONS_00002813|organism=Clytia hemisphaerica|type=transcript|length=7932bpRun BLAST on NCBI protein sequence of TCONS_00002813-protein >TCONS_00002813-protein ID=TCONS_00002813-protein|Name=TCONS_00002813-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2057bp MNFGLCGCLAYITLCLHLFTIEARSVSYNLLDYSHIQVTKSVTRRINGYCRun BLAST on NCBI transcript from alignment at sc0000023:610718..658554+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00002813 ID=TCONS_00002813|Name=TCONS_00002813|organism=Clytia hemisphaerica|type=transcript|length=47837bp|location=Sequence derived from alignment at sc0000023:610718..658554+ (Clytia hemisphaerica) Coding sequence (CDS) from alignment at sc0000023:610718..658554+ >TCONS_00002813 ID=TCONS_00002813|Name=TCONS_00002813|organism=Clytia hemisphaerica|type=CDS|length=203742bp|location=Sequence derived from alignment at sc0000023:610718..658554+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00002813 vs. Swiss-Prot (Human)
Match: LAMA5 (Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8) HSP 1 Score: 556.984 bits (1434), Expect = 6.602e-160 Identity = 382/1207 (31.65%), Postives = 556/1207 (46.06%), Query Frame = 3
Query: 1146 STDVRQ--LPFSYFVHKRKRRSVCECSSVGTLYGVCY--PIVGLGHQCPCKHSYRGKFCNKCSDGYHGFPECKECFCHYIGSKNADCDVMTGKCRCHSKYSGLKCDKCAPGRYNXXXXXXXXXXTERTKATVCDSVTGRCHCSERFTGEKCASCAKWFQNFPVCHRPGCKCNKLGAYNGTCNNRRNCFCKPMYTGKRCDMCKAGYGDFPKCKACDCNTAGSYSNICDARTGQCHCKPSFKGKNCDQCIQAGLAFPDCEGNAKCKCHKEGTLLDRKRKGPCINE--LSCLCKENVEGADCSRCKSQHYGLSRSNHKGCSPCNCYKPGCFGNIATCDISTGQCYCKEFTTGKRCDKCKTGYYSLDRFNLFGCTACNCDVGGSLSPNCDD-LGNCECKPNFQGKTCSELKKDQSFVPDYYHHLFEM-ESSTNEGKPVIYQYNSIEFPNFSGKGYIAFTNSQTNTKLAIEVPKTRKYILLIHYMLRREEKASILVYFTSKDRGSS----YVASIDLFKTDESFSRYSTFTVSGGRREIVLSKGSWDLELSSTSQDLLVDHVVLVPEEYYTAKKLQPAAVQPCL---AGQPKETLCVDYKYIDLNNFLNVQAESGTNSKGYGPEVVENTRLFNDPDILQQLPVINDMAELSPKQIALTLEVDVVEKGSYHIVVTYFNPDDRT-YRLDLHDSESGTHGSVEAL-PCLYRFLCRTVVLVHQGRPFTVTYNVNRTVDITFLGNIRGSLSIDYVTFIPVDSWSPDYVIPRDTCIQKDG-------SCLQNVQFQTPDDAVQMKPTKDNPLN---PLTKAVYLT------------------DKKP---------VYFTASIIKPAKYIVVYQYYQPNSPRYEISINIQGKSFRKTTHVNVPFCPSNVGCRAAFT---HGMLDI--GEVTVSFEVPNGKELWIDSVYFIPEESYQHHDYITPKRTELISKFKRSCLDDKGLPKRPPPDG-FCSNALVTLTSEFTSQTFTCNCDKRGSVSQECNRIGGHCKCKANVIGKNCNKCKTGYYGFPNCKACNCFIAGSKTADCNRYGQCACKPQYTGRTCNRCRSGNWG---FPDCRSCSCDRRGSFTL---TCRSTDGQCPCLRNYAGRACGQCQIGFFDFPYCRSCNCHSAGIVVTKETPTGCYRKNPDRCDCKQNVEGSTCNRCKVNYYNMQLDNPLGCTACNCSTFGS 4568
S D R+ LP V+ C+CS+ GT C P VG +C CK +++G C C+ G++G P C+ C C G + CD TG+CRC + G CD+CAPG ++FP C C C T CD GRC C F G C C + FP C C C+ GA + C C C+P YTG C C G+ FP C C C+ GS CD R+GQC C+P G CD C+ FP CE + CH G P + E + C+C+ +VEG C RCK +GLS SN +GC+ C+C G G +A C TGQC+CK G+ C CK G++ LD+ + FGC +C CD+GG+L +C+ G C C+PN QG TCSE +D ++PD +H E+ E++T EG V + +N +EF NFS +GY Q + + + L+ Y+ R S V + R ++ S + + + T G VL+ G+W L + ++ +L+D+VVL+P YY A LQ + C + Q C+ Y ++ L+ F ++ G ++ L Q P + + + + L+V V + G Y +VV Y N D R + +H + + +L PCLY LCR Q + +V +T + + VT +P++ +SP++V PR +CI G +CL + +F P + ++ + PL PLT A LT D +P V FT + +Y + YQP P + + + I + H N FCP GCR +LD+ E+TV+ VP G+ LW+D V +PE Y Y+ + + F C +G P FC NA +L+ + + C C + G+ C GG C C A+VIG++C++C TGY+GFPNC+ C+C G++ D GQC C P+ C C+ +G C C+C G L TC + GQC C N GR C C GF +P CR C+CH AG T G +C CK+NV+G C++C + +++ NP GCT C C FG+
Sbjct: 478 SNDTREQVLPAGQIVN-------CDCSAAGTQGNACRKDPRVG---RCLCKPNFQGTHCELCAPGFYG-PGCQPCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHFPLCQLCGCSPAGTLPEGCDEA-GRCLCQPEFAGPHCDRCRPGYHGFPNCQ--ACTCDPRGALDQLCGAGGLCRCRPGYTGTACQECSPGFHGFPSCVPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRCDTCVPGAYNFPYCEAGS---CHPAGL----APVDPALPEAQVPCMCRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQSCEPRTGVCRCRPNTQGPTCSEPARDH-YLPDLHHLRLELEEAATPEGHAVRFGFNPLEFENFSWRGYAQMAPVQPRIVARLNLTSPDLFWLVFRYVNRGAMSVSGRVSVREEGRSATCANCTAQSQPVAFPPSTEPAFITVPQRGFGEPFVLNPGTWALRVE--AEGVLLDYVVLLPSAYYEAALLQLRVTEACTYRPSAQQSGDNCLLYTHLPLDGF--------PSAAGLEALCRQDNSLPRPCPTEQLSPSHPPLITCTGSDVDVQLQVAVPQPGRYALVVEYANEDARQEVGVAVHTPQRAPQQGLLSLHPCLYSTLCRGTARDTQDHLAVFHLDSEASVRLT---AEQARFFLHGVTLVPIEEFSPEFVEPRVSCISSHGAFGPNSAACLPS-RFPKPPQPIILRDCQVIPLPPGLPLTHAQDLTPAMSPAGPRPRPPTAVDPDAEPTLLREPQATVVFTTHVPTLGRYAFLLHGYQPAHPTFPVEVLINAGRVWQ-GHANASFCPHGYGCRTLVVCEGQALLDVTHSELTVTVRVPKGRWLWLDYVLVVPENVYS-FGYLREEPLDKSYDFISHCA-AQGYHISPSSSSLFCRNAAASLSLFYNNGARPCGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFPNCRPCDC---GARLCD-ELTGQCICPPRTIPPDCLLCQPQTFGCHPLVGCEECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFHGYPRCRPCDCHEAG------TAPGVCDPLTGQCYCKENVQGPKCDQCSLGTFSLDAANPKGCTRCFC--FGA 1633 HSP 2 Score: 331.257 bits (848), Expect = 1.326e-90 Identity = 246/933 (26.37%), Postives = 397/933 (42.55%), Query Frame = 3
Query: 3963 CNCDKRGSVSQECNRIGGHCKCKANVIGKNCNKCKTGYYGFPNCKACNCFIAGSKTADCNRYGQCACKPQYTGRTCNRCRSGNWGFPDCRSCSCDRRGSFTLTCRSTDGQCPCLRNYAGRACGQCQIGFFDFPYCRSCNCHSAGIVVTKETPTGCYRKNPDRCDCKQNVEGSTCNRCKVNYYNMQLDNPLGCTACNCSTFGSIRGAGTCHRENGQCICQPNVIGRRCDTCKDGFYVVKKDKVFSCQPCLCSSGGSLHGVCDKITGQCKCKPKVGGLKCDKEEEGGYYLPSIGQYIFSADDIVPHAPHEF-FG---------DFDGALVNGSFASRRVS-FNVTEKEQTFYIMVY-----YSLTSHISPRIDLEFSKDEKILPVTNYLKAKEFQQPTLDIIRDNNSYLMTNLTQGLWHLQLILYKSFILNQITMVPIEQISKQKVSKSINNPCTISDGRRY----CSMYTYFEL------SNVGAVLIQG---------EELSNDGADLFDLEKYRGANIDGAVKLSMNKGLAYSLYDARPEPFYVVIQYLNTDLNSSMVELSILNRGITQKGTVELFPCIYAFGCRQVILVERTDSKLLFTGNDKARTITLKSLNKYQAYIDFVALIPKSKWNPNIISPAFYC-------NRRLSRCIDGEFPST--------------------TNTQQI-EAKKALGVRASAP----PDGHPTSLAVLMTPRRQRNLRWIKPLKT-GSYYMIIHYYQPLYDKFPSKVIVMTYQRAVAGKVFFHYCPSVHGCRSVV----KYLLDDDNQRFPVSGNIMRVSFTLPRYSKLWVERIVLVPVNEYHENILELSPLDITKRYLRKCIGRQSNQIEKSNREFCRSATFELTLGLNKYPTPCICNARGSHPYVNCNPQNGQCSCKQGFRGKDCSKCVQGF--FPHCR 6539
C C G++ + C+ G C C+ G +C++C+ GY+GFPNC+AC C G+ C G C C+P YTG C C G GFP C C C GS C GQC C G C C G ++FPYC + +CH AG+ P + P C C+ +VEG +C+RCK ++ + NP GCT C+C G++ G C GQC C+P+V G+ C +CKDGF+ + + F C+ C C GG+L C+ TG C+C+P G C E +YLP + ++ H FG + G R V+ N+T + + + Y S++ +S R + + + + +P + L G W L+ + + +L+ + ++P + + CT + C +YT+ L + + A+ Q E+LS L G+++D +++++ + Y+L V++Y N D + + Q+G + L PC+Y+ CR T L D ++ L + + + ++ V L+P +++P + P C + C+ FP T+ Q + A G R P PD PT +L P Q + + + T G Y ++H YQP + FP +V++ R G +CP +GCR++V + LLD V+ + + V+ +P+ LW++ +++VP N Y L PLD + ++ C + + S+ FCR+A L+L N PC C+ G+ C P GQC C G+DCS+C G+ FP+CR
Sbjct: 587 CGCSPAGTLPEGCDE-AGRCLCQPEFAGPHCDRCRPGYHGFPNCQACTCDPRGALDQLCGAGGLCRCRPGYTGTACQECSPGFHGFPSCVPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRCDTCVPGAYNFPYCEAGSCHPAGLAPVD--PALPEAQVP--CMCRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQSCEPRTGVCRCRPNTQGPTC-SEPARDHYLPDLHHLRLELEEAATPEGHAVRFGFNPLEFENFSWRGYAQMAPVQPRIVARLNLTSPDLFWLVFRYVNRGAMSVSGRVSVREEGRSATCANCTAQSQPVAFPPSTEPAFITVPQRGFGEPFVLNPGTWALR-VEAEGVLLDYVVLLPSAYYEAALLQLRVTEACTYRPSAQQSGDNCLLYTHLPLDGFPSAAGLEALCRQDNSLPRPCPTEQLSPSHPPLITCT---GSDVDVQLQVAVPQPGRYAL----------VVEYANEDARQEVGVAVHTPQRAPQQGLLSLHPCLYSTLCRGT--ARDTQDHLAVFHLDSEASVRLTA-EQARFFLHGVTLVPIEEFSPEFVEPRVSCISSHGAFGPNSAACLPSRFPKPPQPIILRDCQVIPLPPGLPLTHAQDLTPAMSPAGPRPRPPTAVDPDAEPT---LLREP--QATVVFTTHVPTLGRYAFLLHGYQPAHPTFPVEVLI-NAGRVWQGHANASFCPHGYGCRTLVVCEGQALLD-------VTHSELTVTVRVPKGRWLWLDYVLVVPENVYSFGYLREEPLDKSYDFISHCAAQGYHISPSSSSLFCRNAAASLSLFYNNGARPCGCHEVGAT-GPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFPNCR 1482 HSP 3 Score: 169.088 bits (427), Expect = 2.528e-41 Identity = 107/315 (33.97%), Postives = 139/315 (44.13%), Query Frame = 3
Query: 3963 CNCDKRGSVSQECNRIGGHCKCKANVIGKNCNKCKTGYYGFPNCKA--------------------CNCFIAGSKTADCN---RYGQCACKPQYTGRTCNRCRSGNWGFPDCRSCSCDRRGSFTLTCRSTDGQCPCLRNYAGRACGQCQIGFFDFPYCRSCNCHSAGIVVTKETPTGCYRKNPDRCDCKQNVEGSTCNRCKVNYYNMQLDNPLGCTACNCSTFGSIR---GAGTCHRENGQCICQPNVIGRRCDTCKDGFYVVKKDKVFSCQPCLCSSGGSLHGVCDKITGQCKCKPKVGGLKCDKEEEGGYYLP 4829
CNC+ C + G C C+ N G+ C+ C G+ GFP+C C+C AG++ C R G+C CKP + G C C G +G P C+ C C G C GQC C + G C +C G+F FP C+ C C AG + P GC RC C+ G C+RC+ Y+ C AC C G++ GAG G C C+P G C C GF+ SC PC CS+ GSLH CD +GQC C+P+V GL+CD G Y P
Sbjct: 429 CNCES-DFTDGTCEDLTGRCYCRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG-PGCQPCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHFPLCQLCGCSPAGTL-----PEGC--DEAGRCLCQPEFAGPHCDRCRPGYHGFP-----NCQACTCDPRGALDQLCGAG------GLCRCRPGYTGTACQECSPGFHGFP-----SCVPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRCDTCVPGAYNFP 718 HSP 4 Score: 152.91 bits (385), Expect = 1.862e-36 Identity = 117/411 (28.47%), Postives = 163/411 (39.66%), Query Frame = 3
Query: 1272 QCPCKHSYRGKFCNKCSDGYHGFP----------ECKECFCH--------------YIGSKNADCDVMTGKC--RCHSKYSGLKCDKCAPGRYNXXXXXXXXXXTER--------TKATVCDSVTGRCHCSERFTGEKCASCAKWFQNFPVCHRP------------------GCKCNKLGAYNGTCNNRR---NCFCKPMYTGKRCDMCKAG-YGDFPKCKACDCNTAGSYSNICDARTGQCHCKPSFKGKNCDQCIQAGLAFPDCEGNAKCKCHKEGTLLDRKRKGPCINELSCLCKENVEGADCSRCKSQHYGLSRSNHKGCSPCNCYKPGCFGNIATCDISTGQCYCKEFTTGKRCDKCKTGYYSLDRFNLFGCTACNCDVGGSLSPNCDDL-GNCECKPNFQGKTC 2333
QC C+H+ G C++C G++ P EC+ C C+ S++ D G C +G+ C++C PG Y P R T T C+ +TGRC+C F+GE+C CA+ F FP C+ C C+ G C C CKP + G C++C G YG P C+ C C++ G + CD TGQC C+ F+G CD+C FP C+ C C GTL + C CLC+ G C RC+ ++G C C C G + + G C C+ TG C +C G++ C C+C GSL CD G C C+P G C
Sbjct: 321 QCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANECQSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPNHPLDSPHVCRRCNCESDFTDGT-CEDLTGRCYCRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG--PGCQPCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHFPLCQ---LCGCSPAGTLPEG-----CDEAGRCLCQPEFAGPHCDRCRPGYHGF-----PNCQACTCDPRGALDQLCG---AGGLCRCRPGYTGTACQECSPGFHGFP-----SCVPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRC 707 HSP 5 Score: 122.094 bits (305), Expect = 4.371e-27 Identity = 79/201 (39.30%), Postives = 100/201 (49.75%), Query Frame = 3
Query: 4230 RSCSCDRRGSFTLTCRSTDGQCPCLRNYAGRACGQCQIGFFDFPYCRSCNCHSAGIVVTKETPTGCYRKNPDRCDCKQNVEGSTCNRCKVNYYNMQLDNPL-GCTACNCSTFGSIRGAG-TCHRENGQCICQPNVIGRRCDTCKDGFYVVKKDKVFSCQPCLCSSGGSLHGVCDKITGQCKCKPKVGGLKCDKEEEGGYYL 4826
R C C G+ TC GQCPC + GR C +C G++ FP CR C+C G + E TG +C C C C+ + +PL GC CNCS G TC ++GQC C+PNV GRRCDTC GF+ + C+PC C G+ GVCD +TGQC CK V G KCD+ G + L
Sbjct: 1436 RPCGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFPNCRPCDC---GARLCDEL-TG-------QCICPPRTIPPDCLLCQPQTFGC---HPLVGCEECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFHGYPR-----CRPCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCDQCSLGTFSL 1617 HSP 6 Score: 107.457 bits (267), Expect = 1.169e-22 Identity = 93/313 (29.71%), Postives = 127/313 (40.58%), Query Frame = 3
Query: 3942 FTSQTFTCNCDKRGSVSQECNRIGGHC-KCKANVIGKNCNKCKTGYYGFPN-----CKACNCFIAGSK---TADCNRYG---QCACKPQYTGRTCNRCRSGNWGFP-----DCRSCSCDRRGSFTLT---CRSTDGQC-PCLRNYAGRACGQCQIGFFDFPY----CRSCNCHSAGIVVTKETPTGCYRKNP--DRCDCKQNVEGSTCNRCKVNYYNMQLDNPLGCTACNCSTFGSIRGAGTCHRENGQCICQPNVIGRRCDTCKDGFYVVKKDKVFSCQPCLCSSGGSLHGVCDKITGQCKCKPKVGGLKCD 4799
F + C C S C G C C+ N G +C +C+ G+ + C +C C ++ C G QC CKP Y G +C RC G +G P C+ C C G L C G C CLR+ G C C GF+ C C+C TP G +P C CK V G C+RC+ ++ D GC C C G CH ++GQC C+P +G +C C G++ + + C+ C C G CD TG+C C P + G +CD
Sbjct: 1857 FLGRCVPCQCHGH---SDRCLPGSGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDC----------TPCGTEACDPHSGHCLCKAGVTGRRCDRCQEGHFG--FDGCGGCRPCAC---GPAAEGSECHPQSGQCHCRPGTMGPQCRECAPGYWGLPEQ---GCRRCQCPG-----GRCDPHTGRCNCPPGLSGERCD 2143 HSP 7 Score: 103.219 bits (256), Expect = 2.166e-21 Identity = 97/334 (29.04%), Postives = 121/334 (36.23%), Query Frame = 3
Query: 1413 CRCHSKYSGLKCDKCAPGRYNXXXXXXXXXXTERTKATVCDSVTGRC--------HCSERFTGEKCASCAKWF---QNFPVCHRPGCKC------NKLGAYNGTCNNRRNCFCKPMYTGKRCDMCKAGYGDFP-----KCKACDCNTAGSYSNI---CDARTGQCH-CKPSFKGKNCDQCIQAGLAFPDCEGN-AKCKCHKEGTLLDRKRKGPCINELSCLCKENVEGADCSRCKSQHYGLSRSNHKGCSPCNCYKPGCFGNIATCDISTGQCYCKEFTTGKRCDKCKTGYYSLDRFNLFGCTACNCDVGGSLSPNCDDLGNCECKPNFQGKTC 2333
C C + Y G C +CAPG Y R C + RC C G C C F ++ P C C N R C CKP Y G C+ C G+ P C+ CDC+ G + + CD TG C C G C+ C GN +C C GT G CLCK V G C RC+ H+G GC PC C G + C +GQC+C+ T G +C +C GY+ L GC C C GG P+ G C C P G+ C
Sbjct: 1831 CLCPASYRGDSCQECAPGFYRDVKGLFLG----RCVPCQCHGHSDRCLPGSGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGTEACDPHSG------HCLCKAGVTGRRCDRCQEGHFGFDGCG--GCRPCAC---GPAAEGSECHPQSGQCHCRPGTMGPQCRECAPGYWGLPE---QGCRRCQCP-GGRCDPH---TGRCNCPPGLSGERC 2142 HSP 8 Score: 102.834 bits (255), Expect = 3.029e-21 Identity = 71/218 (32.57%), Postives = 92/218 (42.20%), Query Frame = 3
Query: 1272 QCPCKHSYRGKFCNKCSDGYHGFP-----ECKECFCHYIGSKN---ADCDVMTGKCR-CHSKYSGLKCDKCAPGRYNXXXXXXXXXXTERTK--ATVCDSVTGRCHCSERFTGEKCASCAKWFQNFPVCH--RPGCKCNKLGAYNGTCNNRRNCFCKPMYTGKRCDMCKAGYGDFPK--CKACDCNTAGSYSNICDARTGQCHCKPSFKGKNCDQCIQ 1880
QC CK Y G C +C+ G+ G P C+ C C G N +DCD +TG CR C +G +C+ CAPG Y + T CD +G C C TG +C C + F C RP C C + C C+P G +C C GY P+ C+ C C CD TG+C+C P G+ CD C Q
Sbjct: 1936 QCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGTEACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRP-CACGPAAEGSECHPQSGQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQCP-----GGRCDPHTGRCNCPPGLSGERCDTCSQ 2147 HSP 9 Score: 95.9005 bits (237), Expect = 3.055e-19 Identity = 91/300 (30.33%), Postives = 125/300 (41.67%), Query Frame = 3
Query: 4020 CKCKANVIGKNCNKCKTGYYG------FPNCKACNCFIAGSKTADCNRYGQCA-CKPQYTGRTCNRCRSGNWGFPD-----CRSCSCD---RRGSFTLTC--RSTDGQCPCLRNYAGRACGQCQIGFFDFPY-----CRSCNCHSAG---IVVTKETP-TGCYRKNPDRCDCKQNVEGSTCNRCKVNYYNMQLDNPLGCTACNCSTFGSIRGAGTCHRENGQCICQPNVIGRRCDTCKDGFYVVKKDKVFSCQPCLCSSGGSLHGV-CDKITGQCKCKPKVGGLKCDKEEEGGYYLPSIG 4838
C C A+ G +C +C G+Y C C C G G C C+ G C RC++G D C SC C +F C R QC C YAG +C +C GFF P C+ C+C G ++ + P TG R C ++ G C C +Y L P CT C+C+ G+ C +G C+C+ V GRRCD C++G + D C+PC C G + G C +GQC C+P G +C + G + LP G
Sbjct: 1831 CLCPASYRGDSCQECAPGFYRDVKGLFLGRCVPCQCH--GHSDRCLPGSGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACR------GCLRHTTGPRCEICAPGFYGNAL-LPGNCTRCDCTPCGTE----ACDPHSGHCLCKAGVTGRRCDRCQEGHFGF--DGCGGCRPCAC--GPAAEGSECHPQSGQCHCRPGTMGPQCRECAPGYWGLPEQG 2113 HSP 10 Score: 92.8189 bits (229), Expect = 2.594e-18 Identity = 95/340 (27.94%), Postives = 126/340 (37.06%), Query Frame = 3
Query: 1275 CPCKHSYRGKFCNKCSDGYHG------FPECKECFCHYIGSKNADCDVMTGKC-RCHSKYSGLKCDKCAPGRYNXXXXXXX--------XXXTERTKATVCDSVTGR--CHCSERFTGEKCASCAKWFQNFPVCHRPGCK---CNKLGAYN----------GTCNNRRNCFCKPMYTGKRCDMCKAG-YGD--FP-KCKACDCNTAGSYSNICDARTGQCHCKPSFKGKNCDQCIQAGLAFPDCEGNAKCKCHKEGTLLDRKRKGPCINELSCLCKENVEGADCSRCKSQHYGLSRSNHKGCSPCNCYKPGCFGNIATCDISTGQCYCKEFTTGKRCDKC 2192
C C SYRG C +C+ G++ C C CH + C +G C C G C++C G + A C GR C C + G C CA F P+ C+ C+ G N G C C TG RC++C G YG+ P C CDC G+ + CD +G C CK G+ CD+C + F C G C C G + P + C C+ G C C ++GL +GC C C PG CD TG+C C +G+RCD C
Sbjct: 1831 CLCPASYRGDSCQECAPGFYRDVKGLFLGRCVPCQCH---GHSDRCLPGSGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRG-----CLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGTEA--CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCAC---GPAAEGSECHPQSGQ--CHCRPGTMGPQCRECAPGYWGLP---EQGCRRCQC--PG-----GRCDPHTGRCNCPPGLSGERCDTC 2145 HSP 11 Score: 86.6557 bits (213), Expect = 2.345e-16 Identity = 80/282 (28.37%), Postives = 112/282 (39.72%), Query Frame = 3
Query: 1281 CKHSYRGKFCNKCSDGYHGFPE-----CKECFCHYIGSKN--ADCDVMTG---KCRCHSKYSGLKCDKCAPGRYNXXXXXXXX--------XXTERTKATVCDSVTGRCH-CSERFTGEKCASCAKWFQNFPVCHRPG----CKCNKLGAYNGTCN-NRRNCFCKPMYTGKRCDMCKAGYGDFPKC---KACDCNTAGSYSNICDARTGQCHCKPSFKGKNCDQCIQAGLAFPDCEGNAKCKCHKEGTLLDRKRKGPCINELSCLCKENVEGADCSRCKSQH 2045
C+H+ G C +C G+ + C C C N A+ V+ G +C C Y+G C++CAPG + P + CD +TG C C TG +C CA F + PG C C G C+ + +C CK TG+RCD C+ G+ F C + C C A S C ++GQCHC+P G C +C P+ +G +C+C G D C C + G C C QH
Sbjct: 1883 CQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALL--PGNCTRCDCTPCGTE--ACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE-CHPQSGQCHCRPGTMGPQCRECAPGYWGLPE-QGCRRCQC--PGGRCDPHTG-------RCNCPPGLSGERCDTCSQQH 2149 HSP 12 Score: 86.2705 bits (212), Expect = 2.616e-16 Identity = 67/224 (29.91%), Postives = 93/224 (41.52%), Query Frame = 3
Query: 3903 GFCSNALVTLTSEFTSQTFTCNCDKRGS---VSQECNRIGGHCK-CKANVIGKNCNKCKTGYYG---FP-NCKACNCFIAGSKTADCNRYGQCACKPQYTGRTCNRCRSGNWGFPDC---RSCSCDRRGSFTLTCRSTDGQCPCLRNYAGRACGQCQIGFFDFPY--CRSCNCHSAGIVVTKETPTGCYRKNPDRCDCKQNVEGSTCNRCKVNYYNMQLDNPLG 4535
GF N LV S C+C G + +C+ + G C+ C + G C C G+YG P NC C+C G++ D G C CK TGR C+RC+ G++GF C R C+C + C GQC C G C +C G++ P CR C C P G + RC+C + G C+ C + P+G
Sbjct: 1954 GFFGNPLV-----LGSSCQPCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGTEACD-PHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS-ECHPQSGQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-----------PGGRCDPHTGRCNCPPGLSGERCDTCSQQHQVPVPGGPVG 2159 HSP 13 Score: 86.2705 bits (212), Expect = 2.705e-16 Identity = 75/255 (29.41%), Postives = 98/255 (38.43%), Query Frame = 3
Query: 3948 SQTFTCNCDKRGSVSQECNRIGGHCKCKANVIGKNCNKCKTGYYGFP-----NCKACNCFIAGSKT---ADCNRY-GQC-ACKPQYTGRTCNRCRSGNWG---FP-DCRSCSCDRRGSFTLTCRSTDGQCPCLRNYAGRACGQCQIGFFDFPYCRSCNCHSAGIVVTKETPTGCYRKNPDRCDCKQNVEGSTCNRCKVNYYNMQLDNPLGCTACNCSTFGSIRGAGTCHRENGQCICQPNVIGRRCDTCKDGFYV 4670
S F C RG +Q C CK G +C +C G++G P +C+ C+C G +DC+ G C C TG C C G +G P +C C C G T C G C C GR C +CQ G F F C C + G C+ ++ +C C+ G C C Y+ + GC C C G C G+C C P + G RCDTC V
Sbjct: 1921 SNNFAEGCVLRGGRTQ--------CLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCG--TEACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSE---CHPQS-GQCHCRPGTMGPQCRECAPGYWGLPEQ---GCRRCQCP-------GGRCDPHTGRCNCPPGLSGERCDTCSQQHQV 2151 The following BLAST results are available for this feature:
BLAST of TCONS_00002813 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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