TCONS_00002811 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002811
Unique NameTCONS_00002811
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1301

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002811 ID=TCONS_00002811|Name=TCONS_00002811|organism=Clytia hemisphaerica|type=transcript|length=1301bp
AAGACGTCTATCGTCTCTCATGGATTCTCACACTCACTTTCAGTTTTTGC
AACGAAGATGCCTTAGTCTAACAGCGCAACACTTAAATAATTGGAATCCC
GTTATACGAAAACGTAACACAGACGTGGGGAAACATGTTTTTGAGGCATT
CTCTGTTCGTACATTGATAGACCAGCATCCAGAGCTGAATGGTGGTGAAA
TCCACGATGTCACACAAGGCTTGGTCAAAACAGAGATGCTGGTTGACAAA
TTGCAAGATTCATCTACTTTGCCCTCTTGTGAAGCAGTGGAAGATatttt
cagtaaaattggtGAGCTAAAATTACAGAAGAATGTAACAGAGCTTGATG
CAGTTTTGCgtgaattttctgaaaaaatctttgatGGTTTATCTCAacgt
gaaaaattatttttgatgaaaacacGACATCCAAAACACATTTTGAAAAC
AATCTGTAATTCTAAGAACATGGAATTGACAGTTGAAGTTGATTTCGATT
GTGATGAAAGTGAATGTATAGTATTTATCACTTGTGGTGACAAAGAATTA
CAAATGCGCATGCCAAAAGATAAATCGATTGCTGAGGTTGAACATGACGT
TTGTTTGTTATTACTTAATGATCATTTCTCTGAGGAATTCAATGCTTTCA
AATTCCGACTTTCTGAAGTGGTTGATGAAAGTACGATTCTATTGAATCCG
AAAGCTCCGGTCAAACGTGAGGTTTCATTGCAGAAAATATCTGAAGAAAG
TTTTGGATTCACCATCCGAGGGGGAGAGCGTAAAGCTGTACGTAATGATG
AGTATCTGCAACAATATATCACCACCCCAGTGTTCATTTCTGATATCATT
GCTGGATCACCAGCAGAGAAAGCAGGGTTAATGGTGGGTGATGTACTATT
AGCAGTCAGTGATCACGTCTTACAAGATATGGGTCATCAACAAGTTGTAC
TATCTTTGAAGAAGTTTGCCAATGTCTCTAGCGTTACTTTTACTGTCAAA
CATTCTAAACAAGAAGTCTTGAAATATGAAGCAGAGCAACGTTTTATAGA
GAGGCAGAAAGAGAAAGTTCGAGAAGAGATCCGATGTAAGAACATGAGTA
AATGGCATGATGCCAAAGCTAAGTTAGATCCTGAAGAGTATCTATTGGAA
AGattgaaagagaagaaaaagacATACGTTGCCAAGAAGCCTCGACAATC
AAGACGCCTTTGGGATTATTAGATGAAGATTTTTTAGGcttagatcttat
ttttttgtacTTTAGTTTTTACGAGAGAAAAAGGTGTCTATATTTCCAAA
C
Run BLAST on NCBI

transcript from alignment at sc0000023:590519..610237+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002811 ID=TCONS_00002811|Name=TCONS_00002811|organism=Clytia hemisphaerica|type=transcript|length=19719bp|location=Sequence derived from alignment at sc0000023:590519..610237+ (Clytia hemisphaerica)
AAGACGTCTATCGTCTCTCATGGATTCTCACACTCACTTTCAGTTTTTGG
TTtgtattcttttttatttcttgttttgaaatctaAGTTATGAAACATCC
TACTcaaggggggggcgtacggggttcgCGATTTCCGAAATAAATACCGA
ATatataatttttccaaaatttccgaaattccgcaaaaaaatacttacaa
ttcCGATACaaattttttgggtattttccctcgttttgactaatttttca
tcaaatttcccaaaattccgaaaaaaagggataaaaactttacaatactG
TACTGAAATTTCGAAGctaaaattcatggatttccgataccgaaacaatt
tcagaattccgaaataccgcaggaattttgcctgatttccaaatttccga
agaaaaaagggtcgatttccgcaataccgaaaaaccgtacgcccccacTA
CTCAGTGcacagtggcggcctggcagggggtggtGCAGTGCAGGATTTTT
GCTAAgtttttttagttctttcaggatcctgccgacgcaccggactgtcc
ggtgtatttgtctgATGGCAACAAGTATCATTTCGTTACACTGGACACAA
ttaccgtaggatcgtctaatctcgacatacgtcttgcaatctcgacaccg
gatctgtaaaataatcaaaacaaaccttgaatgaaattcttggtatcact
CTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggt
aacttgcatcagtggaggctaacatgcatatccctcaaatgaaagacacg
gctggtcattaaaatatgaaaataaatcaaaacaaaaatggtagagtaga
gctgcgagagcggagctgcgtatgtgtattttaatgaccagccaggtcat
tcatttgagggctatgcatgttagcctccactgatgcaagttaccctttc
tcacggtagtccggtgtcagtccggtgttgcatgcagggaattttggacg
ccggacatttatgaaacaaaaaattaagaaacaccggacgcactggactg
gtcatgtccggtgttttgattgtccggtgggaaaaaaatccttctccgac
accggacatctgACTTCCTTAAggccggtgtagaaattgtctgGTGGtat
aaaaaattctcattttacaccggactttcgcttGTCCGgtgtgcgtcggc
agggtcctgttcTTTCAGTTCCAATGTTCGCTTTGTTTTAAGATTTGAGA
TTGcgaattcataatttttagaaattagcttgttattttaacagttcaaa
tagttttctTTCATTATGCCAAGTTTCAAAGTCTTGAATTTGAGCCTTTA
AAagttatgaaagctcaaaattTGCTATTTTCCGCTATTTTGGgggtatt
tttgataaaaaatcccttaaaaacacaaatttttgttcaattttgccatt
aggcggtcatcgaaaaattgttctattcgcgtcacccgcccgcattaaat
tttccgctgattttccatTTCCCTCcagtgcggagatgcggaaaaaaatc
tgggaaaagcgaTTTGTtctttaaagtatagcttttttctcaattgctct
gacgaccatcaaaaaattgttttgctcgcgttaccactcgcccctgagtt
actggcgtgattaaaaaaatccgggaatgtttttgaccacCCGTCCGCCC
GCtcgcatttttaacacccgttgcgacgcgaacagagcattatTTCGATG
ACCACCTTAGGATAACTTATTGTACTAAATTATATATAATGAAACATCTA
TTTTATCACTTTAAATCACCGTGAAATTGATTCAATATGCTttaaccaga
cggtgtcaatcgcaTCGAAAGAATCGAACGCAAtggaataattgcaattc
gatccAATTCGGTTAGtataaaacgcaggtcacaggtcacaggtcacggg
tcacaggtcaaaggtcatacaaattacagaccggaaaactgtaacgcact
cgtaacatacaactcaGAACATAagctcctgaaaatattatatgtaatgt
aaatgtaatatcaaaatatgttatttagaagacttaaatgacaaatcatc
aaccccaaatattgacaacaaatgacacttaaattatgtaaatgatgatg
ttatctcaaagtatgaggttttgtacGCCAATTAgcaataaaatattctt
catgcataataggatgctgacactacaagtggatatagattgacaggttt
CGAAAACAAGAAATACTGTACTCccagagagctgttttagagagatgaaa
aagtgacgtcgttttatcaaaattacaaaaatgttgaaacatttataaaa
tataatctcATTGAcactattttcatcaattcttgttatcatacccaatg
tgatgcaggagataaaatgagatatgacatagtgattgtgaaatagctat
tttcctgatagggggctgtttaaagcaaaggtgagatcaatattcgaata
tttctttattctttgtatataacatacgtaacatgcgcataacattgaaa
agatattttgtttacatgtgtgatgtaatatataatacaagtattacagg
tccgtgttatacacggcataaaacgcgaAATCACGTGGTAAGCACTtggg
tagatttttagctttaaaatagttctagatcaataaaatacctttggaat
tatatttttgaaattaacaactgtttttcaaacattttctttgtgtttta
cagtaattgaagctgacctgtcaacattgacctgtgacctgtgacccgtg
acctgtgacctgtgacctgtgttttacactaaccggatccaatttgattt
aatcgcaatcaaactcattgaACATTGAACCAATGTAAttgccagacaat
ctcaattgaacggaatcgacgatcgaaccagtcgaacaacaatcgaacca
attgaatattacccagaattttggcgttcgattgtcgattccgttcgatt
gagattgtctggtaattgacaatcaatcgaacccagtcaggacctcattt
cactttatcgatattacgctaacggcagtgtgcgctaaataatcttggtt
tcgatttcgatttcaagcaaaggtcttagcaacagggcgcgcgtacatag
caacaggactgggtagaaaaatctaaacatagaattcaaaaaaaatgccA
ATCATCATATAGAGCAccaaaaaataccccctttctatgtttagtttgtt
ctaccttggattataactgaaaatatcttcaaaaaaaccttcgtccgcta
tcagccgcgcggtaatctttgtccgcttcaattcttagataatatgaata
agagaggtgcgcttagctaagctgtgctcgcgggcgataagcttatgttt
acttatcttgtatattttagtggtatttatccaatgaaaaggatgttgac
aaaatatgcacggcattgattatgaaaTCATTAAATACGTCAATGGCGAT
TCAACGCCCgctaaagaaaataattcgtaAATAGTTCTTTCTatcgggtt
ggtgtaatttaagatgcacgatctaacgatttacgatgcacgattcgcga
tctgtgcataaaatatgttaattcatgcgtgaTTATACTAATCATAAtga
aatatttaggcaatttataaactttcattcgctgaaactcaattattttt
aaaaacataatttatgtaagattatacaaattatatataaaaaaaatttt
cagtgcgTTTTCATAgattaaaagaaagtgaaagccacgtgcattcacct
tctgtactctctctttttcataacttgaatcaatataggggaattgttNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTTATGAtgattattaggaataatcagcatacttt
atgcatggatcgcgcatcgtgaatcgtaaatcgttagatcgtgcatctta
aattacaccaacccctttctatcttgaaatttagaaatacgaacaaaaaa
agatcaaatttaatatttgtttcctatctagattactatattagcgttag
aatacggtaaattttcacgaaaaatatttcgcgatggcgaTACGACCAAt
tgcgcccacgggaaagttccaatttttaattatcaggaaatcggggaaac
cggttcaccacgtggataaaaaacgtacggaatgaaacctgacagaaggt
tttcaaccagatttattcagataaagctataagaggttcattacttgtgg
attttaaaacctacataagcaaaacgaaagttgttgggaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNaaaacgaaagttgttgggatgGAAAGAGT
AAatgcaagacagaaggtttggttgtgttgatcaggtatgttattattct
atccgaactaatgttaaaaaagaccaaagaggtcctgactgatcaaacca
atcgaacatagtcaactatcaatcgaacattactcgaacgcaatcgaaca
caatagaatattacccaggaatcggccgttcgattaagattcgattacgt
tcgacaatcgaatcgcaaatattcgattggtttgattacgttcgattttt
gttcgattgacacggTCTGGATTTAAGCACTGAAAATCccaattttgaat
aattttcgccattttcggtcaattttgacctaaaaacctattattttaca
taattttcaTATATGGTAGAGCTATATTATTGTTATATATatattctaat
cctactttttcccAATTTGAAGGCTGTAGGTGGAaccccacctagatccg
cgcagcGTCGGATAGGCTATCTAtgatggcccagaaggctcattATTGCT
GCGCGCGAGAACATGACTGTGCACGAGAACATGACTGTGCACGAGAAATA
TGCTGTGCGAGCGAGAAAAGTATATTGTGCGCGCAAGAAGTATTTTGTGC
GCATGAGAAGTATATTATGTGCACGAGAAGTATGTTGTGCGCGTACAAGT
TGGAAATTGTGTGCGAGAAAAAAATACTGTGCGCGCGAGCAAAAATCAAA
GTAGATGTTTGATTATATTAATTCCACCCTTTCCGCCCTCCCTCCTGTAA
TTCGAGTCTGGAATTTATGATTCAAGTCTGTAGAATACATGCCCTCAAAA
CACATGTTTTTTGACTGATTTCAGCTTAAAGGgattatacggtgttatat
acacccgactcgtctaaaactgatgtcatcaaaattttaataaaagagtc
ctttcaaatttgtaaataaaaggaagaaaaaaatcttgctccacattttt
ctttattcattacaaaagattctatttatttcaatctgctgaatcaacat
acattttaactatgtaaaaggtcaatggctttaacAAGATTCTTCGGgaa
aaggttttcaaccagaatGAATGATGAATATTTAGTTTGCGAATATGAAT
GATGAATATATAGCCAATGATGAATATTTAGTTTGCCAATCAATCATGGA
CCACAGCAACCAGCAGCATGACCACAAAACCGCaacaacttttaacattt
tgTGCGACTTTGTCTATCATTTTGGATATGATTGTTTATCTTTGTATACA
TTTTGAGGATCCAAATGAAATTAACAGCGACACAATTTCAGGACCGGAAT
CATTATTTTTGGAAGTTAAACTATAAATCTTCTTTGCTAATATATGTCTC
CTTTGCTTTCGCACTAGACTATATTCTCTCGCGCACGATAACATCTTCTC
GCGCGCACAACATACATTTCGCACGCACGACATATTTCTCGCTCGCACAA
CATATTTCTCCCTCGCACAACATATTTCTCCTTCGCACAACATATTTCTC
CCTCGCACAGCATATTTCTCGCGCACAGTCATGTTCTCGCGCACAGCAAT
aatgagccttctgggccatcgtagctatctcccggaaatttagcaaaaaa
tcaggcaaaaaccctgtttttctcaaattttcgaaaatattgattttaca
AAACCCTGGGGCAAACggtcaattttgaagattttgaattaattttttca
cagaaAGTCTTAGAATAGATTAAATTACCCTTTATGGGTAAGGAAGGAAA
GATATATGGGTAAGCAAGGaaagatattggacgaggctttgtccagtcca
atatcttttcttgtagcccaatattttttatattggatgagactgcgtcc
aaataaatggtttattatccgttcatcATTAAAGGGCgcagaggtgccaa
ctctcacgcattggacGTGAGACTCACGCATTCCAACACTGTCTcacgca
atttttcaaaagtttgatttctcacgcatttttgaTNNtccccgattttc
cgattttcagaataaatttccccgattttccgatttttggagaaaaaatt
tttcccgattttctgatttttggaaaaatttttccgtTTTCCGAAGtcgg
aaaatcggaaaaatcggGTTAAGATTTCGGATCTTCATGAAAATTTTGTG
CTTTtgggcctggggacaagttaTAGCACGGTAAATTTGACCGACTAAAA
ACTCCGTACGGCCGACAATTGTTAGGGTGTATGAtgaaatgacttttttt
cagaatttcacTTTGGACAAATTTTTCTGGTAATTTAATCTACTCTAATA
CTttctgtgaaaaaattaattcaaaatcttcaaaattgaccGTTTGCCCC
AGGGTTTTGTAAAAtcgatattttcgaaaatttgcgaaaaacagGGTTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGCCCTGAAATTGGG
cctaaaatgttccttggaaaaaagtaggattagaatgtaacaatgatata
gctctatcatacatgaaaattattaaaagtaggttttttaggccaaaaat
gaccgaaaacgcgaaaaaatgaggttttgcctgaaaaaaatcctaaatcc
tgctgtgttggtgctacagCCCTGAAATTGGGCCGAAAATGTTCCTTTGG
AAAAAGTAGGATTATAATGTAACAATGATATAGCTCTGTCatatataaaa
attacaaaaaatgtaggtttttaggccaaaaatgaccgaaaacgcgaaaa
aatggggttttgcctgagaaaaaatcctaaaatctGCTGTGTTGGTAGTA
CAGCCCGCAAATTGGGCCCATAATGTTCCTTgggaaaaagtaggattaga
atataacaataatatagctctatcatatatagaaattacaaaataataGG
TTTTTAGGTCAAAATTGACCGAAAAAGGCGGAAATTACTCTAAATCAAGA
TTTTCTGTGCTTAAAGCATATTGAATCAATTTCTGACACtcttaagtgct
ttaaagtgaTTAAATAGATGTTTCATTATATATAATCTAGTACAATAAGC
TATCCTAATGGCAAAATAGCGGAAAATagcgatttttgatttttcataac
ttttaaagGCTCAATTCAAGACTTTGAAACTTGGCATAATGAAagaaaac
tatttgaactgttaaaagaacaaactaatttctaaaaattatgaatCTCA
AAACTCATTCTCAATCTAAAATCTTAACACTAACAGAGCGAACCTTGAAC
TAGGGGATCCCTAGTGCATGAAGCTAACGCCTTATACCACTGGGCCAACT
TCTGGACATGCGCTGGCGAAATTTCTCAGGGATGTCTTTCCTTTGCTAGT
TTAGAGCTCAATAGGGACCCCTAAAAGTATTTTTGAGACTTGGCTGGTCT
GATACGAGGTCTGACCCCGCCCCCTCTAGAGCCTTCCCATGAACTTTTTA
GGacttcggacctattttttcgggaTCTACatcaaaaaaacgtaaaatat
caaaacctggtaAAAAATTGGGACTTTGACCCAAACCAGATTGGATTCGA
TCAGGGGAACTTTGGACCACTAGGCTAACttcccgggggaggggggtact
taggAAAATGAAGGGTACTGTATGTGCtgcaaatttcaactttttacctc
tggaaagaccaaaatttggtcaaatttttcacaaaatgttcctttgtttt
ctactttttagtcccggtaaggatCTGAGGGTCGAAGGTTGGgttgcaac
cctagtaccccggGGCTAACTACTACTAATCGCACGCTGGGAAATTTTCT
CAAGGTTGTGAGGGCTTGCTAATGAGCCCTAAAGGGcccttagagcattc
ttgagACTTGACTAAAGCTACAAAAGTAAATAAAGCACCACCACCCAAAA
GCATAGCATAGCATTACTagcattactggaagaaaaataaaataaaatct
ccACCTCCACTCCACGCCATGCCACTGGGAGTTCCCAGGCAGTCCcacat
ccaagtactatcccagCCCGACCGAGAGGTGctttcatcctggtatggat
GTGGAGtatgcctggagtgctttttctggCTATTTATACCTTGTTCAAGG
TgccgactaagcagtcaggcaaagttcccCAGTGGGACCaattgaggcct
ctacagccccCACAGCCCTTTGGAGCCCTTTGGGTACCCTCTGGCTTGCT
CTCCCTCAAAGCCAGCATCCTCCATCAGTCctccgaagcctttaaaaggc
ttgaaaattggtgaaaattcgtcaaaattacCTTCTTTTTTTTAGTCTAT
AGTGTACTGTAagtaacacgaacaaatagtacaaaactaaAGATTTctaa
cctcccgcaaaaggaccaccagatcataccgccaggaggaaggaacctTT
ATAAGCTAACAAAATGAACAATATAATgattaataaatgaaaaaaatgac
ctcctttgggtaccactGCAGACGGCCCTTGGGGGTCCTGACTGGGGTCC
CAGGGGCCTGAccggtgcccactggtcagggggcatgtgagggtacacgc
ctgcaccagtgtgggtccttcaaagttcctcaaagtgtcgtcaaaAGCCG
CCAAAATCGTTCTAACTCactccgtggaccgatttcgggcCATCCCGGAC
AGGGAATGGGGGTCCCCAAATGGTCTTCCGGACCTGGTCCTGAAAGGGTG
GCACACATACTTTGCATATCGACaggtttggatgtctggggggtccCAGG
GGTCTTGCTATAAAGGGATTTTCGCATGCataaaaatcgccattttggcC
CGCTGGAaggccctgtccgggtcaggtCCGGGCCATCGGGGATCGTACAG
GTGAAGACTGATGCACTGCGTCCATCCCAGCCCATCAGAACATTACATTA
GCGAAGGCTTCAGCATGCCattaaaaccggagatttagaaagttggtATA
AACAGTTTTCTGGGATTCCttccggacttttgccgggccttcCGGGCTGG
AATGGTAGAAGTtacccttctgctttgctctcagaccgttttcaacatta
aggaaggcttacaggacttttgggggcctccagaccgagctatggttacg
gtactctaAAAAACgacatttccggactttcctgagccgggaaaagccgg
tgtAGTGCCCCAagcgacccaaatcgccggtctttggACCCaaacatctt
ttccacttttcaagTTCATTATAGaaagccttgggggccttgcagaAGCC
CCCAAGGGTTTCAGAAAGTCGCCAGTTCCGGaggcttgccggggagttcc
cGATGCCTCCGaaaagtatattaaagtataaAGTATAGTATAGTAGTACG
GACAATTACGTGAACTAGACCAATCATGTACTATTGTACTGCCTGTAGCT
GATGAAAATAGATAAATATACGGACAAATACGCACACTAATTGGCATATG
AGTTTTGATGTATTATATACAGACAATTACGCAAACTAGTTGGCGTATCA
GTTTTGGATGTATTATATACGGAAAATTAGGCAAACTAGTTGGCGTATCA
GTTTTGGATGTATTATATACGGAAAATTACGCGAACTAGTTGGCGTATCA
GTTTTGGATATATTACATACAGACAATTATGCAAACTAGTTGGCGTATTA
GTTTTGGATGTATTGTATACAGACAATCACGCGAACTAGTTGGTGTATTT
CCagatattctcaacttcagttgagctacaatctgacaatgtctgtgtgt
gtgtctgtctgtgtgtgtgtctgtctgtcacaaaaactttagggcagcct
ggagacttcaaaaatgcttggatttggctgagatttggcacacttgttcc
ttgggtgaatatctgggggtgattttttcattttttgaaaattttaattt
ttggggcctgggggcgagtttttcgccaaaacgaggctaaaactttgggg
tagactggagacttcaaaaatggtccgatttggctgaaattttgcacact
tgatccttgggcaaatccctgggttttttctttcattttttcaaaatttt
aatttttggggcctggggacgagtttttcgccaaaacgaggctaaaactt
tggggcaggctggagacttcaaaaatggtccgatttggctgaaattttac
acacttgatccttgggcaaatccctgggggtgttctttgattttttcaaa
atttagatttttggggcctggggatgagtttttcgccaaaacgagggtaa
aactttggggcaggctggagacttcaaggGAGAATCCCTGTGGGtggttt
tcattattttataatttccaTTTTAAGGGGGTGGTCATGAGTTTTTAGTT
GTAATTGGTTACAAtcttacaattgggcctacgaatgatttaaaaacact
gaagttgagcccagtgcggttagcacgttcgacagtatTATATAGATATC
AATATTACGCGAACATGTTGGCGTAATTGTctgtatatataatataaaat
tagTTGTTGTAATAGTCCGTATATTATAAATAGATATTGTTAGCATAATC
TGATATGCCAATATCTACTTTCTCTTGgtagtttttttattcaaaagtct
tgTATTTATTTTGTGACGCaatgtcaaaaagaagatgctcaactgtcatt
gaactcgttgtgtgacgtcaatttttgaaatatatatgTAGCCTCtatgg
aagctatatattcgaaaatattagacagcaaagaagccaatcaaatgtca
cTATTTACGCGCATCAGTAATACTAAGCAGAtatattgggctattccatt
gaTTGGGCGTTTCAAGTTATAGTCAGTTACCCCCTTGTGGACAACATGGA
TTTTCtgtaacaatttacttttgatccaagctcataatcttagaaaaaac
aaaaagtacctcacctcacaaagttctaagattatagagcttggtgcagg
tagattagtctgacacagaatgttataatttataaacagtctgtgtgtga
gcCAGCTTTTTCCATAAGTTATgcatgcgcgcgcatcgaaattatcaaaa
tgcgcttGAAAGTACTGCTatgtaatacgccgaaagctggccaatcaggc
agaacctgcattgcagggaaaaatttCCCTGCaggcgccaagcgttaaac
aagcagcaaaaatatcataaactagactgtgaacaaagtttaacgcttgg
attcccaggctagatttccgtaacattcaagattttttatgggaaaatct
TGGATTTTACAATACtgtaccataagttggtctaatcttgacatccgtct
tctaatttcgacacccttctttagagataggaataatatgaaagctgaAA
TTGGTGATTGAAAAAGAACTAAGCAAGGAAAAATAGTTTCgacctttcta
ttattttcagcTTTAGAAAAGGATGTCGaatttagacgagggatgtcgac
attagaccaaaaaaataaaataaagcaaATTTCATGGATTTTCCGATACA
TATGACTAAATAATGAGGAAAAATCCTGGATTTTccaaaacctttttcaa
atttctcaggatttccaagtgaaaaaaatccaaaaaaacctgTCGTCCAC
AGGTGTAAAGTGACTtttaatcaaaatatatttctaaaacaaaaataaaa
agtacaaaatttaatttataaatcatgaaacaaaaaatttgttgCACCTT
GGAAATAGTGTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTAGGCTAGCTAGACTAGGctatattt
attcatttattttattttagtatGTTAGGCACACCTGGTTTCCATGGCCT
CATTTTCAGTATCATGTCACAGTGCGAACTCAGTCTATTTAAGGCCTCAC
TTCAGTCACACCTCAGAGCTACCATTTTGTGTCATGTCATGCTGACTGAC
CATAATGGCATCATAATTCATAACCATAAGGCTCTAACCTTTCCTCTGTC
ATTTCCTGTAACGCCACAACAGGGGGGTAGGTAAAGGACCCTCCCCGAAA
CGTTTTGTTCATGCTTCTGAACACCGGAAGAATCCGGAGCACTTCCGGTG
TTCTGGAGGTAGATTTTCAGCAATTGGTCTACACTGGCAGGCTAGCTCTa
ataaaacagcatctaataacatgatatgattcttcaatgggaatcaaaac
tataaagtgcacttacaaacatcaatatatcagatctaacaaaatgaata
acggcactgtcatcattgacaataaaatataagattttctgtcaagagtc
ttgtaaacattccaacaacttccatcgaaatgatcagtcacagctgagtc
taccatttttaacacggtTTGAGGATCGAGCCAAGGATTGAGCCAAGAAT
GCTCGCAGAACGCTTGCAGAACGCCCGcgggtgaaaaatttaatctgttg
atcattttctcaagcaaagagtatgcgaagcgattctagcagACCAttag
tggatagtattcaattatcattatccttttattttcatttctagcaCTTT
TGCAAAggaaaggaaaaatagaaaagttgtattttttactgctcttttca
catactgaatttgaaagatcttctatgtggtgtttttttgcaaactgcaa
aaaactgatttttgtcctgcttttGCAGGACTTCAGCTTAAGTGCTGGAG
TGCATTATgtgcatagggtacaaagtccaaatatgtgtttcccgtaattt
ttgtatgaagaggtGCTAATGGTGCTAATCATGTGAAAACTAACTGCATA
CGCGTGTAAGAAATCAGCTGACTCATGGAAGTGAAACCttgtgtttttaa
tttttttgatatttctacCAGTGATGCTTCCGAATGTAATATCAcgaatt
caatttcattaatggctTAACCATCATATCAatatttagaatattttttg
taaccatGTTTAAACGGTTTTTTAGAATGTGTCAAAAATCACTTGCTCCA
GAAGCACCGGAAGAGCTCCAGAACTTTCCcgagagaaaaatagtgttttt
tcgtgatttggaaaaacctgcacttctgacccgcaaaatcgaggacggta
aaagtgctgatttactgtCGTCCTAAGTTGGTCATgctctagtcaaatta
gaaccttaccgtctccgtcgctgaaaaacacacataatAGTAATCTGGGG
CAAATACGGGACACCCCTAAAAACTGTGTTATTATTATAAATTTGGATTT
CAGACGGAGAGGACTTTGGAGTCATTCTATCTGGTAGAAAAATGTCTAGT
TAGCTTATTCTAAcatatacttttgatgtttcaacaaaagtttCACGTGT
Gaccataaaaatcaattttcatagttttagaaggaacttttctatttttc
aagcTTTAGTGTCAGGAAGAGCTGAAATcactttgattatattttgactg
aattcTGACATCAAGATACTATGGTTTGAGATTATAATTGTCTCATTATC
AAACAAGGCACCTTATCTCTAAAAAGTGTTTCTCATATTCACCCCGTAGT
CAAATCTTAATTTTGGGGTAATTATGGGACACTAAAGACTAAAGTTTGAG
TTTgaagtgtttattttttataagaaaactacaaacttgattttctaatt
taatGGAATCATAACTACACTCTAAGTCTTTCAAAACCTGCAAAAGTTTG
CATCTAAATTAATTCAGTTGGTCTGGATTTCTCTATACAAATATTACTGT
TTTGGGGTAAAAACGGGACAATCTCAGTAATTTCGTTGAAAGTCCTTTAA
ATAATAGCACTTGGATTTTAAGTCATCAGTCAATGCAGAACCTCAAATAT
CATGaccttttggaaagatatctggatttttcaataacattttatacctg
TCCCATATTTACCCCAAGGGTGTCCCTGAAAtgtggggtaattacgggac
acctttaaaataaattttaggaaCATCTAACTTTCAAGGAAAAGTAATAC
ATCTTGTGTAAAGGTCATACTTTgataaataaaatatcaaaagatcaGAT
CTCTAGGATTAATACTTTCAGAGTAATGCCCAAATAAGTCAAAATCGTCC
TataattaccccagatgactatatgttgaataagaaaaaaatagtgCACA
TTTATTGTATTTATGCATTAATGTGTCATCGTTTTCAATGCTAgagtttt
tgattgtttttgctAGAGTTTGCCAATAAATATACTATAAACTAAAGTTA
ATGAACTAATTATGGAAAATcaatttataaataaataatatgtcgaaaaa
attgacctatcaatTCTCCCTAAGAATCAATGTTAcgttgttgaatttct
ttttttagatgAAACCATGTGTCTGTTCTTTACATGATGCTCCTGAGCAT
ATCAGAAGTAACAACATCTATATTGAAAATGGATATCGTAAAAACTTCCT
ACATTATAAACAATGCCTCAAAAGTATTTTCATGTTAACTAATGAGACTG
TAAATATTTGGTCACATTTGCTTGGCTCAATTTTATTCATATTCctgatt
ttttcaataaatgatTTTTTGCGTGGCCTTGAACATGCCACCCAGATTGA
TCATTTAATTGTGACAGTATCATGTCTAtgctttttgttttgcttggtCT
TTTCAACTACCTATCATATTTTTAAATGTCAGTCCAAGGAATATGCTGAA
TGCTGTTTACGAATGGATTTTACTGGTATTAGTGTAAGCTTGTGTGGTAT
TTATCTACCTGGCTATTATTATGCATTCAcgtgttttgatttttggagaa
TGTTTTATAGTGGTCTTACATTTATATTGATTATTGTAACCGTATTATTT
CAAGTATTGCCAAGAAGAATATACATCGATAGATTGGATCGTAAACGAAT
TGCTTTGTTTTCTTTCATGGTGTTATTCGGCATTATACCAGCATGTCATT
GGGTGTATCTTTATGGCGGTCTGTCAAGTATTTTCATCCAAACATTCCTT
CCAAAGATATTTGTTATGTACTTGATTGTTGGTTCAGCATTTTTCTTCTA
CATGTCTAAAATTCCAGAAAAATACAAGCCAGGattctttgattattttg
gtGCAAGTCACCAGATATGGCATATATTGATTTTATCTGCTTTTGTCTAC
TGGTATTGTTGCTCCTTTGAACTTATTAAGTATATTTACAGTAGAGATGG
ATTTTGTAATTTGTAAGGATGGGCGtagtatttatttttgttagtatttt
ttgtccatttagACGAACTAAACTTATTAGTTACTGTGATTTAATTAGAA
TTCTTCTTCTTTGTTCTTTCTTCTTGATTTACGGAAATGCATTTTTATGA
GAAATataaaaagatttatttcaagattggctttttaaaaaacttttttc
agtttatttttataaaagattATTAATTTAACtatcattcattttttttt
ttaattttatttttgtaactttactactcaattttttttactacTCAATC
ACAAACAAGAAACACCCCTATAAGTCATTCTctgtttgaaaattattttc
tttagaaattggCTTGAAAAAGGAGCAATGTAGATTAAAGTGCGAAAGAC
ACCTCCAATTATAATTGTGAGTTTGGCAATTTGACCTTCAGCTCATTGTT
GAAAACTTTTAAGACATTTTGCTCAGagagttatttttttaactgataga
ttttaatctttaaaaagattctagatcaataaaatacttttagaatgata
tttctaacaattacaagtgtttttcaaacattttttaaggcaattaAAGC
TGATCTGTGTCCTGCGTCCTGGGTCCTGCGTTTTGAAACCAACTGAGGAA
TTCTTCTTAAAATTATTAGAATGATCAGGGGTTATAATTTTAATTAGAAC
TGTAAATTATTATTCAtttgtcagaaaattgattttattaatcATAGTAT
GTAAAATTATaggatatatatatatatatagctggattaatttcaaataa
ttttataatatCAATAGCAAATTTTTAGAGTAGTCATTTAAACAGATTTC
ATTCAATAGAAAATAGATAATATTCTTTCAAGACTATTAATTAATAGATT
TAAAGGCTGATTTAAAATCTAACATTTTTCCATAGAGTCTTATAAATTGC
ATACTTTCTTAACCCTTCAaattattcattaaaaaatagtATCATAAGCA
TCACCTGAAAGAGAAGGAATTTCTCATTTTGTGGTGTATCAAATAATAAc
tgtttacaaatatttttatctataTAGAAAATGCAAAATATacgaaatca
aaaaacaaaactgACACGTCTATCGTCTACCTTATTGCAGCAACGAAGAT
GCCTTAGTCTAACAGCGCAACACTTAAATAATTGGAATCCCGTTATACGA
AAACGTAACACAGACGTGGGGAAACATGTTTTTGAGGCATTCTCTGTTCG
TACATTGATAGACCAGCATCCAGAGCTGAATGGTGGTGAAATCCACGATG
TCACACAAGGtagtattttgtatttttgttatttttatataaGGCTAACC
AAAATTctatcaataaaatcaaagaacACCTTTCTCTGTTCAGACATTTC
ACCCTTAAGAAATGAATATCAaaatatctttttcttttgttctatgcCGA
TGGCCTTCtagttttgcttttctttgaCTGACAATATACTTGATGGGTTT
GATGTTTCCAAATAGGAAATGTCTAATATTTTCAAGTCGAGGCGAGGATC
CTCAATAATCTCAAATCAATAGTGCACCGCACTgaattttaaaatagatt
ttatttttgacataatcattactctcgatgtgtttgtacgagccAAGCCC
ATCAACAATCTTTGCGTTAATCTGTTTTGCGCGTTTATTGCATCACTTGA
CAAAAGATACataacaacttgcacgtatctttaattgaaccacattgaat
tgtgggattgtaACTtgtacaaaatatcaaaaagtgaaaagtaatgatta
tgacgtatgcgttgcggagcgctacTAAAGGAAGATCAAGATTAATCGTA
ATGGTCCACACAGTAAAAAGTGCGTTTTGATAGACTTCGTGTCGTGAGTT
TTTTAATTAATATAAtaatatgaatatttttcacAGGCTTGGTCAAAACA
GAGATGCTGGTTGACAAATTGCAAGATTCATCTACTTTGCCCTCTTGTGA
AGCAGTGGAAGATattttcagtaaaattggtGAGCTAAAATTACAGAAGA
ATGTAACAGAGCTTGATGCAGTTTTGCgtgaattttctgaaaaaatcttt
gatGGTTTATCTCAacgtgaaaaattatttttgatgaaaacacGACATCC
AAAACACATTTTGAAAACAATCTGTAATTCTAAGAACATGGAATTGACAG
TTGAAGTTGATTTCGATTGTGATGAAAGTGAATGTATAGTATTTATCACT
TGTGGTGACAAAGAATTACAAATGCGCATGCCAAAAGATAAATCGATTGC
TGAGGTTGAACATGACGTTTGTTTGTTATTACTTAATGATCATTTCTCTG
AGGAATTCAATGCTTTCAAATTCCGACTTTCTGAAGTGGTTGATGAAAGT
ACGATTCTATTGAATCCGAAAGCTCCGGTCAAACGTGAGGTTTCATTGCA
GAAAATATCTGAAGAAAGTTTTGGATTCACCATCCGAGGGGGAGAGCGTA
AAGCTGTACGTAATGATGAGTATCTGCAACAATATATCACCACCCCAGTG
TTCATTTCTGATATCATTGCTGGATCACCAGCAGAGAAAGCAGGGTTAAT
GGTGGGTGATGTACTATTAGCAGTCAGTGATCACGTCTTACAAGATATGG
GTCATCAACAAGTTGTACTATCTTTGAAGAAGTTTGCCAATGTCTCTAGC
GTTACTTTTACTGTCAAACATTCTAAACAAGAAGTCTTGAAATATGAAGC
AGAGCAACGTTTTATAGAGAGGCAGAAAGAGAAAGTTCGAGAAGAGATCC
GATGTAAGAACATGAGTAAATGGCATGATGCCAAAGCTAAGTTAGATCCT
GAAGAGTATCTATTGGAAAGattgaaagagaagaaaaagacATACGTTGC
CAAGAAGCCTCGACAATCAAGACGCCTTTGGGATTATTAGATGAAGATTT
TTTAGGcttagatcttatttttttgtacTTTAGTTTTTACGAGAGAAAAA
GGTGTCTATATTTCCAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001533XLOC_001533Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002811-exon-sc0000023-1491911889:590519..590567TCONS_00002811-exon-sc0000023-1491911889:590519..590567Clytia hemisphaericaexon
TCONS_00002811-exon-sc0000023-1510915933:590519..590567TCONS_00002811-exon-sc0000023-1510915933:590519..590567Clytia hemisphaericaexon
TCONS_00002811-exon-sc0000023-1575043694:590519..590567TCONS_00002811-exon-sc0000023-1575043694:590519..590567Clytia hemisphaericaexon
TCONS_00002811-exon-sc0000023-1491911889:608359..608527TCONS_00002811-exon-sc0000023-1491911889:608359..608527Clytia hemisphaericaexon
TCONS_00002811-exon-sc0000023-1510915933:608359..608527TCONS_00002811-exon-sc0000023-1510915933:608359..608527Clytia hemisphaericaexon
TCONS_00002811-exon-sc0000023-1575043694:608359..608527TCONS_00002811-exon-sc0000023-1575043694:608359..608527Clytia hemisphaericaexon
TCONS_00002811-exon-sc0000023-1491911889:609155..610237TCONS_00002811-exon-sc0000023-1491911889:609155..610237Clytia hemisphaericaexon
TCONS_00002811-exon-sc0000023-1510915933:609155..610237TCONS_00002811-exon-sc0000023-1510915933:609155..610237Clytia hemisphaericaexon
TCONS_00002811-exon-sc0000023-1575043694:609155..610237TCONS_00002811-exon-sc0000023-1575043694:609155..610237Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:590519..610237 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.06706e-07	0.493772	0	1.85517e-05	0	4.32451e-08	0	0	0	0	0	0	0.406699	0	0	0	0	0	0	0	1.30262e-06	8.00712e-08	0	0	0	0	0.00211928	1.35411e-08	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002811 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top