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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002795 ID=TCONS_00002795|Name=TCONS_00002795|organism=Clytia hemisphaerica|type=transcript|length=276bp
CAGATCACATTTGGGTCAGTCATCTGGTTTCGAAAGTTTTCAATTTCGAA
TGATCGAAAACAAGATTGGCATCAAAAACGAGAATCGCATTCTAcacaac
caaaaacattacaGTGAAGTGTTCAAGAAAGATCCTGAGACATTGGAGAA
GATTGGAGATACGGAAACTAAAGAATCTCTCTTTGATCACGTCAATGAAT
GGTTAAAAGAGCTTTACGAAAACTCAAATGAAATCGTccaagatttttta
agcaatttttcGAAGGCATCTACTAG Run BLAST on NCBI transcript from alignment at sc0000023:100953..102343+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002795 ID=TCONS_00002795|Name=TCONS_00002795|organism=Clytia hemisphaerica|type=transcript|length=1391bp|location=Sequence derived from alignment at sc0000023:100953..102343+ (Clytia hemisphaerica)
CAGATCACATTTGGGTCAGTCATCTGGTTTCGAAAGTTTTCAATTTCGAA
TGATCGAAAACAAGATTGGCATCAAAAACGTAAGCGAGCAAAAAGCgaaa
tttcatgttttcataCATTTTCGTTAGCCATACTCAGAGCTGCATCGAAG
TTTACTCTTGTACTGCTGCTATATTTTTCAGTTaacttgttttttgtaat
tggCACAGAAATTCCTGAAAAAACAGTcagtattttggtattttggacTT
CATTGGAGCCGATAAAATTATTTGTACAACCATGTCGATTTGGGAACTTT
AGCTGGGACATACTCGGCACCTTGCGAACTTAGTATCCCAAGCGGTTCTT
TCATCATTACGTCTTAGGAGAATCGCATTCTAcacaaccaaaaacattac
aGTGAAGTGTTCAAGAAAGATCCTGAGACATTGGAGAAGATTGGAGATAC
GGAAACTAAAGAATCTCTCTTTGATCACGTCAATGTAAGAGTGAAAGTGA
AACTAAAGTCAGCTTTTTGCTTTCATAGGATCAAAAGAATTAGTAGTGAG
TTCATGTATCGGAGGACATTGACATTGACGGTAaatgaaattgacaaaaa
ataaagTCGATAGTTGGTATACCTATACCTtgtttgctcacctaaacaaa
cgacggtattttggtgtttttaccgtcgttgCGCAAAGTGGGCGGCGATT
TTGgtgacatgtcaactttgctttatatcgtctccttcgatttatctcga
atacataaactcgctattaatTCAATCAAGATGGCGTGGTAGACGTGGTA
GAGTGCAAGTTTACTTCCCTTTCAACGTTATTTGATAGTTTTAGATACTC
TAAGAAAATCATAATGAGGTCAGAATAAAATGGTTAGTCGGCAATTGGTT
ggtttcatattttttattgtgCATAAGGTGCGTGCCTCCTTCCTATATCA
TAAGAAATaacaaccccttctcacagacccactgggaccccttcccactg
gaaaaactgGCCAGAGTtccgtccccagtggaaaattatacttcaatttt
tgtccccactcaaaataatcaaataaactaatCTGCACTGCAAACTATTA
TGCTATTTTGCCCATCCCCAATGAATTTAAATCCCcgcccaaaaaaatat
caatccgtATATAGAATAATGATAGTTTCAGTCTATCATTatcatcccca
ctggctgaaaatatcctactgggtctgtgagaaggggtttgAAATAGTAT
CTTTAACTAACCTTATCGTCTTATTTAGACAGAAAtgattaaatttaatt
ttccatTTAAGGAATGGTTAAAAGAGCTTTACGAAAACTCAAATGAAATC
GTccaagattttttaagcaatttttcGAAGGCATCTACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002795-exon-sc0000023-1491911889:100953..101031 | TCONS_00002795-exon-sc0000023-1491911889:100953..101031 | Clytia hemisphaerica | exon |
| TCONS_00002795-exon-sc0000023-1510915933:100953..101031 | TCONS_00002795-exon-sc0000023-1510915933:100953..101031 | Clytia hemisphaerica | exon |
| TCONS_00002795-exon-sc0000023-1575043694:100953..101031 | TCONS_00002795-exon-sc0000023-1575043694:100953..101031 | Clytia hemisphaerica | exon |
| TCONS_00002795-exon-sc0000023-1491911889:101320..101436 | TCONS_00002795-exon-sc0000023-1491911889:101320..101436 | Clytia hemisphaerica | exon |
| TCONS_00002795-exon-sc0000023-1510915933:101320..101436 | TCONS_00002795-exon-sc0000023-1510915933:101320..101436 | Clytia hemisphaerica | exon |
| TCONS_00002795-exon-sc0000023-1575043694:101320..101436 | TCONS_00002795-exon-sc0000023-1575043694:101320..101436 | Clytia hemisphaerica | exon |
| TCONS_00002795-exon-sc0000023-1491911889:102264..102343 | TCONS_00002795-exon-sc0000023-1491911889:102264..102343 | Clytia hemisphaerica | exon |
| TCONS_00002795-exon-sc0000023-1510915933:102264..102343 | TCONS_00002795-exon-sc0000023-1510915933:102264..102343 | Clytia hemisphaerica | exon |
| TCONS_00002795-exon-sc0000023-1575043694:102264..102343 | TCONS_00002795-exon-sc0000023-1575043694:102264..102343 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023 | supercontig | sc0000023:100953..102343 + |
Blast
The following BLAST results are available for this feature:
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