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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002793 ID=TCONS_00002793|Name=TCONS_00002793|organism=Clytia hemisphaerica|type=transcript|length=656bp
AGTCAATACACCCAATAAATAAGGCAAAGTGCTCTAGTTTGCAATTTCTT
TGATAGAGTTGACGGATTTACTAACCTCTGGCTTAAAAATGCTAGAGATA
TTTAGCTAGTGATGGTCAGTGGACTAAGAATGTCCtgagtgaattttttt
agaaaagtcaATTAGTGAGGGAGTCTACTGAGATCCAAGAGTATCAAtta
cttcttttttctttgcagCTTTCCAACAAACAGTAATTACGTAGACATGT
CCAAAGCAATAATTGAGAAATTGACCTATTTGATCAATTCACATCACAAT
CATGAGGATGCTGTAAACTTTTAAAGAGAAGAAGGAGAAAACGACCAGTC
ACAGGAGGAAAATGATCATTTCCACATATCCATTGCTTGCCACAAAGAGC
GAGATCTTTCTGAGTTTGGTTGGAGGATGGTCCACCACCAGTCGGTTGGA
AACCATAAAGAATATACCCATCCTTCGTATCACTACAACGGTGGAAAAAA
ACTACTTAACCAATGTTAGAGCAATGCTAGCTGGTTGTAAAACAGAAGAG
TCGAAATTATatgtgAAGAATTGTTTGAAACTGATGTTAGTTTCGTTTCT
ACTTAGAGAAAGTACTTTTGCAATATTTGATCCAACAAAAACGtatccaa
ggctgg Run BLAST on NCBI transcript from alignment at sc0000023:20009..21734+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002793 ID=TCONS_00002793|Name=TCONS_00002793|organism=Clytia hemisphaerica|type=transcript|length=1726bp|location=Sequence derived from alignment at sc0000023:20009..21734+ (Clytia hemisphaerica)
AGTCAATACACCCAATAAATAAGGCAAAGTGCTCTAGTTTGCAATTTCTT
TGATAGAGTTGACGGATTTACTAACCTCTGGCTTAAAAATGCTAGAGATA
TTTAGCTAGTGATGGTCAGTGGACTAAGAATGTCCtgagtgaattttttt
agaaaagtcaATTAGTGAGGGAGTCTACTGAGATCCAAGAGTATCAAtta
cttcttttttctttgcagCTTTCCAACAAACAGTAATTACGTAGACATGT
CCAAAGCAATAATTGAGAAATTGACCTATTTGATCAATTCACATCACAAT
CATGAGGATGCTGTAAACTTTTAAAGAGAAGAAGGAGAAAACGACCAGTC
ACAGGAGGAAAATGATCATTTCCACATATCCATTGCTTGCCACAAAGAGC
GAGGTGAGATATTCTTAttaattttataaatttcttattATTTCTTATTA
ACGATTTCCAAGTGTCTTGTTGCACTATTAGAAAACNAACGACCAGTCAC
AGGAGGAAAATGATCATTTCCACATATCCATTGCTTGCCACAAAGAGCGA
GGTGACATATTCTTAttaattttataaatttcttattAACGATTTCCAAG
TGTCTTGTTGCACTATTAGAAAATTGTATTCAGGGGTCATCTTTGTTATC
ATTGAATTATAAGTACTCCAGGTCTCTAACAGACGGGGGtctggaataag
cagggggttggaaaaattaaTTGCCTTAAAAAGGACTTTCTTTTTCTTAG
AAAGGGGTTGATATCCAAGAATTGAGGTGAAAtgaggaatttttcaaaat
attttttcaaattttgataagcTGGTAGGGTGGTTTAAGAATGTCTCAGG
TGGAAATTTGCGTTTATTTAGATACCAGAGAGTATTAGCCAATTCCCAAA
CTATCTGAGATCTTTCTGAGTTTGGTTGGAGGATGGTCCACCACCAGTCG
GTTGGAAACCATAAAGAATATACCCATCCTTCGTATCACTACAACGGTGG
AAAAAAACTACTTAACCAATGTTAGAGCAATGCTAGCTGGTTGTAAAACA
GAAGAGTCGAAATTATGTAAGTAATTTGAAACCCTCCgcatgaaaagttt
tttcagagggaatttattTCGCGAATTGGTAATAATAGAGTTATTATGGA
ATCCCGTGTAATTATAGGGCCAAAATCAGGGTGAGAACACGCATAGGGCG
ATTTCTGCACGTTTGTGATTTTAGAGATCTTTTTTTTCTGTTACATCTAC
AGAAAAAATCTATATATAATAAAATCCTCATCAGTCATGTCgcatttttt
aattaattattatttatctttttctttgcaaaaaataACTATTTTGACTT
TGGATATTGATATCTATTGAATAATCAAAGAGCTTTCATGATGTAGTGAT
TCAATCAAATTTCACAAGATAAACGTTTtagaggattttattttatatct
ttttttatccactttttccggacaccctatATAACCCCTTAGTGACCTCT
GGGCCAAATTCTAGCCTAAGAcccttttttgttgaaattctacaggatta
tttgtttttaaaaaatgtacagcacttaaataagaaaatttactACAACT
TGATTTAtcgtttctttgttttttttttagatgtgAAGAATTGTTTGAAA
CTGATGTTAGTTTCGTTTCTACTTAGAGAAAGTACTTTTGCAATATTTGA
TCCAACAAAAACGtatccaaggctgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002793-exon-sc0000023-1491911889:20009..20411 | TCONS_00002793-exon-sc0000023-1491911889:20009..20411 | Clytia hemisphaerica | exon |
| TCONS_00002793-exon-sc0000023-1510915933:20009..20411 | TCONS_00002793-exon-sc0000023-1510915933:20009..20411 | Clytia hemisphaerica | exon |
| TCONS_00002793-exon-sc0000023-1575043694:20009..20411 | TCONS_00002793-exon-sc0000023-1575043694:20009..20411 | Clytia hemisphaerica | exon |
| TCONS_00002793-exon-sc0000023-1491911889:20918..21074 | TCONS_00002793-exon-sc0000023-1491911889:20918..21074 | Clytia hemisphaerica | exon |
| TCONS_00002793-exon-sc0000023-1510915933:20918..21074 | TCONS_00002793-exon-sc0000023-1510915933:20918..21074 | Clytia hemisphaerica | exon |
| TCONS_00002793-exon-sc0000023-1575043694:20918..21074 | TCONS_00002793-exon-sc0000023-1575043694:20918..21074 | Clytia hemisphaerica | exon |
| TCONS_00002793-exon-sc0000023-1491911889:21639..21734 | TCONS_00002793-exon-sc0000023-1491911889:21639..21734 | Clytia hemisphaerica | exon |
| TCONS_00002793-exon-sc0000023-1510915933:21639..21734 | TCONS_00002793-exon-sc0000023-1510915933:21639..21734 | Clytia hemisphaerica | exon |
| TCONS_00002793-exon-sc0000023-1575043694:21639..21734 | TCONS_00002793-exon-sc0000023-1575043694:21639..21734 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023 | supercontig | sc0000023:20009..21734 + |
Blast
The following BLAST results are available for this feature:
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