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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002781 ID=TCONS_00002781|Name=TCONS_00002781|organism=Clytia hemisphaerica|type=transcript|length=916bp
GGAAGAGACACTAAGAGCTATGGAAAAAGCTGAAGGGATAGTTTACGAGC
GTTTATATGTCCGAAGGAGTTCAGGATCAAGCCCTAGTGGACGACTATAC
GAGATCAGTGAAACCATAAAAGAGCTTCCCTCAGCTATTACTTCTGGTTT
GGAATGGGCAAACTCCAAACGTAAAACACGACGTAGAGGAAGTGCTGACA
ATTTGCTGATCGACAATAATAATGATGTTATTGAAGAACACCCGTCTTCG
TTGAATAGTTATCCCGCTACGTTGTCCCGTAAAACCAGACGGAGGGGAAG
CGACGGGCTCATCATGGGTCAAAATGATAGTGACTCAACGACATTCTTAC
CGTCACCTCCAAACGGGATGTGTCGCATGCCTACACGACGCCGACAACAC
CGACGTGCTAGCGATACGGATTTGTTATTGAGCGGAAAGGTTACTGATCA
TTTACAAGAGCTCCATAAGATGGCTTTACAACGGAATGCAAAGAATTTGA
TGCAAAGACGTAAAGATGACATGGACGAACCTCTCGTTGTTGATGAGCAT
AAAGAAGACAGCGATGATGGAGCTAAGAGTGATATTAATGAACCACCCAG
ACAATACCATGGTCGGCGCAGGCGCAGTGACAGTAATTTGATTCTACCTT
CACTGAACGTCAAAAAGATGTTAACACAACGTCAGCTAACACCCATGCCA
GGTGTGAGACGGGGTAAACACGTGACTTTTAATGATGAGGATGATCAACT
AGTGGAATATGACTTACCATCAAAATGTAACAGTATCTGCGAAGGACAAA
CTTTACACGATTCTCTAGAACAATTGAATGGACCTGAGATAACGACCTCA
GAGAAGATTGAACgttttttaaaaagcttgaaCATTCAAGAAGATCATGA
TAGTCAACATAGTGAT Run BLAST on NCBI protein sequence of TCONS_00002781-protein >TCONS_00002781-protein ID=TCONS_00002781-protein|Name=TCONS_00002781-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
EETLRAMEKAEGIVYERLYVRRSSGSSPSGRLYEISETIKELPSAITSGL
EWANSKRKTRRRGSADNLLIDNNNDVIEEHPSSLNSYPATLSRKTRRRGS
DGLIMGQNDSDSTTFLPSPPNGMCRMPTRRRQHRRASDTDLLLSGKVTDH
LQELHKMALQRNAKNLMQRRKDDMDEPLVVDEHKEDSDDGAKSDINEPPR
QYHGRRRRSDSNLILPSLNVKKMLTQRQLTPMPGVRRGKHVTFNDEDDQL
VEYDLPSKCNSICEGQTLHDSLEQLNGPEITTSEKIERFLKSLNIQEDHD
SQHSD Run BLAST on NCBI transcript from alignment at sc0000021:827535..828450 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002781 ID=TCONS_00002781|Name=TCONS_00002781|organism=Clytia hemisphaerica|type=transcript|length=916bp|location=Sequence derived from alignment at sc0000021:827535..828450 (Clytia hemisphaerica)
ATCACTATGTTGACTATCATGATCTTCTTGAATGttcaagctttttaaaa
aacGTTCAATCTTCTCTGAGGTCGTTATCTCAGGTCCATTCAATTGTTCT
AGAGAATCGTGTAAAGTTTGTCCTTCGCAGATACTGTTACATTTTGATGG
TAAGTCATATTCCACTAGTTGATCATCCTCATCATTAAAAGTCACGTGTT
TACCCCGTCTCACACCTGGCATGGGTGTTAGCTGACGTTGTGTTAACATC
TTTTTGACGTTCAGTGAAGGTAGAATCAAATTACTGTCACTGCGCCTGCG
CCGACCATGGTATTGTCTGGGTGGTTCATTAATATCACTCTTAGCTCCAT
CATCGCTGTCTTCTTTATGCTCATCAACAACGAGAGGTTCGTCCATGTCA
TCTTTACGTCTTTGCATCAAATTCTTTGCATTCCGTTGTAAAGCCATCTT
ATGGAGCTCTTGTAAATGATCAGTAACCTTTCCGCTCAATAACAAATCCG
TATCGCTAGCACGTCGGTGTTGTCGGCGTCGTGTAGGCATGCGACACATC
CCGTTTGGAGGTGACGGTAAGAATGTCGTTGAGTCACTATCATTTTGACC
CATGATGAGCCCGTCGCTTCCCCTCCGTCTGGTTTTACGGGACAACGTAG
CGGGATAACTATTCAACGAAGACGGGTGTTCTTCAATAACATCATTATTA
TTGTCGATCAGCAAATTGTCAGCACTTCCTCTACGTCGTGTTTTACGTTT
GGAGTTTGCCCATTCCAAACCAGAAGTAATAGCTGAGGGAAGCTCTTTTA
TGGTTTCACTGATCTCGTATAGTCGTCCACTAGGGCTTGATCCTGAACTC
CTTCGGACATATAAACGCTCGTAAACTATCCCTTCAGCTTTTTCCATAGC
TCTTAGTGTCTCTTCC Coding sequence (CDS) from alignment at sc0000021:827535..828450 >TCONS_00002781 ID=TCONS_00002781|Name=TCONS_00002781|organism=Clytia hemisphaerica|type=CDS|length=915bp|location=Sequence derived from alignment at sc0000021:827535..828450 (Clytia hemisphaerica)
ATCACTATGTTGACTATCATGATCTTCTTGAATGttcaagctttttaaaa
aacGTTCAATCTTCTCTGAGGTCGTTATCTCAGGTCCATTCAATTGTTCT
AGAGAATCGTGTAAAGTTTGTCCTTCGCAGATACTGTTACATTTTGATGG
TAAGTCATATTCCACTAGTTGATCATCCTCATCATTAAAAGTCACGTGTT
TACCCCGTCTCACACCTGGCATGGGTGTTAGCTGACGTTGTGTTAACATC
TTTTTGACGTTCAGTGAAGGTAGAATCAAATTACTGTCACTGCGCCTGCG
CCGACCATGGTATTGTCTGGGTGGTTCATTAATATCACTCTTAGCTCCAT
CATCGCTGTCTTCTTTATGCTCATCAACAACGAGAGGTTCGTCCATGTCA
TCTTTACGTCTTTGCATCAAATTCTTTGCATTCCGTTGTAAAGCCATCTT
ATGGAGCTCTTGTAAATGATCAGTAACCTTTCCGCTCAATAACAAATCCG
TATCGCTAGCACGTCGGTGTTGTCGGCGTCGTGTAGGCATGCGACACATC
CCGTTTGGAGGTGACGGTAAGAATGTCGTTGAGTCACTATCATTTTGACC
CATGATGAGCCCGTCGCTTCCCCTCCGTCTGGTTTTACGGGACAACGTAG
CGGGATAACTATTCAACGAAGACGGGTGTTCTTCAATAACATCATTATTA
TTGTCGATCAGCAAATTGTCAGCACTTCCTCTACGTCGTGTTTTACGTTT
GGAGTTTGCCCATTCCAAACCAGAAGTAATAGCTGAGGGAAGCTCTTTTA
TGGTTTCACTGATCTCGTATAGTCGTCCACTAGGGCTTGATCCTGAACTC
CTTCGGACATATAAACGCTCGTAAACTATCCCTTCAGCTTTTTCCATAGC
TCTTAGTGTCTCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002781-exon-sc0000021-1491911889:827535..828450 | TCONS_00002781-exon-sc0000021-1491911889:827535..828450 | Clytia hemisphaerica | exon |
| TCONS_00002781-exon-sc0000021-1510915933:827535..828450 | TCONS_00002781-exon-sc0000021-1510915933:827535..828450 | Clytia hemisphaerica | exon |
| TCONS_00002781-exon-sc0000021-1575043694:827535..828450 | TCONS_00002781-exon-sc0000021-1575043694:827535..828450 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021 | supercontig | sc0000021:827535..828450 . |
Blast
The following BLAST results are available for this feature:
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