TCONS_00002734 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002734
Unique NameTCONS_00002734
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4055

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002734 ID=TCONS_00002734|Name=TCONS_00002734|organism=Clytia hemisphaerica|type=transcript|length=4055bp
AAAAATAATaacctttttttttcatcatttcgtTTCGCGCGCtattctca
tttttatttgtGATTGTCTTTATACGTTCATGCGGTGAAAGAAGAGCGCG
CGCGCTACAAAACATGCGAAATTGTTTAGTTCGCTATCTTCAATCAAAAC
TTTAACAATGGAAATCTACTTTTTTTCGCAATtaatgttcttttgttttt
ttactgtGCTTGAGCTACCGTCCTCCGCGCTATAAACTAACTCACTAAAC
TTTACATGTTACTTTATATACCAAAAAACCGAATTCAGCTGTATGTATGT
CTCATTCTCATACACATCTAATTTACATTGCAGTATACATTTTTCTCAGA
GCAGCTTACTGGAACGATCGATATTGGAGCTATTTTAACTTAACTCAATA
AATGAAGTGACACTACAGACTGTatgttaaataaataaaaaacgcTTATA
TAACACGGAATTCAATATGGATTTATCATCTTTATCATTACTACTGATCT
GCATTATCATCAGTTTCGCAGCTTTGGAAGGAACGAAAACGGGACACGAC
TTAATTGTATATCATCGTGCAAAGAAAGTTTTGGAACTTATTCAAAAACG
TTCTTGTAGGGAGTTGATGTCATCCAAAAATTGTACTTTCATTAAAACAC
GTCCGTCAACTGATATGAACTTTTACATGGCAGAGAAATTAAGTAATACA
AGTTCACTTAGCATGCTGGTTCCTTTACGACCAAGCCCCTTTGATTTATA
TAAACACTTAGACGCCGTTGTTGTTGTAGACCCGATGCCAGATGCACATT
TTGGACACAGTCTAGTGGTATCTCTTGTCAAAGTTGACATTCCGAAAACC
AAATGTGATCAACTCAGTGGAATCTACTATACATCACCTATTTCCAAACC
TGAATGCATGTATCTTCCACGAAACAATGGAAAATGCTTATTAACTGCAC
AACTGAGTCCTCGTAAACGCCGTGAAAGACTGAGGCGAGCTTGTTCCTTC
GATTTCATTCCTTTTGTATATGACACCACTGCAGTAGGGCACCAACAACT
CAAATGCCACTCCATAACCAGGAAATTTGCCAAATGTCCTAAAGCTGATG
TTATTGATAAAGACAAATGCAAGAATAAACTTTGTCCGCCAAAGTCGACA
ACGAAGAAGCCAGATAAAGGGCGTAAATGTGGGTGGTCGTGTGATTACGC
CCTCTTGGTATCAGGTGGATGGAGTAAATATATAAACCGGATAAGACATC
TACATAACATCCAGGAAGTTTTCAAACATTTGCAAACGAGCCGGTCATTT
GATAAAGAAAACATCAAAGTCTTTTTCGCCAATAATGCGACTATTGAACT
GGATGGTGATTTAAAAGCCAAAGAAACAGTTCCCGCAGTTGACGCCCTCA
CGATCACGCGACACGTTCGTTCCGTATGCTCACGTAACACGAAATGTATC
GATACCTTTGTTATCTATCTCAACGGTCCAACTACCAAAAACGGTGACCT
GTTGCTTTGGGATTGGAATGCGGACGGAAAAGCAAGCAGCTCTGAAATCC
TAACCATTGGTGAATTATTATATCCATTATCAAATTGTAATGCTAAAAAC
TATTTGATCATTGCTGATCAGAATTATGCTGGACATATTGTTGATTATGT
GGATTTACAACGTAAATTAAAAAGACGTAATTTTGATAAGATTCATGTTT
TGGCAGCATCTAATAAGAACTCGTACACatggaaaagagattttacaaga
TCGTTCATTGAGAAAGATGATAATCGTTTAGATGACCCTGGCTCACAAAC
GTCATCCGCCAGACGTATCTCGTCAATAGCAAAGGACTTATCAAGCTCAA
CAAAATTAAAGAGACATGATATTCGGTATTTGGCTGGTTCCAATCCTGAT
TTAACGTTAACCGGTAATTTCGGACAGAAAGCTGGATGTTCTTGAGGACG
AGGAGAAGTAGCATCGACAATATTAGTTCACAATCGGTGTGACTAGAAAG
TGGTGTTAGTGTCTGAGGTTCAACACTGGAACGTAATGTTGTTTTAACGT
CCACAAGACGTTATTCTGATGTTTTGGACGTCAGATTGACGTTGTTATGA
CGTTAATATAGTAGTCGAAAGAATGTTACTCGTCGAATCATAGAGCAATC
CCAAACAATGACAACAATCCAATCTGCGAATGCAAACTTTGAAAACAGAG
TAGTTCTTCTGGATGAAAAAATGCAAAAGACCTTCGGAAAATCGGTACTG
CTTTGCATGATAAAATACTGTTTGCAGTAACAAAGAACTACCAGTACAAA
TTGCATATAAAGCTCAGTGGTACAAACCAAGAAAGAAGGAATCTTTGcat
ttaactttttaaaaacaaaaccaatgTAAATATATACCTTGTGTGTATGC
AAGTAGCTATCACTCAATAGATTTTTACTAAAATGTAAAATAATTCCCTt
aaattaaaataaagaaagaagaaaatgaaaatttcatcatttatCATTAT
CATTGCAGGAATAAAAGATGTTACCAAATAAATTTAAGGCTTATCCGTTG
CTTTGTCTTGTAGTATGCTTCAATAGTCTTCCTTTATTATTCATACCCAA
TAATTATTTGTTTGTCTGACTCGTCAGAATTGGGTGTTGATGCACACGTT
TTTTACATTAGAATAACTTCTACAAGAATATATTGCCTTGATGGTAGGAA
TACCCTTTTTATGTAACTCTTAGCAATAATAGCCTATACGAAAACTAAAC
GTAATTTTTCAATCACTTTAACGGTAAGGCTAGTCACCACATAAGTTTTC
ATAACATTTTGCTGAAGAAAGTCGTATCTGACTGGCTGATCATTTTTCGG
ATTTGTGGTGATGATGATGAAGCAAATTAAAGcgaactttcttctttttc
ttcttcttttgtgATTTGCCATAATCTTCAACATCCATTTCCGATGTTTT
CCTTTGGTGTCTCGCGTCTTCCTCATCAGCCATAACATCGACAATTTTTT
CTTCTAACATTGATCTACTTCTTAAACGAAATGTACCCGGTGAAGCTTCG
TTCATTTCTCGCTTTAAAGCATTCGTTTGTTGTTCCAAACCAATTTCAAA
CACATCTCGAATATTATCACCTGTTTTAGCCGAACACACAGAAAATCGTA
CATTCATATCACCTTTCCTGATATTTTTACTAATAAAACTGTTATTATAA
CTCAATGGATCATTCAATTTATCAGATTTTCCAGCAACGAAAATAACCAT
CTGACCTTCACTCATTGGTTTAGTATCCCTTGTAAACTCATACAAGCGTA
TAGCTTCTCTCCAAGTTGATTTTCGACCAACATCGTACATGATTACAATC
AAATCAGAGCGACCCACATTCAAACGTCTCATAGCTGGAAACTGCTCGCT
TCCTGAGGTATCAACAATTTCTAAAGCGCATGCACAATTCTTATGATGAA
AAACAAATTTATGAAAATCTTCAACAGTAGGTACATAAGGATCATgaaat
tcaaaagattttttctttttgtgttttcttttttcatcattttcagcTTC
ATGAAATAGACGATGGAGTAGTTCAGTTTTACCGACTTTGGCATCACCAA
AGATGGAGATCCGAATTGAAGGAAGAGCTTCAACGTCGTGCTTGTGGTGG
TGATGGTGACGATATTTCCGCAACTGTTCCATTGTGCATGAAGATTTTTT
AAGTTTCGTTGATTTTGTTTgtccctcaacttgatttcaactTATTTACA
GGAATTTCAACAAGTAGCTTATACTGACCATTTTCTTTTGATCTGCTAGA
TTTGATTGAAAGTCGATCACCTTTTAGATGCAGCGTTTATAAGAGTCTCT
TCGATTTTTGTTTATGTCCCTCAATTTGATTTCAACTTATTTACAGGAAT
TTCAATAAGTAGCCATACGGTTCATTTATTTTCCTTTGACGTCCTTTGTT
GTTGTGTTGTCTTTTCTTGAAGAATTTACTGGCACTTTTCGTACCAGATT
CGATTGAAAGTTGATCGCTTTTAGATGCATTTGACTCAACTTCAACCATC
TCAAG
Run BLAST on NCBI

protein sequence of Putative cnidarian restricted protein

>TCONS_00002734-protein ID=TCONS_00002734-protein|Name=Putative cnidarian restricted protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
MDLSSLSLLLICIIISFAALEGTKTGHDLIVYHRAKKVLELIQKRSCREL
MSSKNCTFIKTRPSTDMNFYMAEKLSNTSSLSMLVPLRPSPFDLYKHLDA
VVVVDPMPDAHFGHSLVVSLVKVDIPKTKCDQLSGIYYTSPISKPECMYL
PRNNGKCLLTAQLSPRKRRERLRRACSFDFIPFVYDTTAVGHQQLKCHSI
TRKFAKCPKADVIDKDKCKNKLCPPKSTTKKPDKGRKCGWSCDYALLVSG
GWSKYINRIRHLHNIQEVFKHLQTSRSFDKENIKVFFANNATIELDGDLK
AKETVPAVDALTITRHVRSVCSRNTKCIDTFVIYLNGPTTKNGDLLLWDW
NADGKASSSEILTIGELLYPLSNCNAKNYLIIADQNYAGHIVDYVDLQRK
LKRRNFDKIHVLAASNKNSYTWKRDFTRSFIEKDDNRLDDPGSQTSSARR
ISSIAKDLSSSTKLKRHDIRYLAGSNPDLTLTGNFGQKAGCS
Run BLAST on NCBI

transcript from alignment at sc0000021:770935..778734-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002734 ID=TCONS_00002734|Name=TCONS_00002734|organism=Clytia hemisphaerica|type=transcript|length=7800bp|location=Sequence derived from alignment at sc0000021:770935..778734- (Clytia hemisphaerica)
AAAAATAATAACCTTTTTTTTTCATCATTTCGTTTCGCGCGCTATTCTCA TTTTTATTTGTGATTGTCTTTATACGTTCATGCGGTGAAAGAAGAGCGCG CGCGCTACAAAACATGCGAAATTGTTTAGTTCGCTATCTTCAATCAAAAC TTTAACAATGGAAATCTACTTTTTTTCGCAATTAATGTTCTTTTGTTTTT TTACTGTGCTTGAGCTACCGTCCTCCGCGCTATAAACTAACTCACTAAAC TTTACATGTTACTTTATATACCAAAAAACCGAATTCAGCTGTATGTATGT CTCATTCTCATACACATCTAATTTACATTGCAGTATACATTTTTCTCAGA GCAGCTTACTGGAACGATCGATATTGGAGCTATTTTAACTTAACTCAATA AATGAAGTGACACTACAGACTGTATGTTAAATAAATAAAAAACGCTTATA TAACACGGAATTCAATATGGATTTATCATCTTTATCATTACTACTGATCT GCATTATCATCAGTTTCGCAGCTTTGGAAGGAACGAAAACGGGACACGAC TTAATTGTATATCATCGTGCAAAGAAAGTTTTGGAACTTATTCAAAAACG TTCTTGTAGGGAGTTGATGTCATCCAAAAATTGTACTTTCATTAAAACAC GTCCGTCAACTGATATGAACTTTTACATGGCAGAGAAATTAAGTAATACA AGTTCACTTAGCATGCTGGTTCCTTTACGACCAAGCCCCTTTGATTTATA TAAACACTTAGACGCCGTTGTTGTTGTAGACCCGATGCCAGATGCACATT TTGGACACAGTCTAGTGGNCTTAGACGCCGTTGTTGTTGTAGATCCGATG CCAGATGCACATTTTGGACACAGTCTAGTGGTATCTCTTGTCAAAGTTGA CATTCCGAAAACCAAATGTGATCAACTCAGTGGAATCTACTATACATCAC CTAGTAAGTCAATACCATAATTTACAGCTAGAAAAGTTGGATGTTTTAGT CTTCTACCGGTTTTTTTGACATTGTGAGATCTATAAAGCAAGGCAGGGTA TATTCCTAAAATGACCATGTTTAAGATAGGAGAACTATGAAACCATTTGA TCATTTTACGTTCATGTTTGTGGTCCTTTTTTTCGGCTAAGCAGTGATTT AGCTTTAAACTTTTGTAATTGACTCCTGGATGGATAACTTTTATCGGTTT CTTTTATACCAATTAATTTTGATACATTTTTAATATTTATAAATGATTTT CTTAATTAATGCTAGTCGGGATTCTGTCAATTCGACACATTTAAAAGGAA TCCTTAGCTTTTTGTCGGTACATTTTAAATGACGCAGGTTGATTACTTTA GATTGGCGTTTGGAATTTGATTTTAAATTAGATGTGGCTATCATGTGTCT GTGATAGGAGTTTGTTTTATTTAATTCGTATTTTTTAAATTGATACAGTA TCTGAGAAAGTCGAAGGTACAACCAACTCTCTCTAATTTGAACCTCTATA GAATTAGCTAGAAAGTTGTATAAAACACTCGCTCCATAATTCGAAGAAAA TTCTTGTCCCCTTGAAGATCGAATTAGAGTGGTTATTTTCGACAATCTCT AGATCTTCATTAATGCTGACTTTCGGAAAAACTGAAAATTATATCGACAT CGAGTTGGATGAACGAAATGCATCTAACTTGATGGTCGCTATTTTTATCG TCTGAGATTGGAAGCGTACTTTAGGGGTTATCTTTTTATTGCACTGTCTC TACATCGGCCCCAATAAATCCTCTTTCTTTATTTCAGTTTCCAAACCTGA ATGCATGTATCTTCCACGAAACAATGGAAAATGCTTATTAACTGCACAAC TGAGTCCTCGTAAACGCCGTGAAAGACTGAGGCGAGCTTGTTCCTTCGAT TTCATTCCTTTTGTATATGACACCACTGCAGTAGGGCACCAACAACTCAA ATGCCACTCCATAACCAGGAAATTTGCCAAATGTCCTAAAGCTGATGTTA TTGATAAAGACAAATGCAAGAATAAACTTTGTCCGCCAAAGTCGACAACG AAGAAGCCAGATAAAGGGCGTAAATGTGGGTGGTCGTGTGATTACGCCCT CTTGGTATCAGGTGGATGGAGTAAATATATAAACCGGATAAGACATCTAC ATAACATCCAGGAAGTTTTCAAACATTTGCAAACGAGCCGGTCATTTGAT AAAGAAAACATCAAAGTCTTTTTCGCCAATAATGCGACTATTGAACGTAA GTGAAAATTGTTTCTTTTTTTCTTGTCTGTCAATTCTTTGTGTTTTTTGT TTATCTCTGTCTATTTTCTGTGTAGGGGAAGGGATCTCTAATCAAATAGA GTAACCAATGTATCTAAGCAATACCTGACCTTCCAATAAGGTAATTTAAC TATTTCAAAAACCTCTTTTTACAAGATGCATACTGTATATACAGAGCTTG AAATCTTTATCGCAACCTCGTCCTTGTCTATTATCAGCTTTTTGATGCTT ACTGATAGCACCAGATTTTCTCCGGCGTGCATCAGTAACATAGATAAAAC CGAGTTTATGTATATGTGTTTTTCTGTGACTGAGACGGTAAGGTTCTAAT TTGACTAGATCTTGACCAGCTGAGGACGACGGTAAATCGGCACTTTTACC GTCCTCGCTTTTGCGGTTCAGAAGTGCGGGTTATTCCAAATCGCTTCAGT CATTCTACCGTCCTCAAAAGAGCAAATACATTAACTAGCTAAAGCCTGGG ATACACGGATGATGAAATCGTCTTTATTGTAATTCGTGTATTATAAGGGG CTGGCTCTTCGATCGTGACTATACTTTGAAAAGATCACTGTGCAAGTTCT AATTCTCAAGATAGATACTGGTACCATTAGCATAATTATTATAGGTTTTT TAAAGATGTATAATGACCGACTTCACATCTTCATTTTAACCGCTTACAAA TTTCTCTATCTATCTACTACTACATCTTAGATGTTGTGAATTTGTGAGCC TTGTTAAAAGAATGTCTTTACATTTAACACCTTTCTTAGCGGTATATGAC ATGAAATTTACCTACTCTTGCACTCATATCCCTCTCTTACTGTCATTTGT GAGAATGGACTGTTTTCTCTTTTTCGATGGCGGAACTAGGAAGGCCTCTT GAGATTCTAGAGAGATAACATAAGTTCGCCATTTATCTCACGTTTAATTA ATTCACTTGTCAAATTTTAACCGAACAGTTGTTAAAAAAATAGGTCTGAC GTCTATAGTTAATTTAGCCTGTACCAGACTCTTCTTCGATGACCTATGGC AAAATATAAAAAACGCCCGTGGCGGCGGGGTGGTACAGGCTAGTCTATAA TAAGCATCATCGTCATAATCATAAAGCTAAAAACATTTCTTTGCCTAAAG AAAAGTAGCTTGATCTTGATCTTAGTTTGAGTTCTTTTGATTTTTCGAAG AAAAAAAAAGCTCAAGGTATCTTTACACGACATGTCTTCACAGCATTTGA TAGTCTTAACTTCGTTAGATTTCATATTCGGTTAGCCGTTCGTTTAACTT TTCTCTTTTGATGCTTTTGATTGTCTTTCTGTCTTTCTGGTAACAGACCG ACAATAAAGTCGGCATTTTTTTGTGTCGGTCTTGCCGAATTCAATCGTCT TTCTGTGATTCTTATAGTAGACTATCAATTCAGAATTCAGCTTTTAGACT CTAACTTCTTTGAAAGACAATTTTCTTACATTCTCCGATAACTTTTATAT TCTCTCCAGGGATCTTAGATTTTCCCTTTGAACCAGAGTTTTTCTTTAAA GGAAAGGTCTTTGATACTGTGTTTTTACCAGACCCTATTCTTCGGAATCT GGCATCAAAACAAAAGAAAAAAATTTTCCCAGCAATGTAAAAGTTAGAAT AGCTGACGAGAAATCTAAAATCACGCTTAATGTATTTTCTGAACATAGAC ATCATGATTGCGTCATACATAAGCATAGTAGTATTTTAATGACATTTAAA TCGGATATTATCGATTTGCGGTCAGAAAAACTTTGACAAGGTTTTATTGT TGGGCTGTAGGAATAATAATCTTTTTTTAAATGATGCCGAGGCAGCTTGC TTTAAAACTAAAACATGCTTAAAACTTTTAAGCGCACGCGTTATAGCTTG AATACGAGAGATTTGGTCATAAAATTATATGCATTGCCTTTCTACCTATA CAAGTTCCCAAAATAGGATTTAAACAGCTCATAAGTAGTTTAAGTTTAAC TTATTCTCACTCAAATCTTATATTCTCAATTATAGAGACATAGAGCAAGA ATCTGACAATATGCCTGTGTATTTGTCATGAAATTTTAAGGGCATTTTAG AGACAAGCTAAAAGTTAATCTCATTATAGATCATCTATTCTGCGCATACC ACGTTCTACTCTCCAGTGCGAAGTTATTAGAATCCGCTTGGAGATAAAGT GGTCTGATTTAGCTGAAATTCTCCCTTAATCTCTGAGCGATCCCAAGATA TATGGTTGAAGCTTTGAGCTTAATCTTTAATATGATCTTTGTAGATCCGT TTCTTCCCTAGTCGGAATCGCAGACTTCCACAAAACCGCAGGTAGTATAA GGAGCACGAATCGGTTAGTGGATGCCAACAGCCTATTTCTTCATTTTCCT CTTAGTAGTTTTACGTTATGGTATGTGAAAAAGTGATTCGGTTTTTGTTT TAGTGGATGGTGATTTAAAAGCCAAAGAAACAGTTCCCGCAGTTGACGCC CTCACGATCACGCGACACGTTCGTTCCGTATGCTCACGTAACACGAAATG TATCGATACCTTTGTTATCTATCTCAACGGTCCAACTACCAAAAACGGTG ACCTGTTGCTTTGGGATTGGAATGCGGACGGAAAAGCAAGCAGCTCTGAA ATCCTAACCATTGGTGAATTATTATATCCATTATCAAATTGTAATGCTAA AAACTATTTGATCATTGCTGATCAGAATTATGCTGGACATATTGTTGATT ATGTGGATTTACAACGTAAATTAAAAAGACGTAATTTTGATAAGATTCAT GTTTTGGCAGCATCTAATAAGAACTCGTACACATGGAAAAGAGATTTTAC AAGATCGTTCATTGAGAAAGATGATAATCGTTTAGATGACCCTGGCTCAC AAACGTCATCCGCCAGACGTATCTCGTCAATAGCAAAGGTATAAATTTAA CTTCGTTTTATTTATTCACGCAGATTCCAAAATCTCGTTTGCTCTGCGAC TTAAACTCAAATGAGAACGTCATGACGAGTACCTTTCCTGATAATAATGT GAATAAAATTAAAACTAGTGCAGTTGACTATTTTCAAGGGGCGGGAATTG GATTTTCATCGAATAAGGGAGCGTAACGAATAATAGAGCGTATTTTATGA GAGTTTCTTCTTGACGGTGACTTTCAATATCATCGAATAATTGAGCGTAT CGAATAGTAGAACGTTGAATTAAATAGCACCAACTGTATTATTATAAACT TTGTAGTTTTTATCCCAGTCAAAATGCTTTTAAAGGTTATCTTCGATTGT TAACAAATTCTTATTTTTTATCCTTACAGGACTTATCAAGCTCAACAAAA TTAAAGAGACATGATATTCGGTATTTGGCTGGTTCCAATCCTGATTTAAC GTTAACCGGTAATTTCGGACAGAAAGCTGGATGTTCTTGAGGACGAGGAG AAGTAGCATCGACAATATTAGTTCACAATCGGTGTGACTAGAAAGTGGTG TTAGTGTCTGAGGTTCAACACTGGAACGTAATGTTGTTTTAACGTCCACA AGACGTTATTCTGATGTTTTGGACGTCAGATTGACGTTGTTATGACGTTA ATATAGTAGTCGAAAGAATGTTACTCGTCGAATCATAGAGCAATCCCAAA CAATGACAACAATCCAATCTGCGAATGCAAACTTTGAAAACAGAGTAGTT CTTCTGGATGAAAAAATGCAAAAGACCTTCGGAAAATCGGTACTGCTTTG CATGATAAAATACTGTTTGCAGTAACAAAGAACTACCAGTACAAATTGCA TATAAAGCTCAGTGGTACAAACCAAGAAAGAAGGAATCTTTGCATTTAAC TTTTTAAAAACAAAACCAATGTAAATATATACCTTGTGTGTATGCAAGTA GCTATCACTCAATAGATTTTTACTAAAATGTAAAATAATTCCCTTAAATT AAAATAAAGAAAGAAGAAAATGAAAATTTCATCATTTATCATTATCATTG CAGGAATAAAAGATGTTACCAAATAAATTTAAGGCTTATCCGTTGCTTTG TCTTGTAGTATGCTTCAATAGTCTTCCTTTATTATTCATACCCAATAATT ATTTGTTTGTCTGACTCGTCAGAATTGGGTGTTGATGCACACGTTTTTTA CATTAGAATAACTTCTACAAGAATATATTGCCTTGATGGTAGGAATACCC TTTTTATGTAACTCTTAGCAATAATAGCCTATACGAAAACTAAACGTAAT TTTTCAATCACTTTAACGGTAAGGCTAGTCACCACATAAGTTTTCATAAC ATTTTGCTGAAGAAAGTCGTATCTGACTGGCTGATCATTTTTCGGATTTG TGGTGATGATGATGAAGCAAATTAAAGCGAACTTTCTTCTTTTTCTTCTT CTTTTGTGATTTGCCATAATCTTCAACATCCATTTCCGATGTTTTCCTTT GGTGTCTCGCGTCTTCCTCATCAGCCATAACATCGACAATTTTTTCTTCT AACATTGATCTACTTCTTAAACGAAATGTACCCGGTGAAGCTTCGTTCAT TTCTCGCTTTAAAGCATTCGTTTGTTGTTCCAAACCAATTTCAAACACAT CTCGAATATTATCACCTGTTTTAGCCGAACACACAGAAAATCGTACATTC ATATCACCTTTCCTGATATTTTTACTAATAAAACTGTTATTATAACTCAA TGGATCATTCAATTTATCAGATTTTCCAGCAACGAAAATAACCATCTGAC CTTCACTCATTGGTTTAGTATCCCTTGTAAACTCATACAAGCGTATAGCT TCTCTCCAAGTTGATTTTCGACCAACATCGTACATGATTACAATCAAATC AGAGCGACCCACATTCAAACGTCTCATAGCTGGAAACTGCTCGCTTCCTG AGGTATCAACAATTTCTAAAGCGCATGCACAATTCTTATGATGAAAAACA AATTTATGAAAATCTTCAACAGTAGGTACATAAGGATCATGAAATTCAAA AGATTTTTTCTTTTTGTGTTTTCTTTTTTCATCATTTTCAGCTTCATGAA ATAGACGATGGAGTAGTTCAGTTTTACCGACTTTGGCATCACCAAAGATG GAGATCCGAATTGAAGGAAGAGCTTCAACGTCGTGCTTGTGGTGGTGATG GTGACGATATTTCCGCAACTGTTCCATTGTGCATGAAGATTTTTTAAGTT TCGTTGATTTTGTTTGTCCCTCAACTTGATTTCAACTTATTTACAGGAAT TTCAACAAGTAGCTTATACTGACCATTTTCTTTTGATCTGCTAGATTTGA TTGAAAGTCGATCACCTTTTAGATGCAGCGTTTATAAGAGTCTCTTCGAT TTTTGTTTATGTCCCTCAATTTGATTTCAACTTATTTACAGGAATTTCAA TAAGTAGCCATACGGTTCATTTATTTTCCTTTGACGTCCTTTGTTGTTGT GTTGTCTTTTCTTGAAGAATTTACTGGCACTTTTCGTACCAGATTCGATT GAAAGTTGATCGCTTTTAGATGCATTTGACTCAACTTCAACCATCTCAAG

Coding sequence (CDS) from alignment at sc0000021:770935..778734-

>TCONS_00002734 ID=TCONS_00002734|Name=TCONS_00002734|organism=Clytia hemisphaerica|type=CDS|length=7395bp|location=Sequence derived from alignment at sc0000021:770935..778734- (Clytia hemisphaerica)
GACTTATCAAGCTCAACAAAATTAAAGAGACATGATATTCGGTATTTGGC
TGGTTCCAATCCTGATTTAACGTTAACCGGTAATTTCGGACAGAAAGCTG
GATGTTCTTGATGGATGGTGATTTAAAAGCCAAAGAAACAGTTCCCGCAG
TTGACGCCCTCACGATCACGCGACACGTTCGTTCCGTATGCTCACGTAAC
ACGAAATGTATCGATACCTTTGTTATCTATCTCAACGGTCCAACTACCAA
AAACGGTGACCTGTTGCTTTGGGATTGGAATGCGGACGGAAAAGCAAGCA
GCTCTGAAATCCTAACCATTGGTGAATTATTATATCCATTATCAAATTGT
AATGCTAAAAACTATTTGATCATTGCTGATCAGAATTATGCTGGACATAT
TGTTGATTATGTGGATTTACAACGTAAATTAAAAAGACGTAATTTTGATA
AGATTCATGTTTTGGCAGCATCTAATAAGAACTCGTACACATGGAAAAGA
GATTTTACAAGATCGTTCATTGAGAAAGATGATAATCGTTTAGATGACCC
TGGCTCACAAACGTCATCCGCCAGACGTATCTCGTCAATAGCAAAGTTTC
CAAACCTGAATGCATGTATCTTCCACGAAACAATGGAAAATGCTTATTAA
CTGCACAACTGAGTCCTCGTAAACGCCGTGAAAGACTGAGGCGAGCTTGT
TCCTTCGATTTCATTCCTTTTGTATATGACACCACTGCAGTAGGGCACCA
ACAACTCAAATGCCACTCCATAACCAGGAAATTTGCCAAATGTCCTAAAG
CTGATGTTATTGATAAAGACAAATGCAAGAATAAACTTTGTCCGCCAAAG
TCGACAACGAAGAAGCCAGATAAAGGGCGTAAATGTGGGTGGTCGTGTGA
TTACGCCCTCTTGGTATCAGGTGGATGGAGTAAATATATAAACCGGATAA
GACATCTACATAACATCCAGGAAGTTTTCAAACATTTGCAAACGAGCCGG
TCATTTGATAAAGAAAACATCAAAGTCTTTTTCGCCAATAATGCGACTAT
TGAACATTTTGGACACAGTCTAGTGGTATCTCTTGTCAAAGTTGACATTC
CGAAAACCAAATGTGATCAACTCAGTGGAATCTACTATACATCACCTAAT
GGATTTATCATCTTTATCATTACTACTGATCTGCATTATCATCAGTTTCG
CAGCTTTGGAAGGAACGAAAACGGGACACGACTTAATTGTATATCATCGT
GCAAAGAAAGTTTTGGAACTTATTCAAAAACGTTCTTGTAGGGAGTTGAT
GTCATCCAAAAATTGTACTTTCATTAAAACACGTCCGTCAACTGATATGA
ACTTTTACATGGCAGAGAAATTAAGTAATACAAGTTCACTTAGCATGCTG
GTTCCTTTACGACCAAGCCCCTTTGATTTATATAAACACTTAGACGCCGT
TGTTGTTGTAGACCCGATGCCAGATGCACGACTTATCAAGCTCAACAAAA
TTAAAGAGACATGATATTCGGTATTTGGCTGGTTCCAATCCTGATTTAAC
GTTAACCGGTAATTTCGGACAGAAAGCTGGATGTTCTTGATGGATGGTGA
TTTAAAAGCCAAAGAAACAGTTCCCGCAGTTGACGCCCTCACGATCACGC
GACACGTTCGTTCCGTATGCTCACGTAACACGAAATGTATCGATACCTTT
GTTATCTATCTCAACGGTCCAACTACCAAAAACGGTGACCTGTTGCTTTG
GGATTGGAATGCGGACGGAAAAGCAAGCAGCTCTGAAATCCTAACCATTG
GTGAATTATTATATCCATTATCAAATTGTAATGCTAAAAACTATTTGATC
ATTGCTGATCAGAATTATGCTGGACATATTGTTGATTATGTGGATTTACA
ACGTAAATTAAAAAGACGTAATTTTGATAAGATTCATGTTTTGGCAGCAT
CTAATAAGAACTCGTACACATGGAAAAGAGATTTTACAAGATCGTTCATT
GAGAAAGATGATAATCGTTTAGATGACCCTGGCTCACAAACGTCATCCGC
CAGACGTATCTCGTCAATAGCAAAGTTTCCAAACCTGAATGCATGTATCT
TCCACGAAACAATGGAAAATGCTTATTAACTGCACAACTGAGTCCTCGTA
AACGCCGTGAAAGACTGAGGCGAGCTTGTTCCTTCGATTTCATTCCTTTT
GTATATGACACCACTGCAGTAGGGCACCAACAACTCAAATGCCACTCCAT
AACCAGGAAATTTGCCAAATGTCCTAAAGCTGATGTTATTGATAAAGACA
AATGCAAGAATAAACTTTGTCCGCCAAAGTCGACAACGAAGAAGCCAGAT
AAAGGGCGTAAATGTGGGTGGTCGTGTGATTACGCCCTCTTGGTATCAGG
TGGATGGAGTAAATATATAAACCGGATAAGACATCTACATAACATCCAGG
AAGTTTTCAAACATTTGCAAACGAGCCGGTCATTTGATAAAGAAAACATC
AAAGTCTTTTTCGCCAATAATGCGACTATTGAACATTTTGGACACAGTCT
AGTGGTATCTCTTGTCAAAGTTGACATTCCGAAAACCAAATGTGATCAAC
TCAGTGGAATCTACTATACATCACCTAATGGATTTATCATCTTTATCATT
ACTACTGATCTGCATTATCATCAGTTTCGCAGCTTTGGAAGGAACGAAAA
CGGGACACGACTTAATTGTATATCATCGTGCAAAGAAAGTTTTGGAACTT
ATTCAAAAACGTTCTTGTAGGGAGTTGATGTCATCCAAAAATTGTACTTT
CATTAAAACACGTCCGTCAACTGATATGAACTTTTACATGGCAGAGAAAT
TAAGTAATACAAGTTCACTTAGCATGCTGGTTCCTTTACGACCAAGCCCC
TTTGATTTATATAAACACTTAGACGCCGTTGTTGTTGTAGACCCGATGCC
AGATGCACGACTTATCAAGCTCAACAAAATTAAAGAGACATGATATTCGG
TATTTGGCTGGTTCCAATCCTGATTTAACGTTAACCGGTAATTTCGGACA
GAAAGCTGGATGTTCTTGATGGATGGTGATTTAAAAGCCAAAGAAACAGT
TCCCGCAGTTGACGCCCTCACGATCACGCGACACGTTCGTTCCGTATGCT
CACGTAACACGAAATGTATCGATACCTTTGTTATCTATCTCAACGGTCCA
ACTACCAAAAACGGTGACCTGTTGCTTTGGGATTGGAATGCGGACGGAAA
AGCAAGCAGCTCTGAAATCCTAACCATTGGTGAATTATTATATCCATTAT
CAAATTGTAATGCTAAAAACTATTTGATCATTGCTGATCAGAATTATGCT
GGACATATTGTTGATTATGTGGATTTACAACGTAAATTAAAAAGACGTAA
TTTTGATAAGATTCATGTTTTGGCAGCATCTAATAAGAACTCGTACACAT
GGAAAAGAGATTTTACAAGATCGTTCATTGAGAAAGATGATAATCGTTTA
GATGACCCTGGCTCACAAACGTCATCCGCCAGACGTATCTCGTCAATAGC
AAAGTTTCCAAACCTGAATGCATGTATCTTCCACGAAACAATGGAAAATG
CTTATTAACTGCACAACTGAGTCCTCGTAAACGCCGTGAAAGACTGAGGC
GAGCTTGTTCCTTCGATTTCATTCCTTTTGTATATGACACCACTGCAGTA
GGGCACCAACAACTCAAATGCCACTCCATAACCAGGAAATTTGCCAAATG
TCCTAAAGCTGATGTTATTGATAAAGACAAATGCAAGAATAAACTTTGTC
CGCCAAAGTCGACAACGAAGAAGCCAGATAAAGGGCGTAAATGTGGGTGG
TCGTGTGATTACGCCCTCTTGGTATCAGGTGGATGGAGTAAATATATAAA
CCGGATAAGACATCTACATAACATCCAGGAAGTTTTCAAACATTTGCAAA
CGAGCCGGTCATTTGATAAAGAAAACATCAAAGTCTTTTTCGCCAATAAT
GCGACTATTGAACATTTTGGACACAGTCTAGTGGTATCTCTTGTCAAAGT
TGACATTCCGAAAACCAAATGTGATCAACTCAGTGGAATCTACTATACAT
CACCTAATGGATTTATCATCTTTATCATTACTACTGATCTGCATTATCAT
CAGTTTCGCAGCTTTGGAAGGAACGAAAACGGGACACGACTTAATTGTAT
ATCATCGTGCAAAGAAAGTTTTGGAACTTATTCAAAAACGTTCTTGTAGG
GAGTTGATGTCATCCAAAAATTGTACTTTCATTAAAACACGTCCGTCAAC
TGATATGAACTTTTACATGGCAGAGAAATTAAGTAATACAAGTTCACTTA
GCATGCTGGTTCCTTTACGACCAAGCCCCTTTGATTTATATAAACACTTA
GACGCCGTTGTTGTTGTAGACCCGATGCCAGATGCACGACTTATCAAGCT
CAACAAAATTAAAGAGACATGATATTCGGTATTTGGCTGGTTCCAATCCT
GATTTAACGTTAACCGGTAATTTCGGACAGAAAGCTGGATGTTCTTGATG
GATGGTGATTTAAAAGCCAAAGAAACAGTTCCCGCAGTTGACGCCCTCAC
GATCACGCGACACGTTCGTTCCGTATGCTCACGTAACACGAAATGTATCG
ATACCTTTGTTATCTATCTCAACGGTCCAACTACCAAAAACGGTGACCTG
TTGCTTTGGGATTGGAATGCGGACGGAAAAGCAAGCAGCTCTGAAATCCT
AACCATTGGTGAATTATTATATCCATTATCAAATTGTAATGCTAAAAACT
ATTTGATCATTGCTGATCAGAATTATGCTGGACATATTGTTGATTATGTG
GATTTACAACGTAAATTAAAAAGACGTAATTTTGATAAGATTCATGTTTT
GGCAGCATCTAATAAGAACTCGTACACATGGAAAAGAGATTTTACAAGAT
CGTTCATTGAGAAAGATGATAATCGTTTAGATGACCCTGGCTCACAAACG
TCATCCGCCAGACGTATCTCGTCAATAGCAAAGTTTCCAAACCTGAATGC
ATGTATCTTCCACGAAACAATGGAAAATGCTTATTAACTGCACAACTGAG
TCCTCGTAAACGCCGTGAAAGACTGAGGCGAGCTTGTTCCTTCGATTTCA
TTCCTTTTGTATATGACACCACTGCAGTAGGGCACCAACAACTCAAATGC
CACTCCATAACCAGGAAATTTGCCAAATGTCCTAAAGCTGATGTTATTGA
TAAAGACAAATGCAAGAATAAACTTTGTCCGCCAAAGTCGACAACGAAGA
AGCCAGATAAAGGGCGTAAATGTGGGTGGTCGTGTGATTACGCCCTCTTG
GTATCAGGTGGATGGAGTAAATATATAAACCGGATAAGACATCTACATAA
CATCCAGGAAGTTTTCAAACATTTGCAAACGAGCCGGTCATTTGATAAAG
AAAACATCAAAGTCTTTTTCGCCAATAATGCGACTATTGAACATTTTGGA
CACAGTCTAGTGGTATCTCTTGTCAAAGTTGACATTCCGAAAACCAAATG
TGATCAACTCAGTGGAATCTACTATACATCACCTAATGGATTTATCATCT
TTATCATTACTACTGATCTGCATTATCATCAGTTTCGCAGCTTTGGAAGG
AACGAAAACGGGACACGACTTAATTGTATATCATCGTGCAAAGAAAGTTT
TGGAACTTATTCAAAAACGTTCTTGTAGGGAGTTGATGTCATCCAAAAAT
TGTACTTTCATTAAAACACGTCCGTCAACTGATATGAACTTTTACATGGC
AGAGAAATTAAGTAATACAAGTTCACTTAGCATGCTGGTTCCTTTACGAC
CAAGCCCCTTTGATTTATATAAACACTTAGACGCCGTTGTTGTTGTAGAC
CCGATGCCAGATGCACGACTTATCAAGCTCAACAAAATTAAAGAGACATG
ATATTCGGTATTTGGCTGGTTCCAATCCTGATTTAACGTTAACCGGTAAT
TTCGGACAGAAAGCTGGATGTTCTTGATGGATGGTGATTTAAAAGCCAAA
GAAACAGTTCCCGCAGTTGACGCCCTCACGATCACGCGACACGTTCGTTC
CGTATGCTCACGTAACACGAAATGTATCGATACCTTTGTTATCTATCTCA
ACGGTCCAACTACCAAAAACGGTGACCTGTTGCTTTGGGATTGGAATGCG
GACGGAAAAGCAAGCAGCTCTGAAATCCTAACCATTGGTGAATTATTATA
TCCATTATCAAATTGTAATGCTAAAAACTATTTGATCATTGCTGATCAGA
ATTATGCTGGACATATTGTTGATTATGTGGATTTACAACGTAAATTAAAA
AGACGTAATTTTGATAAGATTCATGTTTTGGCAGCATCTAATAAGAACTC
GTACACATGGAAAAGAGATTTTACAAGATCGTTCATTGAGAAAGATGATA
ATCGTTTAGATGACCCTGGCTCACAAACGTCATCCGCCAGACGTATCTCG
TCAATAGCAAAGTTTCCAAACCTGAATGCATGTATCTTCCACGAAACAAT
GGAAAATGCTTATTAACTGCACAACTGAGTCCTCGTAAACGCCGTGAAAG
ACTGAGGCGAGCTTGTTCCTTCGATTTCATTCCTTTTGTATATGACACCA
CTGCAGTAGGGCACCAACAACTCAAATGCCACTCCATAACCAGGAAATTT
GCCAAATGTCCTAAAGCTGATGTTATTGATAAAGACAAATGCAAGAATAA
ACTTTGTCCGCCAAAGTCGACAACGAAGAAGCCAGATAAAGGGCGTAAAT
GTGGGTGGTCGTGTGATTACGCCCTCTTGGTATCAGGTGGATGGAGTAAA
TATATAAACCGGATAAGACATCTACATAACATCCAGGAAGTTTTCAAACA
TTTGCAAACGAGCCGGTCATTTGATAAAGAAAACATCAAAGTCTTTTTCG
CCAATAATGCGACTATTGAACATTTTGGACACAGTCTAGTGGTATCTCTT
GTCAAAGTTGACATTCCGAAAACCAAATGTGATCAACTCAGTGGAATCTA
CTATACATCACCTAATGGATTTATCATCTTTATCATTACTACTGATCTGC
ATTATCATCAGTTTCGCAGCTTTGGAAGGAACGAAAACGGGACACGACTT
AATTGTATATCATCGTGCAAAGAAAGTTTTGGAACTTATTCAAAAACGTT
CTTGTAGGGAGTTGATGTCATCCAAAAATTGTACTTTCATTAAAACACGT
CCGTCAACTGATATGAACTTTTACATGGCAGAGAAATTAAGTAATACAAG
TTCACTTAGCATGCTGGTTCCTTTACGACCAAGCCCCTTTGATTTATATA
AACACTTAGACGCCGTTGTTGTTGTAGACCCGATGCCAGATGCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001468XLOC_001468Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002734-exon-sc0000021-1575043694:777938..778734TCONS_00002734-exon-sc0000021-1575043694:777938..778734Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1575043694:777782..777874TCONS_00002734-exon-sc0000021-1575043694:777782..777874Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1575043694:776489..776947TCONS_00002734-exon-sc0000021-1575043694:776489..776947Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1575043694:773547..774031TCONS_00002734-exon-sc0000021-1575043694:773547..774031Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1575043694:770935..773155TCONS_00002734-exon-sc0000021-1575043694:770935..773155Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1510915933:777938..778734TCONS_00002734-exon-sc0000021-1510915933:777938..778734Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1510915933:777782..777874TCONS_00002734-exon-sc0000021-1510915933:777782..777874Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1510915933:776489..776947TCONS_00002734-exon-sc0000021-1510915933:776489..776947Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1510915933:773547..774031TCONS_00002734-exon-sc0000021-1510915933:773547..774031Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1510915933:770935..773155TCONS_00002734-exon-sc0000021-1510915933:770935..773155Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1491911889:777938..778734TCONS_00002734-exon-sc0000021-1491911889:777938..778734Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1491911889:777782..777874TCONS_00002734-exon-sc0000021-1491911889:777782..777874Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1491911889:776489..776947TCONS_00002734-exon-sc0000021-1491911889:776489..776947Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1491911889:773547..774031TCONS_00002734-exon-sc0000021-1491911889:773547..774031Clytia hemisphaericaexon
TCONS_00002734-exon-sc0000021-1491911889:770935..773155TCONS_00002734-exon-sc0000021-1491911889:770935..773155Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Putative cnidarian restricted proteinTCONS_00002734-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:770935..778734 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.230615 0.11694 0.104445 0.0817468 1.8411 1.72028 2.45495 2.07624 1.74124 2.48417 0.775696 1.58503 2.82823 2.45293 1.26236 0.837559 2.41678 3.05913 4.23616 5.18191 1.94431 2.8451 0.930752 1.17312 1.59455 1.60872 2.41591 0.634456 0.685984 0.365102
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002734 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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