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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002632 ID=TCONS_00002632|Name=TCONS_00002632|organism=Clytia hemisphaerica|type=transcript|length=559bp
AGAATGTACGGAAACAAAACCTTGTAGTATGGAACGAGCTCATTGCAACA
CTATGGGACACCCAATCGATAGATTCAACTGCTTTTCTGATCTTTGTGAA
AAGAAGTGCAAACTTTGCAGACTTTGCAATGatgGAAAGAAATATGCTGA
AAGGGCGCCAATGGCTGATAGAATGAAATGTCTTGAAGAGCATAACAGAC
TTCGTGCCACACTAAAAGACACACCCAATCTGGAATGGGATGATGAATTG
GCCGCTTATGCACAATCATATGCGGAAAAACTTGCGAACACGGTGGACTT
CAGACATAGTAAGGTTGGTGAAAACATGTATATGAAGTATGGTGGAGATG
GCTCTACATCAACCAGTTGTATATCTGCCAGTGATGAATGGTTCAAGGAG
ATCAATTACTATAGCTACTCAAACCATGGACCTATCAATCCTGATAAAGA
AACTCGACATTTCCAACAAATGGCTTGGAGAAGTAACATTAAAGTTGGCT
TTGGAATTGCAGTACATGCTATAACCAAAACAATTTACGTCATTGGGGAG
TATAAAACC Run BLAST on NCBI protein sequence of TCONS_00002632-protein >TCONS_00002632-protein ID=TCONS_00002632-protein|Name=TCONS_00002632-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
ECTETKPCSMERAHCNTMGHPIDRFNCFSDLCEKKCKLCRLCNDGKKYAE
RAPMADRMKCLEEHNRLRATLKDTPNLEWDDELAAYAQSYAEKLANTVDF
RHSKVGENMYMKYGGDGSTSTSCISASDEWFKEINYYSYSNHGPINPDKE
TRHFQQMAWRSNIKVGFGIAVHAITKTIYVIGEYKT Run BLAST on NCBI transcript from alignment at sc0000021:561429..563845+ Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002632 ID=TCONS_00002632|Name=TCONS_00002632|organism=Clytia hemisphaerica|type=transcript|length=2417bp|location=Sequence derived from alignment at sc0000021:561429..563845+ (Clytia hemisphaerica)
AGAATGTACGGAAACAAAACCTTGTAGTATGGAACGAGCTCATTGCAACA
CTATGGGACACCCAATCGATAGATTCAACTGCTTTTCTGATCTTTGTGAA
AAGAAGTGCAAACTTTGCAGACTTTGCAATGGTCTGATAGTCAAATTATC
TTTTAATTGAAATAAAGACACGGTATTACTTAGCCCCCAGGCTCCTAAAG
GGGAGGCTTTTATttgaagggggcgtttatttgagagggatgtttattga
aaatttttactttagggAGGGGCaattattcgagggggcgtttaaaagaa
ggggcgtTCATTCGAAGTAAACACGGTATGGTTATTTCAAATTAGGCATT
GTTCTGAAAGTACAAGAAGAAGTTGAGTCTTTGGACTAAATTTATAAGTT
AGCATTTTTTTTAACCTTGTATGGAATTTAGGTATAAGTGATACAGTTCA
CTTAACTTGCCATTTTAAGGTTTTCTTATCATCAGATTCGCATTGGataa
aatgttgttttgttttgtttttgttttagatgGAAAGAAATATGCTGAAA
GGGCGCCAATGGCTGATAGAAGTAAGTTCATGTAATTACAAGTTCAGCGC
TTGATAAATATGGAAGAGATAGTTAGAGGAAAATAATCCATTCGATATAA
ACAGAACAGGCCCTGTCCAGGACAGCATCCCCTACCCTAGGAGAGGGAAA
TCACTACGCTTACTTGACTCTGCCAACTCGTATTCGCGACAGATAGAGCT
TTTGGTGTATAGCTACTGTACTCGAACGACTTGGGAAGAAAGTGCATTCT
CACATGGTTGATCTTGAAAAGTAGTCAGACATATGGTCTTGTATCAGAGC
ATGGTACCCAATTCTCCTCACATGGCACGGGCGACCTACTTGCCAAATGA
ATAacagcaccgagtgggaatcgaaacCCGCCCTCCTGCGCGGAAGTCAA
GACTGATAACCAATACACTAGGTTCTGAACATCCCTGACAAAATAATCAG
CCAAAGGGATGCTTCTTTATCAATATAGACGAAAACATTCTATCCCAgct
tgcacacaacgttgtttttaACATTCATCCAATATTCACGACATCTatat
aatgttagatgaacgttgaaacaactgTGTGTACCTGCTGGGTATAATAA
CGTTGTTTCATTTCCTCTTTTTAGTGAAATGTCTTGAAGAGCATAACAGA
CTTCGTGCCACACTAAAAGACACACCCAATCTGGAATGGGATGATGAATT
GGCCGCTTATGCACAATCATATGCGGAAAAACTTGCGAACACGGTGGACT
TCAGACATAGTAAGGTTGGTGAAAACATGTATATGAAGTATGGTGGAGAT
GGCTCTACATCAACCAGTTGTATATCTGCCAGTGATGAATGGTAAGATCA
AGTCAAAATTAGTTTATATGATGCTTGAAATATTCAAATGCTTTTCATGC
TTTGTTatgttacgtaatttccgcaaTTATGTAAGCAAAAATTTGATTCG
CGTAAAGGATTGCCTCTACAAAATTACGAAAGTACGTAATTTAAAACTTA
ACAtaaaaaacctcttttcctGGAATATAATTTTATGGATCTGTCAGTTA
CTAAGCTGGTAAAACGTCAAAACGATGTCAGTCTCCATAACTCCCGTATT
ACACGCTCGATAAAAGTTGTGTGTCTTCAGGGAACAGAAACCTCGATATT
GTCGTCAGTAGATCTTATTTTACCGGGCTTTTTCTAAACTAAAATTCTTG
TTATAAGATAATACCCTCGGTTAGATAAGAGGGTTTTTCTAATAAAGTGT
TTCATACAcccacttctcacagacccactctgaccccttcccactggaaa
aataggccaaaaatcgtccccagtggaaaattatactccaatttttgtgt
GCCCACGGAAgacaatcaaataaaccaatcctcactgcaaaaagttttgc
tattttttccatccccactgaatttcctttcttgaaaacaatggaactcG
AAGCCCAACCATAAAAAATaagggaatatcaatccctatcaagttttggt
ccgttatttttacctccactggctgaaaaaatcctacctgGTCTGTGGAG
AATTGGGTGTTTCATATTATTCCTCTTAATAGTGACATCGATGTTATTGG
TAAATAGCCCTTACTTATCAAGTTTTTCAGTTAACCAATACGTTGTAAAT
AtacttccataatggtggaagttAAGTTATTTTCTCATCATTATCCAGGT
TCAAGGAGATCAATTACTATAGCTACTCAAACCATGGACCTATCAATCCT
GATAAAGAAACTCGACATTTCCAACAAATGGCTTGGAGAAGTAACATTAA
AGTTGGCTTTGGAATTGCAGTACATGCTATAACCAAAACAATTTACGTCA
TTGGGGAGTATAAAACC Coding sequence (CDS) from alignment at sc0000021:561429..563845+ >TCONS_00002632 ID=TCONS_00002632|Name=TCONS_00002632|organism=Clytia hemisphaerica|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000021:561429..563845+ (Clytia hemisphaerica)
GAATGTACGGAAACAAAACCTTGTAGTATGGAACGAGCTCATTGCAACAC
TATGGGACACCCAATCGATAGATTCAACTGCTTTTCTGATCTTTGTGAAA
AGAAGTGCAAACTTTGCAGACTTTGCAATGatgGAAAGAAATATGCTGAA
AGGGCGCCAATGGCTGATAGAATGAAATGTCTTGAAGAGCATAACAGACT
TCGTGCCACACTAAAAGACACACCCAATCTGGAATGGGATGATGAATTGG
CCGCTTATGCACAATCATATGCGGAAAAACTTGCGAACACGGTGGACTTC
AGACATAGTAAGGTTGGTGAAAACATGTATATGAAGTATGGTGGAGATGG
CTCTACATCAACCAGTTGTATATCTGCCAGTGATGAATGGTTCAAGGAGA
TCAATTACTATAGCTACTCAAACCATGGACCTATCAATCCTGATAAAGAA
ACTCGACATTTCCAACAAATGGCTTGGAGAAGTAACATTAAAGTTGGCTT
TGGAATTGCAGTACATGCTATAACCAAAACAATTTACGTCATTGGGGAGT
ATAAAACCGAATGTACGGAAACAAAACCTTGTAGTATGGAACGAGCTCAT
TGCAACACTATGGGACACCCAATCGATAGATTCAACTGCTTTTCTGATCT
TTGTGAAAAGAAGTGCAAACTTTGCAGACTTTGCAATGatgGAAAGAAAT
ATGCTGAAAGGGCGCCAATGGCTGATAGAATGAAATGTCTTGAAGAGCAT
AACAGACTTCGTGCCACACTAAAAGACACACCCAATCTGGAATGGGATGA
TGAATTGGCCGCTTATGCACAATCATATGCGGAAAAACTTGCGAACACGG
TGGACTTCAGACATAGTAAGGTTGGTGAAAACATGTATATGAAGTATGGT
GGAGATGGCTCTACATCAACCAGTTGTATATCTGCCAGTGATGAATGGTT
CAAGGAGATCAATTACTATAGCTACTCAAACCATGGACCTATCAATCCTG
ATAAAGAAACTCGACATTTCCAACAAATGGCTTGGAGAAGTAACATTAAA
GTTGGCTTTGGAATTGCAGTACATGCTATAACCAAAACAATTTACGTCAT
TGGGGAGTATAAAACCGAATGTACGGAAACAAAACCTTGTAGTATGGAAC
GAGCTCATTGCAACACTATGGGACACCCAATCGATAGATTCAACTGCTTT
TCTGATCTTTGTGAAAAGAAGTGCAAACTTTGCAGACTTTGCAATGatgG
AAAGAAATATGCTGAAAGGGCGCCAATGGCTGATAGAATGAAATGTCTTG
AAGAGCATAACAGACTTCGTGCCACACTAAAAGACACACCCAATCTGGAA
TGGGATGATGAATTGGCCGCTTATGCACAATCATATGCGGAAAAACTTGC
GAACACGGTGGACTTCAGACATAGTAAGGTTGGTGAAAACATGTATATGA
AGTATGGTGGAGATGGCTCTACATCAACCAGTTGTATATCTGCCAGTGAT
GAATGGTTCAAGGAGATCAATTACTATAGCTACTCAAACCATGGACCTAT
CAATCCTGATAAAGAAACTCGACATTTCCAACAAATGGCTTGGAGAAGTA
ACATTAAAGTTGGCTTTGGAATTGCAGTACATGCTATAACCAAAACAATT
TACGTCATTGGGGAGTATAAAACCGAATGTACGGAAACAAAACCTTGTAG
TATGGAACGAGCTCATTGCAACACTATGGGACACCCAATCGATAGATTCA
ACTGCTTTTCTGATCTTTGTGAAAAGAAGTGCAAACTTTGCAGACTTTGC
AATGatgGAAAGAAATATGCTGAAAGGGCGCCAATGGCTGATAGAATGAA
ATGTCTTGAAGAGCATAACAGACTTCGTGCCACACTAAAAGACACACCCA
ATCTGGAATGGGATGATGAATTGGCCGCTTATGCACAATCATATGCGGAA
AAACTTGCGAACACGGTGGACTTCAGACATAGTAAGGTTGGTGAAAACAT
GTATATGAAGTATGGTGGAGATGGCTCTACATCAACCAGTTGTATATCTG
CCAGTGATGAATGGTTCAAGGAGATCAATTACTATAGCTACTCAAACCAT
GGACCTATCAATCCTGATAAAGAAACTCGACATTTCCAACAAATGGCTTG
GAGAAGTAACATTAAAGTTGGCTTTGGAATTGCAGTACATGCTATAACCA
AAACAATTTACGTCATTGGGGAGTATAAAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002632-exon-sc0000021-1491911889:561429..561559 | TCONS_00002632-exon-sc0000021-1491911889:561429..561559 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1510915933:561429..561559 | TCONS_00002632-exon-sc0000021-1510915933:561429..561559 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1575043694:561429..561559 | TCONS_00002632-exon-sc0000021-1575043694:561429..561559 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1491911889:561958..561999 | TCONS_00002632-exon-sc0000021-1491911889:561958..561999 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1510915933:561958..561999 | TCONS_00002632-exon-sc0000021-1510915933:561958..561999 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1575043694:561958..561999 | TCONS_00002632-exon-sc0000021-1575043694:561958..561999 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1491911889:562603..562819 | TCONS_00002632-exon-sc0000021-1491911889:562603..562819 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1510915933:562603..562819 | TCONS_00002632-exon-sc0000021-1510915933:562603..562819 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1575043694:562603..562819 | TCONS_00002632-exon-sc0000021-1575043694:562603..562819 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1491911889:563677..563845 | TCONS_00002632-exon-sc0000021-1491911889:563677..563845 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1510915933:563677..563845 | TCONS_00002632-exon-sc0000021-1510915933:563677..563845 | Clytia hemisphaerica | exon |
| TCONS_00002632-exon-sc0000021-1575043694:563677..563845 | TCONS_00002632-exon-sc0000021-1575043694:563677..563845 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021 | supercontig | sc0000021:561429..563845 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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