TCONS_00002618 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002618
Unique NameTCONS_00002618
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2331

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002618 ID=TCONS_00002618|Name=TCONS_00002618|organism=Clytia hemisphaerica|type=transcript|length=2331bp
CTTTGGGACACTCCTTATGACGCAGGAatttgaaaacatatttttgcgTG
GTCAAATTGTGAGCGGGAAGATAGAGAAACTCGAAAATAGAGTGGGCATT
ACAAATGGAAAGTTTTTGTATAAATTTGctgcaaaatgttttgaaattaa
tttcattTGTGTACAGAATTTTTAAACTAGGAGAGTTGGAATAAAGGGAG
TATATGTTCAATATAGAAGAAATTTAGcatctgttttgaattttgttcGT
TCAGggtcatgaatatttttctacgcttttgaaattgtaaaaccatataa
gaaaataaagcttccatggccaaaatgttaagaatgagttaagaacattt
taaggcttcgcggactcgaaAATTTTATGCCTGAGTTAATTTAGTGAATT
TCGAAACTGATGCAGAGTCATGTGACTTTTAACATAGACTGGGTGGTCCG
GGCAATCAGAGCAACTGAAATCTTTCACCATGTTAGtttttaaaagtaca
aaaatagcaaaatgaatttatttaaaacGTGGTTATTGGCATTATTGATG
TCACTGATGGTAACCGCATCATCGGCAAAATCTTTGAGCTCAGAAACAGA
CTGGGAAGAGAGATTAGAAGAAGAAGTGGAAATTCTCAGAACATTAAGAG
AAGAAATTGAAGATTCAATGAGTAATGATCAAGAAAAGCACATACCAGAT
GAAACAGATATCGACCAAGAAGCTGGTACCAACGAAATACTTGGCAACGG
AACAAAAAAAGACGGATCAACGATGACTGAGGTTGAAATTAACGAACTCT
TAGgTTATGAAGGTGACGAGATGATATTGTCAGAGGAACAACAAAAAAGA
GGAGTGAGCACTAGTATACGTTTATGGAGAGATCAAAACACTGGCGTTAT
TCATATCCCTTATGAGATTGATAGTAGTATTGCTTCAAGTGACCATCCGA
AAATCTTGCGACATATTTCTGAGATGAATGAAGCTATTCGATGCAGTCAA
GAAGCTTGGAAACCAAAAACTCCTCAAGACAAACACTATGTTCTCTTTCG
AAATTCAGCTGGATGTTCAAGCTATCTTGGCATCACAAAATTTCAAGATT
CAAAGGACCCATCAAAAACTTACCAACCAATCAGTTTAGCTGCTGGGTGC
ATTAGATTCAACCAAGGAACGGTTTTGCATGAGATGTTACATTGTATGGG
TTTCAGTCATGAACAATCAAGAAGTGACAGAGATGAATATGTCACCATCA
ATTGGAGCAATATAATTGCAAATAGAGAACGTAATTTCCAAAAGGTCTCA
AACATGATGGATGGAAGCAAAGAAACAgATTACGATTATGGTTCAGTACT
CCATTACGGTCGAAATTCGTTTGGAAAAACTGTAAATGGAGTCAAACAAG
AAACAATCACTCCCAAAGATAGTAACGCTGCGATTGGACAAAGAAATGGA
ATGTCAAAGCTGGATATCGAAGAATTAAATCTTATCTACTGCCCGGAAGC
ACCAGAAACAACATCTGCCGAAACAACACCTGCCAAAATGACCACCCCTC
TAACTACAACGACAACCATCTCTACCACAACAACGACTACCCCTACAACG
ACAACGACTACGACCACCCCTACAACAACAATGACGACGACAACCCCTAA
AACGACTACGACCACCCCTAAAACGACTACGACCACCCCTACAACAACAA
CGACTACGACCACCCCAACTACCACTACGACAATCCctaccacaacaaca
acaacgaccacccctaccacaacaacaacaacgaccacccctacaACGAC
AACGACTACGACCACAACCCCAAGCACAACAACGACTGTGCCTGCTACGA
CAACAACGTCCACATCACCTAAACCAAAATTACAATCACTGTTCCGGTGT
TCTGGTGTTTGTCAAGCGAACCAGTGTTACCAGATAAGCTCAAGAAGATT
GACAGCGAActcaaaagGTTACCAATCGACCAACGCCTGGCGCAGTGGTT
TTATTGCATTCCGTTTTAAAGATTGCTTGATGAAGAAAATCTGTTCTGAT
GATGATTTTTACAATCTACAAACCAAGAAACTTTGCTTGAGTATTGATCA
CAAGCGTACCAAATGGTGGTGGTCACCTAGACTAGTAGTCTATTCAAGAG
CCTTCGTCAATATGCGACATGTGAACTACGCACCTAGGCGTACCAATGGA
ACTTATAAACTTGACATTAATATGAAATGCAAAAGTAGTAATTGGGGGTA
CACTTCAAATAAACAATATCTCATTACGTGAGGGAAAATGCTGATTCAAA
TTTGATTACGAGCAGCAAAGCAGCCAGATGA
Run BLAST on NCBI

transcript from alignment at sc0000021:407448..419325+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002618 ID=TCONS_00002618|Name=TCONS_00002618|organism=Clytia hemisphaerica|type=transcript|length=11878bp|location=Sequence derived from alignment at sc0000021:407448..419325+ (Clytia hemisphaerica)
CTTTGGGACACTCCTTATGACGCAGGAatttgaaaacatatttttgcgTG GTCAAATTGTGAGCGGGAAGATAGAGAAACTCGAAAATAGAGTGGGCATT ACAAATGGAAAGTTTTTGTATAAATTTGctgcaaaatgttttgaaattaa tttcattTGTGTACAGAATTTTTAAACTAGGAGAGTTGGAATAAAGGGAG TATATGTTCAATATAGAAGAAATTTAGcatctgttttgaattttgttcGT TCAGggtcatgaatatttttctacgcttttgaaattgtaaaaccatataa gaaaataaagcttccatggccaaaatgttaagaatgagttaagaacattt taaggcttcgcggactcgaaAATTTTATGCCTGAGTTAATTTAGTGAATT TCGAAACTGATGCAGAGTCATGTGACTTTTAACATAGACTGGGTGGTCCG GGCAATCAGAGCAACTGAAATCTTTCACCATGTTAGtttttaaaagtaca aaaatagcaaaatgaatttatttaaaacGTGGTTATTGGCATTATTGATG TCACTGATGGTAACCGCATCATCGGCAAAATCTTTGAGCTCAGAAACAGG TGAGAGTTTGTTTGAATTAGAAACTGATCTCCCCCGCCTGACTCAAATAG TCTTTAACTTTAGTAAAGGGGGACAAGTTGAGCAGGTTTTGATCATGGCA CCATCAATTTACGATTGACGCTCTCTGACTCGCTATTCTAATGTCCGATA ATGTTAAAAGTTACCGTCAACAAAGACCTCTCATAAACGATGTTGTACTA TATCGATATGCTCacttatttgatgaaaatccaatttcccttgaaaattg aattagagagcgtcgactGTATGTTATTTTACCTTGATTTCTACAATATA GTTCAACCAGGGACCCCAATCGAACAAACTTTAAATCTTAATTTCACTTA AACAAATCCCCAAAGCCCTGCTGTTGATTCCGCTAATATGGGNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNgggggggggggggccgtacggggtt tgcgatttccgaaataccaaataatattgtcaaaatttccgaaattccgt aaaagaatacttgcaattccgataccgaatttttgaggtatttttcctcg ttttgactaatttttcataaaatttgatttttcatgtacgaattccgaaa aaaggggataaaaaatttcgaaatttcggaGCAAAAATTCATGCATTTCT GATACCGACACAATTTCAGAATTctgaaataccgaaggaattttcccgat ttccgaaattccgaagaaaaacgGGTCGAtctccgcaattccgaaatccT GTACGCCCCCACTATTATGGGAGACACAGATAGAAGTGGGAGTGTAAAAA AACTCTAGAAAAGAGTTCAGATAGCCTTTGGGATAAAGTAATGATGGGGA AGtgaattatgaaatattttgacACTTTTCAGACTGGGAAGAGAGATTAG AAGAAGAAGTGGAAATTCTCAGAACATTAAGAGAAGAAATTGAAGATTCA ATGAGTAATGGtaattttgttttagttcttcTCGCGTCAAATTCATTCTG TTTTATCATGATCATTTCTATCATTTTTAACATCCGTAATTATTTTTTGA GTATCGCCACAAAGAAGTTCCATTATTCATCcaataatattgaaagccac catcatcaagaaactctcataaacgacgctctattatttgatgaaaatcc aattcccctggAAAATCGAATTAGACAGCGCCAATAGAACTTttaataaa ttacgtcacaaacatcacttgtttcgtattcaaacaattatcgTGGTGag tatgtcccttgagacataaatgatttttctatgaatagaaagtagtttca ataaaaactgctgggagttaatcaccatggcaataatttcaaaacgaggc aagtgatgtttgtgacgtaatttatgaaaaggttattatacttttttggc aaaattaagttcgaaaatagaaaaggaaatgctgaaaatatATTACTAAT ACTGGAAAATAGTCATGGACTTTGATACTTTTTGACCAACACTCAATTTT TTGCCTGTAGATCAAGAAAAGCACATACCAGATGAAACAGATATCGACCA AGAAGCTGGTGAGTTGGATTTATCGATTTTTGAATgaataaatattataa attgTGCCTTTAAAATACGGCTTTTTACCTCGAGCCATCTTGGAAGTAca gaccattgagtttaaagcccgaaggatctagcagttcctttgtttttgag gactgcattttttgaaattactttcaatccagcgtttgtgtaaaacCCAT GCGCGGGCGTTCTGTatggaaaataagtggcttcatttctcaTCAAGAAG TCTCGatagtctagcccttcgggcttggaagtcaatggtcaGACTATCTA TTTTTGTCATCCACTCCTAGTTTGCATAACTATAAAACTAACACACGATT TCAAGAGTTAATGGCGGAGAATAAAGGTTTTCCATGTAATTGAAATAATA ATATCTCGTATTAGTCTAGGGTGACCCTTACAAGTAGTACTTATATGATA TGCACctctgcaatgtcttctgaaatTACACCACGGACCTCTGAcctagc tgattggttgtaagtgacgtaaaatcagtcaatacatcacCTTTAACCAA TCacctgttgggtccgtggaagacattacaatggtgcaAATCATGAATAT ATGGGTCCCATGGGACCCCAAAACAGGTTTTTGCCAAGCTGATAAGGATT GGTAAAATTTTACAGCTCTATACATATGACTCTGAAAGATAAGCAGAATT AAGAGATTAAGCCAAGTCATTTTACTTAACCTTAGGTACAAACGAAATTC TTGGGAATGAAATCAAGAAAGAAGATGCatcaggtttgtttttgtaGTCC ACATGGTTTTAGATTTGCAGGACTCTATTGAAAGTCAAATACAATTTGGC GAAAAATAGTTTAGAAAAGAATGTGTGTCTAGATTCGACACTCTTGGCAA TAACTCCTAACCACTTAAAATTCTCCTTTACTTTTGTCTGTAGATCAAGG AAAGCACATACCAGATGAAACAGATATCGACCAAAAATCTGGTGAGTTGG ATCACTATCTATTTATCAATGAATGATACTATAAATTATGCCTGTTACAT TACGACTTGGAGGCTTACCTTTCTTCTCTCTATTAGAAAAGTCCCTTCGA GATTATCTTTCTAACTGGGCATAACTTTttagcatagcaaaaatgagcgC TGAGAAATCTTTAGATGTCTGAGACAGACAACCACCTATAAAGGTCTATA TAGAAACTCGCAGAATCTAGAAAAGCTTAGATTTTACCTTATTTTCACCT CAAAACAGGTACCAACGAAATACTTGGCAACGGAACAAAAAAAGACGGAT CAAGTATGTTACTGTAGTAGTAAATTcattttagaatttcaaaattcttt taaaagccAAACTCAATTTCGAAACAAATTAAATATAGAATTTTGTCCAA TTTTTACTTGAAGAATTCTAAAGATTTCGTCTCGCAGACGAAGAGATGCT CAAAGAGCCCTCTATCTATATCAACATCTTTCTCCTTTTTCAGCGATGAC TGAGGTTGAAATTAACGAACTCTTAGGTAAGCTACTTGATAATTATTTCT CTATTATTCATGTTTAGAGCTATTTTCAGCGACTCAACCGACTTCTACTG AAATAGGCAATCAATGGAGCATAACAAAAGTTTAATAAATTGAATACACA AGGCTGCCTTCCTATTCAATTGCTAAACCCcagtgtcacagacccgctgg gattccatccccactggaagaattggccgaaaatttcttccccggtggga aaataccctggaattccTTCCTTTTATTTCACCCCtgcttgaaattcaat gttcaaaaattgcactccTAAACCATTCCCAACtggattttttaaacttt gaacaatagaattgctACTCCTATTGGGATTTAAATAGGGAAATTTTATC CCCCACTTGGGATAAAAGTTACACCGGAGCTGTAAGAAAGGGTTGTATTG CTTCAATAGACGATGTCgactttccgaattctccccgaatgattacccat gatgcattacaccaaaaattcacggaaagtcaatatcgtccgtgaatttt tttgcgcaatgcatcatgggtaatcattcggggagaattcggaaagccga tatcgtctattgacaAACATCAAACCCAGTCGAATGGCAAACTTCGATCA AATGAATAGAATCGTAATGTTTTGTACGAAAGCACGGGCGTTTGCCACTT AGTAGtcttttttgtttaaattcaaagttAGTCTCAAACACTCGGTTTCT TGCGGTGCttaaaaacattacgtcacgaaTATCAAGAAATCGTAGATTAA AATTATCTGGTACGTATAATggaataaatgaaaaaaaattactgacNAAT CGTAGATTAAAATTATCTTGTACGTAAATGGAATAAATGAAAAAACTgct gaaaattgcattttcaggTTATGAAGGTGACGAGATGATATTGTCAGAGG AACAACAAAAAAGAGGAGTGAGCACTAGTATACGTTTATGGAGAGATCAA AACACTGGCGTTATTCATATCCCTTATGAGATTGATAGTAGTAGTAAGTC ACTTTACTTTAAGGTAATCAAACCTTTCTAATAAGTTACTGTTAAAAAGA CAAAACTTCCAGTCAAGGGTCCAACTTTAATCTTCCATTCTGCTGCAGCG TAATTTAATTCCTATCAACCTCAAAATCAGGATAATCGAAATTACAATCC AGTAGGGATTCTCTTAGAACTCTTGTCGTATGTATTCGATATCAACCCGG TACTTATTGAAGGTTTAAATTGTAAATCAGAATATCCAACGAACGAATTG ATATCACGAGTTTTCGCAAACAAAACCATTGATCGGAGGGGAGAGGTTTC CGAAGGTACCAAATTATACCGCTAAATTTTCTGACGAACCAGAATATCGG ATATTTGGCATTCTAATAATCGAATCGAATGATACCAGTCATTGTTACGT CAAATACCGGAATACTGGTAAATACCGGATCCTCGGAAGCTTCTCCCTAT TGATctagacggtactaatcgaacgttcgattgtgatcgaagtaatcaat aatgatcgataataatcgaaaGGTGGTCTATcggtgatcgaatactcact cGACTCCAGATTATGTCATTTTCTTCCACCATtttcgattacttcgatca ttatcgattacttcgatcattatcgattacttcgataaaAGAATTTATCG GTAAGTACCGTCTGGATTGATCAATCTTTCTTTCAATTCAGTTGCTTCAA GTGACCATCCGAAAATCTTGCGACATATTTCTGAGATGAATGAAGCTATT CGATGCAGTCAAGAAGCTTGGAAACCAAAAACTCCTCAAGACAAACACTA TGTTCTCTTTCGAAATTCAGCTGGGTAAGTGGgaccaaaaaagaaaatca actgtttgcaaaaaaattttattttattgcaaGAAATTCGAAGAACTTCA TAACAACATCTATCTAATGTCtcttcatataacgttagatgaacgttgaa acagcgtTGATTACTAGTTGTGTTTAGTGGTTTACCTACACCACTGTTGA ATCCGATTTGGTTATCATGAGCAATGTTCTTCGATAGTTCTAACGAAGTG GCCTGCCTCCTATCGAAGTATAACTATGAACCATGGTATAACTATCGTTT AATTCGTAGCTTCCTTTAATTTCGAGCGAACTTGATTCCTAATTCGAATT TCGACTACAAGTGATACATAGCTGGAAAAAATATTGAGATTGCTGTTGAT TTTTTATAGATGTTCAAGCTATCTTGGCATCACAAAATTTCAAGATTCAA AGGACCCATCAAAAACTTACCAACCAATCAGTTTAGCTGCTGGGTGCATT AGATTCAACCAAGGTAGGAATGTACTTACTTAGAGGGAATTCACGCTTAA AGGACGTTATAGAATGTacagtagcgagtttatgtatttgcacctTTGAG GACGAGGGAGGTACTGAAGCGAGGACACAAAGAACAAGGACCATACAATA GCTGATTTGCCGTCGTCCTCATTTAGTtaggatgtagacaaattagaGTA TTAGCGACCCCGTcgaagaaaaaatacaaaaactcaGTAATATCTGAACG GTGGTCACAGAAAAGGTTAAACAGaatatgaaaaatatctaataaaaaaa gaaactcTCCCGGCATTAAATCTTAATACCTTCTTTAACCGGCGTTACTA TCACTTAGATTAAAGCATTATACCAATTTAACGTCTTCTTCTTTCATTTC AGGAACGGTTTTGCATGAGATGTTACATTGTATGGGTTTCAGTCATGAAC AATCAAGAAGTGACAGAGATGAATATGTCACCATCAATTGGAGCAATATA ATTGCAAGTATGCAACTCTTaatattgttaaccggttactttttcgaagc gggctacatggctttttgcgcaatgcaattggttcttttcgcatgacgac gggcctacattgtccagagttgcccNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaacctcgcaag ctcggtcgttacttgacctcgggcaatatttctcagtacagccctcacta accggtcattattgtattattgttaaccggttacatTTTCGAAGTGGGCT acacgactttttgcgcaatacaattggttctttttcgcatgacgacgggc ctacattgtccagagttgcccgtcgtcaggaaaattcattgtgacgtcac tttttcaaaggaaaatgaacaatgcgttgacatcatttctctcatttttt attgctgacgtcagaaattatagcaattttttatctcttttcgcttgttt tttctgctttattttactatttttcctggataaagcgctaaaaatcaatc gaagctgaaggaaacggttaacagatacaataatgaccgttttttttcgg gctgtactgaaaatattgccctcagtcaacgcaacaacctcgcaagctcg gtcgttacttgacctcgggcaatatttctcagtacagccctcactaaccg gtcattattatATTAGAGTTCCAACAAAGTTTACAACCAGTGTCCGTTAG CCTATACTACagtcatggttgaaatatattgagaatttcggttattttaa cgtttttcaagatttaaagttccgacgagaaagtcgattttggtttgggc tatctctttaatttaatcgaatatttcaattttggaggggttggcagact tccagtctatattctgagccttattggactattttcgaacttttggatcc tcagatcctaagttCGTAAAtgttaagtctagcgttaaactcagagttaa aattctacctttccaacctactttagagcacttacaaatcgattgtggtt tcaaaacttccctgtgaatttcccttttttctcaattattatgaccttga ttgtggACCTTGGCTACTTGGCTACATTGTTGGACCTTTACTACTTTTTC GAGGGCTTTTAGTGAAACGTATTTGGGGGCTCAAAACGTTTTATATGTCA CTTTAACAAAAACTTAGAAAGGAAAGAGTTCTTTCAAACACCCGGGGGGG gcgtacttaggcaaatggagggttacggtatgtgccgcccttaagggtac cttttttggatttccaaagtcccgctaagggtcagaaaaatcagaaaatc aaatttcagtcccactaagggtctttttaccccctgaaagatcaaaattt ggtcaaatttgtcccgctaaggtaaaattctcaaaatttttctttgtttt ctccttaGTCCCGGTCAGGGCCCAgagttcgaaagtcgggtggcaccccc cctgtcagcttgcaaccctagTGCCCCCCAGATTCAAACAAAAGTATTGA TTATAATCAAACTGGTAGCGATTACACTACGTCCaccaataaaatcaaaa aggtGGTCAAGTGGCTGTGGGAACGAGATTGGATTGAAATCCTATGAACT TTCACTTCTATTAATCTTCAATTTGTTTTAGATAGAGAACGTAATTTCCA AAAGGTCTCAAACATGATGGATGGAAGCAAAGAAACAGTAAgcatttgaa ttcaaaatttggtcaaagcaAAACATTTAAATTGTAGATAATGTATTGTG ATGTTCAGGGAATTGAACTCAGAATTTAGATAAGGGTGTAATTATGACAT TTGGCTTCTTACCAAATAGTCAAGTAGACCCTAacctttatcccactaaa accatcccaatccttttttgacgtgtttttctattgtctattggtgtgaa aaaaggactggaacagctttagtgggataaagcagaCAAGCAGacatgcc cgcgcggcaattggtagctacggttgaaaaggtgtatatcAAATTAGTGA AGTATTATCCTTAAATtaataatattttgacttttcatGGCTTGTACCCT TAAAAGAAGCCAAAAGGGGACcttatttgttatttttgtaacccttattA GAGAGAGTTGGGAAGGTAAAAACCAAGACTTACGTCcgcttatctgatat tccgatgacGGATTGGCGGCCACCCATNGAGAGTTGGGAATGTAAAAACC GAGACTTACGTCcgcttatctgatattccgatgacggattggcggccgcc cacgctaaagctcttaaggagcgggccaatttcccggagaggaatgatag tcggtcTTTGATGTGCCacatccccagtcgggttcaactacccttgcgCG TAAAGGTAAAAATTTctgttggacccgccaatccccgaaaacaagggctg ggttaccagacctcccgctgcaaaaccCTTGACGCGgccttgcaaaattc cgtaatctaagccttccagatgttgaaaattttcccgatctttagagctt tagcgtttCGGATGAAAATCTCACCATCTGGGTGCTACATAATACGCCCG TTTACATACCAAACCCATTAAATATTATCCTATTCaacttttcttttgta ttttatttaggATTACGATTATGGTTCAGTACTCCATTACGGTCGAAATT CGTTTGGAAAAACTGTAAATGGAGTCAAACAAGAAACAATCACTCCCAAA GATAGTAACGCTGCGATTGGACAAAGAAATGGAATGTCAAAGCTGGATAT CGAAGAATTAAATCTTATCTAGTAAGTCATGTACCATGAAAACACGGGAA AGAATTCCCAACAAATTTGATAACACGCTTGTCTCTGCCTTTTTATCTTT CTTACTTTTAATCAGTGTGTCCATCAAAACATgaatctcaatttttcttt catagCTGCCCGGAAGCACCAGAAACAACATCTGCCGAAACAACACCTGC CAAAATGACCACCCCTCTAACTACAACGACAACCATCTCTACCACAACAA CGACTACCCCTACAACGACAACGACTACGACCACCCCTACAACAACAATG ACGACGACAACCCCTAAAACGACTACGACCACCCCTAAAACGACTACGAC CACCCCTACAACAACAACGACTACGACCACCCCAACTACCACTACGACAA TCCctaccacaacaacaacaacgaccacccctaccacaacaacaacaacg accacccctacaACGACAACGACTACGACCACAACCCCAAGCACAACAAC GACTGTGCCTGCTACGACAACAACGTCCACATCACCTAAACCAAAATTAC AATCACTGTTCCGTGAGTAAAACACTAAACCTCAATCATgctatgaaaat atttatatcCTCACCTAAGTTTAATTTAATTTCTTAATGTTATTCAAGGG GTAAATTATCCAAAAAATTCGAACACTTTTCCAAAAATCTcacaaaaaat ctaaataaaccccgaaaaatttcaaaatatctttcaaCCTATCGTACact attttggaatattttaacttttgatGTTATCCATGCTGCTTTTTCTCCGC CCCCTCCTCCTATCCTATCACGCACAAAATTTTATCCTGACTCATAACTT CAATCCCTGGAAGTTTAGAGtaatttccgaaaaattttgataatttcttg ATTCAATTTTGTATGTCATTTTTCTTCAGGGTGTTCTGGTGTTTGTCAAG CGAACCAGTGTTACCAGATAAGCTCAAGAAGATTGACAGCGAActcaaaa ggtaaaaaaaaaattgaagaaaaaaaatgagaacaagGAATTATTACAGA CACTGGAGAAACAACGgactgatttttgccaatttttcatGTAAAAGCCT TGtgcgcagtaatgacattattgttcatcctccttccaccattaaatgat ttttcgtagtATTTTTATTGCAGCTCCTCATCATGGAGCAGTTATCCAAT TCCCAAGACTTTAAGCTTTCCTCCAAGATTCAAGAGGAGATTTCATCCCA ACTGTTgaaagaagttccaccggggctgtgagacaggtgtATCAAAAATA GTTCGAATTACGGAGGGTAATCGAAGGTAATTCACTCCCCAACTAACAAG GGGACCAatagttcgaattacaaaaagattcgaataatagagttTCGAAT gagagagagagttgactgtagcGTTTTATAGATATTTAAAATCGTCTTTT TTCCACCAGGTTACCAATCGACCAACGCCTGGCGCAGTGGTTTTATTGCA TTCCGTTTTAAAGATTGCTTGATGAAGAAAATCTGTTCTGATGATGATTT TTACAATCTACAAACCAAGAAACTTTGCTTGAGTATTGATCACAAGCGTA CCAAATGGTGGTGGTCACCTAGACTAGTAGTCTATTCAAGAGCCTTCGTC AATATGCGACATGTGAACTACGCACCTAGGCGTACCAATGGAACTTATAA ACTTGACATTAATATGAAATGCAAAAGTAGTAATTGGGTAAGCCCTTTTA GTTTAAAGTCAAGtagtttttctcgaaatattACCATTGACAACACACAA AATAGCGAGTTCATGTTGGAGATCTGGTCCTGTTTTTAAACGCAAATACA CACAGTTTTGTAACCTAACGTAACGTCAAGAATTTTGTCCTTTCAACCAC AAATTGTACACTTCTGTGGACGAAAAATTACCCGTTTCATGAAGCGTTAT ATTAATATTCAAAGTTTTCCTGATTTCCCGAATTTCTCAAACatgaaaac actaaacacaaaaatattccaGACGCATTTCCGAGGtcttttctctattt tttcagAACATactgacaaaaagttttttttgctgtGTGAAAATGCGTAT ACAACACCTTGCGGCTTTTGAAATGGCCGCGTACCACGTTGAAATTACTT GTAAGCCTACCCAAAGTTTTGGTCTTTTTTCTGTTGAAATATGGCAATAA AATAACAGGGAATTTTTGCCGGCAATGAGAAAAGTTATCCTGCTGTAAAA GCCAGTTGTATCATcagattttccaattttttgttcttttttttctcttt ttagcttGCCTTATTCGCACGAAGGAGGATTTGGTATTCCAGGGGTACAC TTCAAATAAACAATATCTCATTACGTGAGGGAAAATGCTGATTCAAATTT GATTACGAGCAGCAAAGCAGCCAGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001418XLOC_001418Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002618-exon-sc0000021-1491911889:407448..408046TCONS_00002618-exon-sc0000021-1491911889:407448..408046Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:407448..408046TCONS_00002618-exon-sc0000021-1510915933:407448..408046Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:407448..408046TCONS_00002618-exon-sc0000021-1575043694:407448..408046Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:409030..409107TCONS_00002618-exon-sc0000021-1491911889:409030..409107Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:409030..409107TCONS_00002618-exon-sc0000021-1510915933:409030..409107Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:409030..409107TCONS_00002618-exon-sc0000021-1575043694:409030..409107Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:409658..409705TCONS_00002618-exon-sc0000021-1491911889:409658..409705Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:409658..409705TCONS_00002618-exon-sc0000021-1510915933:409658..409705Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:409658..409705TCONS_00002618-exon-sc0000021-1575043694:409658..409705Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:410956..411000TCONS_00002618-exon-sc0000021-1491911889:410956..411000Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:410956..411000TCONS_00002618-exon-sc0000021-1510915933:410956..411000Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:410956..411000TCONS_00002618-exon-sc0000021-1575043694:410956..411000Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:411191..411223TCONS_00002618-exon-sc0000021-1491911889:411191..411223Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:411191..411223TCONS_00002618-exon-sc0000021-1510915933:411191..411223Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:411191..411223TCONS_00002618-exon-sc0000021-1575043694:411191..411223Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:412115..412240TCONS_00002618-exon-sc0000021-1491911889:412115..412240Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:412115..412240TCONS_00002618-exon-sc0000021-1510915933:412115..412240Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:412115..412240TCONS_00002618-exon-sc0000021-1575043694:412115..412240Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:412939..413071TCONS_00002618-exon-sc0000021-1491911889:412939..413071Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:412939..413071TCONS_00002618-exon-sc0000021-1510915933:412939..413071Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:412939..413071TCONS_00002618-exon-sc0000021-1575043694:412939..413071Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:413457..413560TCONS_00002618-exon-sc0000021-1491911889:413457..413560Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:413457..413560TCONS_00002618-exon-sc0000021-1510915933:413457..413560Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:413457..413560TCONS_00002618-exon-sc0000021-1575043694:413457..413560Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:413950..414054TCONS_00002618-exon-sc0000021-1491911889:413950..414054Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:413950..414054TCONS_00002618-exon-sc0000021-1510915933:413950..414054Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:413950..414054TCONS_00002618-exon-sc0000021-1575043694:413950..414054Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:415779..415834TCONS_00002618-exon-sc0000021-1491911889:415779..415834Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:415779..415834TCONS_00002618-exon-sc0000021-1510915933:415779..415834Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:415779..415834TCONS_00002618-exon-sc0000021-1575043694:415779..415834Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:416758..416918TCONS_00002618-exon-sc0000021-1491911889:416758..416918Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:416758..416918TCONS_00002618-exon-sc0000021-1510915933:416758..416918Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:416758..416918TCONS_00002618-exon-sc0000021-1575043694:416758..416918Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:417053..417459TCONS_00002618-exon-sc0000021-1491911889:417053..417459Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:417053..417459TCONS_00002618-exon-sc0000021-1510915933:417053..417459Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:417053..417459TCONS_00002618-exon-sc0000021-1575043694:417053..417459Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:417827..417898TCONS_00002618-exon-sc0000021-1491911889:417827..417898Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:417827..417898TCONS_00002618-exon-sc0000021-1510915933:417827..417898Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:417827..417898TCONS_00002618-exon-sc0000021-1575043694:417827..417898Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:418357..418634TCONS_00002618-exon-sc0000021-1491911889:418357..418634Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:418357..418634TCONS_00002618-exon-sc0000021-1510915933:418357..418634Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:418357..418634TCONS_00002618-exon-sc0000021-1575043694:418357..418634Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1491911889:419240..419325TCONS_00002618-exon-sc0000021-1491911889:419240..419325Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1510915933:419240..419325TCONS_00002618-exon-sc0000021-1510915933:419240..419325Clytia hemisphaericaexon
TCONS_00002618-exon-sc0000021-1575043694:419240..419325TCONS_00002618-exon-sc0000021-1575043694:419240..419325Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:407448..419325 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0417975 0 0.0473253 0.00926008 887.496 646.197 652.578 536.416 108.437 271.188 131.717 240.016 0.0368755 0.381067 0.178079 0 0.167476 0.416749 0.35555 0 3.18098e-08 0.153751 0.325612 0.17117 0.233356 0.0560713 0.389726 0 0.0556704 0.0567575
Blast
BLAST of TCONS_00002618 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 103.219 bits (256), Expect = 3.122e-23
Identity = 71/209 (33.97%), Postives = 107/209 (51.20%), Query Frame = 2
Query:  875 WRDQNTGVIHIPYEIDSSIASSDHPKILRHISEMNEAIRCSQEAWKPKTPQDKH-YVLFRNSAGCSSYLGITKFQDSKDPSKTYQPISLAAGCIRFNQGTVLHEMLHCMGFSHEQSRSDRDEYVTINWSNIIANRERNFQK--VSNMMDGSKETDYDYGSVLHYGRNSFGKTVNGVKQETITPKDSNAA-IGQRNGMSKLDIEELNLIY 1489
            W    +GV+ +P+ + S         IL  ++E   +  C +      T QD+  ++      GC S +G          S   Q +SLA  C++  +G VLHE++H +GF HE +R+DRD Y+ +NW+ I+   E NF K   SNM+     T YDY SV+HYGR +F +   G+   TITP  + +  IGQR  +S  DI  +  +Y
Sbjct:   94 WPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERST-CIRFV----TYQDQRDFISIIPMYGCFSSVGR---------SGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNML-----TPYDYSSVMHYGRLAFSR--RGLP--TITPLWAPSVHIGQRWNLSASDITRVLKLY 279          
The following BLAST results are available for this feature:
BLAST of TCONS_00002618 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL3.122e-2333.97Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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