TCONS_00002558 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002558
Unique NameTCONS_00002558
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length173

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002558 ID=TCONS_00002558|Name=TCONS_00002558|organism=Clytia hemisphaerica|type=transcript|length=173bp
CAACATTCTCCTTCATTCTCTTTGCCTCTTGCAGGTCATCCCAAATTCCG
TATGCATGCTCTATACAACCTGGAATTCCTGGTATTCCTGCTTTTTGAAC
CGATTCATTGACAAAGCCATTTTTCTTGACGAAGTCTATAATTCTGTTTG
CCACAATCCCGAAAATAATTTTG
Run BLAST on NCBI

transcript from alignment at sc0000020:321535..321707

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002558 ID=TCONS_00002558|Name=TCONS_00002558|organism=Clytia hemisphaerica|type=transcript|length=173bp|location=Sequence derived from alignment at sc0000020:321535..321707 (Clytia hemisphaerica)
CAAAATTATTTTCGGGATTGTGGCAAACAGAATTATAGACTTCGTCAAGA
AAAATGGCTTTGTCAATGAATCGGTTCAAAAAGCAGGAATACCAGGAATT
CCAGGTTGTATAGAGCATGCATACGGAATTTGGGATGACCTGCAAGAGGC
AAAGAGAATGAAGGAGAATGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001377XLOC_001377Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002558-exon-sc0000020-1491911889:321535..321707TCONS_00002558-exon-sc0000020-1491911889:321535..321707Clytia hemisphaericaexon
TCONS_00002558-exon-sc0000020-1510915933:321535..321707TCONS_00002558-exon-sc0000020-1510915933:321535..321707Clytia hemisphaericaexon
TCONS_00002558-exon-sc0000020-1575043694:321535..321707TCONS_00002558-exon-sc0000020-1575043694:321535..321707Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:321535..321707 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002558 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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