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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002556 ID=TCONS_00002556|Name=TCONS_00002556|organism=Clytia hemisphaerica|type=transcript|length=728bp
ACACAGTTTGTTATATCTGGAGATTGTCCATTCCAAAATCCTACAGTCAT
CATTAACGACAAAGAAGTAAAACCGCAATCAACTCTCAAACACTTAGGAT
TCCACTGGGACACAAAATTGAGGAAAATCACGCTTGCCAGTCATCAGGAA
AATCGTATTTCGGAATTGTGGGCGGTAACTTCCTCTTTAATAGCCAGTGG
AGTAAGAAAGATGCACCCAAATATCATCTCGAACATATTCAGATCTATCG
TGCTACCAAAAGTCTTGTATGGAATGGAGCTTACAGTAACCTCCAAACCC
TTTCTTGAACGCCTGAACAGACAGTGCCGATCAGCCTTTAAAAACTTGCT
TGGCTATTCCAAATTTGGCGCTAACGACTTGAACAAACTCTACCAAGTGG
CGGATATTACACCGTTCATCGAGAATCGAAAAGTAGGCCTTCTCGCTCAG
CTAATGAAAAATtgtcaaacttcaaaatatcttcTTCACATTCTGGCTTG
TCATGACCGACAGTACTCGATTATCCCAAGTATAATGCAGATTTGTGCAC
GAGAAAGTATTAATATTGTTGAGCTAGTGCTTTACTACCAGAAACCCTTT
AGAGTTTCTAATCCTGGAGATTCAATGATTAATGAAATTGGTCTAGACTT
GGTTGAAAGATTGAGAACCCTTATTGCTAATTGGGATGCTCATGAATGCA
GAGTTGAAATGTGTGAAATCAttaacac Run BLAST on NCBI protein sequence of TCONS_00002556-protein >TCONS_00002556-protein ID=TCONS_00002556-protein|Name=TCONS_00002556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
TQFVISGDCPFQNPTVIINDKEVKPQSTLKHLGFHWDTKLRKITLASHQE
NRISELWAVTSSLIASGVRKMHPNIISNIFRSIVLPKVLYGMELTVTSKP
FLERLNRQCRSAFKNLLGYSKFGANDLNKLYQVADITPFIENRKVGLLAQ
LMKNCQTSKYLLHILACHDRQYSIIPSIMQICARESINIVELVLYYQKPF
RVSNPGDSMINEIGLDLVERLRTLIANWDAHECRVEMCEIIN Run BLAST on NCBI transcript from alignment at sc0000020:253665..254392 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002556 ID=TCONS_00002556|Name=TCONS_00002556|organism=Clytia hemisphaerica|type=transcript|length=728bp|location=Sequence derived from alignment at sc0000020:253665..254392 (Clytia hemisphaerica)
gtgttaaTGATTTCACACATTTCAACTCTGCATTCATGAGCATCCCAATT
AGCAATAAGGGTTCTCAATCTTTCAACCAAGTCTAGACCAATTTCATTAA
TCATTGAATCTCCAGGATTAGAAACTCTAAAGGGTTTCTGGTAGTAAAGC
ACTAGCTCAACAATATTAATACTTTCTCGTGCACAAATCTGCATTATACT
TGGGATAATCGAGTACTGTCGGTCATGACAAGCCAGAATGTGAAgaagat
attttgaagtttgacaATTTTTCATTAGCTGAGCGAGAAGGCCTACTTTT
CGATTCTCGATGAACGGTGTAATATCCGCCACTTGGTAGAGTTTGTTCAA
GTCGTTAGCGCCAAATTTGGAATAGCCAAGCAAGTTTTTAAAGGCTGATC
GGCACTGTCTGTTCAGGCGTTCAAGAAAGGGTTTGGAGGTTACTGTAAGC
TCCATTCCATACAAGACTTTTGGTAGCACGATAGATCTGAATATGTTCGA
GATGATATTTGGGTGCATCTTTCTTACTCCACTGGCTATTAAAGAGGAAG
TTACCGCCCACAATTCCGAAATACGATTTTCCTGATGACTGGCAAGCGTG
ATTTTCCTCAATTTTGTGTCCCAGTGGAATCCTAAGTGTTTGAGAGTTGA
TTGCGGTTTTACTTCTTTGTCGTTAATGATGACTGTAGGATTTTGGAATG
GACAATCTCCAGATATAACAAACTGTGT Coding sequence (CDS) from alignment at sc0000020:253665..254392 >TCONS_00002556 ID=TCONS_00002556|Name=TCONS_00002556|organism=Clytia hemisphaerica|type=CDS|length=726bp|location=Sequence derived from alignment at sc0000020:253665..254392 (Clytia hemisphaerica)
gttaaTGATTTCACACATTTCAACTCTGCATTCATGAGCATCCCAATTAG
CAATAAGGGTTCTCAATCTTTCAACCAAGTCTAGACCAATTTCATTAATC
ATTGAATCTCCAGGATTAGAAACTCTAAAGGGTTTCTGGTAGTAAAGCAC
TAGCTCAACAATATTAATACTTTCTCGTGCACAAATCTGCATTATACTTG
GGATAATCGAGTACTGTCGGTCATGACAAGCCAGAATGTGAAgaagatat
tttgaagtttgacaATTTTTCATTAGCTGAGCGAGAAGGCCTACTTTTCG
ATTCTCGATGAACGGTGTAATATCCGCCACTTGGTAGAGTTTGTTCAAGT
CGTTAGCGCCAAATTTGGAATAGCCAAGCAAGTTTTTAAAGGCTGATCGG
CACTGTCTGTTCAGGCGTTCAAGAAAGGGTTTGGAGGTTACTGTAAGCTC
CATTCCATACAAGACTTTTGGTAGCACGATAGATCTGAATATGTTCGAGA
TGATATTTGGGTGCATCTTTCTTACTCCACTGGCTATTAAAGAGGAAGTT
ACCGCCCACAATTCCGAAATACGATTTTCCTGATGACTGGCAAGCGTGAT
TTTCCTCAATTTTGTGTCCCAGTGGAATCCTAAGTGTTTGAGAGTTGATT
GCGGTTTTACTTCTTTGTCGTTAATGATGACTGTAGGATTTTGGAATGGA
CAATCTCCAGATATAACAAACTGTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002556-exon-sc0000020-1491911889:253665..254392 | TCONS_00002556-exon-sc0000020-1491911889:253665..254392 | Clytia hemisphaerica | exon |
| TCONS_00002556-exon-sc0000020-1510915933:253665..254392 | TCONS_00002556-exon-sc0000020-1510915933:253665..254392 | Clytia hemisphaerica | exon |
| TCONS_00002556-exon-sc0000020-1575043694:253665..254392 | TCONS_00002556-exon-sc0000020-1575043694:253665..254392 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020 | supercontig | sc0000020:253665..254392 . |
Blast
The following BLAST results are available for this feature:
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