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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002537 ID=TCONS_00002537|Name=TCONS_00002537|organism=Clytia hemisphaerica|type=transcript|length=1771bp
CAAAAAATGGGTACCCTAGAAATTATTTAACTTCCCCTTTAATAGGGAGA
ACAACGGTGATATGGAAATCGCGAACCGGCCAAACAGCCATCGTAGATTT
TGCGGGCAACGTGACAGACAGCTGTCTTTTCTTCGATTCATATCATCTCG
TTTAACGCTTCAAATGTTGAACCAGAATCAATgttaatcaacagaatcaa
ttagTCGAACCAGTTGAATGCATAAGCCAATCGAACGtagtcgaatcaat
cgaatcaatcgaatcaatcgaatacattagtcaatcgaacgcaatcgaat
caatcgagaaaatcgattggcattcgattgcgttcggcaatcgaatttca
attattcgattgtgttcaattgtgttcaattgatgcggcgttcgattcgt
ttgattgacatcgtctggtaatcgaactccatcgaagaATCAAAGTTTGA
GTGAAAAAATTAACCAAACTCCAAGTTTAAAAAGTTGTGAGTTTTCAATC
AATTTCACCTTCAATCAATGGGCTGTGGTTTGATCAGTTCGATAACGAGT
TTGTTGGAAGAGTTTGTGCCATTCTGTCGTTGTAGATTAGCCAGGTGGGT
GTTTAAgttaaaaacagcaattttttaacaatgaaATGTTGAGTCAGCAG
AAATGTGCTGTCCTTATAAGGGCAGTGTTTGAAAAATGTAACGTTATATC
GAAGGAAAGGTTTTTCAGatctttaaaagtgattttttaaatttttcatt
gctcaataacataccgtcaactgctccaacttgggactatcttacgcgac
atgggacggcaattccaccaccatttcaccaaacctccaaagtcatttga
tttgagtttaatgaaccgcgtattagaaaatacacgatttctctttcgca
ccgagtaggcttttaaatcgaaatatgaaaaatctgtagtggaacacgcg
CAAATGTGagtgtttgacgtcactcgcacgGAAAGTTACACACTCACTAT
TTGTTAATCTCATCAGGCagtaggcggttaggcggcgggcgttctcaATT
CTCCATTCGGTGTCcgatcattttgaatgaaaacaaatgttaaaaagggc
gcgctatcagtgaaagttatcaggacatgttatgacagaaagtatgattg
ataagcTTGgaggagttatcaaaacaaatttattgtcaaagagatttaac
agtaagtgaaaatacaggccagtaGCAATGTTCTTTGAAACGACTTAGTA
AATGTCGCATCGTCTGACCGACATAGCTCGCGTTACAGCGAGGACAACAA
ATTTGGTAAACTACAAAGCTTCTCATCTCTTTCTCAATAGTGGGCTTTAA
GGGCAATAAACATGATCTCAGTTTTCTCATTGTAAACACAATGTTACAGG
GCGCATTACATTTTCGTAGAGCATTCGAAAACTTTTCACTTATTTTGCCT
TGATACTCAATATAAACTTTCATCTTTTCAACCCGGTCGACTTTATCTTC
AGACTCCTTTTCCTCTGGATGATCTATTTTCCTGATTGTTTTTTTGAATC
AAAGGTTCAAAAAACGATTTTGGATACTGGTTCTTAATCAACAAAACTCG
CGCTCTCTGTAACtaagttaaaaagttttctctttTGTTACAAGAACAGT
AAATACGATGCAGTAAACCAATAGATCTAAGGCATAATATTTCATCATTA
GTCCAGTATTAGTTGGTTTACTGTACCAAGTTGACGTTAAGCAGCAATTT
GAACGGGTTATCTTCATGTCA Run BLAST on NCBI transcript from alignment at sc0000020:8217..9987 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002537 ID=TCONS_00002537|Name=TCONS_00002537|organism=Clytia hemisphaerica|type=transcript|length=1771bp|location=Sequence derived from alignment at sc0000020:8217..9987 (Clytia hemisphaerica)
TGACATGAAGATAACCCGTTCAAATTGCTGCTTAACGTCAACTTGGTACA
GTAAACCAACTAATACTGGACTAATGATGAAATATTATGCCTTAGATCTA
TTGGTTTACTGCATCGTATTTACTGTTCTTGTAACAaaagagaaaacttt
ttaacttaGTTACAGAGAGCGCGAGTTTTGTTGATTAAGAACCAGTATCC
AAAATCGTTTTTTGAACCTTTGATTCAAAAAAACAATCAGGAAAATAGAT
CATCCAGAGGAAAAGGAGTCTGAAGATAAAGTCGACCGGGTTGAAAAGAT
GAAAGTTTATATTGAGTATCAAGGCAAAATAAGTGAAAAGTTTTCGAATG
CTCTACGAAAATGTAATGCGCCCTGTAACATTGTGTTTACAATGAGAAAA
CTGAGATCATGTTTATTGCCCTTAAAGCCCACTATTGAGAAAGAGATGAG
AAGCTTTGTAGTTTACCAAATTTGTTGTCCTCGCTGTAACGCGAGCTATG
TCGGTCAGACGATGCGACATTTACTAAGTCGTTTCAAAGAACATTGCtac
tggcctgtattttcacttactgttaaatctctttgacaataaatttgttt
tgataactcctcCAAgcttatcaatcatactttctgtcataacatgtcct
gataactttcactgatagcgcgccctttttaacatttgttttcattcaaa
atgatcgGACACCGAATGGAGAATtgagaacgcccgccgcctaaccgcct
actGCCTGATGAGATTAACAAATAGTGAGTGTGTAACTTTCcgtgcgagt
gacgtcaaacactCACATTTGcgcgtgttccactacagatttttcatatt
tcgatttaaaagcctactcggtgcgaaagagaaatcgtgtattttctaat
acgcggttcattaaactcaaatcaaatgactttggaggtttggtgaaatg
gtggtggaattgccgtcccatgtcgcgtaagatagtcccaagttggagca
gttgacggtatgttattgagcaatgaaaaatttaaaaaatcacttttaaa
gatCTGAAAAACCTTTCCTTCGATATAACGTTACATTTTTCAAACACTGC
CCTTATAAGGACAGCACATTTCTGCTGACTCAACATttcattgttaaaaa
attgctgtttttaacTTAAACACCCACCTGGCTAATCTACAACGACAGAA
TGGCACAAACTCTTCCAACAAACTCGTTATCGAACTGATCAAACCACAGC
CCATTGATTGAAGGTGAAATTGATTGAAAACTCACAACTTTTTAAACTTG
GAGTTTGGTTAATTTTTTCACTCAAACTTTGATtcttcgatggagttcga
ttaccagacgatgtcaatcaaacgaatcgaacgccgcatcaattgaacac
aattgaacacaatcgaataattgaaattcgattgccgaacgcaatcgaat
gccaatcgattttctcgattgattcgattgcgttcgattgactaatgtat
tcgattgattcgattgattcgattgattcgactaCGTTCGATTGGCTTAT
GCATTCAACTGGTTCGActaattgattctgttgattaacATTGATTCTGG
TTCAACATTTGAAGCGTTAAACGAGATGATATGAATCGAAGAAAAGACAG
CTGTCTGTCACGTTGCCCGCAAAATCTACGATGGCTGTTTGGCCGGTTCG
CGATTTCCATATCACCGTTGTTCTCCCTATTAAAGGGGAAGTTAAATAAT
TTCTAGGGTACCCATTTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002537-exon-sc0000020-1491911889:8217..9987 | TCONS_00002537-exon-sc0000020-1491911889:8217..9987 | Clytia hemisphaerica | exon |
| TCONS_00002537-exon-sc0000020-1510915933:8217..9987 | TCONS_00002537-exon-sc0000020-1510915933:8217..9987 | Clytia hemisphaerica | exon |
| TCONS_00002537-exon-sc0000020-1575043694:8217..9987 | TCONS_00002537-exon-sc0000020-1575043694:8217..9987 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020 | supercontig | sc0000020:8217..9987 . |
Blast
The following BLAST results are available for this feature:
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