TCONS_00002526 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002526
Unique NameTCONS_00002526
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2630

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002526 ID=TCONS_00002526|Name=TCONS_00002526|organism=Clytia hemisphaerica|type=transcript|length=2630bp
CTTACGCTCTTTTTGTGTCTAACTCGAAAAAAGAAGGAGAGTCAAAGAGT
CTTACAGTcttagaacaaatttgtgtgaTGGCATTGAACACAAAATGGCT
TCCAAAGTGAAAGCACAAAGAACATGCACTTTGTGCAAGAATGATAATAG
AAATAAGAATGATTTCAACTGCATCTCACAGCCACTAAAGGAAGATTTGT
CTGCATTTTGCTGGATTTTACAGAAGAAAATGCCAAAAGACTTTGCTTCC
GACGACAGTTGCAGAATCTGCAACAAgtgcaaaaagaaaattgttagGAT
GACTTTGTTCAAACACCTGAGGTCAAAACAACTATGGAACCAAGCAATGA
ATatgTTAATGTGATTTCTCAAAGATCAGATGTAAGCAGAGGCTCTCGTA
TCGGAGAAAAAGATTCATCAGatcATGTCGACCCTGAATCTCAAGATTTC
CATGCTTCTGataaattatcaaaatcattttctattGAAAGAGCTAAAGt
taCTTCAACGCCATTGAAACACGCTGAGAAAATTCTACCCTCAGGCAAAT
CACGAGTTTTCTCAAACCCAGAAAATGGTTCAACACTTGTCATTGATAAT
GTGGATACAAAGGTTCGTGTAAGTGATATGACGGAAGAACACCAGAATAT
TGACATCCACCACACTGCAAAAATGGCTGTCATGCATCGTGTTAATTGCA
ACCACCTAAATGATACAAAACCTGCCACTGCACTGTCAGAACTAGACCAT
GAAGCATTCATCTGCAAAGCAAGTGATCATACAAAGCAACGACTGAACTA
TATGACACTGATATCGAGAATAATAACATCTTCAATTCCTGCGTTAGAGc
ccttttcaaaatttgtcgTTAACCATACTCCTCATCAATATGCTGAAGAA
ATGAGCAAAAAGTCCGAAAGTATATTTTTGGggttaatttatgaaaatga
aaacaccacTCAAGGTATCATGAAGTTCTTCAAGACTTGCAGCAATATCA
ACCGTCGTATGGCGAAGGAGAAGACAAAATAAACTATTCCCAGACAGTGG
CAGGAGATCAATTAACCATCGAAAGATGTGTGAATGCTGCCTTCCAGTGT
AGTAACGGGTTTGAACCTGATGAAAGATTTGATGGTTTTCAATTTGTGGT
TGCTGATTTTCACAGTGACATGAAACTAATGCAGCTTTGTTATGATCGAT
TTTACAAACAGTCATCGCAAGACGTTTGCACCCTCGGAGCAGACAAAGTA
TTAATTAATCGACGAAATCTGACGACTGAGGTCAAAAGACGTGTTTCAGC
TACAAAGAATTTTCTACACTTAGAACTGAGAACCAGAATAGTTGCAGCAA
CAATGAAATGCCTTGGCATCGACGACATTGATCCAATCCCAGATTCAATC
TCTCAAATTGAAACCACTGACAAAGTAGAACGAAAAAGATTCCTGGAGAA
CCTTTGTGCAGAGGTTGTTGACAAGTTTGTTCTCGTTTCCTCGAACACGG
AGAATTTCTTAACTGCTATTCAAGCCAAAAGTCAAAAGATTGATGGTAAA
TTTAAATGCAACTTTGAGAAATGTGACAGAATGTTTCTAGTTAATGGGAA
AGCTAAATTCAACCATGAAAAAACAGTACACGGTCTACACGAGGGTGAAA
ATattTCTGATGATCAAAAATTGAACTACCAAACATCCCTAATGGAGTAC
CTGATGTTATGGCACAATTTCAATGATTCAGTAAGCGAAGGTGATGGTGA
TCGACTTCTAAgatgttggaaatttgtgttacCCTATTTCTACAACGAGG
GCTCGCACAGCCAAAAATATTGTGTCGAGGCTGCTTACCTGATCATTCAA
GTCAACAGTCTCCTCTCGCAGAGACAAGCTCACTCACTGATCTGGAACCG
ATTCGTCAAGAACAAAGGTGGAAAAGGAGGGAACATCCCACTCGACCTTG
AAATGGAACATTATATCAGACTCGTGAAAAATATTCGACGTCGACTTGGA
CCAAATGCACTGGATTTGAAGATCATGGATAGATATGTCACAATTTTGAC
CTGATGGTTGGAATCGTGAAGAGATCAGGTAAGCACACACGAACAAACGA
TAAGGCGGATTTTAGAAAGCTTGTCAAAGAATTGGTTGGCAAtgacattt
tccaaagaaaGGCTGGAAGAACATATAATCATTTTGCGATGGACAAAAGC
CTTTTATCAGACTTTGACATTCATGGTTTTTTTGAATATATCGCGTTACG
TATtgataaaacgcttaaaacaaAAAGCTGTCGATAAAATTTAACTTGGA
GGATTTATTATTAACATTTTAAATACCTAGATAGATAGGGATTGGTTACA
TATTAATTTCTTGAGATTTATTTAGGATTATTTTCTGATACATcttatta
ttactattattattgttatttatatgttattttttttactgTAGGAAAAC
GAGTGTTACTTTtcatctgattttttttttgataaccttttcataaaact
ttataaacatttaagtaattttgattttttttatcatttttttatattat
ttttttattagaaaactaTTTTCATAAACCTTTATAaacattatatattt
ttaaacttGGAAACACAACTTGGAAAGGTC
Run BLAST on NCBI

protein sequence of TCONS_00002526-protein

>TCONS_00002526-protein ID=TCONS_00002526-protein|Name=TCONS_00002526-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MKLMQLCYDRFYKQSSQDVCTLGADKVLINRRNLTTEVKRRVSATKNFLH
LELRTRIVAATMKCLGIDDIDPIPDSISQIETTDKVERKRFLENLCAEVV
DKFVLVSSNTENFLTAIQAKSQKIDGKFKCNFEKCDRMFLVNGKAKFNHE
KTVHGLHEGENISDDQKLNYQTSLMEYLMLWHNFNDSVSEGDGDRLLRCW
KFVLPYFYNEGSHSQKYCVEAAYLIIQVNSLLSQRQAHSLIWNRFVKNKG
GKGGNIPLDLEMEHYIRLVKNIRRRLGPNALDLKIMDRYVTILT
Run BLAST on NCBI

transcript from alignment at sc0000020:860835..868402-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002526 ID=TCONS_00002526|Name=TCONS_00002526|organism=Clytia hemisphaerica|type=transcript|length=7568bp|location=Sequence derived from alignment at sc0000020:860835..868402- (Clytia hemisphaerica)
CTTACGCTCTTTTTGTGTCTAACTCGAAAAAAGAAGGAGAGTCAAAGAGT
CTTACAGTCTTAGAACAAATTTGTGTGATGGCATTGAACACAAAATGGCT
TCCAAAGTGAAAGCACAAAGAACATGCACTTTGTGCAAGAATGATAATAG
AAATAAGAATGATTTCAACTGCATCTCACAGCCACTAAAGGAAGATTTGT
CTGCATTTTGCTGGATTTTACAGAAGAAAATGCCAAAAGACTTTGCTTCC
GACGACAGTTGCAGAATCTGCAACAAGTGCAAAAAGAAAATTGTTAGGGT
AGGTAGTAGCATTCATTATAAAATTGAATTTTATTGTACTTTATTGAAGC
CTTGTTTGAAACATAATCCTAAACAAACGCGAGTTTAATTTGATGGAAAT
TCGATGCCTTTTACCTAAATTTTGTTTGGAATTATAAAACAATACTCAAA
TTTCTAAAAGTTTGTTTGTCATTTGTTTATTGACTTCTTCAAACGCCATT
GATTGATGTGCTTTTAACATGCAAGCAGCGAAATCATAGTGATTGCCAAG
AGCAGAATTGCATAAAAGCTGTTGCAAGTTAAGTCCGTATTGCAAGTTAA
GTCCGTATTGCAAGTTATGGCAGTTCAGGTTAATTCCTTTTATTCTTTTA
TTTTATATTTTACTTGCTTATTTTTTACAATACAGATGAAAAAGAACATG
ACCAAGCTCAAAGTTGAGATACAAGATTTCTTGTCAAAAATGGAACTATT
AACTGATACAGAAACTTTAGACAGCTCAAGAAACATCAGTAACATTAACA
GACTGACAAGTGACAGGCAGACATTTAATGCAGAGACAAGTGACACGAAG
ACATTTAACACAGGGACAAGTGACAGGCAGACATTTAACACAGAGACAAG
TGATAGGCAGACGTTTAACGCAGAGACAAGTGACAGGCAGACGTTTAACA
CAGAGACAAGTGACAGGCAGACGTTTAACACAGAGACAAGTGACAGACAG
ACAAGTGACACAAAAACAATTGACATGGACACTTTGGACAAAGTAAGTAC
AAGTAATCTCGAGACAAGTAACGAACAGACAATTGACATGGTTATAAATG
ACGATAGACTTTTGAATGACAAAGAAACAAGTGACACACATCAAAATGAC
ACACAGACAAATAATGGACAGACAACTGTTGAACCAGCAAGTGATGCCCA
AACAAGTAATGGTGGAAATGAGTCAGTTCTGGAGATGAAAAAATGTAAAA
CTCCGAAGGCATTCATACATGTTCATTGGCCTTCTGGTGAACGCAATCGT
GAGGTAATAGTCACCTTGGGTCAATAATGGGACAGGACAGTAAAAATCAT
TTGTGACAGCCTCATATATCATGTTATTGTTACATATATTAACGTTGAGA
CAAAAAGTCTTTTTTAAAGTTCTAATTTGATTTATTATCACATACTACAG
TATTTCAATTTTATTTCAATTTAATTCAATTCTAGATCAAATCCGACCTA
AACCCCTTAGCTGTCTGTCTTTTGAGAGGGACTTACAGTGACATTGCTAA
AAAGTGTTGGAAACACGAGGTCTTAAAGAAAGAGATTTTCAAACTGGTGC
AAAAAGATATCGACAATGAAACAGTGATGATTTGCAAGAAAAAGGTATTT
AACTGGGTGCATGTCACTAGTCCAACACTTTCTAGTCCAACAGTAAAATA
GTCCGAATCTATTTTAAAATAAATTTACAATTTAGAAGTCTTTTTTTCTG
ACGTCACTTTTGTCAGAAAACAAAAGATTTTAGAATGTTGAATAAGGGTT
TTTCATTGAGATAATATTAATAAAAGTTCATTATGGTGGCATTTTGACAT
AATTAGAAATAAAGGACCAATCAAATTTGCTTTATTTGGACCTGTTTGGA
CCATTAAAAAGATCACTTATAGCAAAAAGCTATTCTATAAAAACTTTATT
GCTAAGAAAAATAAATAAATCTCATTAAATTTGAAAGGTTGAGCTTCACT
GGTATTCTGAACTTTTTAAGAAAATTGTTGATGGGAAGAAAACTGTTTCA
CCGAGCATTCTCCAAAAAACTTCCAAGGAAGATATGATGAACTTTTCATT
GGATAAAGTGATGGCTGAATTAAAACAATTCTTTCCGATGCTGAGCTCCA
TTCTAATAACAGTTGCAAAGAAAACGAAAGCCAGCATTCAAGTTGACAAT
AGCAATCATTACAAAGTCATCAATACAATTTGCATGGCAGCCTCGATTCT
TCTTAAAAACCGTTTTGCCAAAATGACATCATTGCAGCTTTATGTCTCTC
TCATCATCAACCATTCATCATACACAGTTTGTATTATTTATTTTTGAAAA
TTATTCTGCTCTGTTCTATTAGTTTTTTGGCTCTGAAGAGAACGTTTGAA
AACTATAAAAACTATTTTACTTCTGCATTAATAGATTTCATATATGATCG
CAAACAATACCCTCTACAGGATAATCTTACAATTCTAATTCTCCAATTCT
ATTTTCTTATGTCTAGTCGTCAATGAAACGTTTGCAGGCACTTCGACTTG
TTGTTTCCACACAATTTCTAAACAAAGTCATGGATTTGTTTGGAAAAGAC
CACGACCAGCCTTTGAAGGATGCAAAGGCATATCTTGAAGATAGACTGAA
AACAGAAAATGAGCCAATTGCTGTACCGATTCCTGAATTTAACACTTCAA
TTGCCGGACAACTTCAGGACAAAGTGATTCCAAATACCAATGACAGTGAT
AGATGGAGGAAATACAATCCCATTGATGATATCACACCAACAATTTTTTT
GAACCATATATTTTTTATTTTGGATTTAATATGGTAGAAAATGAGTGCAG
TAAGGGGTTTCCTAATGGGACTTGCAATTTTTTAAACTATTCAATTTTTC
GTTCTTAAATAAACAACAGTCTAAAAAAACTCATTTTCGGATACCCTACT
GCTGAACTTCCTTGATTTAAGTTTAAAGTTTTTTTTAAATGCCAATTTTT
TCAGGTCCTAAAAGCAAAGTATTAGAAAGAGGACCAGAACCTATACCAGA
ACCATCAAACACAGCGATCTTTAGAGTAATGTTTAAAAATCGGGGAAACC
AAAAGTTTATTTTTGTATAAGTAAAGAACTGTTCTTTAAAACCGCCCCAA
TTTTTGAGTCGATAAAGCCCATATGTGTAAAATTTGAAAACTAATTTTTT
TTTTTTGATAAAAACTATTCAGAATCGGGAATTTCTTGAAAAGTTTGATT
TTAGATCCCTCAAAATCCCGCTTCATCCCGCTTTAGATCCCTCAAAATCG
GAATCGAATTAATTCCCGATTGGGAAGGGCTAGAGTTCTCAAATTTTCAC
TGGATATTCGTTTTTATCTTCCTTATCGGATGAAAGAAAGATCCTGTCGT
TAAATATCGTCCATTCTCTTTACGACCAAAAATGGTCATCTTTTTAATCC
GATAAATCCGATTACAGATCGCCGTGAAAGGGTAATTTGAGATATGTATT
CAGTATTGATCGTACCTAATAACTATATTTTAGTATCTATTTGATAATGA
CAGTTTACTAACTTTGATTCCCATAGATGACTTTGTTCAAACACCTGAGG
TCAAAACAACTATGGAACCAAGCAATGAATGTGAGTTTATTCAATATCTT
TCATGTAGATCTATGTAACCTGCACAATAGAAAAATATATACTTTGTTAA
CACTTTGCCAAATTGCCAAATTGAATATCTCATTTTTTTTAATTTTCAGA
TGTTAATGTGATTTCTCAAAGATCAGATGTAAGCAGAGGCTCTCGTATCG
GAGAAAAAGATTCATCAGGTATACCTTATCACTGTTCTAATCACAGCCCC
ATTTTTGGTATAAGATTTACATCAAAAAAAAAATTCTGAAAATTACAAAG
TAGTCATGGCAGCTTTTTTTATTGTGTCATAAATTAAACAACCATGTTTT
GTGAACATTTTAGTCTGAAAAATTTGGTCAATTAAAAAAAGCACATAAGT
TTATCTGCAATTTACAAAATAAAGGTAAAATCAAATTTTTCAGATCATGT
CGACCCTGAATCTCAAGATTTCCATGCTTCTGATAAATTATCAAAATCAT
TTTCTATTGAAAGAGCTAAAGGTAATTATTATCAGCTTGTCCACAACTCT
CACTCCATCTATTTTGTAGTTTTATTTGCTTTAATTGTGGTTGCTTATTG
ATTGATATCTGATTTTGTTTCTTCATATTTTTTTCATTTAGTTACTTCAA
CGCCATTGAAACACGCTGAGAAAATTCTACCCTCAGGCAAATCACGAGTT
TTCTCAAACCCAGGTGGGAATTTTCTTAATTCTCGATTTTGTCATTCAAT
TGAAACACCTTCATTAAAATACGTTCAGGTTCGAGTCCTGCTAAGAGCGA
TTCTATTTGATATTTTATTGGAAAGAGTGCCATGCTCTTAGTCCATCCAT
ATTTTAATGAGGAGTTTCTGAATGACTCTTGTCATTTGAATTCATGTAAA
ATAAAATAAAATAAAATATGCATTATATTCTTTTCAGAAAATGGTTCAAC
ACTTGTCATTGATAATGTGGATACAAAGGTTCGTGTAAGTGATATGACGG
AAGAACACCAGAATATTGACATCCACCACACTGCAAAAATGGCTGTCATG
CATCGTGTTAATTGCAACCACCTAAATGATACAAAACCTGCCACTGCACT
GTCAGAACTAGACCATGAAGCATTCATCTGCAAAGCAAGTGATCATACAA
AGCAACGACTGAACTATATGACACTGATATCGAGAATAATAACATCTTCA
ATTCCTGCGTTAGAGCCCTTTTCAAAATTTGTCGTTAACCATACTCCTCA
TCAATATGCTGAAGAAATGAGCAAAAAGTCCGAAAGTGTATGTACCGTCA
TATCCTTTATATTAGAATTTTCTATGCATGTTTCGAAACCAAACCATCCT
CTCAAAAACATAGCTCTTCACTTATAGTATAGAAAAGTTTCATGTAATAT
GATTTTTTTAAAGAAAATGTTTTAAGAAAATAGCCTTAGAGTATGCTATT
GAGCTATTGAACACTTTATGACTTGTCTTCTACTTTTTTTGGCTGTATAC
ACTTTTATTGATTATTGTTTATTAGATATTTTTGGGGTTAATTTATGAAA
ATGAAAACACCACTCAAGGTATCATGAAGTTCTTCAAGACTTGCAGCAAT
ATCAACCGTCGTATGGCGAAGGAGAAGACAAAATAAACTATTCCCAGACA
GTGGCAGGAGATCAATTAACCATCGAAAGATGTGTGAATGCTGCCTTCCA
GTGTAGTAACGGGTTTGAACCTGATGAAAGATTTGATGGTTTTCAATTTG
TGGTTGCTGATTTTCACAGTGACATGAAACTAATGCAGGTTTAATATTTG
TAAATTGGATTTTAATTCAATCCCAAAAATTTAGGATTTGAAATTTTTTT
TTTAATTGCATGGGATCAAAAATGGGGTGTCTATGATGTAATATTTTTTG
GGTGATTTCCAACAAAAAACCCTGAAAGTATCATTTAAATGTTTTGTAAT
CAACACATGTTTTTTTAAGCTTTGTTATGATCGATTTTACAAACAGTCAT
CGCAAGACGTTTGCACCCTCGGAGCAGACAAAGTATTAATTAATCGACGA
AATCTGACGACTGAGGTCAAAAGACGTGTTTCAGCTACAAAGAATTTTCT
ACACTTAGAACTGAGAACCAGAATAGTTGCAGCAACAATGAAATGCCTTG
GCATCGACGACATTGATCCAATCCCAGATTCAATCTCTCAAATTGAAACC
ACTGACAAAGTAGAACGAAAAAGGTACTGGTTTCTCACTATTTTTACTTG
CTTCTTACTGCTCAAGCTATTGAGTTTCAGTTTTTGAAATGATGAAACAA
TAAAGGGGCATATATTTCAACAATTGTGAATGAGGTCTTTCGCATAGTAC
ATTTATTGTTTTAGATTCCTGGAGAACCTTTGTGCAGAGGTTGTTGACAA
GTTTGTTCTCGTTTCCTCGAACACGGAGAATTTCTTAACTGCTATTCAAG
CCAAAAGTCAAAAGATTGATGGTAAATTTAAATGCAACTTTGAGAAATGT
GACAGAATGTTTCTAGTTAATGGGAAAGCTAAATTCAACCATGAAAAAAC
AGTACACGGTCTACACGAGGGTGAAAATGTAAGTACTTACTCCTTTAGGA
AATATGATTTTATTCTCAATTGACTTCAGACAAAATAGGATAGAAATATT
TAGAACACTGGCTAAAGCAAAGTTCTTTGTTTCAGACAAAGAACAATAAT
TTACACAACTTTTTATTTAGCCTGTGTTTTTCAAAATGTTATTGAACTAT
ACTGAATTTCGAGATGGAAAAGTGTGTTGAAAGTATTTCTTACACCTTTT
TGTCCATTTAAAAATAATTTCAGATTTCTGATGATCAAAAATTGAACTAC
CAAACATCCCTAATGGAGTACCTGATGTTATGGCACAATTTCAATGATTC
AGTAAGCGAAGGTGATGGTGATCGACTTCTAAGATGTTGGAAATTTGTGT
TACCCTATTTCTACAACGAGGGCTCGCACAGCCAAAAATATTGTGTCGAG
GCTGCTTACCTGATCATTCAAGTCAACAGTCTCCTCTCGCAGAGACAAGC
TCACTCACTGATCTGGAACCGATTCGTCAAGAACAAAGGTGGAAAAGGTA
TTTAAAAACCAAAACTATCTTGCACTGTTTTCTGCAGCAAAAAAAAAACT
TTCACACCAATAGATTATTCAATACTTTCTTTCTTGGTTGGTTCTTTTCC
TATGTTGATATATGAGGTATTTGCATCCTACATACTACGTGCTTTATTTT
TATTTCTATTTCAGGAGGGAACATCCCACTCGACCTTGAAATGGAACATT
ATATCAGACTCGTGAAAAATATTCGACGTCGACTTGGACCAAATGCACTG
GATTTGAAGATCATGGATAGATATGTCACAATTTTGACCTGATGGTTGGA
ATCGTGAAGAGATCAGGTAAGCACACACGAACAAACGATAAGGCGGATTT
TAGAAAGCTTGTCAAAGAATTGGTTGGCAATGACATTTTCCAAAGAAAGG
CTGGAAGAACATATAATCATTTTGCGATGGACAAAAGCCTTTTATCAGAC
TTTGACATTCATGGTTTTTTTGAATATATCGCGTTACGTATTGATAAAAC
GCTTAAAACAAAAAGCTGTCGATAAAATTTAACTTGGAGGATTTATTATT
AACATTTTAAATACCTAGATAGATAGGGATTGGTTACATATTAATTTCTT
GAGATTTATTTAGGATTATTTTCTGATACATCTTATTATTACTATTATTA
TTGTTATTTATATGTTATTTTTTTTACTGTAGGAAAACGAGTGTTACTTT
TCATCTGATTTTTTTTTTGATAACCTTTTCATAAAACTTTATAAACATTT
AAGTAATTTTGATTTTTTTTATCATTTTTTTATATTATTTTTTTATTAGA
AAACTATTTTCATAAACCTTTATAAACATTATATATTTTTAAACTTGGAA
ACACAACTTGGAAAGGTC

Coding sequence (CDS) from alignment at sc0000020:860835..868402-

>TCONS_00002526 ID=TCONS_00002526|Name=TCONS_00002526|organism=Clytia hemisphaerica|type=CDS|length=4425bp|location=Sequence derived from alignment at sc0000020:860835..868402- (Clytia hemisphaerica)
GAGGGAACATCCCACTCGACCTTGAAATGGAACATTATATCAGACTCGTG
AAAAATATTCGACGTCGACTTGGACCAAATGCACTGGATTTGAAGATCAT
GGATAGATATGTCACAATTTTGACCTGAATTTCTGATGATCAAAAATTGA
ACTACCAAACATCCCTAATGGAGTACCTGATGTTATGGCACAATTTCAAT
GATTCAGTAAGCGAAGGTGATGGTGATCGACTTCTAAGATGTTGGAAATT
TGTGTTACCCTATTTCTACAACGAGGGCTCGCACAGCCAAAAATATTGTG
TCGAGGCTGCTTACCTGATCATTCAAGTCAACAGTCTCCTCTCGCAGAGA
CAAGCTCACTCACTGATCTGGAACCGATTCGTCAAGAACAAAGGTGGAAA
AGATTCCTGGAGAACCTTTGTGCAGAGGTTGTTGACAAGTTTGTTCTCGT
TTCCTCGAACACGGAGAATTTCTTAACTGCTATTCAAGCCAAAAGTCAAA
AGATTGATGGTAAATTTAAATGCAACTTTGAGAAATGTGACAGAATGTTT
CTAGTTAATGGGAAAGCTAAATTCAACCATGAAAAAACAGTACACGGTCT
ACACGAGGGTGAAAATCTTTGTTATGATCGATTTTACAAACAGTCATCGC
AAGACGTTTGCACCCTCGGAGCAGACAAAGTATTAATTAATCGACGAAAT
CTGACGACTGAGGTCAAAAGACGTGTTTCAGCTACAAAGAATTTTCTACA
CTTAGAACTGAGAACCAGAATAGTTGCAGCAACAATGAAATGCCTTGGCA
TCGACGACATTGATCCAATCCCAGATTCAATCTCTCAAATTGAAACCACT
GACAAAGTAGAACGAAAAAGATGAAACTAATGCAGGAGGGAACATCCCAC
TCGACCTTGAAATGGAACATTATATCAGACTCGTGAAAAATATTCGACGT
CGACTTGGACCAAATGCACTGGATTTGAAGATCATGGATAGATATGTCAC
AATTTTGACCTGAATTTCTGATGATCAAAAATTGAACTACCAAACATCCC
TAATGGAGTACCTGATGTTATGGCACAATTTCAATGATTCAGTAAGCGAA
GGTGATGGTGATCGACTTCTAAGATGTTGGAAATTTGTGTTACCCTATTT
CTACAACGAGGGCTCGCACAGCCAAAAATATTGTGTCGAGGCTGCTTACC
TGATCATTCAAGTCAACAGTCTCCTCTCGCAGAGACAAGCTCACTCACTG
ATCTGGAACCGATTCGTCAAGAACAAAGGTGGAAAAGATTCCTGGAGAAC
CTTTGTGCAGAGGTTGTTGACAAGTTTGTTCTCGTTTCCTCGAACACGGA
GAATTTCTTAACTGCTATTCAAGCCAAAAGTCAAAAGATTGATGGTAAAT
TTAAATGCAACTTTGAGAAATGTGACAGAATGTTTCTAGTTAATGGGAAA
GCTAAATTCAACCATGAAAAAACAGTACACGGTCTACACGAGGGTGAAAA
TCTTTGTTATGATCGATTTTACAAACAGTCATCGCAAGACGTTTGCACCC
TCGGAGCAGACAAAGTATTAATTAATCGACGAAATCTGACGACTGAGGTC
AAAAGACGTGTTTCAGCTACAAAGAATTTTCTACACTTAGAACTGAGAAC
CAGAATAGTTGCAGCAACAATGAAATGCCTTGGCATCGACGACATTGATC
CAATCCCAGATTCAATCTCTCAAATTGAAACCACTGACAAAGTAGAACGA
AAAAGATGAAACTAATGCAGGAGGGAACATCCCACTCGACCTTGAAATGG
AACATTATATCAGACTCGTGAAAAATATTCGACGTCGACTTGGACCAAAT
GCACTGGATTTGAAGATCATGGATAGATATGTCACAATTTTGACCTGAAT
TTCTGATGATCAAAAATTGAACTACCAAACATCCCTAATGGAGTACCTGA
TGTTATGGCACAATTTCAATGATTCAGTAAGCGAAGGTGATGGTGATCGA
CTTCTAAGATGTTGGAAATTTGTGTTACCCTATTTCTACAACGAGGGCTC
GCACAGCCAAAAATATTGTGTCGAGGCTGCTTACCTGATCATTCAAGTCA
ACAGTCTCCTCTCGCAGAGACAAGCTCACTCACTGATCTGGAACCGATTC
GTCAAGAACAAAGGTGGAAAAGATTCCTGGAGAACCTTTGTGCAGAGGTT
GTTGACAAGTTTGTTCTCGTTTCCTCGAACACGGAGAATTTCTTAACTGC
TATTCAAGCCAAAAGTCAAAAGATTGATGGTAAATTTAAATGCAACTTTG
AGAAATGTGACAGAATGTTTCTAGTTAATGGGAAAGCTAAATTCAACCAT
GAAAAAACAGTACACGGTCTACACGAGGGTGAAAATCTTTGTTATGATCG
ATTTTACAAACAGTCATCGCAAGACGTTTGCACCCTCGGAGCAGACAAAG
TATTAATTAATCGACGAAATCTGACGACTGAGGTCAAAAGACGTGTTTCA
GCTACAAAGAATTTTCTACACTTAGAACTGAGAACCAGAATAGTTGCAGC
AACAATGAAATGCCTTGGCATCGACGACATTGATCCAATCCCAGATTCAA
TCTCTCAAATTGAAACCACTGACAAAGTAGAACGAAAAAGATGAAACTAA
TGCAGGAGGGAACATCCCACTCGACCTTGAAATGGAACATTATATCAGAC
TCGTGAAAAATATTCGACGTCGACTTGGACCAAATGCACTGGATTTGAAG
ATCATGGATAGATATGTCACAATTTTGACCTGAATTTCTGATGATCAAAA
ATTGAACTACCAAACATCCCTAATGGAGTACCTGATGTTATGGCACAATT
TCAATGATTCAGTAAGCGAAGGTGATGGTGATCGACTTCTAAGATGTTGG
AAATTTGTGTTACCCTATTTCTACAACGAGGGCTCGCACAGCCAAAAATA
TTGTGTCGAGGCTGCTTACCTGATCATTCAAGTCAACAGTCTCCTCTCGC
AGAGACAAGCTCACTCACTGATCTGGAACCGATTCGTCAAGAACAAAGGT
GGAAAAGATTCCTGGAGAACCTTTGTGCAGAGGTTGTTGACAAGTTTGTT
CTCGTTTCCTCGAACACGGAGAATTTCTTAACTGCTATTCAAGCCAAAAG
TCAAAAGATTGATGGTAAATTTAAATGCAACTTTGAGAAATGTGACAGAA
TGTTTCTAGTTAATGGGAAAGCTAAATTCAACCATGAAAAAACAGTACAC
GGTCTACACGAGGGTGAAAATCTTTGTTATGATCGATTTTACAAACAGTC
ATCGCAAGACGTTTGCACCCTCGGAGCAGACAAAGTATTAATTAATCGAC
GAAATCTGACGACTGAGGTCAAAAGACGTGTTTCAGCTACAAAGAATTTT
CTACACTTAGAACTGAGAACCAGAATAGTTGCAGCAACAATGAAATGCCT
TGGCATCGACGACATTGATCCAATCCCAGATTCAATCTCTCAAATTGAAA
CCACTGACAAAGTAGAACGAAAAAGATGAAACTAATGCAGGAGGGAACAT
CCCACTCGACCTTGAAATGGAACATTATATCAGACTCGTGAAAAATATTC
GACGTCGACTTGGACCAAATGCACTGGATTTGAAGATCATGGATAGATAT
GTCACAATTTTGACCTGAATTTCTGATGATCAAAAATTGAACTACCAAAC
ATCCCTAATGGAGTACCTGATGTTATGGCACAATTTCAATGATTCAGTAA
GCGAAGGTGATGGTGATCGACTTCTAAGATGTTGGAAATTTGTGTTACCC
TATTTCTACAACGAGGGCTCGCACAGCCAAAAATATTGTGTCGAGGCTGC
TTACCTGATCATTCAAGTCAACAGTCTCCTCTCGCAGAGACAAGCTCACT
CACTGATCTGGAACCGATTCGTCAAGAACAAAGGTGGAAAAGATTCCTGG
AGAACCTTTGTGCAGAGGTTGTTGACAAGTTTGTTCTCGTTTCCTCGAAC
ACGGAGAATTTCTTAACTGCTATTCAAGCCAAAAGTCAAAAGATTGATGG
TAAATTTAAATGCAACTTTGAGAAATGTGACAGAATGTTTCTAGTTAATG
GGAAAGCTAAATTCAACCATGAAAAAACAGTACACGGTCTACACGAGGGT
GAAAATCTTTGTTATGATCGATTTTACAAACAGTCATCGCAAGACGTTTG
CACCCTCGGAGCAGACAAAGTATTAATTAATCGACGAAATCTGACGACTG
AGGTCAAAAGACGTGTTTCAGCTACAAAGAATTTTCTACACTTAGAACTG
AGAACCAGAATAGTTGCAGCAACAATGAAATGCCTTGGCATCGACGACAT
TGATCCAATCCCAGATTCAATCTCTCAAATTGAAACCACTGACAAAGTAG
AACGAAAAAGATGAAACTAATGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001352XLOC_001352Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002526-exon-sc0000020-1575043694:868105..868402TCONS_00002526-exon-sc0000020-1575043694:868105..868402Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:864773..864826TCONS_00002526-exon-sc0000020-1575043694:864773..864826Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:864585..864653TCONS_00002526-exon-sc0000020-1575043694:864585..864653Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:864282..864359TCONS_00002526-exon-sc0000020-1575043694:864282..864359Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:864090..864161TCONS_00002526-exon-sc0000020-1575043694:864090..864161Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:863516..863865TCONS_00002526-exon-sc0000020-1575043694:863516..863865Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:863015..863277TCONS_00002526-exon-sc0000020-1575043694:863015..863277Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:862580..862833TCONS_00002526-exon-sc0000020-1575043694:862580..862833Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:862225..862438TCONS_00002526-exon-sc0000020-1575043694:862225..862438Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:861706..861979TCONS_00002526-exon-sc0000020-1575043694:861706..861979Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1575043694:860835..861538TCONS_00002526-exon-sc0000020-1575043694:860835..861538Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:868105..868402TCONS_00002526-exon-sc0000020-1510915933:868105..868402Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:864773..864826TCONS_00002526-exon-sc0000020-1510915933:864773..864826Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:864585..864653TCONS_00002526-exon-sc0000020-1510915933:864585..864653Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:864282..864359TCONS_00002526-exon-sc0000020-1510915933:864282..864359Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:864090..864161TCONS_00002526-exon-sc0000020-1510915933:864090..864161Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:863516..863865TCONS_00002526-exon-sc0000020-1510915933:863516..863865Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:863015..863277TCONS_00002526-exon-sc0000020-1510915933:863015..863277Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:862580..862833TCONS_00002526-exon-sc0000020-1510915933:862580..862833Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:862225..862438TCONS_00002526-exon-sc0000020-1510915933:862225..862438Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:861706..861979TCONS_00002526-exon-sc0000020-1510915933:861706..861979Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1510915933:860835..861538TCONS_00002526-exon-sc0000020-1510915933:860835..861538Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:868105..868402TCONS_00002526-exon-sc0000020-1491911889:868105..868402Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:864773..864826TCONS_00002526-exon-sc0000020-1491911889:864773..864826Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:864585..864653TCONS_00002526-exon-sc0000020-1491911889:864585..864653Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:864282..864359TCONS_00002526-exon-sc0000020-1491911889:864282..864359Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:864090..864161TCONS_00002526-exon-sc0000020-1491911889:864090..864161Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:863516..863865TCONS_00002526-exon-sc0000020-1491911889:863516..863865Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:863015..863277TCONS_00002526-exon-sc0000020-1491911889:863015..863277Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:862580..862833TCONS_00002526-exon-sc0000020-1491911889:862580..862833Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:862225..862438TCONS_00002526-exon-sc0000020-1491911889:862225..862438Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:861706..861979TCONS_00002526-exon-sc0000020-1491911889:861706..861979Clytia hemisphaericaexon
TCONS_00002526-exon-sc0000020-1491911889:860835..861538TCONS_00002526-exon-sc0000020-1491911889:860835..861538Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002526-proteinTCONS_00002526-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:860835..868402 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.44715	1.40752	0.423596	0.312367	3.66858	2.68946	2.8006	2.97331	3.08189	2.54174	2.4969	4.64298	3.78672	4.32069	8.79734	9.04656	6.72543	10.1927	6.33344	5.60357	8.85538	7.88964	4.1616	5.19592	0.188802	0.112334	4.94498	3.48265	3.50046	2.88581
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002526 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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