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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002518 ID=TCONS_00002518|Name=TCONS_00002518|organism=Clytia hemisphaerica|type=transcript|length=1593bp
atttttgtcaatattttgtgatttttgaagaaaaaagattcTCTTCGTCG
AAAtagtaataaaagtttttgggtcGGCAAATCTAGAGAAGAGTAGGTCG
GCTgctgacggcaaaccaacattgTTTAAGTCCAGCCTAACGGTGCACTA
TCGATAACCAGGTCAGAATACTACACTCTCTCAAATATATAcatttcatc
attttcatcaaaacggTTTCGGCAATCGACCCAATGTGCGTTTCCCATAA
TACAAACAAGataaaaccaaataaaaaccAATCTCAATCACTGATATAAA
AGATGCacccaaaacgaggctaatCAAACCTCCAATTTTCCCTGCAACAT
GATCCAGAGTATGTAATTGTTTTTCTTCAATCATCTGATAAGAGTCGATA
CTGGAATATTGGATATCTAACCGGTATCGATTCTGACCACCAGGGCTGTT
CGGTGGATTATCGTAGGACAGTAAACGGGTCATATACTCTGTTTCTTCAC
ACGGGAATGGACAATTCACACCAGACTGGACTTGTGCGCTTTCTTGTTGA
ACACATTGTAGTACTTCCAGTATGGTACGATTCTGTCGGTAAAGCCGTAC
GTAGTCTTCGGGAATGTATTTTTTAAAGTAATCGAAAATATCACCGCATT
TTTTAAACGTGCGTAAGTACGTAGATGATTCGAGGCATGTTCTACGTGTG
TATTTCCCAGGGAAAATATCGTTGAATTTCTCAGAGGTGCACTTTGAAGG
GAACGGCGGCGGTAGACGTTTTATGATGGTTTTCCTGATATTAAATTCGA
AGGATTTCGACGTCTCCAAAACGAAGCGATTTGTTAAATCGAATTCAACG
CCTATTTGCGGATCGTGAACGATTGCGACGATGAACGGAGTACGTTTCAA
TGCCGTTGTATTGATCTGGAATTCGATATGCGCATGTGCGTACGCATCTG
ATAAATCACCGTTATGATTCAAAGTCACGCACGAGTGATCAAACTGGGCA
AGAGATTTTAAATAGACATCATTAGTACATGTTTTGCCACCCCATGTATA
ACAAGCAAGGACGTGAAAAATACCGTTACTCCATTGTCCAGTTATGTTTA
AAATGTTCGATCGAGGTTTTGGAGGACGTATTTCTTCCATACACGGCTGC
CGATAGTTGTCATATCTTTGACCTTGTTTTTTGTTGCAGTATGAGAAATA
TTGTTGAATCATGGATCGTAAATCACATACTGTAATACTTGGGAATGGAT
TTTCGACTTGGAGTGATGTTGTCACTTCAGCGTATATATGATATTCCAAA
TAGTTGGTTACTATGGAGTAGGTCAGCCATGTTGAAGCTAAAATGGCGCA
TATGACGATGATGCTCCAAAGGCAAGATTCAATCCGTGACTCGGAGGAGA
TACGAGCCAACCCATGAACGGTAGAGGAATCAAGATATTCTCTGCGTTTG
TTATTGATTAGTTTTCGTGAGAATCGGAGAGATTTTCGAGGTGTATCGGG
TGGGTTGTTGTTTTGGTTGTCATGGTTACCACCATCTTTGCTGTGCTCTT
TACCAAAGTATCCTGTTAgatgaaggaaaaaaaacatcatGAA Run BLAST on NCBI transcript from alignment at sc0000020:695965..698471- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002518 ID=TCONS_00002518|Name=TCONS_00002518|organism=Clytia hemisphaerica|type=transcript|length=2507bp|location=Sequence derived from alignment at sc0000020:695965..698471- (Clytia hemisphaerica)
ATTTTTGTCAATATTTTGTGATTTTTGAAGAAAAAAGATTCTCTTCGTCG
AAATAGTAATAAAAGTTTTTGGGTCGGCAAATCTAGAGAAGAGTAGGTCG
GCTGCTGACGGCAAACCAACATTGTTTAAGTCCAGCCTAACGGTGCACTA
TCGATAACCAGGTCAGAATACTACACTCTCTCAAATATATACATTTCATC
ATTTTCATCAAAACGGTTTCGGCAATCGACCCAATGTGCGTTTCCCATAA
TACAAACAAGATAAAACCAAATAAAAACCAATCTCAATCACTGATATAAA
AGATGCACCCAAAACGAGGCTAATCAAACCTCCAATTTTCCCTGCAACAT
GATCCAGAGTATGTAATTGTTTTTCTTCAATCATCTGATAAGAGTCGATA
CTGGAATATTGGATATCTAACCGGTATCGATTCTGACCACCAGGGCTGTT
CGGTGGATTATCGTAGGACAGTAAACGGGTCATATACTCTGTTTCTTCAC
ACGGGAATGGACAATTCACACCAGACTGGACTTGTGCGCTTTCTTGTTGA
ACACATTGTAGTACTTCCAGTATGGTACGATTCTGTCGGTAAAGCCGTAC
GTAGTCTTCGGGAATGTATTTTTTAAAGTAATCGAAAATATCACCGCATT
TTTTAAACGTGCGTAAGTACGTAGATGATTCGAGGCATGTTCTACGTGTG
TATTTCCCAGGGAAAATATCGTTGAATTTCTCAGAGGTGCACTTTGAAGG
GAACGGCGGCGGTAGACGTTTTATGATGGTTTTCCTGATATTAAATTCGA
AGGATTTCGACGTCTCCAAAACGAAGCGATTTGTTAAATCGAATTCAACG
CCTATTTGCGGATCGTGAACGATTGCGACGATGAACGGAGTACGTTTCAA
TGCCGTTGTATTGATCTGGAATTCGATATGCGCATGTGCGTACGCATCTG
ATAAATCACCGTTATGATTCAAAGTCACGCACGAGTGATCAAACTGGGCA
AGAGATTTTAAATAGACATCATTAGTACATGTTTTGCCACCCCATGTATA
ACAAGCAAGGACGTGAAAAATACCGTTACTCCATTGTCCAGTTATGTTTA
AAATGTTCGATCGAGGTTTTGGAGGACGTATTTCTTCCATACACGGCTGC
CGATAGTTGTCATATCTTTGACCTTGTTTTTTGTTGCAGTATGAGAAATA
TTGTTGAATCATGGATCGTAAATCACATACCGTGATACTTGGGAATGGAT
TTTCAACTTGTAGTGATGTTGTCACTTCAGCGTATATGTGATATTCCAAA
TAGTTGGTTACTATGGAATAAGTCAGCCATGTTGAAGCTAAAATGGCACA
TATGACAATGATGGTCCAAAGGCAAGATTCAATCCGTGACTCGGAGGAGA
TACGAGCCAACCCATGAACGGTGGAGGAATCAAGATATTCTCTGCGTTTG
TTATTGATTAGTTTTCGTGAGAATCGGAGAGATTTTCGAGGTGTATCGGG
TGGGTTCTNCGTACGTAGTCTTCGGGAATGTATTTTTTAAAGTAATCGAA
AATATCACCGCATTTTTTAAACGTGCGTAAATACGTAGATGATTCGAGGC
ATGTTCTACGTGTGTATTTCCCAGGGAAAATATCGTTGAATTTCTCAGAG
GTGCACTTTGAAGGGAACGGCGGCGGTAGACGTTTTATGATGGTTTTCCT
GATATTAAATTCGAAGGATTTCGACGTCTCCAAAACGAAGCGATTTGTTA
AATCGAATTCAACGCCTATTTGCGGATCGTGAACGATTGCGACGATGAAC
GGAGTACGTTTCAATGCCGTTGTATTGATCTGGAATTCGATATGCGCATG
TGCGTACGCATCTGATAAATCACCGTTATGATTCAAAGTCACGCACGAGT
GATCAAACTGGGCAAGAGATTTTAAATAGACATCATTAGTGCATGTTTTG
CCACCCCATGTATAACAAGCAAGGACGTGAAAAATACCGTTACTCCATTG
TCCAGTTATGTTTAAAACGTTCGATCGAGGTTTTGGAGGACGTATTTCTT
CCATACACGGTTGCCGATAGTTGTCATATCTTTGGCCTTGTTTTTTGTTG
CAGTATGAGAAATATTGTTGAATCATGGATCGTAAGTCACATACTGTAAT
ACTTGGGAATGGATTTTCGACTTGGAGTGATGTTGTCACTTCAGCGTATA
TATGATATTCCAAATAGTTGGTTACTATGGAGTAGGTCAGCCATGTTGAA
GCTAAAATGGCGCATATGACGATGATGCTCCAAAGGCAAGATTCAATCCG
TGACTCGGAGGAGATACGAGCCAACCCATGAACGGTAGAGGAATCAAGAT
ATTCTCTGCGTTTGTTATTGATTAGTTTTCGTGAGAATCGGAGAGATTTT
CGAGGTGTATCGGGTGGGTTGTTGTTTTGGTTGTCATGGTTACCACCATC
TTTGCTGTGCTCTTTACCAAAGTATCCTGTTAGATGAAGGAAAAAAAACA
TCATGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002518-exon-sc0000020-1575043694:697246..698471 | TCONS_00002518-exon-sc0000020-1575043694:697246..698471 | Clytia hemisphaerica | exon |
| TCONS_00002518-exon-sc0000020-1575043694:695965..696331 | TCONS_00002518-exon-sc0000020-1575043694:695965..696331 | Clytia hemisphaerica | exon |
| TCONS_00002518-exon-sc0000020-1510915933:697246..698471 | TCONS_00002518-exon-sc0000020-1510915933:697246..698471 | Clytia hemisphaerica | exon |
| TCONS_00002518-exon-sc0000020-1510915933:695965..696331 | TCONS_00002518-exon-sc0000020-1510915933:695965..696331 | Clytia hemisphaerica | exon |
| TCONS_00002518-exon-sc0000020-1491911889:697246..698471 | TCONS_00002518-exon-sc0000020-1491911889:697246..698471 | Clytia hemisphaerica | exon |
| TCONS_00002518-exon-sc0000020-1491911889:695965..696331 | TCONS_00002518-exon-sc0000020-1491911889:695965..696331 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020 | supercontig | sc0000020:695965..698471 - |
Blast
The following BLAST results are available for this feature:
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