TCONS_00002493 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002493
Unique NameTCONS_00002493
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length583

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002493 ID=TCONS_00002493|Name=TCONS_00002493|organism=Clytia hemisphaerica|type=transcript|length=583bp
GATGGGTATGTCAGTAGAAAATAAGACATGGACCATCAAcgatttcatcg
aatatttacCGTTTTACAACGCTTTCAccatcaaaattttgtgtttgaTA
AATGTTCCAACCTTTGTGGCTGGTTTCATCTTATACGTCAATGTTTTGAT
CGCTCCTGAATTACAATGCGAGTGGAAGTTAACAACCTTTGAAATATCTC
TCATATCTATTGCTTTTTATATTGGAGAAGGTTGCGGATCGTTTTACTGG
GGTCGAACGGCTGATATTTATGGTCGTAAAGTGATACTCATTGTAGTCAC
AGCATGTATGATCTATTTTGCTTTGCTGTCATCTGTTAGCGATTCATTTG
CCTCACACATGATGATGCGATTCTTCGTAGGAGCTGGTTATAACGGTTGT
TTTATAATGACCGCAGTTTATTCCACTGAATTCACCAAGAAAGCTGATCA
TTGTAAAGCTATACTGTTCCTAAGATGCCCAACACTTCCAAATCACTTGA
AGTCAATTGAAGAATCTGGTGAGTTTTAACATATCCTTTCTTCGTGAAAT
TTTCTGCATATTTTGCCAACCCGATGTTGACCA
Run BLAST on NCBI

protein sequence of TCONS_00002493-protein

>TCONS_00002493-protein ID=TCONS_00002493-protein|Name=TCONS_00002493-protein|organism=Clytia hemisphaerica|type=polypeptide|length=175bp
MGMSVENKTWTINDFIEYLPFYNAFTIKILCLINVPTFVAGFILYVNVLI
APELQCEWKLTTFEISLISIAFYIGEGCGSFYWGRTADIYGRKVILIVVT
ACMIYFALLSSVSDSFASHMMMRFFVGAGYNGCFIMTAVYSTEFTKKADH
CKAILFLRCPTLPNHLKSIEESGEF
Run BLAST on NCBI

transcript from alignment at sc0000020:238737..250662-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002493 ID=TCONS_00002493|Name=TCONS_00002493|organism=Clytia hemisphaerica|type=transcript|length=11926bp|location=Sequence derived from alignment at sc0000020:238737..250662- (Clytia hemisphaerica)
GATGGGTATGTCAGTAGAAAATAAGACATGGACCATCAACGATTTCATCG
AATATTTACCGTTTTACAACGCTTTCACCATCAAAATTTTGTGTTTGATA
AATGTTCCAACCTTTGTGGCTGGTTTCATCTTATACGTCAATGTTTTGAT
CGCTCCTGAATTACAATGCGAGTGGAAGTTAACAACCTTTGAAATATCTC
TCATATCTATTGCTTTTTATATTGGAGAAGGTTGCGGATCGTTTTACTGG
GGTCGAACGGCTGATATTTATGGTCGTAAAGTGATACTCATTGTAGTCAC
AGCATGTATGATCTATTTTGCTTTGCTGTCATCTGTTAGCGATTCATTTG
CCTCACACATGATGATGCGATTCTTCGTAGGAGCTGGTTATAACGGTTGT
TTTATAATGACCGCAGTTTATTCCACTGAATTCACCAAGAAAGCTGATCA
TTGTAAAGCTATACTGTTCGTGAGTATTGTTTTTATTGTTGGTAATCTTG
CAGCTATCGGAGTATCCTATTTTACAATGAATTCTTACGGATGGGGAAAC
TTTATTCTTTGGTCAATGCTACCGTGTCTTTTGCTAGTGTTTTTAATGGT
GCTACTACCCGAGTCCATTCGATTCTTGACTGTGAATGGAGAAAACAATC
AAGTGTTGGAAATGTTAAATGACATTGCAGCTACTAACAACATTTCATGG
CCTGAGAATATCCAATTTCAAGAAATATCGAAAAGTAAGAATATAATCAA
CAATCAAAGCCCTGGCTACGTTGAAGTCATGACAAAACATTGGAAGAAAC
TGTTGGGCTTATCAATGTATGGGATTCCCTTATTTTTAAGTTACTACGGT
ATTCCCTTCTTTATTGATTACAAACTTCAACAGCAGAGCTCTTGTCAATT
CAATAGAACACAGACAATTGTTCAATGTGCTCCTTTGAGTGATTCTCAAA
TTGTACGTTCCTTTCTAGTCAACCTTGGAATGTTACCAGGAACTATTTGT
GGTTATATTTTAGCTGAAAAATTCGGTCGAAAAATTTTGCTTGGGTTTAC
AATGATACTAATGAGTATTTGTTATTTCATTCAATTGTTTTGTGTACNAC
TTAGGTTTACAATGACACTAATGAGTATTTGTTATTTCATTCAATTGTTT
TGTGTACCTTCGATTATAACATACATATTATTGTTTTTGGCGTCTGGGTT
TGGGATGAGTTCAACTGTTTTCATTATGCTTTTCTCATCTGAATTGTTTC
CAACAAATATCAGAAGTACTGCATCTGGCATGGCAGCAACCCTATGGAAA
ATCTTCTCTATTATTTCACCACTTTTGTTCCAGCATTTGATTTATACAAA
CTGGACTCTTGTTATTGTTTTGATGGGGATGTCGAGTCTGATTGGTATTG
TTGGATTGTGCATCCTTCCTGAAACACTTGGTCAAAATTTAAAGGATTAC
TAAATTCATTTTATTAGACAATGACGGCATGAGACTTTTTGGGTTATTTT
TAATTAACTTGTTGAATGAAAATAAGTAGACATGCAGTTATTAACACAAA
CTTAAATATTTTGTGTTAGAGGCCACTCACAAATCGATGTTTCCCATAGT
TCTAAGTATTAGACTTAGCGTCATTTTGACGTTAGTCGTGGGAAGAATCG
ATATGTGAGTGCCCCCTTAATTAAAATCTCTAATGAAAACTAGCCGTGAA
AAGCAAACAAACAAATCGTGTTAATTTACGTGTTATCAAGGCCATTAATT
AGACGCCTAATTATTTTCGTACACTAAGGTATCGGTTGTAGGAAATTTGC
GTTATCCAGTGCTAAATTCGTATACACAAAGTTTTACTTTGGTTAAACTA
AAATAAATTTCTAACCATTATCTTGTTAGAAATGCAAAATATTTATCAAA
AGTTTTCTTTGTAAGACTATCAGCTTCTATTGGAATAGAAATATTTTTAG
AGTTTTCTTTTCGTTTACACTTATGAATTTTTCAGATCGTGATCCAAGGG
CCCCTAAAATGTTTTAGTACACTAATACACAATTTAAAATCGTAACATTT
GCATAACTTGAAGATAGTGTGGCTAGAGCAAAGATTTTTTTTAAATTAAT
TGTCAAAATATATTTCTCTGAAAATGACTGGAAATGTTTGATTTATATTT
ATAGATAAAAAGTGGAAAACTCAAACTAAAAAATAAAATGAAATTTAACT
TTCCATTTGCCTATGACCTAGATTAGGGGTAGAAACCAATTAAGTAGTCA
GACAGCTGAGAAGTAAGTGTGAGTCGGTAGATATAAGTTTGGCATGACAT
TATGGCTAATCCTCGAATAATAAGTTTTGGGGAAAATTTGTCCCAACCGA
AGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCTGTGTTAAGTCCAAGTTTAACTT
TCCATTTGCCTATGACCTAGATTAGGGGTAGAAACCAATTAAGTAGTCAG
ACAGCTGAGAAGTAAGTGTGAGTCGGTAGATATAAGTTTGGCATGACATT
ATGGCTAACCCTCGAATAATAAGTTTTGGGGAAAATTTGTCCCAACCGAA
GGTGCCCCCAAAACGTATGGTTGCAGACATATTTACATAATAACATAAAA
CTCCTAAAAGATAAATAAGAAGACAATGACAAATAATTTTTTTTTTTTTA
TAATATAGACGTGAATCAAGAAGACATTCTTTCATCATAATTCATGACTG
TTTAACTAGGCCCGTGTCCCTCCCTCTTCAGGGAAAACGATTGATGTAAA
CTTGCCTTTTGCCATGAAACTAATACCCTTTAACATGGAGGAGGCTTGGA
TACCTGCAAGGGGAAACACCCATCATGGAGGTCCCAGACACTGTGAGAAA
GATGTCACGTATAGCGCCCTAACCCCAGTGTCCCCGCCCAACCACGGACC
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCAATGACGGGCCAGCCCAGCCTACCCACAGTCCCGGCCACGGAGGAGGT
CAAGGACACACCCCGCAATGACGGGCCCTTTATTGAAAGGGAAAACGGAA
TAATTTGGATCCCCAAAGCTGCATAATGCTATCAATTCTAGCCATTGGTA
ACTTCGTAAAACGTGTTATTGGTAGTGCCTCCTAGGAACAATATAGTAAC
AAAAAGAACATAACAGTATAATAGAAAATAAAATATTATTTTATAAACTA
TTTAGATATCATACCTAAATATATCGAAAACGATATGAAATACTTAATAT
GCATTTTAACTTGCCTCTGGTCTGCAACATGAGCCGCCCATAACTTTACA
GCCTTGTTAACAGGCTATGTAAACCATCTAATCAATGCCGATTGTTTCTT
ATGTACTGATCACAATCCTTCTTTATGCCTCTATATCTAAAACCGGATCA
TTCTCAACTCGCCGCTCACTGTAACTGGGATACATAGCCTTCTCCAAATC
AACCTTTGTCAGTCGACTGACAGAGAACTTCCGTATATAGTTGTGTAATA
CAATATCTAAATTAATATAAATGCTGTAGAAGCCGATTCTAATTTGACGT
GCACTGTCTGTGTACAACCTTGCCTAGGTTGACACCAGCCTTCAAGCCAA
GAAGATCACTGTACTGTAAAAATTTTTCAATTAACCGGGTCGCAGATTTT
TGGTAACGTGAAATAAAATTAAATATTCAGGTTTCTGTGTTTGATTATTA
CATCCAGTTGAGGATAAGTTTATGCTTATAAAAAGTTGAAAAATAAACTA
TCTGAAGTAAAAAAGTAAAAGAATTTTGTTCTCTATACCCCGCCATATTG
GACAAAATCATTGGTGTTAAAATATAATGTTCATTTTACAAACTATATGT
TACAGATCTATAATATATGTTCCAGATCTGTAATATATTTGTCACCTTTA
TCATATAGGTTAGATGCGCGAAATTACGAACTTTGTGACAGAGAAAACAC
GCGCGTTAAAAGACAGGTGAACAGGTGAAGCATGTTCTCAAAAATGGTGG
TGGTGGCTGCCTCTTTTCCTGCTGGTGGTTCTAAAAGCATGTGTCCACCT
GACACTGCAGGAAGCAGAGCCAAAAGAACCTTATATACTTGCATGGTTAA
AGAAAGATGGTGGCTATCAATTAGTTTTGTCTCTTTGAAAAATGTATTAA
TTGAGTGGGGTGCAAACTCCCTGGCGGTTTTGGTGGTTTGTTCAAATGTT
TGGGCTGGCCAGCAGGTTGTTCTCCCTCTTGCTCAGTTGCTCTGCTTACC
AATCTTATTTTTAATAGTCATTTGCTAACCATGGAACGATTACTGTACTT
GATCCATTCGATTAAGGTTCCATTGAGCAGTTCCTTGATACGTATGAAAG
CGTAAAAGTTGACAAAAAAAAACAAGCAAAAAGAGCTATGAACCGCGTAT
ATACGTACTATGTGAACGGCCCCGCTCCTTGTCTTGATTAAATCAAGTTT
TTTTTTTTTTTAATTGTCTTATTGCTGGCAATAAGGTCGTTCCAACATAT
ACTTGTCTCGTTTCAATCAAATGTTCGGGCCTGATTTCTGTAAACTTTGG
ACTCATTTTAAATGCTCAGGGTTATCTCTTGCTGAATTCCATTTTTTATG
CCTCCTTGGCTCACTTCCTTTCAAACCTGAAATTCAACCTTCCTCCTCTG
GTGCTCTGAACCCTAAAATTCTCGAGATTGCTCGCAATCTTAGTCTTATC
TCTGATCATTGCTCAAATAATTGTCTTGACCTTGACAATGTGATGACTGC
CGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
CACCTGAATATTGCTTCCTTAGCTCTACATTTTGATGACTTAACTACTCT
TCTTTCTAAACTTAACTTCAATTTTGACGTAATGGCTATTACCGAGACCA
GCCATAAAAAGAAATGCATAATTACTGTATCATTCATATTGTAATAATTA
TGCATGGTTTTATCATTGTTTTTCTGCTGGACTACATAATTATTCAACAG
GACGTCCTCTTTGAAAAAAGGTCTATTTTACCGAACTTCCAAGGTCATCT
TCTTATACTGTACATAAGAAACATAGAAATATATTTGTTGTTAAGGAGAA
ATTGACAATAGAGAGAAAAAGCTGAACAGAAAGTAGCAAGTCCCATGTTA
TATCAAGTTGTCCCATGTTAGAGCAGTTGACGGTACTCAGGATAAGGCAA
GGCTGAATGTAACACAAATTGACAGTCCATTCCATCAGGAATTAGAATGT
CAAATAAAATTGGAAAGGGCAAGATTATCAGCAGTCTGATAATTTAGTTA
GTGTATAAGCTTTGCATCCTTTCCAGATTGGATGCCTGGCCAGAATCAAC
TTGTGACTTACTTACCATAATGAATTTGGTGATTTGACAGTATACTTTCG
TCTAACAATTGCAACAGTTCTTCTCAAGGCCCTACTGACAGGGTCTACAA
CATTGATTGCATCTCTGATACGATAGCGCTGTACCAGCAAGCCACGAGAT
TTACAGGCACCAATGACATATGATTCACCGGCATCAGGAAGTATTGTTAG
TACGTCTCTTACAACATCTTCAAGTTGTTCCTGTGTAATGTCAGAGTAGT
GGTTTCTAGGTCCGATCTTTCCACTAGTGCCCATCCCTAGTTCTATTCTT
CTACGGGAAAGTGTTTTGGTGGAAACTCCTAATTCTTTAGCAACAGTTTC
CCAACAGTTGAAGATTTCAAACAGCCGACCAATTTCTTCCTGTGATATAT
CTTTTCTTGGGCGACCTGGTAAACCAGTAGCAGGTTCATTTACACACAGT
CTTTCATGGATAGCTATTGACTGAGCAGCTTCAATATTTTCATTGAAAGT
GGCAAGAGTGCTTTGAATATCTTCAATAATCAAAGATAAATAATGCACTA
TGTTTTTTCCTTCACCGTCACATACCTCCTGAAGCTGAGGATGATCTAAA
CATCTTTGTAAAGCTACATTTAGTACATTCAAGTAGTCTTCAAGTCTCCT
TGCCCAGTATTCCATGAGATTTTCATTATAGGTGAATAGGTTACGTTTAG
CTTGTCTGATGTTTCCAGGTAGTGAATCCAAAAAGTCTTCAAAATTTAAC
TCGGTAGCCATTTTCTTGTGTTTTTCACTTGTTCACTTCACTTCACGTTG
TTTTTGTTATGTTATTCCGATTTTTTCCCCGAAACGGGGAAACGGAGCAG
TGTATCTCGCGCATCTGCGCGAATGCAGAACGCGCATGGAAAATAATGCG
CATACAAAATATTACGGCTTTGGATTATATATTATAGCAAGCATGTTATT
GAAGATATATAATGAGTATTTCGACTTTATATATTATGCTTGTATACTAT
ATATTAGCTATAGCATGTTATAATTTAATTTTACACTATATATAACCGAC
TCTCAAGAATATATTTTATCATTCTAATTTTGTCCAGTTTGGCGGGGCAT
AGTATATTCTCTTCTTTATCGTGTTTTATAAGCGTAAGCGCTGTCCAAGA
CAAAGAATTCACAATTCACTGCAAATATCAAATCTTATAAAGAGAGCAGC
TGTGCCTTAGAAGAGTAACCTAGATTAAGTGAATGGGCCTTTTGTTTGAG
CTAAGAAATTTTAAAAGCAAGAAAGAGAGAATTTTGAAATAATTGATCTT
AGGGACATGTTACGTTTCGTAGAGAAAAATTTGTGTTTTTATGGTGTTTT
TACTTTTTGTTTTGATTTCATCTTCAACAGGCCAAAATGATAATAAAAAA
TTTTCCTGTTTTTGCAAGCCCCTTGCGCAACACCGAAAACCTAATTCCAA
AAGAAAAATTGTTAAACCAAATTCAATCCAATACGCAAACAATCAAAATC
TTGTAGAGTTCATGACAATCATATTGCAAGTTTTTTGTCCTTCTTCTTCC
ACCTCGCTCCAAGCAACCGAGCCTTATGATAACCAAAGACAATGCAATAA
GCTATTACAGCCTCAATGACCCCAAACGACCAGCGACAATCACCTTGGCC
AACATCCCCAAACCACCGACAATCACTTTGGCCAGCATCAGTAGCGGCCT
GGCTTAATTTTCTTGGTGGTGCAAATTATGAAATTGGCGCCCCTGGTATT
TTTGTCCTTGATTGCGCCCTCGACCATTGAGTGAAAATATTAAACTGTAA
GAGCAGTGACTGGTTGAAAGTAACGCCCGGAATCTCTGAGTTAACAAACT
CTTATTTATACGAAGGTGGTGGTAATGATAACTCGATATCTATTTCCTTG
TTATTTCCTGGTCCTACTTTTTGGTGTAAGAAAGGTCAAACAGCTTAAAA
GATATTCTAAAAAGGAGAAAGTTAGTCCGCATACTGTAAGACCACAAAAA
CCACAGCGAGCAGTTTCGATCAATCTCCCATTTTGGGGGTGAGCATCCTC
TTTAACCCCTGGTGGGGGGCCCCCCTGGTGGATACACAACACTTCTCTTG
CTTTGACTTTTCGCAATTCATTGTTGATAGTAGTTTTGAAAAAATTCGTA
GAATAAAACGAAGCGCCGCAGGCGAAAAAAAAATTACATTGCACTTATGG
AAAGCGCTAAAAACGTGTCAAAGGGCGCCAAATCGCCCAACCAAACATCA
AAATAAATTTGGCGCCCCCTTGAAAAGCTTTTTTGGCGCCCCTCTCAGGT
CTTTCTGGGTGGTGCACTGCACACCCTGCACCCCCTGCCAGGCCGCCACT
GGCCAGCATCCCCAAAACCACCGACAATCACCTTGGTCAACATCCCCAAA
ACCACCGACAATCACCTTGGCCAACATCCCCAAAACCAGCGACAATCACC
TTGGCCAACATCCCCAAAAAACCAGCCACGATCACCCAAGCCAGATATTA
GTTGCAGATTTTGCTATGCTCTTGATAAAATCTTAATGGTTCGTTTCATA
AAGTTTTTCAAAGAATCTGGTCGTTCGTATGCAACAAAAATTGTACGCTT
CATTGCACAAACTACTTTTGTATCTATGAATGTCCATCCTCAAAATCTCT
TTGCGTTCGGTAAAAGTGATGGTTATGAATTAACCCCTTTATCTCTATAT
TGGAAGATTCAATAAAAATATTTCATCCTGTCAGCTTTCAGTTAGAGCGT
CGTCTTGAACAGGGAGTTGCGATAGCCATTATGAACATGACGTCACGTGG
TTATTAGCAAAGTAGACTCAGTTGGCAGAGGGCGGCCACCCAGCCATTCC
AATACAGTGGCGCTTATCAAATAAAAGTTAAACCACGATTTAACCTGTAT
TAAATCCAAATTATTCAAGTTCAGCACAATTCTCTTAAAATTCTAAAAGT
TTAGCAAATTTGAGCCGCATCAGTATTCTTAGAAAAAAGATTTGTATTCG
GATATCACTTAATAGAATAGAAATGTTTTCTCTAAGATACTAGTGCTTTG
AGGACTAAGACCATGGTAAATTATCACTAAAGCAAAATTAAAAAAAAATT
ATTGTCAAATGACACGTATTGGCTCTGAAGATTATGACTCTGTAAGAGAA
TCTGCCCAGGTTGGCGCACTGCCTTCATCTTTTTCATTCACATCTAGGAT
CAATGTAGAATGAGCGTTTTAGCGCGCTGATTGGCTGAAGCAAAAAAATC
GCACGAAAAAAGCATCAATCACAAAAATAAATATTAGAACGCAGTCATTT
TAGATCTCATTTTTAAACAAAAAGTCACGGGGTTTTAATTAACCAGGTCA
GATTGTAACAATTGACATATCTATAGAGAGCATAGTGTGTTATGCGCAGA
ATGGAAGATCTATTATAAGATTACAAGTAACCATTTTCATCACCACTAAA
TTTAAATGCTTATATGTTTTCACCATGGTCAGAGCCCTGAACAGTAATAT
ATTGAATACTTCAAATTAACGATACCATAATATGCTGGAAGTAGACCTTT
TCATAAATAACCTCACGAACATCTTTCGCCTCGAATTCAAACAATTACCA
TGGTGATTGAGTCTCTTGAGACATTTAATGATTTTTTTATGATTAGGGAG
TAGTTCTAATAAAATCCGCTGGGAGTTAATCACCATTGCAATATTTTCAA
AACAAGGCAACTGACGTTCGTAACGTGATTGATGAAAATATTTATTGTTA
AGATTATAATTAAAATAGATTTAGTTACAACTAAATAAATCTACAGAATT
GCGGGCGACCATTCCATCACGAGTATTTTCTAATTTTGAAGATGTCTAAA
TAAACTGGTCCCATATAACGGCACAAGTTAGGGCAGGATATTTCGTGCTG
TCAATGTTTTCGTACTTTAATACCTTAAGGAAACTAATTTTCGTGTTTCT
GGGTGTATATCGCAAAAATTAGTTCGCAAAATGTAATTTTTACTGAAAAC
CCTCAAAAACCCCTAGAAATATGAAAAAATGTGGGCAAAAAGTGGTCGTT
AACCACGTAAATTGGTTCTGCAAAATGCACCAATTTAGTACTCTCTCGCA
CCACGAAAATGAATTCCGCGAAATTATTTCCCACTTAGATTAGTTCCCTT
ATGTCTTATTTTTTCAAAAAGTTCATTTTGCACCAAGTTTCATTACACTT
CATAATGACTTTTGTTTACACTAGAACAGTCGATAGTATTTCCATATGGA
TGAGTTATGTCATGATTACGTTGGGTTCCTTTCATCTATGGAGAAACAAG
CATAAGATTTGATCTTGCTTGAGAAATTAAATACAGCAGCCACTCCAAAT
TTCCTAAATAAAAGTGTTAGTTGTCTAGAGAAATGGATCTTTGACACGAT
TTTTCGGAAAAGGGGTCAGTAGAAAGTCCATTCGCTTTGAGTGTGCACTC
TATTTTTCTATCATGTACAATCAGTGTCATAATATATTGGCACTTTTTCG
AAAATTGAAGTTCAAGCGAGAATGTCAATTTTTAGGCCTTCAACTTGATT
TCATCGAGTATTTCAATCTGGGAGGGATTTATTGGTTTCTAGGCTATATT
TCAAGCACTACTGGACCATTTTTGAACTTTTGTTTCCTCAGATCCTATAG
TCTTAAGTCTTAAGTCTCATGTTAAAACTCAGAGTTAAAACTCTACCCTT
CCAACCTACTTTAGAGCACTTACAAATCGATTGTGGTTTCAAAACACCCC
GATAAATTTCCCTTCTGTGCCAAGTATTTTGTCCCTGATTGTAGAAACCA
TGTCAGTTTAATGAAACAAATTCTTTTGAGTGTGGTTTCCATGTGGTAGC
TAAAAGCACTTAAAGCAATTTGTCTTTTGCATTCCTATATAGGATGAATA
AGAGAAATGTGAAACATTTTCGATGATCGCTCTCTCTTGTTCGATGTTGT
TTTAGAGGTGAAAAGGTAAAAGGTCCTAAAAACCCTTTTATAAGGAAATA
ATTGTTTACCTTCTCTTTGGTATCTTCTATAGCTCTGATGATTTCATTTT
TATGTCCCATAGCTAAGATGCCCAACACTTCCAAATCACTTGAAGTCAAT
TGAAGAATCTGGTGAGTTTTAACATATCCTTTCTTCGTGAAATTTTCTGC
ATATTTTGCCAACCCGATGTTGACCA

Coding sequence (CDS) from alignment at sc0000020:238737..250662-

>TCONS_00002493 ID=TCONS_00002493|Name=TCONS_00002493|organism=Clytia hemisphaerica|type=CDS|length=1056bp|location=Sequence derived from alignment at sc0000020:238737..250662- (Clytia hemisphaerica)
CTAAGATGCCCAACACTTCCAAATCACTTGAAGTCAATTGAAGAATCTGG
TGAGTTTTAAATGGGTATGTCAGTAGAAAATAAGACATGGACCATCAACG
ATTTCATCGAATATTTACCGTTTTACAACGCTTTCACCATCAAAATTTTG
TGTTTGATAAATGTTCCAACCTTTGTGGCTGGTTTCATCTTATACGTCAA
TGTTTTGATCGCTCCTGAATTACAATGCGAGTGGAAGTTAACAACCTTTG
AAATATCTCTCATATCTATTGCTTTTTATATTGGAGAAGGTTGCGGATCG
TTTTACTGGGGTCGAACGGCTGATATTTATGGTCGTAAAGTGATACTCAT
TGTAGTCACAGCATGTATGATCTATTTTGCTTTGCTGTCATCTGTTAGCG
ATTCATTTGCCTCACACATGATGATGCGATTCTTCGTAGGAGCTGGTTAT
AACGGTTGTTTTATAATGACCGCAGTTTATTCCACTGAATTCACCAAGAA
AGCTGATCATTGTAAAGCTATACTGTTCCTAAGATGCCCAACACTTCCAA
ATCACTTGAAGTCAATTGAAGAATCTGGTGAGTTTTAAATGGGTATGTCA
GTAGAAAATAAGACATGGACCATCAACGATTTCATCGAATATTTACCGTT
TTACAACGCTTTCACCATCAAAATTTTGTGTTTGATAAATGTTCCAACCT
TTGTGGCTGGTTTCATCTTATACGTCAATGTTTTGATCGCTCCTGAATTA
CAATGCGAGTGGAAGTTAACAACCTTTGAAATATCTCTCATATCTATTGC
TTTTTATATTGGAGAAGGTTGCGGATCGTTTTACTGGGGTCGAACGGCTG
ATATTTATGGTCGTAAAGTGATACTCATTGTAGTCACAGCATGTATGATC
TATTTTGCTTTGCTGTCATCTGTTAGCGATTCATTTGCCTCACACATGAT
GATGCGATTCTTCGTAGGAGCTGGTTATAACGGTTGTTTTATAATGACCG
CAGTTTATTCCACTGAATTCACCAAGAAAGCTGATCATTGTAAAGCTATA
CTGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001334XLOC_001334Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002493-proteinTCONS_00002493-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002493-exon-sc0000020-1575043694:250194..250662TCONS_00002493-exon-sc0000020-1575043694:250194..250662Clytia hemisphaericaexon
TCONS_00002493-exon-sc0000020-1575043694:238737..238850TCONS_00002493-exon-sc0000020-1575043694:238737..238850Clytia hemisphaericaexon
TCONS_00002493-exon-sc0000020-1510915933:250194..250662TCONS_00002493-exon-sc0000020-1510915933:250194..250662Clytia hemisphaericaexon
TCONS_00002493-exon-sc0000020-1510915933:238737..238850TCONS_00002493-exon-sc0000020-1510915933:238737..238850Clytia hemisphaericaexon
TCONS_00002493-exon-sc0000020-1491911889:250194..250662TCONS_00002493-exon-sc0000020-1491911889:250194..250662Clytia hemisphaericaexon
TCONS_00002493-exon-sc0000020-1491911889:238737..238850TCONS_00002493-exon-sc0000020-1491911889:238737..238850Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:238737..250662 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.104799	0	0	0	0	0	0	0.159874	0.0990148	0.0961062	0	0.126177	0	0.215459	0.11561	0.622725	0.675391	0.100839	0	0.45263	0.975352	0	0.0707618	0.770969	0.224782	0.780434	0.41645	0.42115	0.107271
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002493 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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