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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002487 ID=TCONS_00002487|Name=TCONS_00002487|organism=Clytia hemisphaerica|type=transcript|length=691bp
CAAAGGGTACGAATTTGTATCTCTAGGTTATCAAAAGTAGCGAAACTCCA
TAGACACGATTAGGCAAGAATCATAGACGCGATTAAAAATACCTCTAAAG
GTACTTTTTGTCGACTTTTCCCCGAGGCTTCAAAGGTAGCATAACTCCAA
CCCATGATAACATCTATGGAACAACCTTAGGCTAAAGGATAGCTTTTATT
AAAAGTGAAATTAATTGAGCTTTAAAGGGTTTCAAGCGGAAATACGTTCC
CTAACACAGAGCATAAAATGTTCAATTAAAGACCTTTCATCATGACCTGT
CTTGCGTGCTCGTTCATGCCAAGCTAGACTCCTCAAGGTCTTGCCTTTCA
ATCTTAAGTTTTTTCAAACGACATCCCAAGGTCTTTCTACTGAGTGAATG
AGAATCTTGACACTCTACTTTATACCGCCGAATGAATAAATTTTATTATA
CTTTATTGTTTATGAGATACCTAAGAGGTACATAATGATCCCTTTAGCGT
TGAGGGGATCTTCAGAATTCTTTCGAAGGCTTTTTTCCTGCCCCTATGGT
TACTATATTATACCTTGTTAACTTTCGAATTTTTGGAAATCCCGAAAATC
ACTCAAAAGGTACAAAATAATTCCTACGGGGTGTTTTAAAATTACCTTAA
CGGTGTTTTTTAAAATCGTACCACAGAAGGTATCATTTTAA Run BLAST on NCBI transcript from alignment at sc0000020:49508..50236- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002487 ID=TCONS_00002487|Name=TCONS_00002487|organism=Clytia hemisphaerica|type=transcript|length=729bp|location=Sequence derived from alignment at sc0000020:49508..50236- (Clytia hemisphaerica)
CAAAGGGTACGAATTTGTATCTCTAGGTTATCAAAAGTAGCGAAACTCCA
TAGACACGATTAGGCAAGAATCATAGACGCGATTAAAAATACCTCTAAAG
GTACTTTTTGTCGACTTTTCCCCGAGGCTTCAAAGGTAGCATAACTCCAA
CCCATGATAACATCTATGGAACAACCTTAGGCTAAAGGATAGCTTTTATT
AAAAGTGAAATTAATTGAGCTTTAAAGGGTTTCAAGCGGAAATACGGTTA
GAATAATAACTTTCAGAGTCTTGGATTATAACAGTTCCCTAACACAGAGC
ATAAAATGTTCAATTAAAGACCTTTCATCATGACCTGTCTTGCGTGCTCG
TTCATGCCAAGCTAGACTCCTCAAGGTCTTGCCTTTCAATCTTAAGTTTT
TTCAAACGACATCCCAAGGTCTTTCTACTGAGTGAATGAGAATCTTGACA
CTCTACTTTATACCGCCGAATGAATAAATTTTATTATACTTTATTGTTTA
TGAGATACCTAAGAGGTACATAATGATCCCTTTAGCGTTGAGGGGATCTT
CAGAATTCTTTCGAAGGCTTTTTTCCTGCCCCTATGGTTACTATATTATA
CCTTGTTAACTTTCGAATTTTTGGAAATCCCGAAAATCACTCAAAAGGTA
CAAAATAATTCCTACGGGGTGTTTTAAAATTACCTTAACGGTGTTTTTTA
AAATCGTACCACAGAAGGTATCATTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002487-exon-sc0000020-1575043694:49991..50236 | TCONS_00002487-exon-sc0000020-1575043694:49991..50236 | Clytia hemisphaerica | exon |
| TCONS_00002487-exon-sc0000020-1575043694:49508..49952 | TCONS_00002487-exon-sc0000020-1575043694:49508..49952 | Clytia hemisphaerica | exon |
| TCONS_00002487-exon-sc0000020-1510915933:49991..50236 | TCONS_00002487-exon-sc0000020-1510915933:49991..50236 | Clytia hemisphaerica | exon |
| TCONS_00002487-exon-sc0000020-1510915933:49508..49952 | TCONS_00002487-exon-sc0000020-1510915933:49508..49952 | Clytia hemisphaerica | exon |
| TCONS_00002487-exon-sc0000020-1491911889:49991..50236 | TCONS_00002487-exon-sc0000020-1491911889:49991..50236 | Clytia hemisphaerica | exon |
| TCONS_00002487-exon-sc0000020-1491911889:49508..49952 | TCONS_00002487-exon-sc0000020-1491911889:49508..49952 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020 | supercontig | sc0000020:49508..50236 - |
Blast
The following BLAST results are available for this feature:
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