TCONS_00002471 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002471
Unique NameTCONS_00002471
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1571

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002471 ID=TCONS_00002471|Name=TCONS_00002471|organism=Clytia hemisphaerica|type=transcript|length=1571bp
aacatcttaagaacatgcccaggaaaaaaatgacaagaaactacaatttt
ttcctctttttaagcagttttaaccgaatttaggggtggatcttcaaaag
tcaaaagtttTGGAGATATATGTGCAAAGAATTTTGGCTCGGGAATGATT
TGATCCATGAGAAAACAACGTCCGAAAATCACGATATTTTGATCCGAGCA
CGATTAACTACTGGACAAATTGTAGTATCAAGGGAAATGGTGTCATTGGT
CTTCACGTGTCGAAGAGTACATCTACCCGATGGATCACAATCCCGAATAT
TCCTCCATCTTGGTTCCCAATGTATTGAACGAACTTTTTAATCGATACCA
TTGCTAAACAGGGAAAGGCTGCTCTTTTGATTGGTGAACAGGGGACAGCG
AAGACaattatgatacaaagttacaTGAAACATTATGACCCTGAAGTTCA
TCTTACCAAAAGATTCAACTTCTCTTCTGCTTCTACTCCAATGCATTTCC
AGCGTACGATTGAAAGTTACGTGGACAAACGTATGGGAAGTACGTACGGT
CCGGTGGCCGGTAAACAGATGTCCGTATTCATTGATGATATCAACATGCC
GGTCATTAATGAGTGGGGTGATCAGGTGTCATTCGTTGTGGTCATTTTTG
CAAAGAGCGTGGTTTCACGGACGAAGTTAGAACTCTGGCAAATGATTTGG
TTGCTTGCACAAGAAGGTTGTGGCAATATACTAAGGTCAAAATGTTGCCA
ACGCcggcaaaatttcattacgTCTTTAACTTACGTGATTTATCACGTAT
TTGGCAAGGGATGCTTAACGCTGTCAGTGACGTCATCACAGAAACGTCCA
CGCTTTTGTCTCAATGGCAACACGAATGCACACGCGTTATTTGTGACCGC
TTCGTGAATGAGATGGATAAGAGCTGGTTCAGGAAAGTTGCTGTACAGAT
ATGTGATGAGGAGATTGGGGCTAGTCATGATTTGTCATGCTTGGAAGAGG
AAGCTTACTTTGTTGATTTCTTGAGagATGCGCCAGAGCCCACAGGAGAT
GAACCAGATGATGCTGATTTCGAAGCTCCCAAGATTTATGAGCCCGTTAC
TATCTTGGAACCATTTTCGAAACATATGACTCGAAattgaaagTATGGAC
AGCTTACGCGAGAGATTGTCACACTTCATGCATCAATATAATGAAAGCGT
TCGTGGTTCTGGTCTTGATCTGGTTTTCTTTGAAGATGCTATCACCAGCT
TGCTGAAGATTTCTCGTATCCTAGCAACGCCACGTGGCAATGCATTGTTG
GTAGGCGTTGGAGGATCTGGTAAACAGAGTTTGACAAGACTCGCTTCTTT
TATTGCTGGTTATAAAACATTCCAAATCACTATCACAAGGTCCGTGAGTT
TCCGGAAGTCTTTACTTCCGATCTTTAAAATATTTCTGAGGAGCTTTTTT
CTCGATTATCGGTGCACGGTGCAGAGTTCTagatcactgacctttatata
tccctgaaccaagctatatccgccatctttgatcgaaatttcttttgaat
tggtacctgtaaagaagccat
Run BLAST on NCBI

transcript from alignment at sc0000020:882962..896347+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002471 ID=TCONS_00002471|Name=TCONS_00002471|organism=Clytia hemisphaerica|type=transcript|length=13386bp|location=Sequence derived from alignment at sc0000020:882962..896347+ (Clytia hemisphaerica)
aacatcttaagaacatgcccaggaaaaaaatgacaagaaactacaatttt ttcctctttttaagcagttttaaccgaatttaggggtggatcttcaaaag tcaaaagtttTGGAGATATATGTGCAAAGAATTTTGGCTCGGGAATGATT TGATCCATGAGAAAACAACGTCCGAAAATCACGATATTTTGATCCGAGCA CGATTAACTACTGGACAAATTGTAGTATCAAGGTATGAGAGATTCACAGT TGCTAACGAATCACAATCATATCAAATGTATTTTGGTAAACTTATCAGTG GAATACACTCATTTGCAAACCTAACCCTACTGATAAGGAATCTAAATGGA AGTAGTTTCCATACCCCTGACAGAGAAAGTAGAACAGGTTGTGCAGAGAG ACATGGTTCTTTTTGGCATAACTCATGCGCTGATTTTCACCCCAATAAAT ATTGGAGACCACGTTGGAATGAGTTTAGAATTGGACATCCGACGGGGGTG ATAAAAGAAATTCAACTTTTAATTAGGCCTTCCAGTATGCCTTGAGATAG GAGGGAGCAAttgacgtgttttttataagaaccctGATCAGGCTTTCATA TCGTGTCTTAATCCACGAATGGCATCTTATTTATTCATATCTATATTAAC CCTTAAATGTAGTTTTTTTTGTGTACTTTATATTATGATTTTTGGTATTC TGGAAGAATGCATAACTGCTTTAACGGATTTATTTTGATGAATAtctgaa aaaacgacgatttgaCGATTGTTCTTATCCGAACAACCATATTTTTTCTG AATCGCAATTTTCGATCACCTAAAGGCGGTTTTAACTGTGTAAATATACA AGTTAAATCTCGATTTGAATCAATTAAATATTTAACTCAATAAAGTATGC CCAATTATTTTATCTCCCTAATATATCTTTGTAGGGAAATGGTGTTATTG ATCTTCACGCGTCAAAGAGTAGACCATTTCACCTTTAGGGTCTCGGATAT TGTTGATCGTACATTTAATCGAGTTAAAAACTTAGTATCCTCAATCATTT TATCTCCCTAATATTTCTGTGTAGGGAAATGGTGTCATTGGTCTTCACGT GTCGAAGAGTACATCTACCCGATGGATCACAATCCCGAATATTCCTCCAT CTTGGTTCCCAATGTATTGAACGAACTTTTTAATCGATACCATTGCTAAA CAGGGAAAGGTATGTACTTTCAACGCTCATAActcgtccatataacgttg catgttttttttaataagcaagtgtctgtccctattCCAGGCTCGCATCA TGCTCAGCATTCTATTTtcctcaaacaatagagccctTGTTTAGGTATCA AAAACTGaacctgcatatgcttatagaacgttatgcttataaaagaaaga catgTAGATGAACTTTGAAACAGCTCTGGAACTCCCTTGAGTAGTCTCTG GTTTATAATTTCTCGAGATTCTAAGAAAATGTAGTTTCGGTTCGGAATAG TATGAAAGAATCCTATCTGTCGcagttaaattttaaaatattctgtTTGG TAACAAAGCTGATAGGGTTTTGTATTTGACATATGATAAAGAATATGAGA ATATCTGAGAGAATATTTTCACCACCGAAATCAAGATTTCTTCACTTTCT CTCTTGTACGTCAGGCAGCTCTTTGATCGTAACTATAGTATTAAAATTCT AATCAGTCTACTATATAACTATTATCCACAGCCAACTGATAATTTAGACC AATAAAGAATAAAAGCAAGTCCGAGAAAATTTATCAAGTCaagatattca aaacaaaagaataaaatttcttGTCTTGATGAATGTTCTCGGACTTTTAT GTATTAGTTATCGgacaaatgtctgataactggtttatcggtgacccaaa aatgCACATTatgcacttttgtagcaaagtgacgttatattgctgctacc gctacaatgcagtaacatcttttcgtcaatttatatatatttttacacaa taaattgaagttgagataagaattgtttgatacttaaagtttcacgcaac ttttcgtcacgatcttcagtcaaaaattctatACAAAAAATTCNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTGGATTGGTTGGCT TATACGAAAGTTCGACGTTGTAGCCGCTTTCTTTCAACGCTTTCTCGTAC GGTTTTTTGGCTTCGGTGAAGATATGTTCGTTGGATGAGTGATTTGACAG TCGTTGTTCGATCGTTTTGGGTATTTGCCTGATCACGTTTGGAGGGTGGT TTGATTGAGTATTTATATATTGAAGTTTGTTGTCTGGTTTCAGGTAAGGC TTGAATGAACCATCTTCAAGGTTAAGAGTAATATCTAAATAATTGACGAT TGTCTTATTGCACTCAATAACGATCTCTAAACCATCCCCGTACTCTCGGA ATTTCGACTGCAAGTCCTTTTTGACTCGTTCCAACTTGCTCCCCGTCTTG CATTTTACAACTGAAAGTCCGTCATCACGATAAAGACCAAAGTTCTTTAT GTCGTACGTTTCGCTTAACTTATGCTGAAGGTAAATGCCGACGAGCTCGC ACACTTCCGCACCGTCGAACGCGCCCATTGTGACATCGAACAGACTACCT TTCTTTTTCATCCAGGCGGAACCGTCGCTAAAGCATAAAGATTTTCGAGC ATGCTGAATTATTTTTACGTCTTCAGTTGAGATGCGTGTGATTGGTTTAG CGAATTTGATAGCGTCGGATAGTAGCTTTTTAGTTATTGAGGGATAGAAG TCCTTGATGTCAAAAACTACGAACCTGTGCTGCTTTTTGTTCGGTATGGC TTTGAACCATTCGATAACTTCACTGGTGTTCTTCCATTGGTTGATTTCCA GGTGGGCTTTGAGATCGTTGTTCACTCTGTCAAGGATCGATTTTGCGATA CGGCCGATCTCGTTTTTGGCAGGATTCAGTAAACGCACCTTTGGATTGTT TTGGAAGTTCTCCTTATGGTCTTTTAGGGTTATGAAAGCCTCATCTTCGC CGTTTGTCAGCATTCTGCCGAAGACTTTCATGTCTTTAACGATTGATTTT CCGGCTGAATTGATTTTATGATGGATGTTTTTGTTGACCTTTTTGTATGT CGATGTGACGGCGTTTGTCAACAGCTTGTCGTGTTCTTCTTTGGAAAGCT TATAGAGATTTGTCGTTTTATCAGCAAACGTTAGCGTTGTTTTCGTGTTT TTGATCGTTTTGATGTCGTTTCTCAGAGTTTTTTGAAACTTGTTCTGGTT TCCCCTGAATTTGATAGATTTCACCATATCAAATAGGTCGTTTTCGAATG GGACCATTTCTTTTATCAAGGTTGGACAATTCAACGTTTTCATGCCGTAC GTCTCTGGTCTTGGTTCATCGTTTGGTTGTTCGAGGAAATGTGCTCGCCA TCTCATTCTTTTGATCACCATTTCGACTTTATCGATCAACTGGAGACGAT AACTGTGCTGGGATGGTGTTGGTATATTCTTGTAGGAGTAATCGAATTGT AGTTTCTCCATAACTTCGTATGTTGAATTTGATAGAGTGCTCAACTTTCG GAGCGTTCATATATTtttacaagatatattgtacttttttaaccaatcag attgcagatactttttggatcgccgataatcTTTTATATAATTATTAGAC ACATGAaggttttcatgttttttttgttaagTTGCGTAATCTCCTTAGAC tttgttatagtctaagacgaatcactatctaagaaaaaagcccaaagccg aagaaaatttacaaacgggtttttttgtcGAAAAAAGTTTACAGCCGGTA TAGTTTGCCAgtcttcttcgaaactctcccgccgatttttccCCGTatac cgcctttactatcactgtaacggacgataaagCGTCTAAACCTCCTCTAT ATTTTCAGGCTGCTCTTTTGATTGGTGAACAGGGGACAGCGAAGACaatt atgatacaaagttacaTGAAACATTATGACCCTGAAGTTCATCTTACCAA AAGATTCAACTTCTCTTCTGCTTCTACTCCAATGCATTTCCAGGTATGAa aaccttatcggggaaaaaatatTGTAGTTTTAATTagtcgggggaaaatt tcgtcagggaaaaatttcgtcacctagaggcattttcgtcacttttcccc gaccaaatttacaattCAGTCAGTTCCACCCGACTAAATTGTTCAAATTA AATCGtctccttcactagctcgaaaaagatcttgtaattcgacgtttaaa gcactagtTTCTGTAATTCAGGGTgtaaaaatttggatttgatATTTGGT TGGAGTgtgaaattttgagtaaaattttcGCTCGGGAACAAAAAAAtggg gtaaaagttttggtcgggtgataaaatgtcggggagttatttcgtcaccc cctcaaaattttcgtcactttcccccgacatttttttccccgataaggta gtttcTCTTTCAATTGTCAAGTACCGGGGTGTGCAACAAATaggtttctc tctttgaaactaactttCTCGAAATCGAAATATTTTAATAGAACCATTCc ttttccattggaaagaagaaagataaacttaaattttgattggtcTTTCG TTAAATTTGATCAACTAGATTTAAAATTATGcccaattgaataaaaaaag ttactttcggagAGTACTCGAATAtgttgaaaatgaaagaaaaattttgt ggcgcacccggtatattatCGACAGCCGAGGTTTGTCTGtgtttttctaa agatttttcTCCGCTTTTTGCGTTTTTATTACTATATATGGTGGCGTGTC TAATTAACGTTCTTTTCTCCGTCATTTTTTTACGTTTTAGCGTACGATTG AAAGTTACGTGGACAAACGTATGGGAAGTACGTACGGTCCGGTGGCCGGT AAACAGATGTCCGTATTCATTGATGATATCAACATGCCGGTCATTAATGA GTGGGGTGATCAGGTGAGGTTGTTTCATTGTTATTGTTTTATGCAGATCT TTACACAGAAGAACATCTATTTagcggacactctaaaaggcgggcCTGTC TCCACGATGGTGGAGATACTCCACTGTGATAATATCCGTACGTGTCTAGA GCCTTTCTCTGCAGCGTTTTGCATTTCGCTAGCGGATTAAGCTTGCCGTA TATTTCTTTCCAGTGGTTATGCTTATTTTTAACAGTTCATCATGAAAATT CTCATAAAAAGCATGTACTAAAGGATATTctcagggctcgaaataacgat atttaggtggtcggacacattgtccgatcaaaaattgatttgggtcggac atgtcctaagGCTTTTAANTAATACaagcttctgatagaatttCACATTG ATCAcaaagaagctaaacaaatgccaattaatggtcagaagcccatgatt tttacttgaagcatgcttttgtgtaaataaagaagttactaattctatgt aaattgtaatttcttttggaaatttcacaacgcctctgacaaattttttg aaggcaCTGAAAGTAATTaggtcggacatgatgtccgactagaatcgatt tgggtcggacatttcagcaattgggtcggacaatgtccgatgtccgaccg ttatttcgagccctgtatTCTACATAAGTATTCTTGTGTTTCAGTGTCAT ATCAGGCACATGTTTTACATCAGacccctattgttatattgtgttcgatt ttgtgctgaataaacaaaaaatagtttttctttcctttttgaaCCTTtat tgctccacatccatgtcaattcaatgtggaaaagcttgttggacctaccc cggtggaggtcctataaattaacctttgtccgtccgtccgttagttacca gcttttctcgagattggctcattagttttttctgattNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNaatttttcagctcaaaaaaagcatc tttatcaataagaatcactattaataaacatacatcaatgttcttagcca aattactcaattttttggagatgtttttgtttttggttcgaaaggttttt ttataagaaacaaacgactaattttaatagatcgtcactatttgtgttct gaatgattgtttaatggtcacgtcacgtagacatgggatcatccccccca ggaagatggggggggaattagattttggtgccaggggggaagtgaaaatt tcaagcttgatggggggagaaaggcgaatagggggtatattcagtcctct acctagtggggggagtaataggataaatacagaccttcctggtgtgtttg agcattcaggcttatgagcctgtctttcCTTTCTTgggattttgagagtc ttttttttgctatagcttgcgaattgaggcgagtctggatcatcacttcg caacccttatacgatacggctagggggatttcccaattggggggagcacg aattttaaagacaggtgggggggaaaggccagatgggggattttagctca tattaggggggaccaaaaagctggaggacgccatggtagatatcaattat aaacgtgttaaatgcataatccaggtaggtccatcaaagtatcacttgtt gatTTAAAATTAATGAGTAAGCATCAACTTAgtttaaaacaaaaccttta attataGATAACAAACGAAATCGTGCGTCAACTAATGAGCGATGGTGGTT TTTACAACCTTGATAAACCTGGTGACTTCACCACAATTGTTGATATTCAA TTCCTTGCCGCCATGATCCACCCGGGCGGTGGGCGTAAAGATATTCCAGA ACGCTTAAAAAGACAGTTCTCTATTTTCAATTGCACTCTGCCCTCTAACA ATTCAATCGACAAGATCTTTGGTACCTACCTTTAAATGCGCGGTCGGTTT CTAAGGGGACTGGTGATGAATTAATAATACGTTGGGTTTAAGattagtga gtttatgtattcgagataaatcgagggggtggtataaagcaaagttgaca tgtctccaaaatcactgtccactttgctcgacgacggtaaaaacaccaaa ataccgtcgtctgtttaggggagcaaaggcgatataaaGCCGTACATCag ctatcgactttgttttgtatcatttcacttaccgtcgccctcgatatcct ccgatacataaactcggtagtattaatgcaacgacttcagatGTCTTGGC GTCATTCCTTGCTAGTAAACTCGGACCCAGTCTTTGCACGCTTTAAAGGT TGATAGGTATATTAAACAAGAAGCCTCTCAGTTAGTTTTGTAAATTTCAA ATCTCTAATACCCTCTAATTTTGCTATCCTCACAGGTTTTCAAATTACTT GTAAAACATCTGCTTATTCTTCATTCCAAACTAGATCCTCGTAGGGAAAA TaatttccaatgcaatatcattcTACTTAAGAAGTCATATTGCTTCCTGT Cctctaccttaagtggataaattttggcgtggatttaatttggcgatttg CCAAAACACGAtctttggcgggaatttaatttggcgatagatcaatttcg taaaatttggcggggatttaatttggcgaattggaaattttgtcacactg aaatgggtgaaaattactcaaaaatatactaaaaagttgtgatttttcac ataattctctttttgttaaatttcgcggggatttaatttggcgaattgga aattttgtcacactgaaatgggtgaaaattactcaaaaatatactaaaaa gttgtgatttttcacataattctctttttgttaaatttcgcggggattta atttggcgaattgccgaatttggaagttttggcgaggatttaatccccgc caaaatttatccacttaatgTAATCCATCTTTGAAACAAAAGTGAGCTGC CCTTTTGAGGACGGTTCGaaacgatttggaataacccgtaGTTACACGTA CTGTTCTATcacattttaataatttttgtaataattttttcatttaccaG GTGTCATTCGTTGTGGTCATTTTTGCAAAGAGCGTGGTTTCACGGACGAA GTTAGAACTCTGGCAAATGATTTGGTTGCTTGCACAAGAAGGTTGTGGCA ATATACTAAGGTTTGTTTGGTTCTACTTTATAATGCCTGTCTTCAAAGAG ACTGACGTATTTTCAAACCTAACTTTCGACAAACGCTACAAATTTTAACT GAtcataaaacaaataaaacacaATTGGTTGGTTTTCCTCGTGTAGTGCT CAATCGTGATCCTTGTAAAACGAAAAATAATGTCTTGATCAATTACCCTT TAAAATATCGACCCGATGactgaatttttaataaatcttttttccTTGTA TAATTTTGATCTCCAGTTGACGCTCtccaattcgattttcaaagggaATT GAATTTTTGGAGTGAAtagaatagtagagcgtcgtttatgagagtttttt gttgacAGTAACTTTCAATatcaaataagggagcctatcaaatagtagaa cgtcgattAAGAAAGCTTCAACCGTCAACTGAGTTTTTTTACTTACCGTA AGTCAACTCTAGGTCCAATGGTTGATTCCACAATTGCGGAACTTAACAAA ACATGAGAAACTTCTATAGCTTGCCCTACAGAATCTATCCGTTTTTATGG TTTTGTGGTTTTGTGATAATAATCTCTTCCCGCATTATTTTCCGTCTTTC TTTAGGTCAAAATGTTGCCAACGCcggcaaaatttcattacgTCTTTAAC TTACGTGATTTATCACGTATTTGGCAAGGGATGCTTAACGCTGTCAGTGA CGTCATCACAGAAACGTCCACGCTTTTGTCTCAATGGCAACACGAATGCA CACGCGTTATTTGTGACCGCTTCGTGAATGAGATGGATAAGAGCTGGTTC AGGAAAGTTGCTGTACAGATATGTGATGAGGAGATTGGGGCTAGTCATGA TTTGTCATGCTTGGAAGAGGAAGCTTACTTTGTTGATTTCTTGAGGTGAG TTAAGATCTGGACATTTCGTGCTATGGAAATAAACCCTCCTTATTTCATC TAGCGGAGTGTTTGTGATTGTAAATAGCTAAAAATCTCCCATTAAAGCTT AAAACAACTTTAAAGCTTGACAAAGTCTATCAAGGATAGTTACCAATAGG AAAGTTAACGTTAAATTTGAAAAGATTCTCCTAATACATCTGATATCAGA TTTCCATGATGGTAACCCCTCAAAGCATCCAATCTGATGTCTGACTTTCC ATAGCCTTCTGATGGCTATATTGTCTTAGTTGGTTTGTTGGCAATACAGT GAGAAAGAGTtgtgccctcccctacctttgggtagatagctatcgaaaaa aGAGCCTTCTGGATTGCTCTTCCACTCTTAAAAGCTTTTATCTTTCATTT CAAtcttatgtttcatttttcagagATGCGCCAGAGCCCACAGGAGATGA ACCAGATGATGCTGATTTCGAAGCTCCCAAGATTTATGAGCCCGTTACTA TCTTGGAACCATTTTCGAAACATATGACTCGAAGTATTATAGACGAAATC AATTTACCGGGTGATTGATAAAAATCTCGGTTACTGATCCCTTTAGATGA ACCAAAGCCTAAGTCTAATGCATTCACAGTTTTGTAAACATtcccttttt cttttattgataaaaatctcGGTTACTGACTCCTTAAGACCAACCAAAGT CTAGTCTAGTCTAATGCATTCACGGTTTCATAAACATctccttttctctt ttttttttaaagattgaaagTATGGACAGCTTACGCGAGAGATTGTCACA CTTCATGCATCAATATAATGAAAGCGTTCGTGGTTCTGGTCTTGATCTGG TTTTCTTTGAAGATGCTATCACCAGCTTGCTGAAGGTAAAGTTTGtcaag aaaattttaagtttaagcAACTTTAGGTTTCTGCTACCCAATATCAAAAG TGGAACACAACCCTAGCATGCGTTTAAAGaaactatttttttgttttgaa atagataaaaactttcaagaaaatgcatagtaagggtcgattttgcgcct aaatttggctaaattttctcttCACTGTAATGTTCTAATTTTGAGACCCT AATTTTTTCCCGCCCAtacggtcgttttcagatcggtTTTGGCCAGTAGT GTCAAATTTAAAATAGACataagttgtataaaattttccGCTACtagcaa aaaccggggtctttccgtagaaaatattacgtcatgaatatcatgaatct tattttcttttttctttctacaGATTTCTCGTATCCTAGCAACGCCACGT GGCAATGCATTGTTGGTAGGCGTTGGAGGATCTGGTAAACAGAGTTTGAC AAGACTCGCTTCTTTTATTGCTGGTTATAAAACATTCCAAATCACTATCA CAAGGTCCGTGAGTTTCCGGAAGTCTTTACTTCCGATCTTTAAAATATTT CTGAGGAGCTTTTTTCTCGATTATCGGTGCACGGTGCAGAGTTCTagatc actgacctttatatatccctgaaccaagctatatccgccatctttgatcg aaatttcttttgaattggtacctgtaaagaagccat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001322XLOC_001322Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002471-exon-sc0000020-1491911889:882962..883193TCONS_00002471-exon-sc0000020-1491911889:882962..883193Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:882962..883193TCONS_00002471-exon-sc0000020-1510915933:882962..883193Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:882962..883193TCONS_00002471-exon-sc0000020-1575043694:882962..883193Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1491911889:884036..884170TCONS_00002471-exon-sc0000020-1491911889:884036..884170Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:884036..884170TCONS_00002471-exon-sc0000020-1510915933:884036..884170Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:884036..884170TCONS_00002471-exon-sc0000020-1575043694:884036..884170Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1491911889:887720..887854TCONS_00002471-exon-sc0000020-1491911889:887720..887854Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:887720..887854TCONS_00002471-exon-sc0000020-1510915933:887720..887854Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:887720..887854TCONS_00002471-exon-sc0000020-1575043694:887720..887854Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1491911889:888652..888774TCONS_00002471-exon-sc0000020-1491911889:888652..888774Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:888652..888774TCONS_00002471-exon-sc0000020-1510915933:888652..888774Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:888652..888774TCONS_00002471-exon-sc0000020-1575043694:888652..888774Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1491911889:893762..893871TCONS_00002471-exon-sc0000020-1491911889:893762..893871Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:893762..893871TCONS_00002471-exon-sc0000020-1510915933:893762..893871Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:893762..893871TCONS_00002471-exon-sc0000020-1575043694:893762..893871Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1491911889:894467..894756TCONS_00002471-exon-sc0000020-1491911889:894467..894756Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:894467..894756TCONS_00002471-exon-sc0000020-1510915933:894467..894756Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:894467..894756TCONS_00002471-exon-sc0000020-1575043694:894467..894756Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1491911889:895185..895294TCONS_00002471-exon-sc0000020-1491911889:895185..895294Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:895185..895294TCONS_00002471-exon-sc0000020-1510915933:895185..895294Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:895185..895294TCONS_00002471-exon-sc0000020-1575043694:895185..895294Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1491911889:895524..895646TCONS_00002471-exon-sc0000020-1491911889:895524..895646Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:895524..895646TCONS_00002471-exon-sc0000020-1510915933:895524..895646Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:895524..895646TCONS_00002471-exon-sc0000020-1575043694:895524..895646Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1491911889:896035..896347TCONS_00002471-exon-sc0000020-1491911889:896035..896347Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1510915933:896035..896347TCONS_00002471-exon-sc0000020-1510915933:896035..896347Clytia hemisphaericaexon
TCONS_00002471-exon-sc0000020-1575043694:896035..896347TCONS_00002471-exon-sc0000020-1575043694:896035..896347Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:882962..896347 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.192875 0 0 0 0.480151 0 1.70304 0.386673 0.148563 0.406889 0 0 0 0 0 0 0 0 0 0 0 0.249124 0 0 0 0
Blast
BLAST of TCONS_00002471 vs. Swiss-Prot (Human)
Match: DYH8 (Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.331e-75
Identity = 86/156 (55.13%), Postives = 109/156 (69.87%), Query Frame = 1
Query:  625 GVIRCGHFCKERGFTDEVRTLANDLVACTRRLWQYTKVKMLPTPAKFHYVFNLRDLSRIWQGMLNAVSDVITETSTLLSQWQHECTRVICDRFVNEMDKSWFRKVAVQICDEEIGASHDLSCLEEEAYFVDFLRDAPEPTGDEPDDADFEAPKIYE 1092
            G+I CG+F   R F  ++  +  +LV+  R LWQ+TKVKMLPTP+KFHY+FNLRDLSRIWQGML   ++      TLLS ++HEC+RVI DRF+   D+ WF     +  +E IG S   SC+  E YFVDFLR+ PEPTGDEP+D+ FE PKIYE
Sbjct: 2608 GIIGCGYFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLTIKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIG-SDAASCILPEPYFVDFLREMPEPTGDEPEDSVFEVPKIYE 2762          

HSP 2 Score: 119.783 bits (299), Expect = 2.331e-75
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 2
Query: 1136 IESMDSLRERLSHFMHQYNESVRGSGLDLVFFEDAITSLLKISRILATPRGNALLVGVGGSGKQSLTRLASFIAGYKTFQITITRS 1393
            + S D L E+L  +  Q+NE +RG+ LDLVFF+DA+T L+KISRI+ T  GNALLVGVGGSGKQSL+RLASFIAGY+ FQIT+TRS
Sbjct: 2764 MPSFDFLAEKLQFYQRQFNEIIRGTSLDLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS 2849          

HSP 3 Score: 174.481 bits (441), Expect = 3.943e-52
Identity = 78/105 (74.29%), Postives = 92/105 (87.62%), Query Frame = 2
Query:  329 TNFLIDTIAKQGKAALLIGEQGTAKTIMIQSYMKHYDPEVHLTKRFNFSSASTPMHFQRTIESYVDKRMGSTYGPVAGKQMSVFIDDINMPVINEWGDQVSFVVV 643
            TNFLIDTIAKQ KA LL GEQGTAKT+M+++Y+K YDPEV L+K  NFSSA+ PM FQRTIESYVDKR+GSTYGP  G++M+VFIDDINMPVINEWGDQ++  +V
Sbjct: 2438 TNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQRTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIV 2542          

HSP 4 Score: 50.0618 bits (118), Expect = 3.943e-52
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 1
Query:  232 GKWCHWSSRVEEYIYPMDHNPEYSSILVPNVLN 330
            G W HW+ +++ Y YP D  PEYSSILVPNV N
Sbjct: 2403 GDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDN 2435          
The following BLAST results are available for this feature:
BLAST of TCONS_00002471 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYH82.331e-7555.13Dynein heavy chain 8, axonemal OS=Homo sapiens GN=... [more]
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