TCONS_00002454 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002454
Unique NameTCONS_00002454
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1635

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002454 ID=TCONS_00002454|Name=TCONS_00002454|organism=Clytia hemisphaerica|type=transcript|length=1635bp
gtctattttaGTTTCGTTTTATAGCATATAcactataaaaaaacaaactc
aaatataaaaaagatgGAAGACAAAGGCAGAATGGAAGAAATCCCGTGCA
TTATACATCCGTTGAAATTAATGTATATGGAAGGTGAAAAGTTGAGTGGA
TGTGCTGTCATTGAAGCTGTGTTTTCCACTCCGACAGGTGTCAAGctCTC
GGAGATGTCATTCAAAAATCACTATGTTTACAAATTCACTGTTAAAGGGG
GGACAAAATCAGgaGATTTCATAACGCtggttcaaaatcaaaatcttatg
AACATTCCACACTCAGCCGCTGAAGCACAAAGTCACCATCGAGTATCGCT
CGTAAAAAAACACTCAGAAACGTCCAATCATCTTTTCACGTCATTACGAT
TTATATTACACCAGCCATCACCTCGATGGCAAACATTTCGGTTGGACGAT
ATCAAATTCTACAAAATAGTCAAATCAGACAGTGAAACCAAAGATGATGA
AGATCATGTGGACaaggaagaaaagaaaacagTCAACGAGtattcaacaA
AGCTTAAAAGATTGGAGAGTGGTTTGAAATCAGCAAGGGAGGTTCTGAAC
CAATGTGATTGGATGAGCGAAGAAAATGTTGTCAAGCCGTTTGAGGTTGA
CGGAAGTTATGAtatcaatttgctttcttaTTCGTCACCCGCAACTACTC
ATTCTTGACTGAAAGAATTAATGAGATGGAGGAAAGTCGATAAATGGCAA
AATGTGCAAATAATATGAATCCACGTCAAATTAAAGGAATACAGATCTTT
AAGGGCTAAAgcttttcttcgaattaaagaaagatgaGAAagacagagta
gctctatctagtgttagTGGTTAGAATATCTTCATGTTAGGGTGAGTGCA
AAATACAATTCAATTCGTCTCGTTTTAACGCGAAATTCTAACGCTATTTT
TACTGTAGTTTTTTATTGTAACATTTTTCAAGCTTAGAGAAGCTGGGATT
TCTTCTCAGAATTAGCAATCTATAACatatttaaaaatgaaacaaatgca
TGTTTTCCTTCGTTTAATTCTCGTCTTTGTAGGCGGCGGATATAGGCGGA
TATAGGCCACCAGACCCGAGTGGAATAAGTTAGTATGAGTTGATTATCTA
GGGAATGTTTTGatgaaaagattttgaaaattagggaTCCACTCATGTTT
GAAAATCAACCCATAACTATTCTTGGGATCAAAACTATCATCAgaataat
agcgagtttatgtataggaggatatcgagggcaaCTGTAAGTGAAGTCGA
CGCAAAataaagtcgatagttgatgtacgatTATATATTGCCTTCGCTCA
CCTAagcagacgacggtattttggtgtttttatcgtcttcgagcaaagtg
gacggcgattttGGCTACATGTCAACGTTGATTTATACCGTGTCCTTCAA
TTTATCCCGAATACATGAACTCGCTAATAGTATttatatatacaaaaata
ttCGGTATGTGTTATATTTATTTGTACATAGGTATCAAAGTATGAATTTT
TAATCTACATAGATTTTACGTCTTTTTTATTTGTACATAACGACAACAGA
GTTTCACTTTGGTTAATGTACAGAACACTTTGAAA
Run BLAST on NCBI

transcript from alignment at sc0000020:645045..657692+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002454 ID=TCONS_00002454|Name=TCONS_00002454|organism=Clytia hemisphaerica|type=transcript|length=12648bp|location=Sequence derived from alignment at sc0000020:645045..657692+ (Clytia hemisphaerica)
gtctattttaGTTTCGTTTTATAGCATATAcactataaaaaaacaaactc
aaatataaaaaagatgGAAGACAAAGGCAGAATGGAAGAAATCCCGTGCA
TTATACATCCGTTGAAATTAATGTATATGGAAGGTGAAAAGTTGAGTGGA
TGTGCTGTCATTGAAGCTGTGTTTTCCACTCCGACAGGTGTCAAGGTATG
TTTGCTATTTTCGATACTACTATGGTCACCAGTAAAAGAAGTTCATAACT
CCCAACCAAAGCAATGTTTTTACTGTAACACTAGGAAAAGACAATCTCTT
TATTAGATGATGTATGATAGGTATATTCTTAATAAGTCTGCGGTAAGtca
gaggcgacccgaaggctcctctttcaataGCTATCTACTCGAAGGTAGGG
AAGGGCGCCACtcctccctggatttctccacttacccttgatgcttctct
taattgctgagagGCATCAattaccattttgagaatctttggtacgccca
caaccttgcgaaccttagacggatgctctaccactgtacggTTGCTTATC
TACCCGTCGAGGTCGGTATATTCTGATGTTTTTGGGTCATTTACATAGTT
TGTAACACCCTTTTTAATAGCGGGCTGCCATATTTTTTGGTTTGCTTTTT
AGGGGGGATACCAAGTATTCCCTATAAAACTGGAGGGATGGGAATGTAGA
GGgggtttgtttgtttgtttgtaattgtaatttatcGTTGACATAAAAAT
AAATAGCTACCAGGCAAATACAAGTCAACCTATTTACAACTTATTTAGTT
CTTAAATGAAGCTGACACCGTCAATGTACACTTTACATATTCTACACGGA
CATAACGTTGGTTTCTTTAATTCCTTAAGGTCATTAGGATGTCGAAATTC
TTGGGGAACTAATTCCCATATTTTTGGGCCCTGATAAGATAGAGACTCCT
CACCATGGAACACTGTTCTGATGTTTCTAGGTTTAAAAAACATTTGATGT
CGTGTGTTCGTAGACTTTTCATTATATGAACAAATATTCCATCATTTAGC
TTTGAAATGTTTGATTTGCATTTGAATAGCTCTGTTGCCAGAAGCTGAAT
ATTACGATGGTGGAAGGTTACTGAATTGTCTTTCTCTAGAAGTTcttcaa
aagtcaaattttctTCAGGGAAGACTATTCTTAAGCATCGTTCATGCAGA
TGGTTTATCTTATTTTCTAGGCGGCGGCTATGAAACATCTAAACTAACGG
ACAATAGTTAAactgacttttgaaaaatgcattCATTAGTTTTTGTCGTT
TAGCTTGATTCATATGAGGGACTATTCTCGCTAGAGCACTAATTTTTTGA
CTTGCCTTTTTACAGCGTTGTTCGATGTAATTTTCGAATGTGAGATGGTT
GTCAAAAGTCATTCCTAATATCTTAGATGTGTTGCTATTTGAAACCCGCT
GATCTTGAATTGATATACTTAATTCGTTATCGATGTTGTTAGCAATGAAT
TCGGTTTTCTCGGcattttctttcatttgattATGTGATAACCATTCAAA
TATAATGAAGGCAGATGTATTTAGTTCTTCCTCAACTTCGTCCCATGAGT
CTGCTGCTGAAAAAGGTATTGTATCATCAGCATAATTTAGAACCGTATCa
tttagaaaatagaaaagatcTCTTAGGTATATGTTGAAAAGTAATGGCCC
AAGGATGGATCCTTGTGGAACCCCTACTGAAATGTTATGCCAAGTACTAT
AGCTGTCTCCTATTCTAGTCCTTTGTTTTCTATTCGTAAGGTAATTTCCA
ATCAATTTAAGAGCATTCGTGCTGAAGCCATAGGCTTCCATCTTTGCAGT
AAAAGATCGTGAGAAATGCAATCAAATGCTTTAGAAAGTAATGCTCCGAA
TTTCTGTCTATCATCAATGGCTTTTTTCCAGATTTCAGTTAGCATCAGTA
GCGGTGCTTGCGTACCTAAACCTGCCCTATATCCACATTGTTTTTCGCTG
TACATATCCTCGTAGAAATCTGAAATTTGATCATGTAttattctttcaaa
aacttttgagagCACAGAATAGTCATAGTCAAATAAGAAGTgcagtttga
aaattttggtcaatttaatCATAAACAAATGGTCACAGTctattttaaag
taaaaatatatGTACCATCAAAACACGAAAGAGTCTTGATAAAAACACTA
GTTATAATTGTTATAGTGTGAAATTTTTGGCTTGTGACTGTTTAATATAG
TCTCTTTGATCACTTTGGTGGTGCATAGAGTGAGTTTCCTTCAGAACgaa
ttttctttaagaaaaagggggataaaatttcattacagaaaggggatggg
tatataggagGGGATGAATTCATTGACTCCCGAAGGGCCTGTAAGGGCTA
ggctcgagactcctggatgggaaatgaagccactcatttcccatccagaa
cgcccgcgcgttgTTTTTACACAACGCCGAATTGAAAGTGAATTCTATCG
ctagattccaaaaaatgtagtcctcaaaaacaaaagaaccgctagataca
atccgtcgtcatgattgcggcacGTTCCAGGCGccttctggatgggaaat
aagtaacttcactttttcttgcctgggaaaggttagagattctactctag
ccctttgggtTTTAACATCAATGGACGAAATATACCTAGGGGGTTCATGC
CCCTCTGCCTCTATGATTTAGCGTGATCCGggcttttaaaattcatttcg
gAAAAACGAAGAATGACAAGGGGTTGTTtgaattttataaaatattattt
agaagaaagatgaaaaattatgTATAAATGCTTGgaaaaatcaagcaaaa
atataaaaacaatttaCATAAGACTCGGAAAAATCGAGCAATAAAATTAT
ATGGCTTGGAAAAATCAAGCGAAATCAAGTAAAGACTCTTTGGAAAATta
agagaaaaatattattgGACTCGGAAAAATCGAGCAATAAAATTATATGG
CTTGGAAAAATCAAGCGAAATCAAGTAAAGACTCTTTGGAAAATtaagag
aaaaatattattgGACTCGGAAAAATCGAGTGATAAATTTTAAATGGCTT
GCaaaaatcaagcaaaaaattgatataaacgCTTGCAAAAATCaagcata
aaattaaaaaacgctcagaaaaattaagcaaaaaaatattaatataaggc
tcggaaaaatttagcaaaaaataaGTGAACACTTGTTAAAACCAAGCTAT
AAAATGATATacaaaacgaaaaaaataaattgttttaatttaaaTTGTGG
TGATGCTTGTTTCACCTGCAACATCAACAAATTCAACATTAATTTCAATA
TCTGGAAACTCAGTCTCGTTGTTCGTTTGACATGGGCGTTGTCTTGCTCC
ACCACAGCTTGTAAATTTTTTCCAGAACATGAGTGGTTGATACCATTTCt
tagatttttgtttttgttgtaaaGATGTGATGTTGTTATGAAGTgatttc
tacaaaaagaaagTGGATGGTTTTGATTTGGTTGTTCTTTTGGGAGGGGT
ACAGATGCGAAAACGGTACTGGAATATGCTCAGGTAGGATCGCAAAAATT
GATTTAGATTGCCTTAttcagcaaaatttgcaaaaaattggATAActgtg
taaaatatttttggttatttttcgCCAGGGTTATTTTTTACGCAAGGGTT
AATTTTTTACGCAAATCTCCGTCAATTTGCAGAGTAATACTATTCAGACG
CCTGGACCAGCTTTAGTATCCCTGGGATATTTTTGTTCTATATGATaggt
attttttaaattttggttaTAAACATACTTGTTCTTGTTGCAACTTTTCG
ATGGTTTCTTTCAATTTGGCGATTTGGTTGTTTTGGAAAACAGTCTCATT
TTGCAATGTtttctataaaatgaaaaaatgtaaaatgattAAATGTTGTT
TGAGCTTCATGTTCATGTGACGCGATCGAGAGAGTCTGATCATATTTCTA
TGTTCACTAGACCAGGGAGAGCAAATACAGAATTTAAGAGCATCACCAGG
TTTTAGAATGGATCTTGGTTTACTAACAACAGACATTCAGTAAGTTATTG
GTTGAATTATTGGTCGAGTTATTGGTTGAGTTATTGATCGAGTTAATGGT
TACCATGGAATAAAGATCACGAATTGTATAATTATCCACTTTCGCTTAAC
TTAGAATAggttttaatttaatttttttttaatctcaaaTACTTTAAGGG
AGGCTCACAAACTTACCATGGTTTTTTCTTTATAACCAATCTTTCTTTCA
AAGACACCAATTTTCTTTTGTGCTTCTGCAATGTTCGAATCTTGTTCTGT
AATCTGTTGCTTCTGAAAAAGTTGGATATCAAGTGTAAAATAGTTGATCT
ATGATTAAGTACTTTGACGATGCTAAATGTAACTAACCCCGTGTATAAAT
ATAAATAGCTAATACGAGATTTCAACTTTCTATTTTAGATGAGTTGTAGA
AGGTTTTGAGACCCATTTACTTACAAATACAGACGATTTCAATTATGAGT
GTCCTGGTGAGGGGTGGGTGTGTCTGTCCTTACAAAAGCTCGAAAATCGA
CCCTgtgagagactgaatttcggaaatttacacttttttgacgtttttaa
gACCATATGCGCATTGGTTGACCTGGGCGAAGGTTCGTTCACTTGCCAAT
TGAACCGCTGTGAGTGGGAAGCGAACCCTCAATCGCCTGTGTAGCAATCA
AGGTTTATCAATGACCATCAACCAAAGTATAGACTGTCACGCTGACACTT
CTGAGTATTATAACTTACTTGTAATTTGATAGTTTCTTCTTGGTTTTTAG
TTTTCTCTTGTAGATCTTCAACTTCTTTATCTTTCTCTTGTACAAAAACC
TAATAAGAGAccaaaaatcaaccaatcaaataaACTAAGTTTTTGCTTTA
CTCTTTAATTTTGTAACATTCTATGACTGTGTTGAAGTtcagaatttctt
tttcttcgtcAGGTTGGTAGGAGATCTTGGGTTttactttttctcaaata
tgtACCTGAGCAGTCGAGACTATCACTACTTGTGCTGCTCTTATACGAGG
CTAACTATTTTACTTCGTTGAAACGTACGAACGAACGTTGGCCCGGACAC
CTATCTGTAAACAATAAACTGAACTGAAATCTCATACACGAACTACAATT
TATGATCTAAATAAGTTTGACTATATCGtcccagtgatattcatattgga
aaTTTATCGTGACTTGGATAACAAGATTTACGTaaagccaaacgtaaatc
tcgtgatccaagccacgataaatttccaatatatattttaatttatgata
ttcattgcgtaatcttttatacggaaacacccgaaaaagaAGGGGTGTTT
GTCaccaattttgaatttgaacaaTAAAATTAGTAGTAAGCGCCCGGGCT
ATTCTGGGTTTCTCCGTATAAAACATCACgtcataaatatcatgaatGAA
CGACGTGTCCATTTCTTATTACGCTTTTGTATGCCTTCTTTTTACACGAT
ATACTAtcgatgctctctaattcgattttcaaggggaattggatttttat
CGACTAATGGAGCGTATTAATTAGTATGAGAGTTTTCTTGTTGACAATGA
CTTTCAATAATAGCgattttatgtatttgcacttttgaggacggtaagtg
actgaagtgatttggaataacccgcagtgttgacccgcaaaattaaggac
ggtaaaagtgctgatttaccgtcgtcatTTTAGTCAGTAAAGaatgtaga
caaattagaaccttgccgtctccgtcgcagaaaaacacacatacatatgg
agcgcatcgaatagtagaacgtcgagtTAGAGAGTATCAACTGTGATAAA
ATCTTACCTTTAATTTCCGTTCATGTTCTTCAAGGAATGAGTCATATTGT
TTTAAAACTTCAATTCTCTCTTGTTTAGCTTTGTCTTTTTCAGCTATCGC
TTCTGCTAATTCATCTTTTACTGTCTTTGCTAATAAAGTTTGTGACTTTG
CTTCACCTTTGTAGTATTGCAGTTGCTAAaatgattttcagaaaatttaN
AGCTTTGTCTTTTTCAGCTATTGCTTCGGCTAATTCTTCTTTTACTGTCT
TTGCTAATAAAGTTTGTGACTTTGCTTCACCTTTGTAGTATTGCAGTTGC
TAAAacgattttcagaaaatttacgTTGTTAAAGGTCATCAATTAACGTC
AGGTACAATGGAAGCTTTTTACATCTGGTACGgctaatgaaaaaaatttt
aagcgattttatagtgATTTTATGCATccgccgtacctgccgtacccgtt
gtGTCGTGCCTGGACGTATCTCcgtaccatttgcttacacatcattttca
aacaaaagaaagaacgaCTTTCTCCCCTTTCGGTGTCGTACGAGCCCACA
AAATCTTTTGCTTATTCTGCTTTGTCtggtgtaaaatatttttttggcac
CACTTAAAGAATAAACCAAAGCTGGTTATCTAAGAGATTTTTGTACCGTT
TCATACTTCGTTAGCTTCGTTAGCTTCGTTCGTTTCTCATCGGAAATTTT
Gctcaatcaatagatattcaattttcgaaatgattgaataggtttttgaa
attgaagtattaaaggttttgtttttaaatgagagtgataccgtttgctt
actcatcaattttaattcacaaactTTTACACATTGGATTGGCACGGTAG
AGGAGTAAGATTGGTTTAatagaggaaaagaaaaacgtttcttcgcttat
atcagcataacataacaataggcagacactttCCTGATACGAAATTAtgt
atctgatatgaaacgggaacacttatgtaaaaataaaacctttaagtctA
CAAATCATTTATTTATACGCTGTATAAAAACAGTATTTGATTATGCACAC
TCTCAATCAAGGGACACATGGAAATCATGTACTCTTAAACCCCGGGggga
gtacttaggcaaaaataggtgctgggtatgtgcggacggtaagggtcggg
tttttcacctttcaaagtctctctaagggttacaaaaatcagatNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNccccccccccgggtctttAACTTTGACTGTATCTAAA
ATGGTTTGATATCTCTGACAAGTTACGGTAACAAAGCCAAGAACAACAAA
AACTTTATAGTAAATTCATACCTCCTGTGTGTTTTCATAATCTTTAAGCA
CTTTTGAATATTTGAGCTCGTAAGCATCACACAATGTTGAATGCTGACTT
GTGGTAGCTGCATTACAATCACCATCACTGTCCTCTTGAACGGCTTTTTG
CGCAGCTGCTTTTTGAAGATCGATTGCGATAGTACTGTTAACTAGAACTG
CAGCACTGTTTACTAGAACTGCTTTTGCTAAACTTCCTGGCGAGCCGACG
CTTAATTGAACAGTACTGGGTTGTTGACTGTCCattattctattttattt
cGTTGTAAGTATAGTTTCTTGACTTGGATAACCGATTCTCCTACTGTGAA
ATCTTGAACTGACTTCTTCTCTTTTAACTGCGTTTTGAATGTATgccttt
ttggaaaaatatttacttcgtactttgtatttttatttgacgtcagttca
TATcttatatttgacgtcaattattaaagtatttcAACGTCATTCCCCGT
GACACTGTTGAACCAGTCTGATAACTAATTAAAGTAGGTAAAAAAATGGG
TATCGTCGCCCATTTAATGTAACATGCGTAAGATATCTTTAATGATCCTA
ACGGATGTTTttgtaaaatatggaaaaaatacaGTAGACTCTCCCTTATT
CGAACCTTTCTCATTCGAATGAGCAAGAGTCAACAGTAGGAGGATGTTGC
TCGAAAGGTTGAGAACATCTGGATTCAATCTTGATTTCTTTCGTtgcata
ttttctttttatagctCTCGGAGATGTCATTCAAAAATCACTATGTTTAC
AAATTCACTGTTAAAGGGGGGACAAAATCAGGTAACTTTCTCgaacattt
tttgaaacaataaataTATTAGTCCAAATGTAACTCATGACGATTATGAA
GACTCCTCAGTGGATTACATGAATACTCGAGTGACTAGCCCGGGGGCaac
ttatagctttttgatagtcTGGATGCCGCTTATAGGTGGACCGATGTAAT
ATTCTAGATtcctatttttgtttttgcttgagCAGTCCCTCAGATACAGT
CCCTTATGCGTCAATGTTTGAAATTATCTTTACAACATTGGCTTTTCTTG
ATCTAGGCTTATGTCTCTCGAATCTTTCAAAACTTAATGTGAATCTGAAT
AAAAAGAGAGGATGTTCTACCCCTTAgttaagaaactttttgaacttgta
tcatgaattttattttatccattttctttttataggaGATTTCATAACGC
tggttcaaaatcaaaatcttatgAACATTCCACACTCAGCCGCTGAAGCA
CAAAGTCACCATCGAGTATCGCTCGTAAAAAAAGTATGTTCTTCGTCATA
CTTAACAcgcttttttctttataagaatattcatgatgaaattggccaaa
aaataaagaatatgctaagaatactATCTATCGCCAATTATCCCCTAGCA
ATgccaaaagctttcaaaaaaggCCAATACGCTAAGAATATTTTGGATGC
TTTtccccaaaaaattaagaatatcaatGATGATTGGGAAAAAAGACCAT
TTAGAAGCGTGTATGCGTGTTTTTTTCTTGTTGACTGTCAATTGTCAATC
GGTAGAGAGAAGTCGATGTTTGTGTAGCTATTGAGCAAAGCACCAGTGAT
TTCCAAACCCCAGCCAAAATATCCAATCAAAGATTGATGAAACGATTACC
GAATTTGTCTAAGGCGCCAGCGTAACAATCCCCGGTTCGATTTCCTGCTc
tttccaatgttccgttcagttcctACATTCCCAAGCCAGCTGACCGTGgt
cccgtgaaaacaatcgaaagactgccgaaagttctagattactgggctaa
aAGTTCCACGTATTCTGCGTTTTCGACATCGAGTGtgttttaataataat
aactagccggtacccagcgtcgcacgccggttaagatgtagctgaacgca
ctaaaagtcctttggatgttgaagctggcttgaaaaacgatcaaatgaat
aaaaagatatcttcaaagtttgactaaactttcttggtaccgttggaagc
AGGATTTTATGTAGATGATCATACTCAGAGCCTCTTGATGAGGCtcttgg
ggaaaacttttggtaaaatcaagTCTGAAGTGTACTTCTTTGCCCCAAAA
TAGATACGTTTTTGAGCAGTGCACTGGTCGTCAGCTACACTAAAAACCTA
TCAAAGCCTTTGAAAGTCAGCGCTATCCCCATGGGCTTTCGCCTTGCACT
TGACCCATTTCATATCATGGATGACACTGTTTAATTGCTTGTGGTCTACA
GAAATGTTGTTGGGAaatccccccccaaaaaaaaaattctttaagaGTCT
TTTAAAAGGTACCTACCATTGCAAGGATAGCACTTTTCAAGGCATTTTAT
ATCGAAAATGGGtctttattgttttatttcaccaatttttttccccaagg
gcctcaacgtgaggctctgagtatgttaGAACTTGTAAAATTCCgcttcc
aacgataccaagaaagtttccgcggaatttttttcaaggtcaacctttat
ttctgccagactattaaatttcaaaacaaaggctgaataaagtctaaacc
aggctttatttgatctgtcaatcaaaagaaacttattgagaacaaaacat
tgcttgcgaaatcgaaagtgacacacagacagaaaacagaaaacagaaaa
cagacatacagactacgactattaatatatagatgctatacaagttcgca
ggccaccgtgtgagcacatgggcctctatgaaccgctctATGTTCGGCTT
ACAATTTTCTTGAAGTTTTTATTACTTCTGAGAACACAAAAGTAATCTGc
cctaaatttttttaatcaaattttctcTCTTCATAGCACTCAGAAACGTC
CAATCATCTTTTCACGTCATTACGATTTATATTACACCAGCCATCACCTC
GATGGCAAACATTTCGGTTGGACGATATCAAATTCTACAAAATAGTCAAA
TCAGACAGTGAAACCGTAAgagattcattttttttaattgattttgattt
aacGCCTGAATTCCGGTTCACCATTTAATTCGGCGCTTACAGGGCCCAGA
TAATgtcattttggaaaattattagCTATGTGAGAAGTGAAATCCCTACG
ATGGTCAATTTGCATTAGGCTTTCCGATTAGGAGTTCAGGTGTTCTACAC
ACTCGACAAGCGCTTCCTACTAAATTTCATGTTATAAAGATGCAGTTCTC
ATTGCTATCAAGTCATCCCAGTTTGGAAATATTCAGGCCTGAGTTGGAAT
CTTTAGACCTTTATACCGGCTGAGTTACTAGTCCAACCACGCCCAACTCA
TCGAAAAAATACAACATTTTTATTATAGAAAGATGATGAAGATCATGTGG
ACaaggaagaaaagaaaacagTCAACGAGGTAATGTCTCAAACTAGTAGA
CTGCCcttaattcgaatatttcttgaATTATTGAGGTGATTCCCTGTCCT
CGCCCACTGAAAATACTTTCGAACAATTAGATTCTCCGTTCAAATCCGAA
TTAGTAGAGACACAACTGATTCTGTTTTAGTTTCCCTTGAACGTtcacaa
aattaaatttaagCTTACCAAGAGTTTATTGTAAAGCCCATGTGCGTTTT
TGCATACATTATAGTTGTTTAacatttgaatttcagtattcaacaAAGCT
TAAAAGATTGGAGAGTGGTTTGAAATCAGCAAGGGAGGTTCTGAACCAAT
GTGATTGGATGAGCGAAGAAAATGTTGTCAAGCCGTTTGAGGTAAATACG
CAAACTATTTTACAGttggcgctctctaattcgacgttctactattcgat
gcactctattattcgataatattgaaattccCTGTCGACAAAAAACTCTA
CTATTCGCTACGCTCCCTTTTTCGATGAAAATCAGATTTCCCCTGAAAAT
CGAATAAGACAGCGTCAACTTTACTACGCTTTTTTTTGGTTGGACTGGTT
GCATAAttgaatataacttttatgaCAATGGAAGAGGATTCGACTTATTC
CTTCAATAGATGATACTTTCGTCTGTTAGGTTGATAGTAAACGCAGGAAA
GTATAATATGCGCAAAGTTTACAGCAATCACAGCGGTTTAGTATAGTATA
GTTTGGGACACTGTAAGCCCCTCCGCCACTGGTAACTCCGCCCTGGGCTT
Aactctgttttcaaatttatcccgcctcctaattttatttcctttttgtg
TGTCATCCACTAAGAAAGTGACtcgattttcttttcttttacccTCTTTT
CTTGCCAGGTTGACGGAAGTTATGAtatcaatttgctttcttaTTCGTCA
CCCGCAACTACTCATTCTTGACTGAAAGAATTAATGAGATGGAGGAAAGT
CGATAAATGGCAAAATGTGCAAATAATATGAATCCACGTCAAATTAAAGG
AATACAGATCTTTAAGGGCTAAAgcttttcttcgaattaaagaaagatga
GAAagacagagtagctctatctagtgttagTGGTTAGAATATCTTCATGT
TAGGGTGAGTGCAAAATACAATTCAATTCGTCTCGTTTTAACGCGAAATT
CTAACGCTATTTTTACTGTAGTTTTTTATTGTAACATTTTTCAAGCTTAG
AGAAGCTGGGATTTCTTCTCAGAATTAGCAATCTATAACatatttaaaaa
tgaaacaaatgcaTGTTTTCCTTCGTTTAATTCTCGTCTTTGTAGGCGGC
GGATATAGGCGGATATAGGCCACCAGACCCGAGTGGAATAAGTTAGTATG
AGTTGATTATCTAGGGAATGTTTTGatgaaaagattttgaaaattaggga
TCCACTCATGTTTGAAAATCAACCCATAACTATTCTTGGGATCAAAACTA
TCATCAgaataatagcgagtttatgtataggaggatatcgagggcaaCTG
TAAGTGAAGTCGACGCAAAataaagtcgatagttgatgtacgatTATATA
TTGCCTTCGCTCACCTAagcagacgacggtattttggtgtttttatcgtc
ttcgagcaaagtggacggcgattttGGCTACATGTCAACGTTGATTTATA
CCGTGTCCTTCAATTTATCCCGAATACATGAACTCGCTAATAGTATttat
atatacaaaaatattCGGTATGTGTTATATTTATTTGTACATAGGTATCA
AAGTATGAATTTTTAATCTACATAGATTTTACGTCTTTTTTATTTGTACA
TAACGACAACAGAGTTTCACTTTGGTTAATGTACAGAACACTTTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001311XLOC_001311Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002454-exon-sc0000020-1491911889:645045..645239TCONS_00002454-exon-sc0000020-1491911889:645045..645239Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1510915933:645045..645239TCONS_00002454-exon-sc0000020-1510915933:645045..645239Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1575043694:645045..645239TCONS_00002454-exon-sc0000020-1575043694:645045..645239Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1491911889:653159..653225TCONS_00002454-exon-sc0000020-1491911889:653159..653225Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1510915933:653159..653225TCONS_00002454-exon-sc0000020-1510915933:653159..653225Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1575043694:653159..653225TCONS_00002454-exon-sc0000020-1575043694:653159..653225Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1491911889:653630..653727TCONS_00002454-exon-sc0000020-1491911889:653630..653727Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1510915933:653630..653727TCONS_00002454-exon-sc0000020-1510915933:653630..653727Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1575043694:653630..653727TCONS_00002454-exon-sc0000020-1575043694:653630..653727Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1491911889:655281..655409TCONS_00002454-exon-sc0000020-1491911889:655281..655409Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1510915933:655281..655409TCONS_00002454-exon-sc0000020-1510915933:655281..655409Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1575043694:655281..655409TCONS_00002454-exon-sc0000020-1575043694:655281..655409Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1491911889:655773..655823TCONS_00002454-exon-sc0000020-1491911889:655773..655823Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1510915933:655773..655823TCONS_00002454-exon-sc0000020-1510915933:655773..655823Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1575043694:655773..655823TCONS_00002454-exon-sc0000020-1575043694:655773..655823Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1491911889:656081..656185TCONS_00002454-exon-sc0000020-1491911889:656081..656185Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1510915933:656081..656185TCONS_00002454-exon-sc0000020-1510915933:656081..656185Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1575043694:656081..656185TCONS_00002454-exon-sc0000020-1575043694:656081..656185Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1491911889:656703..657692TCONS_00002454-exon-sc0000020-1491911889:656703..657692Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1510915933:656703..657692TCONS_00002454-exon-sc0000020-1510915933:656703..657692Clytia hemisphaericaexon
TCONS_00002454-exon-sc0000020-1575043694:656703..657692TCONS_00002454-exon-sc0000020-1575043694:656703..657692Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:645045..657692 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.23931	3.32998	3.79642	2.62902	5.46303	2.46983	3.39686	4.79748	4.36617	3.7223	1.91586	2.90593	2.3963	2.31588	0	0.796325	0.92748	0.378225	0.341843	0.261892	0.834186	0.239622	0.848752	1.07387	8.94307	4.49892	0	0	0.865844	0.95491
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002454 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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