TCONS_00002450 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002450
Unique NameTCONS_00002450
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1798

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002450 ID=TCONS_00002450|Name=TCONS_00002450|organism=Clytia hemisphaerica|type=transcript|length=1798bp
CTAGGTCTGGTTCAGTTTTTTTCCAgtctgaaaatgaagaaagataCACC
CAGAAGACAAACCAGAGCCTCTTCAAGGCTAAAAGAAAAACACGTAGAAA
CAATAGAAGaagaGAGCTTTGTAGAAGACCAACAAAACACAACTTTggta
aagaaatcaaaatcaaagaaagattCAGTCGAAGATTTCCCAAAAGctAT
AGATAAAGTTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTA
CGAAAAAGAGGAAGAccaaaaaagacaaagaaaaatcactTGAGATAACA
GAGATTGATGAAACACAAGAAGATGCAGAAAAGGAAACACAGGATTCTCC
AACAAAAAAGAGgaagaacaaaaaaaacaaagaaaatgtaacTGAGGCTG
AAGAAATGAATGATACAGGAAAGAATATCAATGAATCACCAGTGAAAAAG
AGCAGGAAAACcagaaaagcaaaagaaaaatcaCCGGAGTTTGTTCAAGA
TGATGATATTCAAGAAGATACATTAGaaaagTCACCAGTGAAAAAAGGCA
agaaaggaagaaaaacaaaagagaaatCACTTGAGTTTGTTGAAGATGAC
AAACCAGACGAACATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAA
AAAGAGCCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAA
CAAGTGAAGACATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtg
aagaagaagaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGA
GATCACTGAGGATGATGCCAATGACAAAGAAatagAGGATGAACCAATAG
AAACTAAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAA
GCTCCCGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAAT
TCAACAAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaAAAAC
AAGTGGTCCAAGATCGCCAAAAGAAAAATCGTCAACAGCAAGAAAAGTCT
AAGAAGAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAA
ATTAGTACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGG
ATATAGATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAA
ACACAacctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGG
TTTTGATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAG
GTTTACAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTC
AAAGGCNGACTTAGAATCAGGTTTACAAGCACCAATAACAGCACAGCATT
TGTATTCCGTCAGGGTCAAAGATATTGGTACTGATGCAAGAGAGTTTCTA
CAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGAGATTAAAATc
caatttcaaacaaaaagttGGGTCGAAAAAGTCTAAACAAATTGGTAAAA
GGAAAAAGATTATATGATgtagttttttttgtaaatgtttttatagtttt
ataacattgattattttattttactaaCTTTATACATTTATAACCTAAAT
GTGCAATTGATTTTATAAGAGGCTAAATATATCACAAAAGTTTGCTCCGG
GATCgtgtcaaaattaaaaagtatttAAAGTAAGatctgagaaaattttt
tccctATTGTATTATGGGAGAATTGGAAAAGTTTGTACATCTCTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000020:481860..492283+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002450 ID=TCONS_00002450|Name=TCONS_00002450|organism=Clytia hemisphaerica|type=transcript|length=10424bp|location=Sequence derived from alignment at sc0000020:481860..492283+ (Clytia hemisphaerica)
CTAGGTCTGGTTCAGTTTTTTTCCAgtctgaaaatgaagaaagataCACC
CAGAAGACAAACCAGAGCCTCTTCAAGGCTAAAAGAAAAACACGTAGAAA
CAATAGAAGGTGAGCCATTGAAAtagatttctttgattttttctccaaaa
caCTATATATCTGAACTAATGTTACAAATGCTAATTGGCATACCTTATCC
GGGAAAAATGTTAGGGaaagtgtcaaaatttttcatGGGTGTCAGTATTT
TACTTGTCTAAAAACCTGAGGTTCCAtcatttgaaaaagccttgcTCGGA
TTATTTATCACTGGTCCCTGGATCACTTTTACCTGATTTCTTATTATTGT
CAATTTCTGGTTTCTCTTgggtaaaaaaatcatttttgatccCTTGCATT
AAtgcatttaaaaatgattttaaaatgatatttttttgtgatactttttc
ttttttagaagaGAGCTTTGTAGAAGACCAACAAAACACAACTTTggtaa
agaaatcaaaatcaaagaaagattCAGTCGAAGATTTCCCAAAAGGTAAT
AAAATAATCGATTGGTTTCAAAACTCTTTTTATGGTTTTTTAGAATTATT
AAATCAGcaaaatcagtttttaactCTCACCAATATTTGAGAGATATGAC
TTCATTTGGAGCTTTAAAAAAGAGTTTTTCAAAGTagctcatttttttct
ttccataaATATGTTTGAatgtagcctggagatccatgctatgattacTT
CTTTTATATAAAGATGGAGAAATGAATTGCATGGTTTNATCCATGCTATG
ATTACTTCTTTTATATAAAGATGGAGAAATGAATTGCATGGTTTGGGCTA
TGAGTTTGAATTTTCCAGCTCCAAAAGGACCAGTTGAAAACACAGCTAAT
CAAATCTTGTTACTATTTACTATTCTTTTAAGTTGCtttaattttagtaa
gtgaggaaaGCGCTAAATTCCAAGATTTCTTAGATTCGTCCTCACAGCCT
GAACCCATCATGTATACATAAATACAGGACAGGTCTCCTGTGTCTAGTTT
GAATAATACTTCTAAATAAAACAGCACTGAATGTTCTATGTCAAAATTAA
CTTGCTTACATTTTCTGACCGTTCAGATGAAAttctgtagaaaaaaaact
ttcattttagTTAATAGAATGAAAGAGAAATCCTTTGATTTCACTATGTG
AATCAACACTTGTACTCATTTTTAATCATTCAGCCAATGTGTTATCTGAA
TTGTTTtcgtagaaaaaatctttatctcGTCAGATCTCGTTGTGTatcaa
aattaccaaaataaattgaaaaatatcttatcGTAGCCCATTATTGCTCT
GTGTACTGTATGATTAAATGAAatatatgatctcttttaagctATAGATA
AAGTTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTACGAAA
AAGAGGAAGAccaaaaaagacaaagaaaaatcactTGAGATAACAGAGAT
TGATGAAACACAAGAAGATGCAGGTAATTTTGATTATTGTTCTTCATCAG
ATCTATTGTCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAAAGACTGGG
TTAGTTTACAATGCAGGATTGAAATCAAATGTTTGAAGTTGTTGCATTTA
TTTTCGCATTAAAACATAATTTTGACATGGTTCCTTgccaataaaaattt
gaatgaaagaaAAATCCATTGATTTCACTATGTGAATCAACACTTCCACT
AATTTTTAATCAATCAGCCAATGTGTTATCTGaattgttttcttaaaaaa
atctttatctcGTTGTGTATTATAATGaccaaaataaattgaaaaatatc
ttatcGTAGCCCATTATTGCTCTGTGTATCGTAAGATTAAATGAAatata
tgatctcttttaagctATAGATAAAGTTGGAGGTACCCAACAAGAAGCAC
AAATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaagaa
aaatcactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGGTAA
TTTTGATTATTGTTCTTCATCAGATCTATTGTCTCTTTTTTATTATGCCC
CTTTAAAGTGTGAAAAGACTGGGTTAGTTTACAATGCAGGATTGAAATCA
AATGTTTGAAGTTGTTGCATTTATTTTCGCATTAAAACATAATTTTGACA
TGGTTCCTTgccaataaaaatttgaatgaaagaaAAATCCATTGATTTCA
CTATGTGAATCAACACTTCCACTAATTTTTAATCAATCAGCCAATGTGTT
ATCTGaattgttttcttaaaaaaatctttatctcGTTGTGTATTATAATG
accaaaataaattgaaaaatatcttatcGTAGCCCATTATTGCTCTGTGT
ATCGTAAGATTAAATGAAatatatgatctcttttaagctATAGATAAAGT
TGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAGA
GGAAGAccaaaaaagacaaagaaaaatcactTGAGATAACAGAGATTGAT
GAAACACAAGAAGATGCAGGTAATTTTGATTATTGTTCTTCATCAGATCT
ATTGTCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAAAGACTGGGTTAG
TTTACAATGCAGGATTGAAATCAAATGTTTGAAGTTGTTGCATTTATTTT
CGCATTAAAACATAATTTTGACATGGTTCCTTgccaataaaaatttgaat
gaaagaaAAATCCATTGATTTCACTATGTGAATCAACACTTCCACTAATT
TTTAATCAATCAGCCAATGTGTTATCTGaattgttttcttaaaaaaatct
ttatctcGTTGTGTATTATAATGaccaaaataaattgaaaaatatcttat
cGTAGCCCATTATTGCTCTGTGTATCGTAAGATTAAATGAAatatatgat
ctcttttaagctATAGATAAAGTTGGAGGTACCCAACAAGAAGCACAAAT
AGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaagaaaaat
cactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGGTAATTTT
GATTATTGTTCTTCATCAGATCTATTGTCTCTTTTTTATTATGCCCCTTT
AAAGTGTGAAAAGACTGGGATAGTTTACAATGTAGGATTGATATCAAATG
TTTAAAGGTGTTGCATTTATTTTCGCATTGAAACATAATTGTTCCTTTCT
AATAAAAACGCGACCAAATTCCTTCTTATTTTTCATTGTAATGAGTTATT
TAGTCAGAacaatgacaacaaagtttCTCAATACCCTGATAAAATTGTCA
TTGTTGCCTGATAATAATATTGTTCATTTAGAAAAGGAAACACAGGATTC
TCCAACAAAAAAGAGgaagaacaaaaaaaacaaagaaaatgtaacTGAGG
CTGAAGAAATGAATGATACAGGTAGAAAACTAGATTTGTCCATTGTTTTT
TGCTTTTGTTGCGCAAGGTCAACAGACCCAAAGCCTTTTCAAATTCAGAG
CAACTAAAATCACTCCCTAGTCAAGGTACCCTTAAATAAactaagttttt
ttcaaaacctgaaTAAAGGAGAACAAAGCTGGCAAAAAAGGTTAGGTGCT
TAGCCTGTATAAAGATAAAAGAATAAAGTGAATTTTTAAATGCCATTTTG
TCACTTCGAATTTTCGAATATTATTTAATTTCAACTAAGGAAAGGTTgtt
attctcatttttttaaACAGGATAGCACTGGACTTGGCAGCCCTAGGTCC
TAACTTACCAGTACAGAACTGTAACAAAATCTCGCGTGGTACCACTTTAG
ACTCTATTTCTTTTAACCAGGAAAGAATATCAATGAATCACCAGTGAAAA
AGAGCAGGAAAACcagaaaagcaaaagaaaaatcaCCGGAGTTTGTTCAA
GATGATGATATTCAAGAAGATACATTAGGTATGGGgctgtccacatagta
cgtacgcactaaagggggaggggggtcttctcaaaagtgTATGAAAAGCG
AGTTAAAGAAAAATGTATGTACGCattgtaaagaaaaatttttgtttttt
tgtcgacttttacacTTCTTATCTgttcttatacgcatcaaggaatagaa
aaagtttcttaataaacaacaagtttcatgtatgaaatgaAGATCcaaac
caaacgatttgaatttaaaattttcttcaaccgaggggggcGGGGGGGGA
GTTATGAAAAAGTACGTTTTTTACcaggggtatagccatttgcgtacaaG
GGGTACCCCCtgtactcgattttcgacattttagtgcgtacatACAATGT
GGAAGGCCCCTATGCAATATTTAATAAGATCCTTATCCAAAGAATCTGAC
TGTAACTATTTTCTGTTGTATGGCTGGCAACGGATCAAGTTAACACCTGC
CAAGTAAAATTCAAAACTGCGTAAGGCCTACCCTCTTcgtttgtctgtta
ccagcttttttttggtattggttctttgttagtttttttgtacaaagata
tggaaaaatTGGTAATAACTGAgctccattttcaaaaaaaagttttttgc
ttgccaaaaaatgtcaaaatatgcGGAAGTTcgttattttagattttcaa
agatttttttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNACTTTTACACTTCTTATCTgttcttatacg
catcaaggaatagaaaaagtttcttaataaacaacaagtttcatgtatga
aatgaAGATCcaaaccaaacgatttgaatttaaaattttcttcaaccgag
ggggggggggggggagttaTGAAAAAGTACGTTTTTTACcaggggtatag
ccatttgcgtacaaGGGGTACCCCCtgtactcgattttcgacattttagt
gcgtacatACAATGTGGAAGGCCCCTATGCAATATTTAATAAGATCCTTA
TCCAAAGAATCTGACTGTAACTATTTTCTGTTGTATGGCTGGCAACGGAT
CAAGTTAACACCTGCCAAGTAAAATTCAAAACTGCGTAAGGCCTACCCTC
TGcgtttgtctgttaccagcttttttttggtattggttctttgttagttt
ttttgcacaaagatatggaaaaatTGGTAATAACTGAgctccattttcaa
aaaaaagttttttgcttgccaaaaaatgtcaaaatatgcGGAAGTTcgtt
attttagattttcaaagatttttttttaatcaattctACCATCCTAGAAA
TTGGAGGGAGCAGCCAATTGTCGCCACTATAATGATTTTTCTTGATATTC
TCTGTACTCATTGAATTTACCGATTTTTTCTTCCTTAATCTTCATTTAGC
ATGgtttaattttcataaaaaaattattttcaatcacTTGATGtacagcc
agtaaaatttatTTGAGCCTTCTTTCTCCTTTTTCTCTTCGTCTTTTTGA
CATCAGGTcttcatcaggtaggtccaatcaaCATCCAtccattattatta
ttttcagaagaaaagTCACCAGTGAAAAAAGGCAagaaaggaagaaaaac
aaaagagaaatCACTTGAGTTTGTTGAAGATGACAAACCAGACGAACATA
CAGGTATAAGCATGACATATTGTGCACTGAAAAAGCAGCAATTATAATAG
CATGCCATATTTCGGAAAGGATTAAATTAGGACTGTCATTTTttcttctg
ttattttattCTGTTGTCAactcagcgttttgattggtcgagagcatcga
gatatttgtgatatttaaaatatttcacatGTGGAAAATATGACTACGTT
GACTTTCGGGGGCTGCGTGAGCGgtgggagaaaaatcaaaacaaaacagc
cgaaaagaactgactaaagaaaaaataaagatcagCAAAAAGATTATTTG
CAGATTAATTTTTTACTTTGGATTTCTTCCATTAGAGACactaaaatggg
ggggggggtttgtaggggttcgaaataccgttttcccgtcaaaatttttg
ctgaatcccggaatcccgaaaattgaaaaaataataacaccgtcacacca
gCTTGTACAGGGaaaaaatgtacctaaataccgtcagcttctgattttaa
aataccgttttcccgtctcttttttcgtcaaatcccgtataataccgtac
taaaaaagggccaatcccgtcacaccgtaaaagtacaaacccccctctaa
aatcaaatctaatgaaatgtaaaagtaaaaaattaaataaaagtagaatt
tcatctaaaaaatctcctaaaaagacagcaaaaatttagatttttgaaat
ttcagggtcggtcgggcccatAAAACAAACTAATTAAATTGGTCTTGCCT
AATAATACTTTCATTTAATATTATTTAAGAGCCACAAATTACAGAAGAAT
CGTCAGTGAAAAAGAGCCGGAACAAtaaaaacagtaaagaaaaaaaatca
gatgCTGTAACAAGTGAAGACATAGCAGGTAAAGCACTGTTCTTTGTAAT
ACTTCTTTATAATGGCTTTGTTGTCAGTCAACATAGATTCGACATGGAAG
TGTGAGGGTATGCAGTCTAATATCAAAGAAACGAAAATGGAACATAATCT
ACATACAAAAGATTTTCTACTAAACTATAGGTTATCTGTTACGCTCCTCT
TGACATACCAAAAATTATGTTCACAATTTAACTCTTTTTAGAAGAAGAGC
TACAAATAAAGGAATCCCctgtgaagaagaagaaaaggaaatcACCTAGA
CAGGACAAAGAACAAATATCAGAGATCACTGAGGATGATGCCAATGACAA
AGAAataggttttgtttttttatatttataaaaggGTTTAGGTTTAATTT
CACTATCGGAATCAGAAGACGACCTATGATGGTCTCATCTTCTTAAATTC
CTCCTTAAGATAGAGGGGACTTGAACGATGTTGATTAGAATTACCCTATA
AGAATAGATGTCAAAGATGGGTTAAAGGGaaattaaagtagtaaaatgta
aacattgcgcgaaccacgtgtcattaaagagaacaattgagatcacgtgt
ccaaaacaaacttgtaagacaattgaacaatcaaaataattagccatatt
tggtttgattttgtatccgctgcatacagtttgtttacaaatttcgcaag
tactgttatgtccctttaatatgGTGAAGGTTTTGCCAGTGATATGGTGT
CTTTTTTCAATCTCCGATTGGGTCATTAAATCATCaagtttcgatatttt
tataagaaaggttATTCACTCGCAAGGGGACGGGTGTAGTTTAAAATTTA
TTGTACAAAAAAGTTAATCCTACCATGGTCTTTTTTGATTCGATCGATAT
TGATCAAAACGAACCAGGGAGaaagagtaaaaaaaactttcaaaaaacct
AAAGAAACATCGCCTGGAATTTATGAAGCTGAACAATCAAATGCTATtga
atttgattgattgatatgaATATTAATTTTTAGCTTCAGTTGAACTATAT
AAGGGAACAAAATTATGCGGAATGAAAATTTGGTGGAAATAccaccaaaa
ttaaattcccgccaaatttaaaatatttttttcccgaATGAGTATTATTt
cagtctttaaaaaaaacgttctttctcatttaaaaaaaaagcgcCAAAAA
TATCCTTCATCTGCCAAAGGAAATTCCCAACGAAAATAATGTTTTCGGCC
ATccaacaaattaaattcctgctcAAATTTCTTCCTTGAGTTAGAATCTA
AAAGTGACAGTTTCTAATGACTAATATGGTTTGCCATTACATTATTCTTT
AACTCTTTCAGAGGATGAACCAATAGAAACTAAAGTTGAATTGAATAATT
CACCACCAACAGACTCTGAAGATGAAGCTCCCGAGGGGATTTCTTTAAAA
GACAGTCGTAAGAAAGCTATACAAATTCAACAAGACATCTCTGAtgctaa
aaaattgaaaaaatcacatcaAAAACAAGTGGTCCAAGATCGCCAAAAGA
AAAATCGTCAACAGCAAGAAAAGTCTAAGAAGAAAAGCCATCAGTTACCG
GATAAGATTTCAGAGGATGTTTTGAAATTAGTACAGCAAGAGGCTGAAGA
GGAGCAAAATTCAGATTCTGAAATGGATATAGATGAACTGTTAAACCAAA
TAGGTCAAGAGAAACCTGCATTTAAAACACAacctaaaaatcagaaaatt
actTTTGAAGATGACGATGATCCTGGTTTTGATGAACAATTTCTTGATGA
AGAGAGTGAGGATGACTTAGAATCAGGTTTACAAGCACCAATAACAGCAC
AGCATTTGTATTCCGTAGATAAGGTCAAAGGCNGACTTAGAATCAGGTTT
ACAAGCACCAATAACAGCACAGCATTTGTATTCCGTCAGGGTCAAAGATA
TTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAGA
CTCAAACGAGAAAAGAGATTAAAATccaatttcaaacaaaaagttGGGTC
GAAAAAGTCTAAACAAATTGGTAAAAGGAAAAAGATTATATGATgtagtt
ttttttgtaaatgtttttatagttttataacattgattattttattttac
taaCTTTATACATTTATAACCTAAATGTGCAATTGATTTTATAAGAGGCT
AAATATATCACAAAAGTTTGCTCCGGGATCgtgtcaaaattaaaaagtat
ttAAAGTAAGatctgagaaaattttttccctATTGTATTATGGGAGAATT
GGAAAAGTTTGTACATCTCTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001309XLOC_001309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002450-exon-sc0000020-1491911889:481860..481968TCONS_00002450-exon-sc0000020-1491911889:481860..481968Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:481860..481968TCONS_00002450-exon-sc0000020-1510915933:481860..481968Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:481860..481968TCONS_00002450-exon-sc0000020-1575043694:481860..481968Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1491911889:482318..482404TCONS_00002450-exon-sc0000020-1491911889:482318..482404Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:482318..482404TCONS_00002450-exon-sc0000020-1510915933:482318..482404Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:482318..482404TCONS_00002450-exon-sc0000020-1575043694:482318..482404Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1491911889:484297..484428TCONS_00002450-exon-sc0000020-1491911889:484297..484428Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:484297..484428TCONS_00002450-exon-sc0000020-1510915933:484297..484428Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:484297..484428TCONS_00002450-exon-sc0000020-1575043694:484297..484428Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1491911889:485241..485330TCONS_00002450-exon-sc0000020-1491911889:485241..485330Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:485241..485330TCONS_00002450-exon-sc0000020-1510915933:485241..485330Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:485241..485330TCONS_00002450-exon-sc0000020-1575043694:485241..485330Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1491911889:485730..485837TCONS_00002450-exon-sc0000020-1491911889:485730..485837Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:485730..485837TCONS_00002450-exon-sc0000020-1510915933:485730..485837Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:485730..485837TCONS_00002450-exon-sc0000020-1575043694:485730..485837Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1491911889:489020..489112TCONS_00002450-exon-sc0000020-1491911889:489020..489112Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:489020..489112TCONS_00002450-exon-sc0000020-1510915933:489020..489112Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:489020..489112TCONS_00002450-exon-sc0000020-1575043694:489020..489112Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1491911889:489889..489987TCONS_00002450-exon-sc0000020-1491911889:489889..489987Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:489889..489987TCONS_00002450-exon-sc0000020-1510915933:489889..489987Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:489889..489987TCONS_00002450-exon-sc0000020-1575043694:489889..489987Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1491911889:490201..490317TCONS_00002450-exon-sc0000020-1491911889:490201..490317Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:490201..490317TCONS_00002450-exon-sc0000020-1510915933:490201..490317Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:490201..490317TCONS_00002450-exon-sc0000020-1575043694:490201..490317Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1491911889:491321..492283TCONS_00002450-exon-sc0000020-1491911889:491321..492283Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1510915933:491321..492283TCONS_00002450-exon-sc0000020-1510915933:491321..492283Clytia hemisphaericaexon
TCONS_00002450-exon-sc0000020-1575043694:491321..492283TCONS_00002450-exon-sc0000020-1575043694:491321..492283Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:481860..492283 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.5353	12.3293	0.201628	2.28526	25.7545	20.2612	15.344	12.044	8.5096	6.68657	5.52063	6.14155	10.1788	9.59801	8.54464	7.5552	8.58817	7.97362	1.96769	3.24581	4.90637	4.71913	15.7392	9.56848	7.64692	10.83	3.45675	1.48453	10.0463	8.92247
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002450 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top