TCONS_00002440 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002440
Unique NameTCONS_00002440
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1807

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002440 ID=TCONS_00002440|Name=TCONS_00002440|organism=Clytia hemisphaerica|type=transcript|length=1807bp
AAACAGGCCTTCCTCAATCTAAATAGATAGATCGCACACCTAAATAAAAG
ACTCATAAAAATTAATAGGATTATAAAGTCTGGTTCAGTTTTTTTCCAgt
ctgaaaatgaagaaagataCACCCAGAAGACAAACCAGAGCCTCTTCAAG
GCTAAAAGAAAAACACGTAGAAACAATAGAAGaagaGAGCTTTGTAGAAG
ACCAACAAAACACAACTTTggtaaagaaatcaaaatcaaagaaagattCA
GTCGAAGATTTCCCAAAAGctATAGATAAAGTTGGAGGTACCCAACAAGA
AGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagaca
aagaaaaatcactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCA
GAAAAGGAAACACAGGATTCTCCAACAAAAAAGAGgaagaacaaaaaaaa
caaagaaaatgtaacTGAGGCTGAAGAAATGAATGATACAGGAAAGAATA
TCAATGAATCACCAGTGAAAAAGAGCAGGAAAACcagaaaagcaaaagaa
aaatcaCCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATACATTAGa
agaaaagTCACCAGTGAAAAAAGGCAagaaaggaagaaaaacaaaagaga
aatCACTTGAGTTTGTTGAAGATGACAAACCAGACGAACATACAGAGCCA
CAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaaacag
taaagaaaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGAAGAAG
AGCTACAAATAAAGGAATCCCctgtgaagaagaagaaaaggaaatcACCT
AGACAGGACAAAGAACAAATATCAGAGATCACTGAGGATGATGCCAATGA
CAAAGAAatagAGGATGAACCAATAGAAACTAAAGTTGAATTGAATAATT
CACCACCAACAGACTCTGAAGATGAAGCTCCCGAGGGGATTTCTTTAAAA
GACAGTCGTAAGAAAGCTATACAAATTCAACAAGACATCTCTGAtgctaa
aaaattgaaaaaatcacatcaAAAACAAGTGGTCCAAGATCGCCAAAAGA
AAAATCGTCAACAGCAAGAAAAGTCTAAGAAGAAAAGCCATCAGTTACCG
GATAAGATTTCAGAGGATGTTTTGAAATTAGTACAGCAAGAGGCTGAAGA
GGAGCAAAATTCAGATTCTGAAATGGATATAGATGAACTGTTAAACCAAA
TAGGTCAAGAGAAACCTGCATTTAAAACACAacctaaaaatcagaaaatt
actTTTGAAGATGACGATGATCCTGGTTTTGATGAACAATTTCTTGATGA
AGAGAGTGAGGATGACTTAGAATCAGGTTTACAAGCACCAATAACAGCAC
AGCATTTGTATTCCGTAGATAAGGTCAAAGATATTGGTACTGATGCAAGA
GAGTTTCTACAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGAG
ATTAAAATccaatttcaaacaaaaagttGGGTCGAAAAAGTCTAAACAAA
TTGGTAAAAGGAAAAAGATTATATGATgtagttttttttgtaaatgtttt
tatagttttataacattgattattttattttactaaCTTTATACATTTAT
AACCTAAATGTGCAATTGATTTTATAAGAGGCTAAATATATCACAAAAGT
TTGCTCCGGGATCgtgtcaaaattaaaaagtatttAAAGTAAGatctgag
aaaattttttccctATTGTATTATGGGAGAATTGGAAAAGTTTGTACATC
TCTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000020:481486..492283+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002440 ID=TCONS_00002440|Name=TCONS_00002440|organism=Clytia hemisphaerica|type=transcript|length=10798bp|location=Sequence derived from alignment at sc0000020:481486..492283+ (Clytia hemisphaerica)
AAACAGGCCTTCCTCAATCTAAATAGATAGATCGCACACCTAAATAAAAG
ACTCATAAAAATTAATAGGATTATAAAGTATGTGTTGTACATTATGCATT
ACTTAAATTTCTCTGAATGACCAATATACAGCGATAGGTCCCTTTTGAAT
TAAAGGATCCCAGGACTTAGGCCACTTTTGAATTAGGGTAGCAAAATGTA
TTCTTAAACTTTTTCAATTGAAAagagtattttaatttttgtttttctga
aaTGGAGGTTTTTTACTCTTCTTCTTAGTTTATATTTCTCACCATTCACT
TCTGTCAGCTTCTGTTACTAAGTTACAAATTGTTGGTTATTTGTTGTCCA
TTTTTTTTCCTCACGGTTATTTACCTAGGTCTGGTTCAGTTTTTTTCCAg
tctgaaaatgaagaaagataCACCCAGAAGACAAACCAGAGCCTCTTCAA
GGCTAAAAGAAAAACACGTAGAAACAATAGAAGGTGAGCCATTGAAAtag
atttctttgattttttctccaaaacaCTATATATCTGAACTAATGTTACA
AATGCTAATTGGCATACCTTATCCGGGAAAAATGTTAGGGaaagtgtcaa
aatttttcatGGGTGTCAGTATTTTACTTGTCTAAAAACCTGAGGTTCCA
tcatttgaaaaagccttgcTCGGATTATTTATCACTGGTCCCTGGATCAC
TTTTACCTGATTTCTTATTATTGTCAATTTCTGGTTTCTCTTgggtaaaa
aaatcatttttgatccCTTGCATTAAtgcatttaaaaatgattttaaaat
gatatttttttgtgatactttttcttttttagaagaGAGCTTTGTAGAAG
ACCAACAAAACACAACTTTggtaaagaaatcaaaatcaaagaaagattCA
GTCGAAGATTTCCCAAAAGGTAATAAAATAATCGATTGGTTTCAAAACTC
TTTTTATGGTTTTTTAGAATTATTAAATCAGcaaaatcagtttttaactC
TCACCAATATTTGAGAGATATGACTTCATTTGGAGCTTTAAAAAAGAGTT
TTTCAAAGTagctcatttttttctttccataaATATGTTTGAatgtagcc
tggagatccatgctatgattacTTCTTTTATATAAAGATGGAGAAATGAA
TTGCATGGTTTNATCCATGCTATGATTACTTCTTTTATATAAAGATGGAG
AAATGAATTGCATGGTTTGGGCTATGAGTTTGAATTTTCCAGCTCCAAAA
GGACCAGTTGAAAACACAGCTAATCAAATCTTGTTACTATTTACTATTCT
TTTAAGTTGCtttaattttagtaagtgaggaaaGCGCTAAATTCCAAGAT
TTCTTAGATTCGTCCTCACAGCCTGAACCCATCATGTATACATAAATACA
GGACAGGTCTCCTGTGTCTAGTTTGAATAATACTTCTAAATAAAACAGCA
CTGAATGTTCTATGTCAAAATTAACTTGCTTACATTTTCTGACCGTTCAG
ATGAAAttctgtagaaaaaaaactttcattttagTTAATAGAATGAAAGA
GAAATCCTTTGATTTCACTATGTGAATCAACACTTGTACTCATTTTTAAT
CATTCAGCCAATGTGTTATCTGAATTGTTTtcgtagaaaaaatctttatc
tcGTCAGATCTCGTTGTGTatcaaaattaccaaaataaattgaaaaatat
cttatcGTAGCCCATTATTGCTCTGTGTACTGTATGATTAAATGAAatat
atgatctcttttaagctATAGATAAAGTTGGAGGTACCCAACAAGAAGCA
CAAATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaaga
aaaatcactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGGTA
ATTTTGATTATTGTTCTTCATCAGATCTATTGTCTCTTTTTTATTATGCC
CCTTTAAAGTGTGAAAAGACTGGGTTAGTTTACAATGCAGGATTGAAATC
AAATGTTTGAAGTTGTTGCATTTATTTTCGCATTAAAACATAATTTTGAC
ATGGTTCCTTgccaataaaaatttgaatgaaagaaAAATCCATTGATTTC
ACTATGTGAATCAACACTTCCACTAATTTTTAATCAATCAGCCAATGTGT
TATCTGaattgttttcttaaaaaaatctttatctcGTTGTGTATTATAAT
GaccaaaataaattgaaaaatatcttatcGTAGCCCATTATTGCTCTGTG
TATCGTAAGATTAAATGAAatatatgatctcttttaagctATAGATAAAG
TTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAG
AGGAAGAccaaaaaagacaaagaaaaatcactTGAGATAACAGAGATTGA
TGAAACACAAGAAGATGCAGGTAATTTTGATTATTGTTCTTCATCAGATC
TATTGTCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAAAGACTGGGTTA
GTTTACAATGCAGGATTGAAATCAAATGTTTGAAGTTGTTGCATTTATTT
TCGCATTAAAACATAATTTTGACATGGTTCCTTgccaataaaaatttgaa
tgaaagaaAAATCCATTGATTTCACTATGTGAATCAACACTTCCACTAAT
TTTTAATCAATCAGCCAATGTGTTATCTGaattgttttcttaaaaaaatc
tttatctcGTTGTGTATTATAATGaccaaaataaattgaaaaatatctta
tcGTAGCCCATTATTGCTCTGTGTATCGTAAGATTAAATGAAatatatga
tctcttttaagctATAGATAAAGTTGGAGGTACCCAACAAGAAGCACAAA
TAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaagaaaaa
tcactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGGTAATTT
TGATTATTGTTCTTCATCAGATCTATTGTCTCTTTTTTATTATGCCCCTT
TAAAGTGTGAAAAGACTGGGTTAGTTTACAATGCAGGATTGAAATCAAAT
GTTTGAAGTTGTTGCATTTATTTTCGCATTAAAACATAATTTTGACATGG
TTCCTTgccaataaaaatttgaatgaaagaaAAATCCATTGATTTCACTA
TGTGAATCAACACTTCCACTAATTTTTAATCAATCAGCCAATGTGTTATC
TGaattgttttcttaaaaaaatctttatctcGTTGTGTATTATAATGacc
aaaataaattgaaaaatatcttatcGTAGCCCATTATTGCTCTGTGTATC
GTAAGATTAAATGAAatatatgatctcttttaagctATAGATAAAGTTGG
AGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGA
AGAccaaaaaagacaaagaaaaatcactTGAGATAACAGAGATTGATGAA
ACACAAGAAGATGCAGGTAATTTTGATTATTGTTCTTCATCAGATCTATT
GTCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAAAGACTGGGATAGTTT
ACAATGTAGGATTGATATCAAATGTTTAAAGGTGTTGCATTTATTTTCGC
ATTGAAACATAATTGTTCCTTTCTAATAAAAACGCGACCAAATTCCTTCT
TATTTTTCATTGTAATGAGTTATTTAGTCAGAacaatgacaacaaagttt
CTCAATACCCTGATAAAATTGTCATTGTTGCCTGATAATAATATTGTTCA
TTTAGAAAAGGAAACACAGGATTCTCCAACAAAAAAGAGgaagaacaaaa
aaaacaaagaaaatgtaacTGAGGCTGAAGAAATGAATGATACAGGTAGA
AAACTAGATTTGTCCATTGTTTTTTGCTTTTGTTGCGCAAGGTCAACAGA
CCCAAAGCCTTTTCAAATTCAGAGCAACTAAAATCACTCCCTAGTCAAGG
TACCCTTAAATAAactaagtttttttcaaaacctgaaTAAAGGAGAACAA
AGCTGGCAAAAAAGGTTAGGTGCTTAGCCTGTATAAAGATAAAAGAATAA
AGTGAATTTTTAAATGCCATTTTGTCACTTCGAATTTTCGAATATTATTT
AATTTCAACTAAGGAAAGGTTgttattctcatttttttaaACAGGATAGC
ACTGGACTTGGCAGCCCTAGGTCCTAACTTACCAGTACAGAACTGTAACA
AAATCTCGCGTGGTACCACTTTAGACTCTATTTCTTTTAACCAGGAAAGA
ATATCAATGAATCACCAGTGAAAAAGAGCAGGAAAACcagaaaagcaaaa
gaaaaatcaCCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATACATT
AGGTATGGGgctgtccacatagtacgtacgcactaaagggggaggggggt
cttctcaaaagtgTATGAAAAGCGAGTTAAAGAAAAATGTATGTACGCat
tgtaaagaaaaatttttgtttttttgtcgacttttacacTTCTTATCTgt
tcttatacgcatcaaggaatagaaaaagtttcttaataaacaacaagttt
catgtatgaaatgaAGATCcaaaccaaacgatttgaatttaaaattttct
tcaaccgaggggggcGGGGGGGGAGTTATGAAAAAGTACGTTTTTTACca
ggggtatagccatttgcgtacaaGGGGTACCCCCtgtactcgattttcga
cattttagtgcgtacatACAATGTGGAAGGCCCCTATGCAATATTTAATA
AGATCCTTATCCAAAGAATCTGACTGTAACTATTTTCTGTTGTATGGCTG
GCAACGGATCAAGTTAACACCTGCCAAGTAAAATTCAAAACTGCGTAAGG
CCTACCCTCTTcgtttgtctgttaccagcttttttttggtattggttctt
tgttagtttttttgtacaaagatatggaaaaatTGGTAATAACTGAgctc
cattttcaaaaaaaagttttttgcttgccaaaaaatgtcaaaatatgcGG
AAGTTcgttattttagattttcaaagatttttttttNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTT
ACACTTCTTATCTgttcttatacgcatcaaggaatagaaaaagtttctta
ataaacaacaagtttcatgtatgaaatgaAGATCcaaaccaaacgatttg
aatttaaaattttcttcaaccgagggggggggggggggagttaTGAAAAA
GTACGTTTTTTACcaggggtatagccatttgcgtacaaGGGGTACCCCCt
gtactcgattttcgacattttagtgcgtacatACAATGTGGAAGGCCCCT
ATGCAATATTTAATAAGATCCTTATCCAAAGAATCTGACTGTAACTATTT
TCTGTTGTATGGCTGGCAACGGATCAAGTTAACACCTGCCAAGTAAAATT
CAAAACTGCGTAAGGCCTACCCTCTGcgtttgtctgttaccagctttttt
ttggtattggttctttgttagtttttttgcacaaagatatggaaaaatTG
GTAATAACTGAgctccattttcaaaaaaaagttttttgcttgccaaaaaa
tgtcaaaatatgcGGAAGTTcgttattttagattttcaaagatttttttt
taatcaattctACCATCCTAGAAATTGGAGGGAGCAGCCAATTGTCGCCA
CTATAATGATTTTTCTTGATATTCTCTGTACTCATTGAATTTACCGATTT
TTTCTTCCTTAATCTTCATTTAGCATGgtttaattttcataaaaaaatta
ttttcaatcacTTGATGtacagccagtaaaatttatTTGAGCCTTCTTTC
TCCTTTTTCTCTTCGTCTTTTTGACATCAGGTcttcatcaggtaggtcca
atcaaCATCCAtccattattattattttcagaagaaaagTCACCAGTGAA
AAAAGGCAagaaaggaagaaaaacaaaagagaaatCACTTGAGTTTGTTG
AAGATGACAAACCAGACGAACATACAGGTATAAGCATGACATATTGTGCA
CTGAAAAAGCAGCAATTATAATAGCATGCCATATTTCGGAAAGGATTAAA
TTAGGACTGTCATTTTttcttctgttattttattCTGTTGTCAactcagc
gttttgattggtcgagagcatcgagatatttgtgatatttaaaatatttc
acatGTGGAAAATATGACTACGTTGACTTTCGGGGGCTGCGTGAGCGgtg
ggagaaaaatcaaaacaaaacagccgaaaagaactgactaaagaaaaaat
aaagatcagCAAAAAGATTATTTGCAGATTAATTTTTTACTTTGGATTTC
TTCCATTAGAGACactaaaatgggggggggggtttgtaggggttcgaaat
accgttttcccgtcaaaatttttgctgaatcccggaatcccgaaaattga
aaaaataataacaccgtcacaccagCTTGTACAGGGaaaaaatgtaccta
aataccgtcagcttctgattttaaaataccgttttcccgtctcttttttc
gtcaaatcccgtataataccgtactaaaaaagggccaatcccgtcacacc
gtaaaagtacaaacccccctctaaaatcaaatctaatgaaatgtaaaagt
aaaaaattaaataaaagtagaatttcatctaaaaaatctcctaaaaagac
agcaaaaatttagatttttgaaatttcagggtcggtcgggcccatAAAAC
AAACTAATTAAATTGGTCTTGCCTAATAATACTTTCATTTAATATTATTT
AAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAt
aaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGACATAGC
AGGTAAAGCACTGTTCTTTGTAATACTTCTTTATAATGGCTTTGTTGTCA
GTCAACATAGATTCGACATGGAAGTGTGAGGGTATGCAGTCTAATATCAA
AGAAACGAAAATGGAACATAATCTACATACAAAAGATTTTCTACTAAACT
ATAGGTTATCTGTTACGCTCCTCTTGACATACCAAAAATTATGTTCACAA
TTTAACTCTTTTTAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaag
aagaagaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGAT
CACTGAGGATGATGCCAATGACAAAGAAataggttttgtttttttatatt
tataaaaggGTTTAGGTTTAATTTCACTATCGGAATCAGAAGACGACCTA
TGATGGTCTCATCTTCTTAAATTCCTCCTTAAGATAGAGGGGACTTGAAC
GATGTTGATTAGAATTACCCTATAAGAATAGATGTCAAAGATGGGTTAAA
GGGaaattaaagtagtaaaatgtaaacattgcgcgaaccacgtgtcatta
aagagaacaattgagatcacgtgtccaaaacaaacttgtaagacaattga
acaatcaaaataattagccatatttggtttgattttgtatccgctgcata
cagtttgtttacaaatttcgcaagtactgttatgtccctttaatatgGTG
AAGGTTTTGCCAGTGATATGGTGTCTTTTTTCAATCTCCGATTGGGTCAT
TAAATCATCaagtttcgatatttttataagaaaggttATTCACTCGCAAG
GGGACGGGTGTAGTTTAAAATTTATTGTACAAAAAAGTTAATCCTACCAT
GGTCTTTTTTGATTCGATCGATATTGATCAAAACGAACCAGGGAGaaaga
gtaaaaaaaactttcaaaaaacctAAAGAAACATCGCCTGGAATTTATGA
AGCTGAACAATCAAATGCTATtgaatttgattgattgatatgaATATTAA
TTTTTAGCTTCAGTTGAACTATATAAGGGAACAAAATTATGCGGAATGAA
AATTTGGTGGAAATAccaccaaaattaaattcccgccaaatttaaaatat
ttttttcccgaATGAGTATTATTtcagtctttaaaaaaaacgttctttct
catttaaaaaaaaagcgcCAAAAATATCCTTCATCTGCCAAAGGAAATTC
CCAACGAAAATAATGTTTTCGGCCATccaacaaattaaattcctgctcAA
ATTTCTTCCTTGAGTTAGAATCTAAAAGTGACAGTTTCTAATGACTAATA
TGGTTTGCCATTACATTATTCTTTAACTCTTTCAGAGGATGAACCAATAG
AAACTAAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAA
GCTCCCGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAAT
TCAACAAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaAAAAC
AAGTGGTCCAAGATCGCCAAAAGAAAAATCGTCAACAGCAAGAAAAGTCT
AAGAAGAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAA
ATTAGTACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGG
ATATAGATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAA
ACACAacctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGG
TTTTGATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAG
GTTTACAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTC
AAAGGCNGACTTAGAATCAGGTTTACAAGCACCAATAACAGCACAGCATT
TGTATTCCGTCAGGGTCAAAGATATTGGTACTGATGCAAGAGAGTTTCTA
CAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGAGATTAAAATc
caatttcaaacaaaaagttGGGTCGAAAAAGTCTAAACAAATTGGTAAAA
GGAAAAAGATTATATGATgtagttttttttgtaaatgtttttatagtttt
ataacattgattattttattttactaaCTTTATACATTTATAACCTAAAT
GTGCAATTGATTTTATAAGAGGCTAAATATATCACAAAAGTTTGCTCCGG
GATCgtgtcaaaattaaaaagtatttAAAGTAAGatctgagaaaattttt
tccctATTGTATTATGGGAGAATTGGAAAAGTTTGTACATCTCTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001309XLOC_001309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002440-exon-sc0000020-1491911889:481486..481562TCONS_00002440-exon-sc0000020-1491911889:481486..481562Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:481486..481562TCONS_00002440-exon-sc0000020-1510915933:481486..481562Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:481486..481562TCONS_00002440-exon-sc0000020-1575043694:481486..481562Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:481864..481968TCONS_00002440-exon-sc0000020-1491911889:481864..481968Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:481864..481968TCONS_00002440-exon-sc0000020-1510915933:481864..481968Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:481864..481968TCONS_00002440-exon-sc0000020-1575043694:481864..481968Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:482318..482404TCONS_00002440-exon-sc0000020-1491911889:482318..482404Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:482318..482404TCONS_00002440-exon-sc0000020-1510915933:482318..482404Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:482318..482404TCONS_00002440-exon-sc0000020-1575043694:482318..482404Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:483251..483382TCONS_00002440-exon-sc0000020-1491911889:483251..483382Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:483251..483382TCONS_00002440-exon-sc0000020-1510915933:483251..483382Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:483251..483382TCONS_00002440-exon-sc0000020-1575043694:483251..483382Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:485241..485330TCONS_00002440-exon-sc0000020-1491911889:485241..485330Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:485241..485330TCONS_00002440-exon-sc0000020-1510915933:485241..485330Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:485241..485330TCONS_00002440-exon-sc0000020-1575043694:485241..485330Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:485730..485837TCONS_00002440-exon-sc0000020-1491911889:485730..485837Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:485730..485837TCONS_00002440-exon-sc0000020-1510915933:485730..485837Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:485730..485837TCONS_00002440-exon-sc0000020-1575043694:485730..485837Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:489017..489112TCONS_00002440-exon-sc0000020-1491911889:489017..489112Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:489017..489112TCONS_00002440-exon-sc0000020-1510915933:489017..489112Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:489017..489112TCONS_00002440-exon-sc0000020-1575043694:489017..489112Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:489889..489987TCONS_00002440-exon-sc0000020-1491911889:489889..489987Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:489889..489987TCONS_00002440-exon-sc0000020-1510915933:489889..489987Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:489889..489987TCONS_00002440-exon-sc0000020-1575043694:489889..489987Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:490201..490317TCONS_00002440-exon-sc0000020-1491911889:490201..490317Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:490201..490317TCONS_00002440-exon-sc0000020-1510915933:490201..490317Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:490201..490317TCONS_00002440-exon-sc0000020-1575043694:490201..490317Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:491321..491839TCONS_00002440-exon-sc0000020-1491911889:491321..491839Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:491321..491839TCONS_00002440-exon-sc0000020-1510915933:491321..491839Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:491321..491839TCONS_00002440-exon-sc0000020-1575043694:491321..491839Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1491911889:491907..492283TCONS_00002440-exon-sc0000020-1491911889:491907..492283Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1510915933:491907..492283TCONS_00002440-exon-sc0000020-1510915933:491907..492283Clytia hemisphaericaexon
TCONS_00002440-exon-sc0000020-1575043694:491907..492283TCONS_00002440-exon-sc0000020-1575043694:491907..492283Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:481486..492283 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.19598	3.84003	1.04061	1.14488	8.33001	6.83567	9.2309	6.67213	1.89798	1.62394	0.259527	1.26986	0.99805	1.9901	1.71509	2.52946	3.14625	1.54533	0.336729	1.16378	2.64634	1.80924	8.58115	6.28603	1.27592	1.40924	1.70347	1.12012	3.14569	4.13018
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002440 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top