TCONS_00002436 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002436
Unique NameTCONS_00002436
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1751

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002436 ID=TCONS_00002436|Name=TCONS_00002436|organism=Clytia hemisphaerica|type=transcript|length=1751bp
GATAAATTATATTGTCCACAGGTCTGGTTCAGTTTTTTTCCAgtctgaaa
atgaagaaagataCACCCAGAAGACAAACCAGAGCCTCTTCAAGGCTAAA
AGAAAAACACGTAGAAACAATAGAAGaagaGAGCTTTGTAGAAGACCAAC
AAAACACAACTTTggtaaagaaatcaaaatcaaagaaagattCAGTCGAA
GATTTCCCAAAAGctATAGATAAAGTTGGAGGTACCCAACAAGAAGCACA
AATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaagacaaagaaa
aatcactTGAGATAACAGAGATTGATGAAACACAAGAAGATGCAGAAAAG
GAAACACAGGATTCTCCAACAAAAAAGAGgaagaacaaaaaaaacaaaga
aaatgtaacTGAGGCTGAAGAAATGAATGATACAGGAAAGAATATCAATG
AATCACCAGTGAAAAAGAGCAGGAAAACcagaaaagcaaaagaaaaatca
CCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATACATTAGaagaaaa
gTCACCAGTGAAAAAAGGCAagaaaggaagaaaaacaaaagagaaatCAC
TTGAGTTTGTTGAAGATGACAAACCAGACGAACATACAGAGCCACAAATT
ACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaaacagtaaaga
aaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGAAGAAGAGCTAC
AAATAAAGGAATCCCctgtgaagaagaagaaaaggaaatcACCTAGACAG
GACAAAGAACAAATATCAGAGATCACTGAGGATGATGCCAATGACAAAGA
AatagAGGATGAACCAATAGAAACTAAAGTTGAATTGAATAATTCACCAC
CAACAGACTCTGAAGATGAAGCTCCCGAGGGGATTTCTTTAAAAGACAGT
CGTAAGAAAGCTATACAAATTCAACAAGACATCTCTGAtgctaaaaaatt
gaaaaaatcacatcaAAAACAAGTGGTCCAAGATCGCCAAAAGAAAAATC
GTCAACAGCAAGAAAAGTCTAAGAAGAAAAGCCATCAGTTACCGGATAAG
ATTTCAGAGGATGTTTTGAAATTAGTACAGCAAGAGGCTGAAGAGGAGCA
AAATTCAGATTCTGAAATGGATATAGATGAACTGTTAAACCAAATAGGTC
AAGAGAAACCTGCATTTAAAACACAacctaaaaatcagaaaattactTTT
GAAGATGACGATGATCCTGGTTTTGATGAACAATTTCTTGATGAAGAGAG
TGAGGATGACTTAGAATCAGGTTTACAAGCACCAATAACAGCACAGCATT
TGTATTCCGTAGATAAGGTCAAAGATATTGGTACTGATGCAAGAGAGTTT
CTACAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGAGATTAAA
ATccaatttcaaacaaaaagttGGGTCGAAAAAGTCTAAACAAATTGGTA
AAAGGAAAAAGATTATATGATgtagttttttttgtaaatgtttttatagt
tttataacattgattattttattttactaaCTTTATACATTTATAACCTA
AATGTGCAATTGATTTTATAAGAGGCTAAATATATCACAAAAGTTTGCTC
CGGGATCgtgtcaaaattaaaaagtatttAAAGTAAGatctgagaaaatt
ttttccctATTGTATTATGGGAGAATTGGAAAAGTTTGTACATCTCTGGT
G
Run BLAST on NCBI

transcript from alignment at sc0000020:479826..492283+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002436 ID=TCONS_00002436|Name=TCONS_00002436|organism=Clytia hemisphaerica|type=transcript|length=12458bp|location=Sequence derived from alignment at sc0000020:479826..492283+ (Clytia hemisphaerica)
GATAAATTATATTGTCCACAGGTAACAActgtgttgtaaaagacaaatca cTTGTTATATATgtgtgaagaaattcatagaTAAGATTTAATGCTGGAGT ATTAGTAATTAGTTATCAAAAAGACTGTTGTGTTCTCCTAAACAACTATT GTGAACGTGTAATTATAACTGTGCCATTGTTTTTCAAGGAGAAAGAGCTC TCTTGAAACCTCAAATAGTCTCTCTCAAAAAACCTCTTATTCTGCATCTA GATTAAAATGATATTTCTTATATTCTAATGCTATTATATTCAATCCAATC AGAGGGTCATTTCTTATTTAAAGGAGCACTAAGATGAGATTTCagcatat attttataattaCTGATTACTGATTTGCCAGGGGGGGTCAACATCaagat accagacccatagccgggtggaggtgtctttttttcctttaaaagtttga aaagtcaagttggtattgatgagggtgggtccccctttttttagaaaaaa agagttatcctcagttggtattgataccaaaatagcgggcgggtacccct ttttttaaataatatgattcagaaagttggtatccatatcaaaatgacag caaaactttcctaaattctgcccttatagctagaaaataccctGGGGTAC ATttcagtctaaacaggtttcaattggatttgttttagtttatgagtata atgactgtaaatgagtaataagtataaatgactttgaagtttgtttattt tggactttttcgatatttttctttttgatcaagcctgaagaaaaaacatt ttttctgtgatagcatttggtaatgaatgagtgaatctattctgttctaa aattatgtactaataatagcttctcctagtttttgcacatcaattattat atttagatatattttgctagcttcattgggtttgtttttattatattgtc agttttcagtcattttctattttagcatNATAGAAGGTGAGCCATTGAAA tagatttctttgattttttctccaaaacaCTATATATCTGAACTAATGTT ACAAATGCTAATTGGCATACCTTATCCGGGAAAAATGTTAGGGaaagtgt caaaatttttcatGGGTGTCAGTATTTTACTTGTCTAAAAACCTGAGGTT TCAtcatttgaaaaagccttgcTCGGATTATTTATCACTGGTCCCTGGAT CACTTTTACCTGATTTCTTATTATTGTCAATTACTGGTTTCTCTTGGGTA AAAAAATTNgtttttttgaagtttctcttagtaccctgtttgtgtgggag ggggtgggtcccctttaaacagctttaagctcaaatttgtcagattggta tcggtactaaattagggggtgggtcccatgatattttgtcaaattcaaaa agtcatgttggtatcggTACCAAATTAatggggtgggtcccccctttagc tgaaaattatgattttcaagctggtatcgataccaaaataagggggtggg tcccccctttttctgaaaattatgattttcaagttggtatcgataccaat tttggggtggtggtgttaacttagctcaaaaggtcaaaagtcaggttttt gggctatgggttggtaatataaatgttgacccccccccctttttattttt gagtGTGCAGAAACAGGCCTTCCTCAATCTAAATAGATAGATCGCACACC TAAATAAAAGACTCATAAAAATTAATAGGATTATAAAGTATGTGTTGTAC ATTATGCATTACTTAAATTTCTCTGAATGACCAATATACAGCGATAGGTC CCTTTTGAATTAAAGGATCCCAGGACTTAGGCCACTTTTGAATTAGGGTA GCAAAATGTATTCTTAAACTTTTTCAATTGAAAagagtattttaattttt gtttttctgaaaTGGAGGTTTTTTACTCTTCTTCTTAGTTTATATTTCTC ACCATTCACTTCTGTCAGCTTCTGTTACTAAGTTACAAATTGTTGGTTAT TTGTTGTCCATTTTTTTTCCTCACGGTTATTTACCTAGGTCTGGTTCAGT TTTTTTCCAgtctgaaaatgaagaaagataCACCCAGAAGACAAACCAGA GCCTCTTCAAGGCTAAAAGAAAAACACGTAGAAACAATAGAAGGTGAGCC ATTGAAAtagatttctttgattttttctccaaaacaCTATATATCTGAAC TAATGTTACAAATGCTAATTGGCATACCTTATCCGGGAAAAATGTTAGGG aaagtgtcaaaatttttcatGGGTGTCAGTATTTTACTTGTCTAAAAACC TGAGGTTCCAtcatttgaaaaagccttgcTCGGATTATTTATCACTGGTC CCTGGATCACTTTTACCTGATTTCTTATTATTGTCAATTTCTGGTTTCTC TTgggtaaaaaaatcatttttgatccCTTGCATTAAtgcatttaaaaatg attttaaaatgatatttttttgtgatactttttcttttttagaagaGAGC TTTGTAGAAGACCAACAAAACACAACTTTggtaaagaaatcaaaatcaaa gaaagattCAGTCGAAGATTTCCCAAAAGGTAATAAAATAATCGATTGGT TTCAAAACTCTTTTTATGGTTTTTTAGAATTATTAAATCAGcaaaatcag tttttaactCTCACCAATATTTGAGAGATATGACTTCATTTGGAGCTTTA AAAAAGAGTTTTTCAAAGTagctcatttttttctttccataaATATGTTT GAatgtagcctggagatccatgctatgattacTTCTTTTATATAAAGATG GAGAAATGAATTGCATGGTTTNATCCATGCTATGATTACTTCTTTTATAT AAAGATGGAGAAATGAATTGCATGGTTTGGGCTATGAGTTTGAATTTTCC AGCTCCAAAAGGACCAGTTGAAAACACAGCTAATCAAATCTTGTTACTAT TTACTATTCTTTTAAGTTGCtttaattttagtaagtgaggaaaGCGCTAA ATTCCAAGATTTCTTAGATTCGTCCTCACAGCCTGAACCCATCATGTATA CATAAATACAGGACAGGTCTCCTGTGTCTAGTTTGAATAATACTTCTAAA TAAAACAGCACTGAATGTTCTATGTCAAAATTAACTTGCTTACATTTTCT GACCGTTCAGATGAAAttctgtagaaaaaaaactttcattttagTTAATA GAATGAAAGAGAAATCCTTTGATTTCACTATGTGAATCAACACTTGTACT CATTTTTAATCATTCAGCCAATGTGTTATCTGAATTGTTTtcgtagaaaa aatctttatctcGTCAGATCTCGTTGTGTatcaaaattaccaaaataaat tgaaaaatatcttatcGTAGCCCATTATTGCTCTGTGTACTGTATGATTA AATGAAatatatgatctcttttaagctATAGATAAAGTTGGAGGTACCCA ACAAGAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaa aagacaaagaaaaatcactTGAGATAACAGAGATTGATGAAACACAAGAA GATGCAGGTAATTTTGATTATTGTTCTTCATCAGATCTATTGTCTCTTTT TTATTATGCCCCTTTAAAGTGTGAAAAGACTGGGTTAGTTTACAATGCAG GATTGAAATCAAATGTTTGAAGTTGTTGCATTTATTTTCGCATTAAAACA TAATTTTGACATGGTTCCTTgccaataaaaatttgaatgaaagaaAAATC CATTGATTTCACTATGTGAATCAACACTTCCACTAATTTTTAATCAATCA GCCAATGTGTTATCTGaattgttttcttaaaaaaatctttatctcGTTGT GTATTATAATGaccaaaataaattgaaaaatatcttatcGTAGCCCATTA TTGCTCTGTGTATCGTAAGATTAAATGAAatatatgatctcttttaagct ATAGATAAAGTTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACC TACGAAAAAGAGGAAGAccaaaaaagacaaagaaaaatcactTGAGATAA CAGAGATTGATGAAACACAAGAAGATGCAGGTAATTTTGATTATTGTTCT TCATCAGATCTATTGTCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAAA GACTGGGTTAGTTTACAATGCAGGATTGAAATCAAATGTTTGAAGTTGTT GCATTTATTTTCGCATTAAAACATAATTTTGACATGGTTCCTTgccaata aaaatttgaatgaaagaaAAATCCATTGATTTCACTATGTGAATCAACAC TTCCACTAATTTTTAATCAATCAGCCAATGTGTTATCTGaattgttttct taaaaaaatctttatctcGTTGTGTATTATAATGaccaaaataaattgaa aaatatcttatcGTAGCCCATTATTGCTCTGTGTATCGTAAGATTAAATG AAatatatgatctcttttaagctATAGATAAAGTTGGAGGTACCCAACAA GAAGCACAAATAGAGGCGTCACCTACGAAAAAGAGGAAGAccaaaaaaga caaagaaaaatcactTGAGATAACAGAGATTGATGAAACACAAGAAGATG CAGGTAATTTTGATTATTGTTCTTCATCAGATCTATTGTCTCTTTTTTAT TATGCCCCTTTAAAGTGTGAAAAGACTGGGTTAGTTTACAATGCAGGATT GAAATCAAATGTTTGAAGTTGTTGCATTTATTTTCGCATTAAAACATAAT TTTGACATGGTTCCTTgccaataaaaatttgaatgaaagaaAAATCCATT GATTTCACTATGTGAATCAACACTTCCACTAATTTTTAATCAATCAGCCA ATGTGTTATCTGaattgttttcttaaaaaaatctttatctcGTTGTGTAT TATAATGaccaaaataaattgaaaaatatcttatcGTAGCCCATTATTGC TCTGTGTATCGTAAGATTAAATGAAatatatgatctcttttaagctATAG ATAAAGTTGGAGGTACCCAACAAGAAGCACAAATAGAGGCGTCACCTACG AAAAAGAGGAAGAccaaaaaagacaaagaaaaatcactTGAGATAACAGA GATTGATGAAACACAAGAAGATGCAGGTAATTTTGATTATTGTTCTTCAT CAGATCTATTGTCTCTTTTTTATTATGCCCCTTTAAAGTGTGAAAAGACT GGGATAGTTTACAATGTAGGATTGATATCAAATGTTTAAAGGTGTTGCAT TTATTTTCGCATTGAAACATAATTGTTCCTTTCTAATAAAAACGCGACCA AATTCCTTCTTATTTTTCATTGTAATGAGTTATTTAGTCAGAacaatgac aacaaagtttCTCAATACCCTGATAAAATTGTCATTGTTGCCTGATAATA ATATTGTTCATTTAGAAAAGGAAACACAGGATTCTCCAACAAAAAAGAGg aagaacaaaaaaaacaaagaaaatgtaacTGAGGCTGAAGAAATGAATGA TACAGGTAGAAAACTAGATTTGTCCATTGTTTTTTGCTTTTGTTGCGCAA GGTCAACAGACCCAAAGCCTTTTCAAATTCAGAGCAACTAAAATCACTCC CTAGTCAAGGTACCCTTAAATAAactaagtttttttcaaaacctgaaTAA AGGAGAACAAAGCTGGCAAAAAAGGTTAGGTGCTTAGCCTGTATAAAGAT AAAAGAATAAAGTGAATTTTTAAATGCCATTTTGTCACTTCGAATTTTCG AATATTATTTAATTTCAACTAAGGAAAGGTTgttattctcatttttttaa ACAGGATAGCACTGGACTTGGCAGCCCTAGGTCCTAACTTACCAGTACAG AACTGTAACAAAATCTCGCGTGGTACCACTTTAGACTCTATTTCTTTTAA CCAGGAAAGAATATCAATGAATCACCAGTGAAAAAGAGCAGGAAAACcag aaaagcaaaagaaaaatcaCCGGAGTTTGTTCAAGATGATGATATTCAAG AAGATACATTAGGTATGGGgctgtccacatagtacgtacgcactaaaggg ggaggggggtcttctcaaaagtgTATGAAAAGCGAGTTAAAGAAAAATGT ATGTACGCattgtaaagaaaaatttttgtttttttgtcgacttttacacT TCTTATCTgttcttatacgcatcaaggaatagaaaaagtttcttaataaa caacaagtttcatgtatgaaatgaAGATCcaaaccaaacgatttgaattt aaaattttcttcaaccgaggggggcGGGGGGGGAGTTATGAAAAAGTACG TTTTTTACcaggggtatagccatttgcgtacaaGGGGTACCCCCtgtact cgattttcgacattttagtgcgtacatACAATGTGGAAGGCCCCTATGCA ATATTTAATAAGATCCTTATCCAAAGAATCTGACTGTAACTATTTTCTGT TGTATGGCTGGCAACGGATCAAGTTAACACCTGCCAAGTAAAATTCAAAA CTGCGTAAGGCCTACCCTCTTcgtttgtctgttaccagcttttttttggt attggttctttgttagtttttttgtacaaagatatggaaaaatTGGTAAT AACTGAgctccattttcaaaaaaaagttttttgcttgccaaaaaatgtca aaatatgcGGAAGTTcgttattttagattttcaaagatttttttttNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNACTTTTACACTTCTTATCTgttcttatacgcatcaaggaatagaaa aagtttcttaataaacaacaagtttcatgtatgaaatgaAGATCcaaacc aaacgatttgaatttaaaattttcttcaaccgagggggggggggggggag ttaTGAAAAAGTACGTTTTTTACcaggggtatagccatttgcgtacaaGG GGTACCCCCtgtactcgattttcgacattttagtgcgtacatACAATGTG GAAGGCCCCTATGCAATATTTAATAAGATCCTTATCCAAAGAATCTGACT GTAACTATTTTCTGTTGTATGGCTGGCAACGGATCAAGTTAACACCTGCC AAGTAAAATTCAAAACTGCGTAAGGCCTACCCTCTGcgtttgtctgttac cagcttttttttggtattggttctttgttagtttttttgcacaaagatat ggaaaaatTGGTAATAACTGAgctccattttcaaaaaaaagttttttgct tgccaaaaaatgtcaaaatatgcGGAAGTTcgttattttagattttcaaa gatttttttttaatcaattctACCATCCTAGAAATTGGAGGGAGCAGCCA ATTGTCGCCACTATAATGATTTTTCTTGATATTCTCTGTACTCATTGAAT TTACCGATTTTTTCTTCCTTAATCTTCATTTAGCATGgtttaattttcat aaaaaaattattttcaatcacTTGATGtacagccagtaaaatttatTTGA GCCTTCTTTCTCCTTTTTCTCTTCGTCTTTTTGACATCAGGTcttcatca ggtaggtccaatcaaCATCCAtccattattattattttcagaagaaaagT CACCAGTGAAAAAAGGCAagaaaggaagaaaaacaaaagagaaatCACTT GAGTTTGTTGAAGATGACAAACCAGACGAACATACAGGTATAAGCATGAC ATATTGTGCACTGAAAAAGCAGCAATTATAATAGCATGCCATATTTCGGA AAGGATTAAATTAGGACTGTCATTTTttcttctgttattttattCTGTTG TCAactcagcgttttgattggtcgagagcatcgagatatttgtgatattt aaaatatttcacatGTGGAAAATATGACTACGTTGACTTTCGGGGGCTGC GTGAGCGgtgggagaaaaatcaaaacaaaacagccgaaaagaactgacta aagaaaaaataaagatcagCAAAAAGATTATTTGCAGATTAATTTTTTAC TTTGGATTTCTTCCATTAGAGACactaaaatgggggggggggtttgtagg ggttcgaaataccgttttcccgtcaaaatttttgctgaatcccggaatcc cgaaaattgaaaaaataataacaccgtcacaccagCTTGTACAGGGaaaa aatgtacctaaataccgtcagcttctgattttaaaataccgttttcccgt ctcttttttcgtcaaatcccgtataataccgtactaaaaaagggccaatc ccgtcacaccgtaaaagtacaaacccccctctaaaatcaaatctaatgaa atgtaaaagtaaaaaattaaataaaagtagaatttcatctaaaaaatctc ctaaaaagacagcaaaaatttagatttttgaaatttcagggtcggtcggg cccatAAAACAAACTAATTAAATTGGTCTTGCCTAATAATACTTTCATTT AATATTATTTAAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAG CCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGTG AAGACATAGCAGGTAAAGCACTGTTCTTTGTAATACTTCTTTATAATGGC TTTGTTGTCAGTCAACATAGATTCGACATGGAAGTGTGAGGGTATGCAGT CTAATATCAAAGAAACGAAAATGGAACATAATCTACATACAAAAGATTTT CTACTAAACTATAGGTTATCTGTTACGCTCCTCTTGACATACCAAAAATT ATGTTCACAATTTAACTCTTTTTAGAAGAAGAGCTACAAATAAAGGAATC CCctgtgaagaagaagaaaaggaaatcACCTAGACAGGACAAAGAACAAA TATCAGAGATCACTGAGGATGATGCCAATGACAAAGAAataggttttgtt tttttatatttataaaaggGTTTAGGTTTAATTTCACTATCGGAATCAGA AGACGACCTATGATGGTCTCATCTTCTTAAATTCCTCCTTAAGATAGAGG GGACTTGAACGATGTTGATTAGAATTACCCTATAAGAATAGATGTCAAAG ATGGGTTAAAGGGaaattaaagtagtaaaatgtaaacattgcgcgaacca cgtgtcattaaagagaacaattgagatcacgtgtccaaaacaaacttgta agacaattgaacaatcaaaataattagccatatttggtttgattttgtat ccgctgcatacagtttgtttacaaatttcgcaagtactgttatgtccctt taatatgGTGAAGGTTTTGCCAGTGATATGGTGTCTTTTTTCAATCTCCG ATTGGGTCATTAAATCATCaagtttcgatatttttataagaaaggttATT CACTCGCAAGGGGACGGGTGTAGTTTAAAATTTATTGTACAAAAAAGTTA ATCCTACCATGGTCTTTTTTGATTCGATCGATATTGATCAAAACGAACCA GGGAGaaagagtaaaaaaaactttcaaaaaacctAAAGAAACATCGCCTG GAATTTATGAAGCTGAACAATCAAATGCTATtgaatttgattgattgata tgaATATTAATTTTTAGCTTCAGTTGAACTATATAAGGGAACAAAATTAT GCGGAATGAAAATTTGGTGGAAATAccaccaaaattaaattcccgccaaa tttaaaatatttttttcccgaATGAGTATTATTtcagtctttaaaaaaaa cgttctttctcatttaaaaaaaaagcgcCAAAAATATCCTTCATCTGCCA AAGGAAATTCCCAACGAAAATAATGTTTTCGGCCATccaacaaattaaat tcctgctcAAATTTCTTCCTTGAGTTAGAATCTAAAAGTGACAGTTTCTA ATGACTAATATGGTTTGCCATTACATTATTCTTTAACTCTTTCAGAGGAT GAACCAATAGAAACTAAAGTTGAATTGAATAATTCACCACCAACAGACTC TGAAGATGAAGCTCCCGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAG CTATACAAATTCAACAAGACATCTCTGAtgctaaaaaattgaaaaaatca catcaAAAACAAGTGGTCCAAGATCGCCAAAAGAAAAATCGTCAACAGCA AGAAAAGTCTAAGAAGAAAAGCCATCAGTTACCGGATAAGATTTCAGAGG ATGTTTTGAAATTAGTACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGAT TCTGAAATGGATATAGATGAACTGTTAAACCAAATAGGTCAAGAGAAACC TGCATTTAAAACACAacctaaaaatcagaaaattactTTTGAAGATGACG ATGATCCTGGTTTTGATGAACAATTTCTTGATGAAGAGAGTGAGGATGAC TTAGAATCAGGTTTACAAGCACCAATAACAGCACAGCATTTGTATTCCGT AGATAAGGTCAAAGGCNGACTTAGAATCAGGTTTACAAGCACCAATAACA GCACAGCATTTGTATTCCGTCAGGGTCAAAGATATTGGTACTGATGCAAG AGAGTTTCTACAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGA GATTAAAATccaatttcaaacaaaaagttGGGTCGAAAAAGTCTAAACAA ATTGGTAAAAGGAAAAAGATTATATGATgtagttttttttgtaaatgttt ttatagttttataacattgattattttattttactaaCTTTATACATTTA TAACCTAAATGTGCAATTGATTTTATAAGAGGCTAAATATATCACAAAAG TTTGCTCCGGGATCgtgtcaaaattaaaaagtatttAAAGTAAGatctga gaaaattttttccctATTGTATTATGGGAGAATTGGAAAAGTTTGTACAT CTCTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001309XLOC_001309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002436-exon-sc0000020-1491911889:479826..479846TCONS_00002436-exon-sc0000020-1491911889:479826..479846Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:479826..479846TCONS_00002436-exon-sc0000020-1510915933:479826..479846Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:479826..479846TCONS_00002436-exon-sc0000020-1575043694:479826..479846Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:481864..481968TCONS_00002436-exon-sc0000020-1491911889:481864..481968Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:481864..481968TCONS_00002436-exon-sc0000020-1510915933:481864..481968Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:481864..481968TCONS_00002436-exon-sc0000020-1575043694:481864..481968Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:482318..482404TCONS_00002436-exon-sc0000020-1491911889:482318..482404Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:482318..482404TCONS_00002436-exon-sc0000020-1510915933:482318..482404Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:482318..482404TCONS_00002436-exon-sc0000020-1575043694:482318..482404Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:484820..484951TCONS_00002436-exon-sc0000020-1491911889:484820..484951Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:484820..484951TCONS_00002436-exon-sc0000020-1510915933:484820..484951Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:484820..484951TCONS_00002436-exon-sc0000020-1575043694:484820..484951Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:485241..485330TCONS_00002436-exon-sc0000020-1491911889:485241..485330Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:485241..485330TCONS_00002436-exon-sc0000020-1510915933:485241..485330Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:485241..485330TCONS_00002436-exon-sc0000020-1575043694:485241..485330Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:485730..485837TCONS_00002436-exon-sc0000020-1491911889:485730..485837Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:485730..485837TCONS_00002436-exon-sc0000020-1510915933:485730..485837Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:485730..485837TCONS_00002436-exon-sc0000020-1575043694:485730..485837Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:489017..489112TCONS_00002436-exon-sc0000020-1491911889:489017..489112Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:489017..489112TCONS_00002436-exon-sc0000020-1510915933:489017..489112Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:489017..489112TCONS_00002436-exon-sc0000020-1575043694:489017..489112Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:489889..489987TCONS_00002436-exon-sc0000020-1491911889:489889..489987Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:489889..489987TCONS_00002436-exon-sc0000020-1510915933:489889..489987Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:489889..489987TCONS_00002436-exon-sc0000020-1575043694:489889..489987Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:490201..490317TCONS_00002436-exon-sc0000020-1491911889:490201..490317Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:490201..490317TCONS_00002436-exon-sc0000020-1510915933:490201..490317Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:490201..490317TCONS_00002436-exon-sc0000020-1575043694:490201..490317Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:491321..491839TCONS_00002436-exon-sc0000020-1491911889:491321..491839Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:491321..491839TCONS_00002436-exon-sc0000020-1510915933:491321..491839Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:491321..491839TCONS_00002436-exon-sc0000020-1575043694:491321..491839Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1491911889:491907..492283TCONS_00002436-exon-sc0000020-1491911889:491907..492283Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1510915933:491907..492283TCONS_00002436-exon-sc0000020-1510915933:491907..492283Clytia hemisphaericaexon
TCONS_00002436-exon-sc0000020-1575043694:491907..492283TCONS_00002436-exon-sc0000020-1575043694:491907..492283Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:479826..492283 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.381 13.1286 6.14889 3.26682 12.7002 7.94867 4.87025 7.61026 7.48079 8.13421 6.95944 4.1586 4.17079 2.70825 5.07713 5.76149 5.52591 6.64987 2.27323 2.31912 5.33301 5.93813 17.0167 16.0262 4.49543 3.6977 3.09154 2.73784 15.1059 18.1235
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002436 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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