TCONS_00002426 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002426
Unique NameTCONS_00002426
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1388

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002426 ID=TCONS_00002426|Name=TCONS_00002426|organism=Clytia hemisphaerica|type=transcript|length=1388bp
ATTAAAGAACATTATGTgttaaattgaattttaaatgcAAGTATAGCCTG
GTTTATTATCTTTTTAAGGTCGAAAATTTGAGAGAATATAACATTATTGA
AACAACAGAAAAACACATTTATGGCACTTGTTCATTGCGTATAAATATCG
AAGGATCAAGTTTAACAGAAGGCTTGTAGAGATATAACTTATTAGGAACA
ATGGGACTAAATGAAAAGATCTTGATTTTTACATCACTGTTGAATTACCT
ATCATCAGAAAAGGTTTATatctttgatgtttttaaaagaaaaggtTTGA
CCGAAGATTGGAATAAAGACAATTCTCAATGTGATGGGGTATCAAGCTgg
tattttgatgaaaatgaccagGCATCTCCAAGATTTCAAGTATGTTTTAC
CAGAAATTGTTTCCTGGAAAGTCCATCATACCCAATTACCTCTATAAACA
CTGTTTATGCAGATGCTAAGTTTACTGGGAGATATTGCAATGCTCTCCCT
AAGCCGAACCCAGATTGTGGAGAGAACATCACAGTAAATGCCATTATGCT
AGATACATTTCCCAATACAAAAACTCACAATACTCCAACAGAGAAAGAAA
TCAACTTCCCTGTAATGGATGATCTAAAGGTACCAATACCACAGAAAAAT
GGGAGACCGCCAAGCTTTTTTGATGCAAAAGAAACCATAACATACGATAA
CAAATTGAACAAAACATTTATTAGATTATTGTTTGATTCAAAAATGGGTT
GTGGTGGTGTTAGTGACTTGGAAGTATATTATTATAAATGTCCATCTACA
ACTAGTTCTCTTGCAGTATTTGGAGATATCAATGCTCCAACTTACTCCGA
AAACGTCAAGGAATATCAAGGAAAATGTGTTGATAATGCATTCCAAGTTG
TTGATGAACCATTAACAATGAAGTGTTTATGGAATGGAACGATTGCGTCA
ACGACTGGACAATGCATTTGTTTACAAGGATACGAGAAAGAAGGAAATGA
GTGTAAAATTCCCGGTAAAGTTCGAAATTTAATGCAAAAGAGCTTAGACA
ATGGTAAAGTTGAATTGAGTTGGGATCCACCTTTTGCAAAAGGAAACAAT
ATCATCACCTACTTATTGACATATGGAGGATCCACAAAGAAAACAACACT
TACAACGCACATACTTGATCCTGATGTTGAAGAACAAACATTTTCAGTAG
aaATTGCAGCACAAGTATCAGTGGGTGGACAACTTTTGACTGGTGAATCA
AgcacttttaaagaaaaaattcacgTCAAAGGAGGAGCTGCTTTAGATAT
GGCAATTGGTGTTGGTGTTGGCGTTGTTTTATTGGTTATCATTATTGGTA
TCGTTGCGTTTTACATTTATCGCAAGAAAAATCTTAAA
Run BLAST on NCBI

transcript from alignment at sc0000020:220417..233601+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002426 ID=TCONS_00002426|Name=TCONS_00002426|organism=Clytia hemisphaerica|type=transcript|length=13185bp|location=Sequence derived from alignment at sc0000020:220417..233601+ (Clytia hemisphaerica)
ATTAAAGAACATTATGTgttaaattgaattttaaatgcAAGTATAGCCTG
GTTTATTATCTTTTTAAGGTCGAAAATTTGAGAGAATATAACATTATTGA
AACAACAGAAAAACACATTTATGGCACTTGTTCATTGCGTATAAATATCG
AAGGATCAAGTTTAACAGAAGGCTTGTAGAGATATAACTTATTAGGAACA
ATGGGACTAAATGAAAAGATCTTGATTTTTACATCACTGTTGAATTACCT
ATCATCAGAAAAGGTTTATatctttgatgtttttaaaagaaaaggtTTGA
CCGAAGATTGGAATAAAGACAATTCTCAATGTGATGGGGTATCAAGCTgg
tattttgatgaaaatgaccagGCATCTCCAAGATTTCAAGTATGTTTTAC
CAGAAATTGTTTCCTGGAAAGTCCATCATACCCAATTACCTCTATAAACA
CTGTTTATGCAGATGCTAAGTTTACTGGGAGATATTGCAATGCTCTCCCT
AAGCCGAACCCAGATTGTGGAGAGAACATCACAGTAAATGCCATTATGCT
AGATACATTTCCCAATACAAAAACTCACAATACTCCAACAGAGAAAGAAA
TCAACTTCCCTGTAATGGATGATCTAAAGGTACCAATACCACAGAAAAAT
GGGAGACCGCCAAGCTTTTTTGATGCAAAAGAAACCATAACATACGATAA
CAAATTGAACAAAACATTTATTAGATTATTGTTTGATTCAAAAATGGGTT
GTGGTGGTGTTAGTGACTTGGAAGTATATTATTATAAATGTCCATCTACA
ACTAGTTCTCTTGCAGTATTTGGAGATATCAATGCTCCAACTTACTCCGA
AAACGTCAAGGAATATCAAGGAAAATGTGTTGATAATGCATTCCAAGTTG
TTGATGAACCATTAACAATGAAGTGTTTATGGAATGGAACGATTGCGTCA
ACGACTGGACAATGCATTTGTTTACAAGGATACGAGAAAGAAGGAAATGA
GTGTAAAAGTAAGTACATTTTAGTTTAAGACGTTTTATCATAGATTTCAG
AAATAAATGTTTAAATCTGAATTTGCATTCCAAACTATAACTTTGGATTa
ggttttaacgtttttcttaATATGTAGATGATTGTTATTCTTTATGACAT
TTATGAGAGTGCTATTTGACAAATGCTACATATTTATGTTGTGGCATGTT
TTTTAGAATTCTGTTGATAGAAACTGCGAAATATGACACTGACAGTATGT
CTATATaaatacaaaatacttttaaaggAATTACCCTCCCTGGAAGGATC
ACAAGCCTTTATGTAAAAGACGTTTATGGTAGTAGCGTAGTAggtcgact
aaaatttgggcaaatttgggaggcatttttagaaaattatgaTTTAGGCA
CCCCCtatgaaaagaaaatatctttGTAAAATTACGCGAGTGAAGCGAGC
ACGAAAATTGCCAATTCTAAGGTGTAAAAGGGCCACCACGCAAGTTTATG
GTCTAAAAGCTGGAAAAGACACATTATTCTGGAATGAAACTTTATTACTT
CTACGAggagaatttcaattttttaattccgTTGCTTGAACTAATACAAA
ATAAAACAGCCGTAATGACGGCTTCAAACTCCGGTAACTGTCATGggtca
gcctttcttaatacatttaacataaaatttaaaagaggaTATTCTAGTAA
GTGCGAGTGTAAACGCAAACCAAATCGAGAAATCAAACCGGAAAGATCGG
GAAATCAAACCCGACTGTTGCAATTGGTCGAATTTACACAcaaattacaa
atgaaaaacactgattttaaggAACTCCTTAACGGAAGCCAAACGACAag
ggaaattttgtttttgatgttaTATTTGCTCATTTCTCCTTATCACAAAA
GATCATACTTTCAAATGTTTTGGTAGACGAGGATTAACAGATGACTGGGC
CACATACAATGACAAATGTGTTGGTACACAAAGTTGATATTACAATACTA
ATAACtagtaggggccactatgtcgcgaaaaagcttcccgtgtgcagcag
cttgtgcaaagggattttatgattgaatattgttccttgaatgtagaaga
tcaaaatttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNgagccaaaattgatatttttaaat
tttgcctgtaatgtgtttgggcaagctccaaccttcgacaggcaaaaaat
gaaattgtcaattttggccaatagactctttttaacgaattttcaaacgt
tttcgtaataatattttatgttccctGGAggctcttttttccaaaaaacc
aaaaattttgaattttggaaaatttttatttttcgatgacgaaCCGAGCA
ATgccaaaatataaattttgctTAACATACAATTGTTTTCTAGAAAGCGC
ATCTTATTCAATAAAGGCTGTAATTACCGTTTATGCAGTTGCAAATTTAG
TTAGTAGATTCATCAACCACTGCCTGGTTACGGAGAGAATATTACAGTAA
ATGCTATTATAAATGACTAGCCGGTgaccggcgtcgcacgccggttaaga
tgctgtagctgaacgcactaagagtcctttggatgttgaaggtggcttaa
aagcacgatcaaatataaaaaaagaaatctcaaaGTCAGCATacaaaatc
ttcaaagtttgactctagtCCTCCCCTGGGTGGCTTAtcttaaccatatt
tggattgtGTACTGTCCCTGtgacttaattttttgtttttaaatctgCAA
GTAGATTTTTGTCTCGCTTCGCTCACGTGCCCATCTGCCACCAGTCAGCT
TACCACATTTAGAAATATCAATGCTCCAAGCTTTTcagaaaaagtaaaag
aatatAAAGGTTAATTCCTACGTCAAGGTAAAATGTAAATAGAGGTAGTC
CTGAAGGCAAATACAGTATGACTCAAAAATGTTTTAGATGATGAGGTCGA
AATGCCCTGAAGGAAACATaactcaaaatattttatgtaaATGTGGTCGA
AATAGTGTCCTGTAAAACTAGAGTACGAGTGATAAAAGAACTGTGGGAAA
CAGGAATAGAGACAAAATGTGTTTGGTCGAAATAGTGAAAATTCTTGCAA
AATTAAATGAACGAAAATAGAAATTTGTGAGTTTTGGCGAGTCATTGGGG
ATGCATCAAGAGATAACAAACTTAGCCTAAACCGTATGGAGGACGGTGTA
CCGTATGGAGGACGGTGAGCGTATCTTATCCCCTAAGGAGTGATCTTATC
CCATAAGGAGGATGGGTAGCGGATCTGAGAAAGGGGTTACAGGGTAACCC
ACACCCCCAAATCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGAAATAGTGTCCTG
TAAAACTAGAGTACGAGTGATAAAAGAACTGTGGGAAACAGGAATAGAGA
CAAAATGTGTTTGGTCGAAATAGTGAAAATTCTTGCAAAATTAAATGAAC
GAAAATAGAAATTGTGAGTTTTGGCGAGTCATCGGGGATGCATCAAGAGA
TAACAAACTTAGCCTAAACCGTATGGAGGACGGTGTACCGTATGGAGGAC
GGTGAGCGTGTCTTATCCCCTAAGGAGTGATCTTATCCCATAAGGAGGAT
GGGTAGCGGATCTGAGAAAGGGGTTACAGGGTAACCCACACCCCCAAATC
GTCGCCAAAACTACTCATGCCACACAAACTCAGCGCTTCCTAAAACTTAG
GGACTAAGAGAAAACACAAGCTAGTGAAAAAACGCAAGTAGGTATCTGCC
ATACTATTAAAATAGAACAAAATGCACTGAAAAACTACCAAGTGTCAGGA
TCCCAAACTGTAGTAGTGGAGACAATCTTAGCCATTTTCTGCTGAAATTG
AGTAATGTCGTTGTCAGCTATTCTCAAATATCTTAAATAACAATCACTTG
CCCATCTGCCCAAAATACGGATCATTGAGTCTGAGGCACCTGATGCTAAG
GTGGCTGAAGCTCCACCTATACGGAAACTGTGTGTATTGATGTCCCTAAT
AGTAGGGAGGGCTGTAATCAAAAGCTTGCGAATTACCGTTGGAGAACTGA
AAAAGGGGTCCAGAATAGCTCGGGGAGAGGGCAAGGTAGTTTCGCATGGC
ACCAACCGGGCAAAGGGCATCAAAGGTGGCTGCAATACGTATGGTTGTTC
CCATTCGGAAGGGGTCAGTTTTGCTTGCTTTGATAGGTATTGTCATAATG
GAGAAGCTGGGATTAAACTGAACGTCAGAACGTGACAGGTGTATGCTGCT
GTTGAATTTGGAACGACTGGGGCATGTGTATTCAGAGACTCTCAGTAACC
CAAAGAACGCCACTACACAAGATGTCAAGAGCATGTATTTATCAGCTGTC
GTGAAGCAAGAGgtgtgcaaaaaaatttatatctCTTGGAGATAATTGAT
GGTGATAGGTTTCCTAACGGCTCTGGTAAGTGTGTTGCCTTGTCGTCGTT
TCATGCCTCTGATCAAACGTTGTACAATGGTCATGTCGTGAAGATTCAAC
TGATAGCCAAGCATAGAATTTTGATGGAGGATGCCGTGTATGTAGACCTT
GATGGTTTTGTGAGAGATACCTCTGTTTGCAGAGAAAACAGCAAAGAAGC
AAAGTGAAGATTGGCTGGCGGGAAAGTGGTTCAGTCTTGAAGATTGGCAA
AAGTTGACATAAGATCGTACGCCTGACATGTAAGTGCTTTGGGTGGAAGA
TGCTAGTGAGTCTCTCAAGAAGGAAGCAAGATCTTGTCCAAGACGGCCAT
GACACAAGGTGAGATGATGGTGGGATTCGGTGAACAATCGGGACATATCG
ACTTGAAAGCTTCGACCTGAAGACGAGACAATAAGTCAGCAAAAGTGTTA
CGACGACCAGGGACATGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGTGAACAATC
GGGACATATCGACTTGAAAGCTTCGACCTGAAGACGAGACAATAAGTCAG
CAAAAGTGTTACGACGACCAGGGACATGAACAAAACGAACAGAGATGTTG
TGACGAGCAGTAAGAAAAAACAGTTCTCTAACCAATGCCATAAGCTGTTT
GTCCTTGGAAGTGCCGGACGACCAGATTGCAACGATAGGCTCATTATCTG
TGAACATTGTGATCTGCTTGTTGGTCAGAGGGATGGCGAATGCGGAAATG
GtggcaaaaacagcaaaaagctCAAGAACTGCGATGTGAGTTAGGTCAGA
CATGTCGTATGGCCATGGGTGGGACAACCACTGTCCCTGAAAGAAGCCAC
CTAGACCAAGAAAAGATGCATCAGTAAAAAGCGCAATAGAATCTGAAGTG
ACTGCTGGTTCAGGGAGAAAAGAGACACCATTCCAAGACGACAAAAACTC
AGCCCACATGGCCAAATCTAGACGAACACTAGTAGAAATGTCAATGTGAT
GTGAAAGCTTGGATACAGAGGTGGAAAGATCGATGAGTCGACGCAGGAAA
ATTCTACCGGGGCGGATGACCTTACAAGCAAAAGAAAGAGATCCAATGAG
GGACAAAAGTTCTCGTTTGGTGCATTTCCGGCGGTCCAACCAAAAGTCCA
CAAGTTGACGAAGTTCAAGAAGCTTATCAATAGGAAGACGAATGGTAAAG
GAGCTAGAATCAATTTCAATGCCCAAGAATGTGATAAACTGACTGGGACC
CTCAAGCTTGTCAACTGCCACTGGTACTCCAATGATGTCAAAAACAGCCT
GTACCAAATCCATGTAGTATCGAGTCGTTTCAAAGTTGATAGAGCAGAGA
AAGAAATCGTCCAAATAATGCACCAAAACGGATAGGTCAAACTTAGAAAC
GAGAATCCATTGGAGAGCGTCTGCGAAGCTGTTGAAGATACAAGGAGATG
ACCGACTGCCAAAGGGGAGACAAACGTCAACGAAAAAGCGATCTTGCCAA
CAATAGCCCAACAAGTGCCAATCTTCTGATCGAACTGGGCACAGTCTAAA
GGCGTGCCGAATGTCAATCTTGCCCATGTAGCAACCCACTCCAAGAGAAA
CCACCATATTTACCGCATCGTCGAATGATGAATACTTGACATGACACAGA
TCCTCCGGGATGCCATCGTTGACAGAGTGATCTCGTGGTGACGACAGATC
TAGAATAATTCTTCGGGAACCATCCTTCTTGGGTGCGGAGCCAAGTGGCG
AACAATGAAAGTCAGGGAGTGGGGGATTGGGGAAGGGACCTGCTGTGTGA
CCTCGCTGAAGCTCTTTCAGGATGGATGCAGAGACTGTGTCGCTGTGATG
GATAGCAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAaacggcaggtacaaaatg
cataaaacataatgcatattgcataatgcataatagtattgtgtaattta
cagaacgattttatattttctaaaactctcctctGCAGAGGCTAAAAacg
cgaaaacctctttagaagagtttccaatcagagggatttccccagacata
atatttacttttcgaatccgagcgaaagagaaaatattcgaatcataaca
acaaagggttttccgtcagcataaataataagaagatgcaacagatcaga
aaggtttcccccttcttctttctaaaaaaaacataaacaatggaatgtaa
aaagattcgaagtctattttttTTGATCTACAGATCTAGCTTCcggatga
agctctttaatttgtattggcttatctaacNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctctgagaaaacccagaaag
atcttgctttaaaatttacgttttcgagttagaaaagtaatatacggagg
agatattttcgtgttttttctacattatactatgttctgtaaaatacaac
tatgaaaatcaaaatggcggcaagtattttcagtggatcgtggattttct
tcatcgtccaaaattcaaatttacagcttgctaccctttattttctggta
gaaaatggtgtatttgttttgttgacagtattatctttcaaattttcctt
attatagcctctgaaattgacatttttcaaatattatgcattatgcatta
tgcaatatgcattatgttNATAGCAGATAGGTTGTTACGTCTTGTGCAAA
CAGGGGCTGGACCATCAAAACCTAACTCAAAGCCATAAGTGAACCCATGA
ATAAGAAACTCAACAATGTCCTGACGGTAACCGTCAaggaaaaaactcaa
aatgtgGGGATCAACAGTGGTGTGTGGGGAGGAAGGCAAGGGAAAACTCA
AAGAAGGTAACTCTCTCAAGTGGGCACTGTCACTACCCTTGGCGATGGGG
GCAGTCAGTGGCTGGGTGGTTGAAGGAAGAACAAACAATGCACTTGTGTA
TTCTTGGGCACTGGACTCTGGCACAATTCCCACAGTTGAAGGCAATGCAG
ATCTGGCCAGATTGCCCTGCACTGGCCGTCTACTGGGGGGATGGAAAGGG
CGGCTAAGGATAGGTTCTGAAAGTGGGCGCTGAAGAAGATGTAGCAGCAC
GGGATGTAGAGGGGTGGGGAACACTGGGGGTGCTCGGTGTTGCTGAAAAG
GGGGTGCGGGAGCGGTGGTAGCCTGCGAAACCTGAAAATGAGGAACCTGG
GGCAGAAGAGGTGGAGGGGCACCTGGGAGCTAAATGATCCAGACTCTGAC
AGATGTAACACCTTGTTGGAGTAGCATGACCTCTAACATGTAAATTGAAT
AAATAGTCATTGGTAACACCCCAGTTAGTCTGGGGGTTGTTAGCTAAAAA
CATCCTAAAGGCCTGGTCGTAAGCATACCAGGCTCGAAAATTATACTGTC
GTGCCAACTGGGTTATGTAAGTTTGGTAGGCGATAAGTTCTTGGGCCAGG
TAAGGCTTAAACTGGATCAATGTTTGGAAAAAGTTGGACCATGCCATGGT
CCATGAAGCAAAGTCTACTACTTTCTGTTTCTTCATTTTAGGAGTATCTA
AACAGTGAGCCTCACTGTTGGTGAGAGAAAATCTCTCTCCGTCAAAATTA
AAGGAAACTGTTGAAGATGCAGGCCTGCCAATGTTAGCAGggagtaaatt
ttcaaaattcacgaACTCACCATTGCGGATTTGTGTGATAACTCTGGCTG
GAACTGTAGGAAGGACGTTTGCTTGACTGTTGTTTGTATTCGGCTGTAGG
AAAGGATTCCCACATTGAGggttaccattttgaaattctgGAATTCCGTC
AGGGAAAACGACAGCTGGTGAGGTTGCTGTGGTGACGGGGGTTGAGTGAG
AGATATAGATGGATGTGGGTGTTGGTATATTTGACTTGTTGACGTTGTGC
TAGTCCTTCCTCTGTCGTTACCGAACAAGTTGCTGATCCTGCGATCTACA
ATACTATTTAAGAGAGTTGTAATGTTAACTGAAGGAGTTGACGCTGTTGT
TGGAACGACCCGTGGTAAAGGATTCAAGGACGACGGAANGAAGGAGTTGA
CGCTGTTGTTGGAACGGCCCGTGGTAAAGGATTCGAGGACGACGGAATTG
TTATCGGGACTGTTTGTTGTGAGTCTGTTGCTTGAGACGAAGCTGCAATG
TTCGAGGAGGCTGGAGTGTAGATTGGCAACCCAGTACCAGACGTTGATGG
TGCAGAAGAAGCCATATTTGTATGATATTAGAGtattaatttatattttt
caaagttaAGATGTTCATGTGTTGAAAGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAC
TCGAATGTGAATGAAATTTATCTGTGACGGGGATTTCTCTACTGTGGTTT
GAGTGTATAGCCAAAAGTCTGATACCGGAATAGTGCCCCGGGAGCCTGAG
AATGCGGAATAGGTTGACTTGTAATTAACATGAGTAAACGCGTTTACTCT
AAAAAATGTGTTGAAAACGCTGTAAAAATGGGTGATCAAAAGCTATTAAT
GAAATGTGCGTGGAATGGAACGACTGCGTCGACGACTAGTCAATGCTTTT
ACTTAAAAGGATtcgagaaagaaagaaatttgtaAGAGTGTAAAAGTAAG
CATGTAAAAAGGCTTGACTCTACAAGCCAAATTTAAGTGTTCACTAGTTT
CCTTCAAATTTTACAGAACTAGTTTTCCTGGTTTACACCCACTTTTTGTC
GAAATTTCCTTCCTTCGTTTTCGAGAATTTAAAGTAATAATTGCATTTCg
cggtagacacccaaaaacgcgaaaattagttccgtgAAAATTTAGCTCCC
TTAACAATTGACGAAGGACTGTCAAGATCCATCTCGACATTTTCTTTAGA
ATGTGACAGTCAACATTTCAAGCCAACACAAGGAAATGAAAAATGCACAC
AATGTGGCTTGAACTCACGTTCTAGTACTAATCGAGCTACATGTAATTGT
CTGCATAAATACAAACGAGAAGTTAGTGAAGCCAACAATCCTTTAGCTGT
CTGTTACAGTAAGTTTACGTCAATCTTTATCGTGCAAGACCTCCTAAaac
catttttagaaaattcacATGATCATTCATAATAAATCAATTTTACCTTT
CTCTAGAAATCCCAGATATTTCCTCAGCTATTGTCTTTCTAAACATAACC
AGTAGCTCAGTAGAAATCACTTGGTCACACCTATCACaagtcaacaaaac
aaatatttaCATTGTCGATTGCAATGATTGTCCCTCTGGTGTTTTACCTA
AAAGCACCACCAACAAATTTATTACCATCAATGGTCTTGGTTCGTTTGCT
GATTATGAAATTAGTGTGACTTTCTCGAGTGAAGTTTCAAGGATGATcgg
tgaaaatcaaacttcgGAATTTCAATCGTTCCAGACATTGCCTGGAGGTA
AGAAACATTCacaatcaaaagaattttcctAGGAAATGTTCAAAACCTTT
TTAGGGATATTGTTTTAACACtataaaatgaatttaaaatcagaaaagac
aTATAGTACTAAAATTCGCCAAGATAATTCTTTTTTCTATCCTACAGTTC
CCGGTAAAGTTCGAAATTTAATGCAAAAGAGCTTAGACAATGGTAAAGTT
GAATTGAGTTGGGATCCACCTTTTGCAAAAGGAAACAATATCATCACCTA
CTTATTGACATATGGAGGATCCACAAAGAAAACAACACTTACAACGCACA
TACTTGATCCTGATGTTGAAGAACAAACATTTTCAGTAGaagtaaaatga
aaaataatttatgacaATTAGGACTAACTTGTAGATTCACAATAATGTTG
CAGCACTTCTAGTCCTGTATTTAATGGAAATTTGAAGGCACTAGAGGTTT
TTCGCTCTTTTATTCAGTTTCTAGCGTTTAGGCCTATTTAGAACGGAGCT
CACGGTTagttttttcgactttttttcaaattttattccttttttataGA
TTGCAGCACAAGTATCAGTGGGTGGACAACTTTTGACTGGTGAATCAAgc
acttttaaagaaaaaattcacgTCAAAGGAGGAGCTGCTTTAGATATGGC
AATTGGTGTTGGTGTTGGCGTTGTTTTATTGGTTATCATTATTGGTATCG
TTGCGTTTTACATTTATCGCAAGAAAAATCTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001305XLOC_001305Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002426-exon-sc0000020-1491911889:220417..221424TCONS_00002426-exon-sc0000020-1491911889:220417..221424Clytia hemisphaericaexon
TCONS_00002426-exon-sc0000020-1510915933:220417..221424TCONS_00002426-exon-sc0000020-1510915933:220417..221424Clytia hemisphaericaexon
TCONS_00002426-exon-sc0000020-1575043694:220417..221424TCONS_00002426-exon-sc0000020-1575043694:220417..221424Clytia hemisphaericaexon
TCONS_00002426-exon-sc0000020-1491911889:233014..233207TCONS_00002426-exon-sc0000020-1491911889:233014..233207Clytia hemisphaericaexon
TCONS_00002426-exon-sc0000020-1510915933:233014..233207TCONS_00002426-exon-sc0000020-1510915933:233014..233207Clytia hemisphaericaexon
TCONS_00002426-exon-sc0000020-1575043694:233014..233207TCONS_00002426-exon-sc0000020-1575043694:233014..233207Clytia hemisphaericaexon
TCONS_00002426-exon-sc0000020-1491911889:233416..233601TCONS_00002426-exon-sc0000020-1491911889:233416..233601Clytia hemisphaericaexon
TCONS_00002426-exon-sc0000020-1510915933:233416..233601TCONS_00002426-exon-sc0000020-1510915933:233416..233601Clytia hemisphaericaexon
TCONS_00002426-exon-sc0000020-1575043694:233416..233601TCONS_00002426-exon-sc0000020-1575043694:233416..233601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:220417..233601 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.072494	0.086864	0.2343	0	0	0	0.398513	0.306713	0.145434	0	0	0	0	1.01404	0.298394	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002426 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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