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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002395 ID=TCONS_00002395|Name=TCONS_00002395|organism=Clytia hemisphaerica|type=transcript|length=2658bp
CatgcaatagcttctttttaAGTGACGTCAATATTTCCGTCAAAAAGTTC
AAGATCGAATTTACGACGATGGTGACATTTCGCCATGATTTCAGAACGTT
TGCTCAGAAGATAGatgccagtagcagaataaaaaaagtgtctttttttt
ctggctgacATCGCTCTACTTATGTATCGAGCACTGTAAAAGACTTATTA
TTtatcaaagaaaaagtaataactttcacgacttttgaattaagacgaaa
aggattgtgggattgactTTTTGTCAAATGAGACTTGATACTTGCATAAC
AAAGCGCTATTAGTCATTTTTTCTCGGTTTTAATAAATTCCATTGTTCAA
TCCATCATCAAAAGTGAAATGAATAAAATACCATCTGATAGAAATGCAAT
AGAATTTAGAGCTAAGGCGTTTCATACGTATTCCAATGTGACAACTGTCA
AGGTAGGATGTTGAAGTTAATTGTagctttttggattttaagtATCGTGC
AAGCTGATTTCGTTAACACAGCTAACAAGGAAAATGATCCGCTTTTTATT
GCTAACTTCTTCCGAAAAAACAAGAAGCCTGTCTACCCTGAGGTTCCTTA
TGCTGGCAGTGATGATAGGAAAATCAATCTCATTAATCTAGCCAAAATCA
AGGGCTCTTATTATTTACATGAGATTATGAAAGAAAGTGGCTTGGGTGTT
TACAAATTGAGACTGTTTGAAGACCGTGTTATTCTCGCAGATCCTATAGC
TATCCATGTTATATATAATCCAAAATtggttgaaaaatcaaaagactttg
gTCTTGCTACTGTAAATGGTCTCAATATGAGAGGATATCTTCCATCAGCT
TCTGTTAATGGAATTAAAAAGATCAGGAAGAAGTTAGGGATGCTGAGGAT
TTTGAAATCGGCTGAGAAAAAATATGGTATTGAAGGTTTGTTTAAGATTC
TAAAGAAACATTGGGACTTTGTTCTTCCTCTTATTAAGAACAACCAAACG
AACGTTGATGATCTGATCCATGTGATAACAGTACGTACATTGACTGAATA
TTTCTTTGATAAACCTTTTGATTTGGATCTCAAAGTCTACGTGATTTGGT
TTTTAAGAGGATTAACACCCAAAAATGATCCAAACCAAAAACTTGATGAT
CTTGGAAAAAAAGTGACTGAACAAATGTATTCTTACATTGACAGTACACC
TTGGGCAAAAAATCATTTACCCAGACTTTTAAGGTGGGACAAAAGGAAAA
ACAGAGAAACATTAAAAAGTGAAGCATTATTTTTCGCTTTCATTTTTTCT
GCTTTTGGATTAAGAAGTGCTATAGCTTCGACAGTTCCTCTTTACTTAAA
CCTGGATAAAGCAACAAAGTCAATTATACTAAAGGAAGTCAACACTTTCC
ATGAAGCTAATGGTAAATCTATGGACGAAAAGTTGGAAGATTTTTTCATC
ACTGATCGCTTTGTTACTGAGGTGTTCCGCTTTTTACCCCCTGTTACTCA
AGTCTTTGGTCGAGCTCGCAAAGATTTCACATTAGATTCCTTGCAAGGAA
GATACACTGTGAAAAAAGGAACATACCTGACCGGTTATCCATACGGTGCA
CAGAGAGATCCGTATACTTTCCGTTTACCTAATTTATTCACCACCACTGG
TGACCAGTCCCAAGTCAAAGAGAATTTCTTCGCTTTTGGGGGCCCTTACT
ACCAGAAAGCACGTGTTCACAACCGAAAATGTTTGGGTCAAGAAATCTCT
TTGAATATGGCAAAAATGTTTGTTGCATTGTTCGCAAGGTGTGACATTGA
AGCTGTTTCTAGTTTAAAATTCACCGAATCTAATCCACAACGAGTCATTG
CTAGTGATGAACCGTTAAAAGTTAATAAATTTAAATgctaaaaaaaactg
catcctaAATTTTAGTGTTCTTATTTACTGGTATAAGACAAAAAAAGAAC
ACCGCATTTTGAGGGATAATTTGTCTTTATAacttagttttatttttttt
gtcataattttttttgattatcATTTTACGACTCTTTACGACCCTACGAC
TTGTAAAAACTCGATTTTTTTCAACAAGTTAGATCATTTGGTATGTAGCT
GATCATTGTACGCAAGAAACTTAAAGTACTACCAaaatgaagttttgaat
ttttgttttgtaaattaGTTTCATCTATATATTACGTTTGTATTTTTGGG
GTCatattgtttttgtgtttttggggtgcattttgattttagggtttttt
tattttgttgtattAACGAGAGGTCTTGTTTTATTTTCGGGTAGTCTTTG
TAACAAATATAGTGGGTtttatatctaaaaatatttcaattaatttttgt
tGATTACAATCTTCACTCAATTTTATATAATCTGACAGTGCTTTGAAAGG
TTGGTCATACTTACACGCCTTTTTATAATCAGTTATGCTATAAGGTGAGT
GAGtatatactttatttttttttaagaaacgtcttttataagaacatcaa
agatttttaaagcctttcggatgttcttaactttccgaatttaaagccta
aaaatgtgagtatttttatccataataaaggtttaagagtcctcaaagcc
ttatgttctttatttgttcttaatattttggctatcgaaggcttatgttc
ttatatag Run BLAST on NCBI protein sequence of TCONS_00002395-protein >TCONS_00002395-protein ID=TCONS_00002395-protein|Name=TCONS_00002395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
MLKLIVAFWILSIVQADFVNTANKENDPLFIANFFRKNKKPVYPEVPYAG
SDDRKINLINLAKIKGSYYLHEIMKESGLGVYKLRLFEDRVILADPIAIH
VIYNPKLVEKSKDFGLATVNGLNMRGYLPSASVNGIKKIRKKLGMLRILK
SAEKKYGIEGLFKILKKHWDFVLPLIKNNQTNVDDLIHVITVRTLTEYFF
DKPFDLDLKVYVIWFLRGLTPKNDPNQKLDDLGKKVTEQMYSYIDSTPWA
KNHLPRLLRWDKRKNRETLKSEALFFAFIFSAFGLRSAIASTVPLYLNLD
KATKSIILKEVNTFHEANGKSMDEKLEDFFITDRFVTEVFRFLPPVTQVF
GRARKDFTLDSLQGRYTVKKGTYLTGYPYGAQRDPYTFRLPNLFTTTGDQ
SQVKENFFAFGGPYYQKARVHNRKCLGQEISLNMAKMFVALFARCDIEAV
SSLKFTESNPQRVIASDEPLKVNKFKC Run BLAST on NCBI transcript from alignment at sc0000019:620493..623150 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002395 ID=TCONS_00002395|Name=TCONS_00002395|organism=Clytia hemisphaerica|type=transcript|length=2658bp|location=Sequence derived from alignment at sc0000019:620493..623150 (Clytia hemisphaerica)
ctatataagaacataagccttcgatagccaaaatattaagaacaaataaa
gaacataaggctttgaggactcttaaacctttattatggataaaaatact
cacatttttaggctttaaattcggaaagttaagaacatccgaaaggcttt
aaaaatctttgatgttcttataaaagacgtttcttaaaaaaaaataaagt
atataCTCACTCACCTTATAGCATAACTGATTATAAAAAGGCGTGTAAGT
ATGACCAACCTTTCAAAGCACTGTCAGATTATATAAAATTGAGTGAAGAT
TGTAATCaacaaaaattaattgaaatatttttagatataaaACCCACTAT
ATTTGTTACAAAGACTACCCGAAAATAAAACAAGACCTCTCGTTaataca
acaaaataaaaaaaccctaaaatcaaaatgcaccccaaaaacacaaaaac
aatatGACCCCAAAAATACAAACGTAATATATAGATGAAACtaatttaca
aaacaaaaattcaaaacttcatttTGGTAGTACTTTAAGTTTCTTGCGTA
CAATGATCAGCTACATACCAAATGATCTAACTTGTTGAAAAAAATCGAGT
TTTTACAAGTCGTAGGGTCGTAAAGAGTCGTAAAATgataatcaaaaaaa
attatgacaaaaaaaataaaactaagtTATAAAGACAAATTATCCCTCAA
AATGCGGTGTTCTTTTTTTGTCTTATACCAGTAAATAAGAACACTAAAAT
TtaggatgcagttttttttagcATTTAAATTTATTAACTTTTAACGGTTC
ATCACTAGCAATGACTCGTTGTGGATTAGATTCGGTGAATTTTAAACTAG
AAACAGCTTCAATGTCACACCTTGCGAACAATGCAACAAACATTTTTGCC
ATATTCAAAGAGATTTCTTGACCCAAACATTTTCGGTTGTGAACACGTGC
TTTCTGGTAGTAAGGGCCCCCAAAAGCGAAGAAATTCTCTTTGACTTGGG
ACTGGTCACCAGTGGTGGTGAATAAATTAGGTAAACGGAAAGTATACGGA
TCTCTCTGTGCACCGTATGGATAACCGGTCAGGTATGTTCCTTTTTTCAC
AGTGTATCTTCCTTGCAAGGAATCTAATGTGAAATCTTTGCGAGCTCGAC
CAAAGACTTGAGTAACAGGGGGTAAAAAGCGGAACACCTCAGTAACAAAG
CGATCAGTGATGAAAAAATCTTCCAACTTTTCGTCCATAGATTTACCATT
AGCTTCATGGAAAGTGTTGACTTCCTTTAGTATAATTGACTTTGTTGCTT
TATCCAGGTTTAAGTAAAGAGGAACTGTCGAAGCTATAGCACTTCTTAAT
CCAAAAGCAGAAAAAATGAAAGCGAAAAATAATGCTTCACTTTTTAATGT
TTCTCTGTTTTTCCTTTTGTCCCACCTTAAAAGTCTGGGTAAATGATTTT
TTGCCCAAGGTGTACTGTCAATGTAAGAATACATTTGTTCAGTCACTTTT
TTTCCAAGATCATCAAGTTTTTGGTTTGGATCATTTTTGGGTGTTAATCC
TCTTAAAAACCAAATCACGTAGACTTTGAGATCCAAATCAAAAGGTTTAT
CAAAGAAATATTCAGTCAATGTACGTACTGTTATCACATGGATCAGATCA
TCAACGTTCGTTTGGTTGTTCTTAATAAGAGGAAGAACAAAGTCCCAATG
TTTCTTTAGAATCTTAAACAAACCTTCAATACCATATTTTTTCTCAGCCG
ATTTCAAAATCCTCAGCATCCCTAACTTCTTCCTGATCTTTTTAATTCCA
TTAACAGAAGCTGATGGAAGATATCCTCTCATATTGAGACCATTTACAGT
AGCAAGAccaaagtcttttgatttttcaaccaATTTTGGATTATATATAA
CATGGATAGCTATAGGATCTGCGAGAATAACACGGTCTTCAAACAGTCTC
AATTTGTAAACACCCAAGCCACTTTCTTTCATAATCTCATGTAAATAATA
AGAGCCCTTGATTTTGGCTAGATTAATGAGATTGATTTTCCTATCATCAC
TGCCAGCATAAGGAACCTCAGGGTAGACAGGCTTCTTGTTTTTTCGGAAG
AAGTTAGCAATAAAAAGCGGATCATTTTCCTTGTTAGCTGTGTTAACGAA
ATCAGCTTGCACGATacttaaaatccaaaaagctACAATTAACTTCAACA
TCCTACCTTGACAGTTGTCACATTGGAATACGTATGAAACGCCTTAGCTC
TAAATTCTATTGCATTTCTATCAGATGGTATTTTATTCATTTCACTTTTG
ATGATGGATTGAACAATGGAATTTATTAAAACCGAGAAAAAATGACTAAT
AGCGCTTTGTTATGCAAGTATCAAGTCTCATTTGACAAAAagtcaatccc
acaatccttttcgtcttaattcaaaagtcgtgaaagttattactttttct
ttgataAATAATAAGTCTTTTACAGTGCTCGATACATAAGTAGAGCGATg
tcagccagaaaaaaaagacactttttttattctgctactggcatCTATCT
TCTGAGCAAACGTTCTGAAATCATGGCGAAATGTCACCATCGTCGTAAAT
TCGATCTTGAACTTTTTGACGGAAATATTGACGTCACTtaaaaagaagct
attgcatG Coding sequence (CDS) from alignment at sc0000019:620493..623150 >TCONS_00002395 ID=TCONS_00002395|Name=TCONS_00002395|organism=Clytia hemisphaerica|type=CDS|length=1434bp|location=Sequence derived from alignment at sc0000019:620493..623150 (Clytia hemisphaerica)
ttagcATTTAAATTTATTAACTTTTAACGGTTCATCACTAGCAATGACTC
GTTGTGGATTAGATTCGGTGAATTTTAAACTAGAAACAGCTTCAATGTCA
CACCTTGCGAACAATGCAACAAACATTTTTGCCATATTCAAAGAGATTTC
TTGACCCAAACATTTTCGGTTGTGAACACGTGCTTTCTGGTAGTAAGGGC
CCCCAAAAGCGAAGAAATTCTCTTTGACTTGGGACTGGTCACCAGTGGTG
GTGAATAAATTAGGTAAACGGAAAGTATACGGATCTCTCTGTGCACCGTA
TGGATAACCGGTCAGGTATGTTCCTTTTTTCACAGTGTATCTTCCTTGCA
AGGAATCTAATGTGAAATCTTTGCGAGCTCGACCAAAGACTTGAGTAACA
GGGGGTAAAAAGCGGAACACCTCAGTAACAAAGCGATCAGTGATGAAAAA
ATCTTCCAACTTTTCGTCCATAGATTTACCATTAGCTTCATGGAAAGTGT
TGACTTCCTTTAGTATAATTGACTTTGTTGCTTTATCCAGGTTTAAGTAA
AGAGGAACTGTCGAAGCTATAGCACTTCTTAATCCAAAAGCAGAAAAAAT
GAAAGCGAAAAATAATGCTTCACTTTTTAATGTTTCTCTGTTTTTCCTTT
TGTCCCACCTTAAAAGTCTGGGTAAATGATTTTTTGCCCAAGGTGTACTG
TCAATGTAAGAATACATTTGTTCAGTCACTTTTTTTCCAAGATCATCAAG
TTTTTGGTTTGGATCATTTTTGGGTGTTAATCCTCTTAAAAACCAAATCA
CGTAGACTTTGAGATCCAAATCAAAAGGTTTATCAAAGAAATATTCAGTC
AATGTACGTACTGTTATCACATGGATCAGATCATCAACGTTCGTTTGGTT
GTTCTTAATAAGAGGAAGAACAAAGTCCCAATGTTTCTTTAGAATCTTAA
ACAAACCTTCAATACCATATTTTTTCTCAGCCGATTTCAAAATCCTCAGC
ATCCCTAACTTCTTCCTGATCTTTTTAATTCCATTAACAGAAGCTGATGG
AAGATATCCTCTCATATTGAGACCATTTACAGTAGCAAGAccaaagtctt
ttgatttttcaaccaATTTTGGATTATATATAACATGGATAGCTATAGGA
TCTGCGAGAATAACACGGTCTTCAAACAGTCTCAATTTGTAAACACCCAA
GCCACTTTCTTTCATAATCTCATGTAAATAATAAGAGCCCTTGATTTTGG
CTAGATTAATGAGATTGATTTTCCTATCATCACTGCCAGCATAAGGAACC
TCAGGGTAGACAGGCTTCTTGTTTTTTCGGAAGAAGTTAGCAATAAAAAG
CGGATCATTTTCCTTGTTAGCTGTGTTAACGAAATCAGCTTGCACGATac
ttaaaatccaaaaagctACAATTAACTTCAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002395-exon-sc0000019-1491911889:620493..623150 | TCONS_00002395-exon-sc0000019-1491911889:620493..623150 | Clytia hemisphaerica | exon |
| TCONS_00002395-exon-sc0000019-1510915933:620493..623150 | TCONS_00002395-exon-sc0000019-1510915933:620493..623150 | Clytia hemisphaerica | exon |
| TCONS_00002395-exon-sc0000019-1575043694:620493..623150 | TCONS_00002395-exon-sc0000019-1575043694:620493..623150 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:620493..623150 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001128 | Cyt_P450 |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
The following BLAST results are available for this feature:
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