TCONS_00002386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002386
Unique NameTCONS_00002386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length338

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002386 ID=TCONS_00002386|Name=TCONS_00002386|organism=Clytia hemisphaerica|type=transcript|length=338bp
ACGGCGGTTCGGTTCTCTCAGAAACCTCGACAGCCGTCTGGTAACCTTGA
CGGCGGTCTGGTTACCTCGACGGCGGCTTGGTTTCAACCCTAAAAGTGTC
TCAGGTCGGGTCCTACTCAAGGGAGTCACTTCTTTGAGGGAATTTCGAAC
GGCGGTTCGGTTCTCTCAGAAACCTTGACGGCGGTCTGGTTTCAACCCTA
AAAGTGTCTCAGGTCGGGTCCTACTCAAGGGAGTCACTTCTTTGAGGGAA
TTTCGAACGGCGGTTCGGTTCTCTCAGAAACCTTGACGGCGGTCTGGTTT
CAACCCTAAAAGTGTCTCAGGTCCGGTCCTACTCAAAG
Run BLAST on NCBI

transcript from alignment at sc0000019:532993..533330

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002386 ID=TCONS_00002386|Name=TCONS_00002386|organism=Clytia hemisphaerica|type=transcript|length=338bp|location=Sequence derived from alignment at sc0000019:532993..533330 (Clytia hemisphaerica)
CTTTGAGTAGGACCGGACCTGAGACACTTTTAGGGTTGAAACCAGACCGC
CGTCAAGGTTTCTGAGAGAACCGAACCGCCGTTCGAAATTCCCTCAAAGA
AGTGACTCCCTTGAGTAGGACCCGACCTGAGACACTTTTAGGGTTGAAAC
CAGACCGCCGTCAAGGTTTCTGAGAGAACCGAACCGCCGTTCGAAATTCC
CTCAAAGAAGTGACTCCCTTGAGTAGGACCCGACCTGAGACACTTTTAGG
GTTGAAACCAAGCCGCCGTCGAGGTAACCAGACCGCCGTCAAGGTTACCA
GACGGCTGTCGAGGTTTCTGAGAGAACCGAACCGCCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001273XLOC_001273Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002386-exon-sc0000019-1491911889:532993..533330TCONS_00002386-exon-sc0000019-1491911889:532993..533330Clytia hemisphaericaexon
TCONS_00002386-exon-sc0000019-1510915933:532993..533330TCONS_00002386-exon-sc0000019-1510915933:532993..533330Clytia hemisphaericaexon
TCONS_00002386-exon-sc0000019-1575043694:532993..533330TCONS_00002386-exon-sc0000019-1575043694:532993..533330Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:532993..533330 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.446136	1.42302	0	0	0	0	0	7.66766	7.90784	5.92223	11.4613	12.3226	11.9375	16.0019	20.0003	17.63	13.4636	3.22377	4.17845	9.13411	13.2806	1.59917	4.24741	0	1.90624	4.06596	2.14259	5.41587	4.52955
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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