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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002362 ID=TCONS_00002362|Name=TCONS_00002362|organism=Clytia hemisphaerica|type=transcript|length=861bp
GTTTGGTTGCAGGTATCTAAACAAATCTACTTTTACATTCGTAGGAGCAG
GTTTTCCATTGACTGGGATCATACTACATATTGAAACAGGTGCATCAATC
AACTTGATTGATCGAGACGAAAACGCTGTGTTGACAGCACGAAAGTTCCT
ATCATTGCTTGAAGAACTTGGTATCGTTAGACAAGGAGCAATTAATGTTA
TCCGTGCAGATGCAACTGATGTTCTTTACCTACCTAAAAACTTGATCCAT
GAAAAAGACACATTATCCAGTAAAGTCATAGTTCAAACTGATATATTAGA
TCTAGCCAGTGCTCTACCTGCTGAAACAACAGCCAAAGTGTTAAAGGAAA
ATGCATCCAAAGTCCCTTTAATCCGCAAACGAAATGTTAGAGGAATGTCA
GAAATCTGGTATGAAAGATTTATTTTGCCAAAAGGCAATGATTTTAAGCT
TGTTGGCGAAGTCACTCCCCCGCAAAGTGTAGTGAATCAGGCAACACCCT
CAAACCTTGTTGTAGGCTTAACATCCCCAATCAATATCAACTCATGTCAG
TTGTATGTTAACACATCAAATTCTGACTCTAAGCTTGCATATCTTGAGAA
AATGCATAGTTTATGGCACTTGGACAATAATGGTATCGGGAATGTGGTAT
TGGATGACAAGATCAAACAGTTTTATGAAGGGTGAAGTTAAAAAATCCCA
AGGGATGAAAGATAAGAAGAGAGATGGAAAGACCTGAGTGAGATCAGgac
atcaaaattacaaaattaaatattactgTCTGACTCGAACCTCATTATGA
GgtaaaaccgcttttttatcagATATTGTCCAATCCACCTTTTGAAGCAG
TTACTTTCAGC Run BLAST on NCBI protein sequence of TCONS_00002362-protein >TCONS_00002362-protein ID=TCONS_00002362-protein|Name=TCONS_00002362-protein|organism=Clytia hemisphaerica|type=polypeptide|length=227bp
FGCRYLNKSTFTFVGAGFPLTGIILHIETGASINLIDRDENAVLTARKFL
SLLEELGIVRQGAINVIRADATDVLYLPKNLIHEKDTLSSKVIVQTDILD
LASALPAETTAKVLKENASKVPLIRKRNVRGMSEIWYERFILPKGNDFKL
VGEVTPPQSVVNQATPSNLVVGLTSPININSCQLYVNTSNSDSKLAYLEK
MHSLWHLDNNGIGNVVLDDKIKQFYEG Run BLAST on NCBI transcript from alignment at sc0000019:77261..78121 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002362 ID=TCONS_00002362|Name=TCONS_00002362|organism=Clytia hemisphaerica|type=transcript|length=861bp|location=Sequence derived from alignment at sc0000019:77261..78121 (Clytia hemisphaerica)
GCTGAAAGTAACTGCTTCAAAAGGTGGATTGGACAATATctgataaaaaa
gcggttttacCTCATAATGAGGTTCGAGTCAGAcagtaatatttaatttt
gtaattttgatgtcCTGATCTCACTCAGGTCTTTCCATCTCTCTTCTTAT
CTTTCATCCCTTGGGATTTTTTAACTTCACCCTTCATAAAACTGTTTGAT
CTTGTCATCCAATACCACATTCCCGATACCATTATTGTCCAAGTGCCATA
AACTATGCATTTTCTCAAGATATGCAAGCTTAGAGTCAGAATTTGATGTG
TTAACATACAACTGACATGAGTTGATATTGATTGGGGATGTTAAGCCTAC
AACAAGGTTTGAGGGTGTTGCCTGATTCACTACACTTTGCGGGGGAGTGA
CTTCGCCAACAAGCTTAAAATCATTGCCTTTTGGCAAAATAAATCTTTCA
TACCAGATTTCTGACATTCCTCTAACATTTCGTTTGCGGATTAAAGGGAC
TTTGGATGCATTTTCCTTTAACACTTTGGCTGTTGTTTCAGCAGGTAGAG
CACTGGCTAGATCTAATATATCAGTTTGAACTATGACTTTACTGGATAAT
GTGTCTTTTTCATGGATCAAGTTTTTAGGTAGGTAAAGAACATCAGTTGC
ATCTGCACGGATAACATTAATTGCTCCTTGTCTAACGATACCAAGTTCTT
CAAGCAATGATAGGAACTTTCGTGCTGTCAACACAGCGTTTTCGTCTCGA
TCAATCAAGTTGATTGATGCACCTGTTTCAATATGTAGTATGATCCCAGT
CAATGGAAAACCTGCTCCTACGAATGTAAAAGTAGATTTGTTTAGATACC
TGCAACCAAAC Coding sequence (CDS) from alignment at sc0000019:77261..78121 >TCONS_00002362 ID=TCONS_00002362|Name=TCONS_00002362|organism=Clytia hemisphaerica|type=CDS|length=684bp|location=Sequence derived from alignment at sc0000019:77261..78121 (Clytia hemisphaerica)
TCACCCTTCATAAAACTGTTTGATCTTGTCATCCAATACCACATTCCCGA
TACCATTATTGTCCAAGTGCCATAAACTATGCATTTTCTCAAGATATGCA
AGCTTAGAGTCAGAATTTGATGTGTTAACATACAACTGACATGAGTTGAT
ATTGATTGGGGATGTTAAGCCTACAACAAGGTTTGAGGGTGTTGCCTGAT
TCACTACACTTTGCGGGGGAGTGACTTCGCCAACAAGCTTAAAATCATTG
CCTTTTGGCAAAATAAATCTTTCATACCAGATTTCTGACATTCCTCTAAC
ATTTCGTTTGCGGATTAAAGGGACTTTGGATGCATTTTCCTTTAACACTT
TGGCTGTTGTTTCAGCAGGTAGAGCACTGGCTAGATCTAATATATCAGTT
TGAACTATGACTTTACTGGATAATGTGTCTTTTTCATGGATCAAGTTTTT
AGGTAGGTAAAGAACATCAGTTGCATCTGCACGGATAACATTAATTGCTC
CTTGTCTAACGATACCAAGTTCTTCAAGCAATGATAGGAACTTTCGTGCT
GTCAACACAGCGTTTTCGTCTCGATCAATCAAGTTGATTGATGCACCTGT
TTCAATATGTAGTATGATCCCAGTCAATGGAAAACCTGCTCCTACGAATG
TAAAAGTAGATTTGTTTAGATACCTGCAACCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002362-exon-sc0000019-1491911889:77261..78121 | TCONS_00002362-exon-sc0000019-1491911889:77261..78121 | Clytia hemisphaerica | exon |
| TCONS_00002362-exon-sc0000019-1510915933:77261..78121 | TCONS_00002362-exon-sc0000019-1510915933:77261..78121 | Clytia hemisphaerica | exon |
| TCONS_00002362-exon-sc0000019-1575043694:77261..78121 | TCONS_00002362-exon-sc0000019-1575043694:77261..78121 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:77261..78121 . |
Blast
The following BLAST results are available for this feature:
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