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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002304 ID=TCONS_00002304|Name=TCONS_00002304|organism=Clytia hemisphaerica|type=transcript|length=2026bp
tatatatattttttttcatttgctttcGAGAGATAATGGTGTTTTTCCGT
CCGCACCCAATTTTCGGTGGTGTCCGCCGACAAAACCCAGTGGGGGTGCA
CCTACTGGGAAACCACACGTTCCAGGGTTTTAGCTCCCCAATGAATTTTT
TCCGTTTAATGTCGCTTCTTGTGATGCAGGCACCAGACGACATTACCGAG
TCTGAGGAGGACCATACGGCGAACATCATCGGATCCTTGACTTGGGAAGC
AAACTTCCTAGAGTCAAGGATCATGATGTACGAAGAACTCCTCCTTCCCC
TACTTGCCCAGATGTGCGACTCCACCGAGTTTGATGTGCGGCAAGTATTG
TTCAGGATCTGGACGGATCGTCTTGACATGGCGGTAGTCACCGCCCGGGT
CCTGACCGATAGGTTAAACACCAGGTTGTTCAGTGAGGTCCGTCTGCGAA
GGCGGCAGAGTGCTTCGGATGCCCTTAGTTTGGATGGAAGGTTAGTGCGT
CGTATCCGTAGATATTTGGAACGTGGGATCCCTCACGGGAGAAGACGTCC
CAATCCGATGGATACGGTCGACTAAGGGGTCCAGGCACTCTACCTGAAAT
TAAACATATgctttcaagtttttcaagagatttttaaatttgaccttttC
TCAGTATCTTTcaggaatttttttatgaaaaaagaagCAATGACGTACAA
GGTAAATTATGCAAACTCCGTAAGTATTCTAAAAGTACCGCAGGCATCGT
TCCGCCTTGCCTGTCTTGCCTGTATTTTTTTATCCCTAAATTCACAATCa
atcttcagttttttttttagaaacagatTCCACTGTAACAAaggtcaact
tgctttctttcttaaaatttttttcttgttaaacTTTCATCTGAATGAGG
TCTGAAATTCGAGTTCTCTTCTTATCGGGTCGGAATTTAAAGGTGTAGAA
AGTTctataaaaaatcatttcatttttaaaggaaagagaGANTCGAGTTC
TCTTCTTATCGGGTCGGAATTTAAAGGTGTAGAAAGTTCTATAAAAAATC
GTTTCATTTTTAAaggagagagagaaaaaaaaaaagggaaacGAGAAATT
CGAAGTTGGGACTGCACTCcgtattaaatttttattttatattctatGTT
GAATTaacgatttttttttatatatatttatagTATTTGCATAGGGATTG
AAGAAGACAACACGAGAAACGCCACAANTTATTTTAATTTCTAGGTTGAA
TTAAcgattttttatatatatttatagTATTTGCATAGGGATTGAAGAAG
ACAACACAAGAAACGCCACAAACCAATCCTTAGTCTCCCTGAAACCAGAC
CTAAAACCCCTAAAACCAGAACCCAAGAGACCTATGCCCCTCCCTGCGGT
AGCTACTCATCTTCACCCATCCAACCAACACTTCTACAAACAACTGACTA
CCCAAAATGGCAACCAACACCACCAACGCCAAGGGAAACCTGAATCTGCT
GACCTACTAAATATGACCACCAAAGGAGAAACAAAGAGACTGGTGGCTGA
GAAGACACACCAAACAAcctcaaaacaaacaaataaacttTTAACGCCTG
CTAAACCACCACCACAGGCAGCTGGGGATGACACCACTACCAGTCATCCA
CTATCATCAAGCCACCAGTATTAGTGGAACCTGCTATTTCCGCTACCACC
ATAATCACCCCAGAAAGTATCCCAAGGTCAGCAGAAGATGATCCATCCAC
CAACAACTGAGAAGCACAAGACCTGTCCTGAAGAGTGGCTACCCCCGACC
AATCTCCGATCCCCCCAAGCAAAGATGGAAGAAGTGTCAAGTTTaggaaa
tttttattatttttattattttattagtcAGCCCTGAGCAGGGAACACCT
CCAAAGAAAACGCGACCCCACATAGCCATTTAAGGTCGGAGGAATGTACT
AAAGTTCCTTCGGCTATACCTTTACTGATCGTATCTAGCGCCCTTCTAAC
GCCCAACTACGCCTTCCACGCTCCNN Run BLAST on NCBI transcript from alignment at sc0000019:403894..405919- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002304 ID=TCONS_00002304|Name=TCONS_00002304|organism=Clytia hemisphaerica|type=transcript|length=2026bp|location=Sequence derived from alignment at sc0000019:403894..405919- (Clytia hemisphaerica)
TATATATATTTTTTTTCATTTGCTTTCGAGAGATAATGGTGTTTTTCCGT
CCGCACCCAATTTTCGGTGGTGTCCGCCGACAAAACCCAGTGGGGGTGCA
CCTACTGGGAAACCACACGTTCCAGGGTTTTAGCTCCCCAATGAATTTTT
TCCGTTTAATGTCGCTTCTTGTGATGCAGGCACCAGACGACATTACCGAG
TCTGAGGAGGACCATACGGCGAACATCATCGGATCCTTGACTTGGGAAGC
AAACTTCCTAGAGTCAAGGATCATGATGTACGAAGAACTCCTCCTTCCCC
TACTTGCCCAGATGTGCGACTCCACCGAGTTTGATGTGCGGCAAGTATTG
TTCAGGATCTGGACGGATCGTCTTGACATGGCGGTAGTCACCGCCCGGGT
CCTGACCGATAGGTTAAACACCAGGTTGTTCAGTGAGGTCCGTCTGCGAA
GGCGGCAGAGTGCTTCGGATGCCCTTAGTTTGGATGGAAGGTTAGTGCGT
CGTATCCGTAGATATTTGGAACGTGGGATCCCTCACGGGAGAAGACGTCC
CAATCCGATGGATACGGTCGACTAAGGGGTCCAGGCACTCTACCTGAAAT
TAAACATATGCTTTCAAGTTTTTCAAGAGATTTTTAAATTTGACCTTTTC
TCAGTATCTTTCAGGAATTTTTTTATGAAAAAAGAAGCAATGACGTACAA
GGTAAATTATGCAAACTCCGTAAGTATTCTAAAAGTACCGCAGGCATCGT
TCCGCCTTGCCTGTCTTGCCTGTATTTTTTTATCCCTAAATTCACAATCA
ATCTTCAGTTTTTTTTTTAGAAACAGATTCCACTGTAACAAAGGTCAACT
TGCTTTCTTTCTTAAAATTTTTTTCTTGTTAAACTTTCATCTGAATGAGG
TCTGAAATTCGAGTTCTCTTCTTATCGGGTCGGAATTTAAAGGTGTAGAA
AGTTCTATAAAAAATCATTTCATTTTTAAAGGAAAGAGAGANTCGAGTTC
TCTTCTTATCGGGTCGGAATTTAAAGGTGTAGAAAGTTCTATAAAAAATC
GTTTCATTTTTAAAGGAGAGAGAGAAAAAAAAAAAGGGAAACGAGAAATT
CGAAGTTGGGACTGCACTCCGTATTAAATTTTTATTTTATATTCTATGTT
GAATTAACGATTTTTTTTTATATATATTTATAGTATTTGCATAGGGATTG
AAGAAGACAACACGAGAAACGCCACAANTTATTTTAATTTCTAGGTTGAA
TTAACGATTTTTTATATATATTTATAGTATTTGCATAGGGATTGAAGAAG
ACAACACAAGAAACGCCACAAACCAATCCTTAGTCTCCCTGAAACCAGAC
CTAAAACCCCTAAAACCAGAACCCAAGAGACCTATGCCCCTCCCTGCGGT
AGCTACTCATCTTCACCCATCCAACCAACACTTCTACAAACAACTGACTA
CCCAAAATGGCAACCAACACCACCAACGCCAAGGGAAACCTGAATCTGCT
GACCTACTAAATATGACCACCAAAGGAGAAACAAAGAGACTGGTGGCTGA
GAAGACACACCAAACAACCTCAAAACAAACAAATAAACTTTTAACGCCTG
CTAAACCACCACCACAGGCAGCTGGGGATGACACCACTACCAGTCATCCA
CTATCATCAAGCCACCAGTATTAGTGGAACCTGCTATTTCCGCTACCACC
ATAATCACCCCAGAAAGTATCCCAAGGTCAGCAGAAGATGATCCATCCAC
CAACAACTGAGAAGCACAAGACCTGTCCTGAAGAGTGGCTACCCCCGACC
AATCTCCGATCCCCCCAAGCAAAGATGGAAGAAGTGTCAAGTTTAGGAAA
TTTTTATTATTTTTATTATTTTATTAGTCAGCCCTGAGCAGGGAACACCT
CCAAAGAAAACGCGACCCCACATAGCCATTTAAGGTCGGAGGAATGTACT
AAAGTTCCTTCGGCTATACCTTTACTGATCGTATCTAGCGCCCTTCTAAC
GCCCAACTACGCCTTCCACGCTCCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002304-exon-sc0000019-1575043694:403894..405919 | TCONS_00002304-exon-sc0000019-1575043694:403894..405919 | Clytia hemisphaerica | exon |
| TCONS_00002304-exon-sc0000019-1510915933:403894..405919 | TCONS_00002304-exon-sc0000019-1510915933:403894..405919 | Clytia hemisphaerica | exon |
| TCONS_00002304-exon-sc0000019-1491911889:403894..405919 | TCONS_00002304-exon-sc0000019-1491911889:403894..405919 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:403894..405919 - |
Blast
The following BLAST results are available for this feature:
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