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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002303 ID=TCONS_00002303|Name=TCONS_00002303|organism=Clytia hemisphaerica|type=transcript|length=1436bp
ttcatttgctttcGAGAGATAATGGTGTTTTTCCGTCCGCACCCAATTTT
CGGTGGTGTCCGCCGACAAAACCCAGTGGGGGTGCACCTACTGGGAAACC
ACACGTTCCAGGGTTTTAGCTCCCCAATGAATTTTTTCCGTTTAATGTCG
CTTCTTGTGATGCAGGCACCAGACGACATTACCGAGTCTGAGGAGGACCA
TACGGCGAACATCATCGGATCCTTGACTTGGGAAGCAAACTTCCTAGAGT
CAAGGATCATGATGTACGAAGAACTCCTCCTTCCCCTACTTGCCCAGATG
TGCGACTCCACCGAGTTTGATGTGCGGCAAGTATTGTTCAGGATCTGGAC
GGATCGTCTTGACATGGCGGTAGTCACCGCCCGGGTCCTGACCGATAGGT
TAAACACCAGGTTGTTCAGTGAGGTCCGTCTGCGAAGGCGGCAGAGTGCT
TCGGATGCCCTTAGTTTGGATGGAAGGTTAGTGCGTCGTATCCGTAGATA
TTTGGAACGTGGGATCCCTCACGGGAGAAGACGTCCCAATCCGATGGATA
CGGTCGACTAAGGGGTCCAGGCACTCTACCTGAAATTAAACATATgcttt
caagtttttcaagagatttttaaatttgaccttttCTCAGTATCTTTcag
gaatttttttatgaaaaaagaagCAATGACGTACAAGTATTTGCATAGGG
ATTGAAGAAGACAACACAAGAAACGCCACAAACCAATCCTTAGTCTCCCT
GAAACCAGACCTAAAACCCCTAAAACCAGAACCCAAGAGACCTATGCCCC
TCCCTGCGGTAGCTACTCATCTTCACCCATCCAACCAACACTTCTACAAA
CAACTGACTACCCAAAATGGCAACCAACACCACCAACGCCAAGGGAAACC
TGAATCTGCTGACCTACTAAATATGACCACCAAAGGAGAAACAAAGAGAC
TGGTGGCTGAGAAGACACACCAAACAAcctcaaaacaaacaaataaactt
TTAACGCCTGCTAAACCACCACCACAGGCAGCTGGGGATGACACCACTAC
CAGTCATCCACTATCATCAAGCCACCAGTATTAGTGGAACCTGCTATTTC
CGCTACCACCATAATCACCCCAGAAAGTATCCCAAGGTCAGCAGAAGATG
ATCCATCCACCAACAACTGAGAAGCACAAGACCTGTCCTGAAGAGTGGCT
ACCCCCGACCAATCTCCGATCCCCCCAAGCAAAGATGGAAGAAGTGTCAA
GTTTaggaaatttttattatttttattattttattagtcAGCCCTGAGCA
GGGAACACCTCCAAAGAAAACGCGACCCCACATAGCCATTTAAGGTCGGA
GGAATGTACTAAAGTTCCTTCGGCTATACCTTTACTGATCGTATCTAGCG
CCCTTCTAACGCCCAACTACGCCTTCCACGCTCCNN Run BLAST on NCBI transcript from alignment at sc0000019:403894..405905- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002303 ID=TCONS_00002303|Name=TCONS_00002303|organism=Clytia hemisphaerica|type=transcript|length=2012bp|location=Sequence derived from alignment at sc0000019:403894..405905- (Clytia hemisphaerica)
TTCATTTGCTTTCGAGAGATAATGGTGTTTTTCCGTCCGCACCCAATTTT
CGGTGGTGTCCGCCGACAAAACCCAGTGGGGGTGCACCTACTGGGAAACC
ACACGTTCCAGGGTTTTAGCTCCCCAATGAATTTTTTCCGTTTAATGTCG
CTTCTTGTGATGCAGGCACCAGACGACATTACCGAGTCTGAGGAGGACCA
TACGGCGAACATCATCGGATCCTTGACTTGGGAAGCAAACTTCCTAGAGT
CAAGGATCATGATGTACGAAGAACTCCTCCTTCCCCTACTTGCCCAGATG
TGCGACTCCACCGAGTTTGATGTGCGGCAAGTATTGTTCAGGATCTGGAC
GGATCGTCTTGACATGGCGGTAGTCACCGCCCGGGTCCTGACCGATAGGT
TAAACACCAGGTTGTTCAGTGAGGTCCGTCTGCGAAGGCGGCAGAGTGCT
TCGGATGCCCTTAGTTTGGATGGAAGGTTAGTGCGTCGTATCCGTAGATA
TTTGGAACGTGGGATCCCTCACGGGAGAAGACGTCCCAATCCGATGGATA
CGGTCGACTAAGGGGTCCAGGCACTCTACCTGAAATTAAACATATGCTTT
CAAGTTTTTCAAGAGATTTTTAAATTTGACCTTTTCTCAGTATCTTTCAG
GAATTTTTTTATGAAAAAAGAAGCAATGACGTACAAGGTAAATTATGCAA
ACTCCGTAAGTATTCTAAAAGTACCGCAGGCATCGTTCCGCCTTGCCTGT
CTTGCCTGTATTTTTTTATCCCTAAATTCACAATCAATCTTCAGTTTTTT
TTTTAGAAACAGATTCCACTGTAACAAAGGTCAACTTGCTTTCTTTCTTA
AAATTTTTTTCTTGTTAAACTTTCATCTGAATGAGGTCTGAAATTCGAGT
TCTCTTCTTATCGGGTCGGAATTTAAAGGTGTAGAAAGTTCTATAAAAAA
TCATTTCATTTTTAAAGGAAAGAGAGANTCGAGTTCTCTTCTTATCGGGT
CGGAATTTAAAGGTGTAGAAAGTTCTATAAAAAATCGTTTCATTTTTAAA
GGAGAGAGAGAAAAAAAAAAAGGGAAACGAGAAATTCGAAGTTGGGACTG
CACTCCGTATTAAATTTTTATTTTATATTCTATGTTGAATTAACGATTTT
TTTTTATATATATTTATAGTATTTGCATAGGGATTGAAGAAGACAACACG
AGAAACGCCACAANTTATTTTAATTTCTAGGTTGAATTAACGATTTTTTA
TATATATTTATAGTATTTGCATAGGGATTGAAGAAGACAACACAAGAAAC
GCCACAAACCAATCCTTAGTCTCCCTGAAACCAGACCTAAAACCCCTAAA
ACCAGAACCCAAGAGACCTATGCCCCTCCCTGCGGTAGCTACTCATCTTC
ACCCATCCAACCAACACTTCTACAAACAACTGACTACCCAAAATGGCAAC
CAACACCACCAACGCCAAGGGAAACCTGAATCTGCTGACCTACTAAATAT
GACCACCAAAGGAGAAACAAAGAGACTGGTGGCTGAGAAGACACACCAAA
CAACCTCAAAACAAACAAATAAACTTTTAACGCCTGCTAAACCACCACCA
CAGGCAGCTGGGGATGACACCACTACCAGTCATCCACTATCATCAAGCCA
CCAGTATTAGTGGAACCTGCTATTTCCGCTACCACCATAATCACCCCAGA
AAGTATCCCAAGGTCAGCAGAAGATGATCCATCCACCAACAACTGAGAAG
CACAAGACCTGTCCTGAAGAGTGGCTACCCCCGACCAATCTCCGATCCCC
CCAAGCAAAGATGGAAGAAGTGTCAAGTTTAGGAAATTTTTATTATTTTT
ATTATTTTATTAGTCAGCCCTGAGCAGGGAACACCTCCAAAGAAAACGCG
ACCCCACATAGCCATTTAAGGTCGGAGGAATGTACTAAAGTTCCTTCGGC
TATACCTTTACTGATCGTATCTAGCGCCCTTCTAACGCCCAACTACGCCT
TCCACGCTCCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002303-exon-sc0000019-1575043694:405219..405905 | TCONS_00002303-exon-sc0000019-1575043694:405219..405905 | Clytia hemisphaerica | exon |
| TCONS_00002303-exon-sc0000019-1575043694:403894..404642 | TCONS_00002303-exon-sc0000019-1575043694:403894..404642 | Clytia hemisphaerica | exon |
| TCONS_00002303-exon-sc0000019-1510915933:405219..405905 | TCONS_00002303-exon-sc0000019-1510915933:405219..405905 | Clytia hemisphaerica | exon |
| TCONS_00002303-exon-sc0000019-1510915933:403894..404642 | TCONS_00002303-exon-sc0000019-1510915933:403894..404642 | Clytia hemisphaerica | exon |
| TCONS_00002303-exon-sc0000019-1491911889:405219..405905 | TCONS_00002303-exon-sc0000019-1491911889:405219..405905 | Clytia hemisphaerica | exon |
| TCONS_00002303-exon-sc0000019-1491911889:403894..404642 | TCONS_00002303-exon-sc0000019-1491911889:403894..404642 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:403894..405905 - |
Blast
The following BLAST results are available for this feature:
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