|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002281 ID=TCONS_00002281|Name=TCONS_00002281|organism=Clytia hemisphaerica|type=transcript|length=924bp
CACGGATGGTCTAAATTCGCCTTGtatcaacaacaaaagaaataaataaa
gaaaGGCTTTCATAGAACTTTGCCCTTTTTCTCACCACAGCTTTAAGAAC
TAGCTGAATTTAGCTAAGTTAAAGGTTTCTTGTTAAGCTACTTGTCCAGC
AACTACTTTGGCTCTCTAGAACTTATTGTAACATCACTTGTAAATTGCAA
ATTGACCTTCGCCCTAAATAGTAATGGACCATCACTCACATGAACTATAC
TACCAAACCAAAACAGAAATACGAAAGATGAAGTCAGACCTTGAAGAACA
AATGAGATGTAAAAACGAAAGTGTGTTGCGGCTGAGCGAACGGTTGAAGA
ATACTGAGAGACTGGTCACCAGGCTAGAGGAAGAGAACATGTACAAGGAA
ACTAGGCTAGTTGAACAGTTATCAAGTATGGAGCTGCAGCTAAAGGAAAC
AACGGATGCtttgaaaatggtccaaaaagaACAAAGAGAAATGAAAACAA
AGCTGACTCAGCAATCAGATGTGAAAAGTAGTCAGATATCAAACCTGGAA
GAACGATTGTTGAAAATAGAGCAGCATTTATCCGAGCAAAATTAATTCAA
CTTTGTGATATATGAATATCAACAATTGTTTGCAACCTGCAGTGGCTGAA
GCTCATGGCAAATTTAGTATTATAAAAAGATCTGCGTCCGAATCTCCGAA
ATAGCCTTAAACAGGTTTTGTCGGACACCCTTTTTAACGGTATAGGAAAA
CCTGTACTGATAATTCTTAATTTACGGAACAGTTAAATTTAACTTCATtt
gtatatatataaaaattgtaGATAGTCTTAAATTAATTTATGCTTGTCAG
AAATGTCCGGGTTTAGAATGATTCTTCGACTCAATATTTTCAATACCACT
TTTGATTGTAGTTTTCATTCTCAC Run BLAST on NCBI transcript from alignment at sc0000019:904269..905810+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002281 ID=TCONS_00002281|Name=TCONS_00002281|organism=Clytia hemisphaerica|type=transcript|length=1542bp|location=Sequence derived from alignment at sc0000019:904269..905810+ (Clytia hemisphaerica)
CACGGATGGTCTAAATTCGCCTTGtatcaacaacaaaagaaataaataaa
gaaaGGCTTTCATAGAACTTTGCCCTTTTTCTCACCACAGCTTTAAGAAC
TAGCTGAATTTAGCTAAGTTAAAGGTTTCTTGTTAAGCTACTTGTCCAGC
AACTACTTTGGCTCTCTAGAACTTATTGTAACATCACTTGTAAATTGCAA
ATTGACCTTCGCCCTAAATAGGTAAGATGTCAATAATCGATGACGCCGAG
AAGGGAATTGTGTAGTCAACCCTTTGTTTTATTAGACTGAAACTGGGCTT
TTTACTGGGATGTAGGCATAGGAAGTCGCTAGGTTGTTAGTTTTTCGGTA
CATATGGGGTCATTTTTCTCAATTATCGCTTTGTGTTTTGTAAGCTGCTT
TCCTTAGGCTTTGAACGTCCCCTTAACTATTTCCTAATTATCTTCTCATT
CTGCAGTATACCTCcattgacctttatatatccctggaccaagctataac
caccatctttgatcaggttttttttggaattattacccaagaagaagcca
ttgcaatgttaaaaattaacgtctaacggcgctacatcatcaaaagtatt
cgaggaaaagtatctcgatgcattttcaccgctattgagtagtgccgcca
ttagggtaccaatttcaaaatgaTTTGAATCAAAGAATTTTGGTTGGCCg
agattgagtaacttggtccagggatatataaaggtcagtgtatACCTTAG
AGTAACGACAAGTATGATAAATCTTTTCCCAAATTCGCGTTTATGCGATT
GGTAAGAGTTTCATCTGTtttctttcgttatttttctaGTAATGGACCAT
CACTCACATGAACTATACTACCAAACCAAAACAGAAATACGAAAGATGAA
GTCAGACCTTGAAGAACAAATGAGATGTAAAAACGAAAGTGTGTTGCGGC
TGAGCGAACGGTTGAAGAATACTGAGAGACTGGTCACCAGGCTAGAGGAA
GAGAACATGTACAAGGAAACTAGGCTAGTTGAACAGTTATCAAGTATGGA
GCTGCAGCTAAAGGAAACAACGGATGCtttgaaaatggtccaaaaagaAC
AAAGAGAAATGAAAACAAAGCTGACTCAGCAATCAGATGTGAAAAGTAGT
CAGATATCAAACCTGGAAGAACGATTGTTGAAAATAGAGCAGCATTTATC
CGAGCAAAATTAATTCAACTTTGTGATATATGAATATCAACAATTGTTTG
CAACCTGCAGTGGCTGAAGCTCATGGCAAATTTAGTATTATAAAAAGATC
TGCGTCCGAATCTCCGAAATAGCCTTAAACAGGTTTTGTCGGACACCCTT
TTTAACGGTATAGGAAAACCTGTACTGATAATTCTTAATTTACGGAACAG
TTAAATTTAACTTCATttgtatatatataaaaattgtaGATAGTCTTAAA
TTAATTTATGCTTGTCAGAAATGTCCGGGTTTAGAATGATTCTTCGACTC
AATATTTTCAATACCACTTTTGATTGTAGTTTTCATTCTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002281-exon-sc0000019-1491911889:904269..904489 | TCONS_00002281-exon-sc0000019-1491911889:904269..904489 | Clytia hemisphaerica | exon |
| TCONS_00002281-exon-sc0000019-1510915933:904269..904489 | TCONS_00002281-exon-sc0000019-1510915933:904269..904489 | Clytia hemisphaerica | exon |
| TCONS_00002281-exon-sc0000019-1575043694:904269..904489 | TCONS_00002281-exon-sc0000019-1575043694:904269..904489 | Clytia hemisphaerica | exon |
| TCONS_00002281-exon-sc0000019-1491911889:905108..905810 | TCONS_00002281-exon-sc0000019-1491911889:905108..905810 | Clytia hemisphaerica | exon |
| TCONS_00002281-exon-sc0000019-1510915933:905108..905810 | TCONS_00002281-exon-sc0000019-1510915933:905108..905810 | Clytia hemisphaerica | exon |
| TCONS_00002281-exon-sc0000019-1575043694:905108..905810 | TCONS_00002281-exon-sc0000019-1575043694:905108..905810 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:904269..905810 + |
Blast
The following BLAST results are available for this feature:
|
