TCONS_00002258 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002258
Unique NameTCONS_00002258
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1620

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002258 ID=TCONS_00002258|Name=TCONS_00002258|organism=Clytia hemisphaerica|type=transcript|length=1620bp
ATGTTTACAATCTAATAAAAAAGAGATCGGTGAAAAACAAATTCAATCGC
GGTGCATTTGACTGACTATAACTCACTCGCGTGTAGCAAATTCTTTCCTT
TCATGTATCCTTCCTTCAGACAAgtgacaaaaatacaaaaagcaCTGCTA
GCAACACAGCCACAACAGCAGCAAGTTAAAGATAGAAGGTAAAGAGTAAT
TTCAATACCACATCATGGCATTTCGATTGATATCACATCACAGGACTATG
TTCAGCCCAATGATTACTGCTGCTCGTAGAATGCTGACAATTGACATCAC
TTCACCGCaagaatttgatgaaaaagtcTTGAAATCTGAAGTCCCTGTTA
TCATAGATTTTCACGCCACATGGTGTGGTCCTTGCAAGCAGATGGATCCC
ACTCTGAAAAGTGTCATTCAGAATTACGAAGGGAAAATCAACTTGGTCAA
AGTTGATGTTGATGAATTACAAGATTTAGCAATGGAATATGATGTGATGT
CTATTCCTTACCTGGTTGGCCTGAATAAAGGAAAAATCGTACAAACGGCT
GTCGGTGCAAAACCACAAGATCAGATCATCCAATTTGTTGATGATGTATT
GGCTGCTAGTCAATCTTAATGAGAACTAAAGTGATACctaaaagtttgaa
ttttctaACTGGTCCTTTAGCTCTTTATTTAGTATGGTGTGGAGTGGAGT
GGAGTGGAGTAATAATTACGCACGACTTGAAGATTAAAAGAATTTTCACT
TGATGAATAAAATGTGAATGGAGGTGACACGCGATCGTCGTGAAAACTAA
ATTAGGACGATAATGGAATGAAGAAAATTGTTCGTAATTTCATCTTTGAC
AGACTGTTTTTTAATatctacatttttatgacaatAGTTCAGTCATTTAA
GAGCTACTGATAGTATTTTGTATAGTAAGGAAAGCTTTGAACTTATCCCT
TACGGGAAAATCCTAGGAATAAAAATGGCTCAGAgttatataaaaaagac
ttgACATGACTAattaacttttcataaaaagcGTTTCCTCCGATTTTTGA
CTACCTGGACCTGACccaattattttcaaacttatttTACTGATTGATTT
ACAGTACTTCCTTATGTTTTGTTGTGTGTTGTAAACATTAACTCGGGCTC
CAGAAAGACACTGGAAAACTTGGAAATGAATGCTTTCAGGGAAATCTCAT
AGAAAACTAGGGAGACTCTGAGaatttcagttaaaaaaaacagaatagcT
TCTATTTTAAGTTCCGGGGACATCATTTCTTGAATTTTCTCTTTTCATAG
CAAACCATTGTGGCTCCTTGAAGTCCcaaatcattttgatttttctatga
TGTCTAATCATACTGTTTCAAGAATTTTTCCCATGGTTCATCATCGATCA
AGGGTTTCAGTTAGGGAAAAATTGCATGATTTCAGTCATTTTTTCTGGGA
AATTaagctttttttttcaaagataagGAAAAGtctttactcttaggtgc
caaataaacgggggggttggaaaattttcgaaattttaataaacgggggg
gggacctaattgccggggggttggaaattgtacttctgaaaaccccaaaa
taaggtaaatataggctaaa
Run BLAST on NCBI

transcript from alignment at sc0000019:580952..593240+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002258 ID=TCONS_00002258|Name=TCONS_00002258|organism=Clytia hemisphaerica|type=transcript|length=12289bp|location=Sequence derived from alignment at sc0000019:580952..593240+ (Clytia hemisphaerica)
ATGTTTACAATCTAATAAAAAAGAGATCGGTGAAAAACAAATTCAATCGC GGTGCATTTGACTGACTATAACTCACTCGCGTGTAGCAAATTCTTTCCTT TCATGTATCCTTCCTTCAGACAAgtgacaaaaatacaaaaagcaCTGCTA GCAACACAGCCACAACAGCAGCAAGTTAAAGATAGAAGGTAAAGGTAGGT TTAAGAAACACCTTTTACAAACCAAATACCAATGGTAATGGTTAATGCAG GAGTTTTTGTTAGCACTTTAAGGTGTATGCCCGTTATAgccaaaatattg cattttgaaTATCCAGgtggtgtcaatcgaactgttcgattatcaAACTG TTCGATTAGCGAACTAGTAATCCAACCCTATCAAACGGTAGCTGTTCAAT TACTGAACCCAATCACACACCTATCTAACCGGGATaactttcgtaaagtt cgatgactgttcgattatacGATTTATAGTTCGATCGCAGTTCGATGAAT ACaactgaagtttgattggttcaattgaATCGATTTATACCTTACggcca attttttatttatattccgaGGGCAAATTGGCGACCGTCCACGGGCCATa gatcttttttcaaagaggccacgcACCCTTTTTGAATAATtgtgtagtcc agcagaaaaacaatgataaaaccatgcatagttattattaacaggaaata aaaagaaactttttaaatatatcaAATCTAAACAAAATGATATTGCTGGA GTTGCGCCACTCATTGACAAAGAAATGGACAAACCCACTcagacagtata gacctaacttttcatacaaaaattacgggaaacgcatgtttggactttgt accctatgctgcactcaagcacttgggccaaaatcccgcaaaggcaggac aaaaatcagttttttgaagtttgcaaaaaAacgccacatagaagatcttt caaattcagtatgtaaatagagcagtaaaaaatacaacttttgtattttt ccttttttttgcaaaagttctagtaatgaaaataaagggataatgataat tgaatactatccattgatgatccgcgacACTATCGtcaagctagaatcgc ttcgcgtactcttcgcttgagaaaatgattgacagattgaagttttcatc cccgcggtgcgcgccgcgcgggagctcgggcgctcGGNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Ntcaatgatgacagtgcggttattaattttgttagatctgacaaattgat gtttgtaagtgcactttatagttttgattcccattgaagaatcaaattct ggttttcatgttattagatggtgttttagagctttaggtctacactctGT CAGATGATGGTGAAATCGCCCAACTTCTCAATCAACATTATTGCAGTGTT TTCTCCAAGGACAATGTTATAACTCCAACAATCAACGATCCCAAAGGTTC AGACATTGCCAATATTAAAggggaactaaacattttttgagttCATGCTT TTTTTGTCTCCAAGAACTACACAACACAGTATAActtcgaaaaaatataa tttccactCTCAATGTCTTTCCTATTTTGTATAAAgagtcaggaacagtc gccttattaggagacgcctcctgattaggagacccgtctcctaatcagga ggtcaggaggttcacgtctcctaatcaggagacgggtgtaattatctcgt gaacgagcaaactgtgcatgatttgattgctcccaatggaaagagcacaa aaaattgattccatatggtgattttcagaaaaatccaccggtggaatcaa tcactattctaataatccataagaaccaatcagaagtaagaatctgtctt ctgaacaaaagcgtctcaaaaagaaaaatggcggacatgaaaaaaatcaa gaggggcttccttgtagtgctttaaattaggattgtgatcgattgcaccg agaaattttgataatttttttaaaactttactaATTCGAAgctgctcttt ccattaaaactagtttcaaaatgcgcggaaaagcctaaagcccttaaaat tgagatcaaagttttatgtctcctaattaggagacgggtctcttAATCAA GTgaccccaagcgacctacatgtctcctaatcaggagacgtctcctaatc aggagacgtctcctaatcaggagacgtctcctaatcaggagacgtctcct aatcaggaggcgtctcctaatcaggaggcgtctcctaataaggcgactgt tcctgactgataaaaccttctttaaaaaacggATAATTTGTTTAAATGAA CCCCCACTTTACAcatgtttgtgacgtcatatcgTTCATATTTTCTATGA ATTTTGTGTATGTTCATCAACTTTAAAGCTTCATATTTCGTGAACAAGAA ATAATAGGAAGatagtaaaatcatttttgatttcaggcATCAGGAAGGAT TCAGTTTTACGTAGACTAAATTTGGGGTTTTCAGCttattccaataaaaa gttcaattttttcaatcgactctaaaatcattttcactCACTTGTTTTCG AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNGTCCCCACAATCAAAAGTTGAATCAGGAGTACCA CAGGGATCTGTATTGGGCCCATTACTCTTTCTCATATATATTAACGATAT GCCACTCACAATCGAATCCACACTTGCTGACGACTCACTCCTACATCGTA TCATTCGTAGCCTATACGACACCACTATTTTCCAAAACGACCTTGACAAG TTACAAAAATGGGAAGAGGATTGGTCCATGGAATTCCATCCCAAGAAGTA TAAAGTTTTGCGAATAACAAATAAAGTAAAACCTACTGTCTGTGATTACT TCATTCACAATGAGAAACTAGAAACAGTCAGCAAAGCCAAATACTTAAGG GTAACCATAAAAAAAAGCTAAATTGGAAAGACCACGTTAACACGATTGTC TCTAAAGCTACCAATGTGAGACTTTTCCTGCAACGCAACCTTCAATCATG TCTTAAAGAGACCAAATTCAAATGCTACAAAATATTCATCCGCCCAATTC TCGAATATGCTAGCCCTGTCTGGTGCCCTCATAACAACACAACATTATCT AGCAAGATCGAAATGGTCCAGCGCAAAGCTGGGCATACCATTACAGCCCA ACAGCAATGGCTAAACGATTGAATCTCGATTCTCTTGAAATGCAAAGAGA cttatcttgtttgaaaatgttatttcatTGCGTAAATGGCTTTAAATACA CGGAGAAGTCTTTACTACCAACAAGATAAAGGACTTCTAATGTAAGATAT AACTTGATCCATGCAAAActtaaagtttatgaaaagtcattttttcCTTT CACTATCAAACTATGGAATAGCTTGGACAATGGAATTGtaaatttaaaag aaagggATGAATTTAGAAACTCTTTGACTATTAAATAAGTATTATAATCA TATACACTTTTCAATTACTTTTAAGACAAAACACTTAAGCTTCTGTCCAA TTTCCTAATTTCCAGTCATTTCTATAATCTACCTCGCgacaaacttttgc aaatttttgccttcgTTAAATTCCTAACTACTGTTAGTTTTTCTTGAAAG ACTATTTTTAACTTACTATTTAAACTTACTCatcaattatttattattta ctattttaatattttaaccattatatgtacattttaaataaacttaattt aatacacttaaatttttttattttccttaaaaaatttttgttaaatattt gcgaaagtaattctaatgaatttatgcaaataaatatatagaaatagaaa tagaaattacaatatgcatgatacagtaattatgcatggttctatcattg tttttatgactgaactattcaacaggacgtcctctttgaaaaaaggtcta ttctcgcGGGCCATTCTATTAATATCTACCCCAtcggatgggacaagctg gagcttttacaatttttattactttctttaaagaaagtgtcatctctatt actattatttcaaatgagcaataatgagtgaagcatacagtgcctgtgtt ttgattaaacaacctcgtaattttctgaaaggtaaagaaaagtagtTAGA ATCAATCCGACACAATCATCGAACCACATTTAACTTTCATCGAACCACAT CGAACTTTCATCGAACTTTCATCGAACCACATCGAACTTTCATCGAACTC GTCGAACAtcatttttatacttttctttaacttttcacATTATCAGCAGG CGTCAAAATAATCCTTAAGCTTGGGTAGTCTGCTTCTGCGCCccattttg gaatattttggtGCGCGCAGCACTTTCGATTTGACTTGGAAGAGGTTGGA CGCATTTTGACCAAAACAGTGAGTTCTTCACAATCCGTTTTTCTTATATC TTTTGAAGTACTTTATCATTTCTCAAAGGtaaccccaaattttttttctt atgcttAGGGCTATCAGATGAGCCTACTTTTGTTTCTTCTgattaagttt gaaaatttggtTGACTCCCCTACTTAAAAGCTAAAATCTGTTTTTTGGAG ATTACAAAAAAAcaccacatagaagatctttcaaattcagtatgtgaata gagcaataaaaaatacaacttttctatttttccttttttttgcaaaattt ctaggaatgaaaatagaGGGATAATACTATTGTCTATTGATGATCCGCCG ACTATCGTAATAGTGCTCTTCCCTTGAGACAATGATTGACAAATTTTTCA CCCGCGTGGGAGCTTGCAGTGATTCTGCAAGCGTTCTGTAAGCATTCTCG GCTCAATTCCTGTGCCaggctaaaatggtagacttagctgtgacagatca tttcaCGACCCTTGAACACGCCCGGATGCCGCCCGAAATATTCCGTGCTA AGAtctatttatcaaaaaaaggatAACCATCTGGGCAgcattttcgaaaa ctttatTTTCGATGTCTCAGTCCTCTAATTCACTTTAAAATTCATGTGAG ACATTTCTTATGGACCTCCTTATTTTACCTTGATTCTTAACCAGTCTCTA TTTATAAATCCTTGCAATCATTTGCATGGGGTTTTGGCGCCTGGGATTGT TAACGAAAGTGATGTAAGCTTGCATTTTGCAGCGCATGCAGTCCACCGCA aatacaggagaaaaaaattcgATTTCGATCTTGAAGCATGAGATTCAAGT GTATTTGTACAGGGTGTAAAAGTATTTAAAGATCACCATATCAATTATTT AcctaaaatacatttatttaaTTACAGTGAAATTACTAAAAACACGTTGA ATTTTATCTAAAATGCAGTTTTATTANATTTAAAGATTACCATATCAATT ATTTAcctaaaatacatttatttaaTTACAGTGAAATTACTAAAAACACG TTGAATTTTATCTAAAATGCAGTTTTATTATTAAAATATGTGAAAgtatc aaaatatttcaagtcttcaaattgcatattttaggcGCTCGGAGGCCGCC CGGACTGGCCCAGCAAGTCGTTTTTGAAAATCTATTAATTTTATCTGCCC AGACGCACCTGGAGAAATGCTctattctaccatttttagaaTCTCATATT TGCCGTGCAACTAATTTTTGCAAGAAATGAATGAAACAGCGTgctttgat aataaaaaatcatgctTGATCATAAATTTTAAGATGGCGGGAAAACGTTT CTCTAAGGCTGCTGGACGTTTAACCTCAAATTTAATAATGATATTATATA gacataattatgcatgacatcACTTTATGATTAGGAGATATACATTTTAC CACCCACAAATTTTGTAtaggtttgttttgttttaactttgtattttaat gaccttccaggtcattcatttgagggctacacgtttccctccactgatgc aagtttttGTCTGGATACCTACAacataaaatttgataaattataataag aattgaaaaattcaaaaattatgtggtaaaatcttaaaattaaaaaaagc tttgaaatgAGAGGTTATAATGTGACCAAGAAAATACTGAGATTATAGAT TTAGAAATTAAAATCAGAAGCAGGAGTGTgataaaacctacaaaaaagcA GATTAAAACTTTAGGACTACCTGCTCTGAACACAACAAAGTCGTtaaatt tggttgaaattttgcagtGTTTTATCACGTTCTATGACTTTGGTTGACAG CTTTTAGACAAGTTTTCACTATGAATTATTCTTAATAATTTTCAGAGTAA TTTCAATACCACATCATGGCATTTCGATTGATATCACATCACAGGACTAT GTTCAGCCCAATGATTACTGCTGCTCGTAGAATGCTGACAATTGACATCA CTTCACCGCaagaatttgatgaaaaagtcTTGAAATCTGAAGTCCCTGTT ATCATAGATTTTCACGCCACGTAAGAATTTATCTTGTTTGTATGCCTCCA TACCTGCACTTTCCTTGTATTTTTACTGTGTATTGATTAAATATACTTAT CAAGCCTCATCCTATATATGAACACAATAAAATTTAATCTCACCTTTGTC AGTCCAACTGATCCAGCCAGCCCACCTCCTATGAAAAGCCCCTAAATACC ATCTAACGAACTCCTACACCAAAACTCTATTCCCATATGACAGAAATCTC TATGGTGGAGTACAAATTCATAGTGCGGAAAGAGATGTGACCTTCTCAAA TGACCctcccttcttggcatccccaaccttaaaaaatgcctatcccccaa ggattttggacaaaaattgctaacaaatatatgtgaaatatctttagaga gagaaagcgaaataataaacttctttcatCTTTTTGACTCATACTAATCT AAtagaaaacttcctttcatgaagaccaaatttcataacagtgcttgaaa ataatctgcAATCAATATATATAAAGCCTCCCTTCTTAAACTATCCCTCT TCCTTGCTACCCcccttttttcatgaaaatttctgatcccccttcttcat tttttcggaggtttcacccccccccccccccccNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNccccccccccccccccttaagaaaggggggtccgaactatgaa ttaaattatttttaggcATTGGAATAAATTGCACTATGTATATACCAATG TAACAATGCAAGCGTATCTAAGGTTTTTCAAAAGATTGCTCCTGCGTTTG TGTTTTCGATACTGTCTTCGAAAAGAATTTGCATGTATTTTTGTGATCAT CCTCTTCAAAATCTGACTGTGCCACGAAGGGCTGATGAATGTATTGATTG AATTTTAATTTGAGATTTCCTCTTTAATTTCAAAGGTATCTGAAACAACA ATAATCACAAgtgaaacgaaaaaaaataaacctTTTACTCTAGCTTTCCT TCCACCCAGTAGTATCAATGTTTGTATTTAGAGAAAAGTAGAGCTCAATT TCTATGTATAGATATGCAAAGATATAAATAAGCCTTTTCAAAGTTTGGTC ATTTCAATGTCTATCTGacgttttttggccatttttatgGAAGTCAGCTT AAACTTTAAAGCTGTTTCAATGTTTAGTGTCAGCAATTGggaggtttttt tattttattttttaacttttattttatcctACTTTACTGGAATTGAATAA AATTGACTTCTGAGTGAGGATTTCAGGGAATTTAATAAATATCCTTAAGT CTCACATCAGAGTGATACCATCGTGAATTTCCAATGTGTAATGCTTTTTA TCTGAAGGCTTAAGAATTTTATGGGTCTGAACattattttaagaacattt aaattATAGAGAGAAATCTTTACATATCTACTACCTTTTTAGATGTGACA AAATAACTATTGGGCAAGTACGCTTTGATTAAGTTTATTTTTGCTTATAA TTTTAGACGGCGTGGTCCTTGTAAGCAGAAGAACATTTGAACTAGTGAGA AATCTTCAGATATCCACTATCTTTTAGATGTTATAAATTAATTATCAAGC AATTACGCTTTGATTAAGTTTATTTTCGTTTATAATTTTAGATGGTGTGG TCCTTGCAAGCAGATGGATCCCACTCTGAAAAGTGTCATTCAGAATTACG AAGGGAAAATCAACTTGGTCAAAGTTGATGTTGATGAATTACAAGATTTA GCAATGGAATATGATGTAAGCATCTTCATCTTGAATTAGCTCTGGTTTAG ATGGCCAACTTTTCGCCCGGTCTATTAAAATGGGCATaaagttggctgtc taaagtcgacgcattgccctcttttgatgtcaatgcaatgacttatTTCA ATCTATTTCGAGCAAAAATTAtaactgccaactttgtgcccacttttgac ctactctaacaattagaataggtagGGCATGAATTCGGCTGTCTTAAACT AGAGCNCACtgtaacaattagaataggtagGGCAGGAAGTCGGCTGTCTT AAACTAGAGCTAACCGTTCCGTCCCCAATGAATGATAGCCAGTGTTTTGA AGCTGTTCAATTCACTGACGCTGCAATTATTTTCAACATAATAATTTTGT TACATGATAAGATTTCCTTGGATCGGGTTAGGTTGACAGCATCCTTTACC ATTTACTCGGCTTTTGTAGCGCGTCCCTGTAGTATTTCTTTTATTATAAG GAATGCGAAGCAGATTTGAAAAATCTCTCCGCTTAACAAATTTCTGTAAT GTGACCCTTTTTATTTAACCTTTGTCACCCAATTTagataaaaaaggaaa tttatGAACTTCTTTACCATAATACCCTTCCTCACTGGATTGATTCCAAC GATTCCAAGAAAGttatcaatcaaaaaatttgtgGGCGGTAATTCGCATC CCTTATAACAAAATACATCAGAAGGAAGAAGGATGCTGCTAGCCTAGAGG TTTTGTAGGTCTATGATTCAGACTATCCAAAAGACTTGTCTTACTTTATA ATAAGTAACTGATATGattgagtttttttaactttttgattcAGATACAA CGGGATAGTTTCAATATGCATTGTGTCTAGAAATTCTGCTGTAGAAGAAC TAGCTTAACCGTTAATCGGGGTGACTCTCAACATTGGGGAtaaaaggccg gtctccacttgagTGCGCAGCAATCGCACCTTTAACCTTTCATAAAAATG TAGTGCgggcttgaaaaaaaagttgaatacatttcaacttttttcaaccg ttacgtcagattgcgccaatggaattgttcgaaaaagtgcgatcgcagcg cgcgcaagtggagaccagcTTAAGTTCGATTTCCTTGTGCTCAAAGTCAG AGACTTACAGTACAGCATAAAGCATACTTTACCTAGATCAGTGTGTTTCG ACCGCATTCAAAAACCATTCGTACTTTATCCTACTTAGTCTGCCTTTTTT GTGTTCCTCTACCTCCTAGGGCCTCATACTTTAATCGCATCTGATACGTG GGAATTAATCCCTCgcttaaaggttttcttttacATGAAAGTGtatgttc ccgtttcatatcagggtaggtctgcctattgttatgttGTGCTGGTATAA GCAAAAAAGGATTTTATTTTCCTCTCtatctgaccaatcttgctccacat ccatgtcaattcaatatcaaaaagcttgtaaatcaaaattaatgagtaag caaacgataccaCACACTTGccccttataaaaaaaaacaaaaaagcttta agtaCGAAAGAAACTGTAAACGAGGtaaatatttattatttaaaatttac attattttttaGGTGATGTCTATTCCTTACCTGGTTGGCCTGAATAAAGG AAAAATCGTACAAACGGCTGTCGGTGCAAAACCACAAGATCAGATCATCC AATTTGTTGATGATGTATTGGCTGCTAGTCAATCTTAATGAGAACTAAAG TGATACctaaaagtttgaattttctaACTGGTCCTTTAGCTCTTTATTTA GTATGGTGTGGAGTGGAGTGGAGTGGAGTAATAATTACGCACGACTTGAA GATTAAAAGAATTTTCACTTGATGAATAAAATGTGAATGGAGGTGACACG CGATCGTCGTGAAAACTAAATTAGGACGATAATGGAATGAAGAAAATTGT TCGTAATTTCATCTTTGACAGACTGTTTTTTAATatctacatttttatga caatAGTTCAGTCATTTAAGAGCTACTGATAGTATTTTGTATAGTAAGGA AAGCTTTGAACTTATCCCTTACGGGAAAATCCTAGGAATAAAAATGGCTC AGAgttatataaaaaagacttgACATGACTAattaacttttcataaaaag cGTTTCCTCCGATTTTTGACTACCTGGACCTGACccaattattttcaaac ttatttTACTGATTGATTTACAGTACTTCCTTATGTTTTGTTGTGTGTTG TAAACATTAACTCGGGCTCCAGAAAGACACTGGAAAACTTGGAAATGAAT GCTTTCAGGGAAATCTCATAGAAAACTAGGGAGACTCTGAGaatttcagt taaaaaaaacagaatagcTTCTATTTTAAGTTCCGGGGACATCATTTCTT GAATTTTCTCTTTTCATAGCAAACCATTGTGGCTCCTTGAAGTCCcaaat cattttgatttttctatgaTGTCTAATCATACTGTTTCAAGAATTTTTCC CATGGTTCATCATCGATCAAGGGTTTCAGTTAGGGAAAAATTGCATGATT TCAGTCATTTTTTCTGGGAAATTaagctttttttttcaaagataagGAAA AGtctttactcttaggtgccaaataaacgggggggttggaaaattttcga aattttaataaacgggggggggacctaattgccggggggttggaaattgt acttctgaaaaccccaaaataaggtaaatataggctaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001194XLOC_001194Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002258-exon-sc0000019-1491911889:580952..581145TCONS_00002258-exon-sc0000019-1491911889:580952..581145Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1510915933:580952..581145TCONS_00002258-exon-sc0000019-1510915933:580952..581145Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1575043694:580952..581145TCONS_00002258-exon-sc0000019-1575043694:580952..581145Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1491911889:588547..588721TCONS_00002258-exon-sc0000019-1491911889:588547..588721Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1510915933:588547..588721TCONS_00002258-exon-sc0000019-1510915933:588547..588721Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1575043694:588547..588721TCONS_00002258-exon-sc0000019-1575043694:588547..588721Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1491911889:590393..590516TCONS_00002258-exon-sc0000019-1491911889:590393..590516Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1510915933:590393..590516TCONS_00002258-exon-sc0000019-1510915933:590393..590516Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1575043694:590393..590516TCONS_00002258-exon-sc0000019-1575043694:590393..590516Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1491911889:592114..593240TCONS_00002258-exon-sc0000019-1491911889:592114..593240Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1510915933:592114..593240TCONS_00002258-exon-sc0000019-1510915933:592114..593240Clytia hemisphaericaexon
TCONS_00002258-exon-sc0000019-1575043694:592114..593240TCONS_00002258-exon-sc0000019-1575043694:592114..593240Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:580952..593240 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.08042 8.13223 12.857 12.864 37.497 28.7335 31.8229 36.4969 33.6149 31.2398 29.5186 32.4765 17.3863 16.0002 19.5288 23.7381 27.8417 32.616 17.2373 12.7354 23.5535 25.0822 17.173 17.9799 21.0967 20.5076 22.6052 21.1416 27.1641 22.8445
Blast
BLAST of TCONS_00002258 vs. Swiss-Prot (Human)
Match: THIOM (Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.527e-24
Identity = 44/121 (36.36%), Postives = 77/121 (63.64%), Query Frame = 2
Query:  242 RTMFSPMITAARRMLTIDITSPQEFDEKVLKSEVPVIIDFHATWCGPCKQMDPTLKSVIQNYEGKINLVKVDVDELQDLAMEYDVMSIPYLVGLNKGKIVQTAVGAKPQDQIIQFVDDVLA 604
            RT+++  I+    + T +I    +F ++V+ SE PV++DFHA WCGPCK + P L+ ++    GK+ + KVD+D+  DLA+EY+V ++P ++ +  G +V   VG K +DQ+  F+  ++ 
Sbjct:   50 RTIYTTRIS----LTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG 166          
The following BLAST results are available for this feature:
BLAST of TCONS_00002258 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THIOM2.527e-2436.36Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2... [more]
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