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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002255 ID=TCONS_00002255|Name=TCONS_00002255|organism=Clytia hemisphaerica|type=transcript|length=2604bp
TGATAAATGCATGTTTTTATATTACAACACGGCATaaacataaggctttg
aggcCAAAAACTCGAGAACATTTCTGTAAACATTTCTTCTGTAAGGATTT
GTAGACTCTTAAAACGTGgcatttcaaaagaaaaaattttaaaccagGGT
TTTTACACAGACTTTTACATAACTAACGTAAAATCTCTTGTGCGAGTGAT
TGCCTGCATAAATTGTGATCATATATATACAATTTCtatgaatataaaaa
aataagattaaCTAAACACATAATTTGCTTAAAAGATCTTTACCGCAatc
aaaaacatcttcaaattcATTTGCCACTTTTTGTGGAGACCAAGATGAAG
AATTCAAATCTTTTGTCAATTTCACATTTTCGATGTAGATATCTGAATTA
TCTTTGGTCAAGTCACTGCTGTTGATATTGCGCAAAACAGATTCCTCCGA
TATCTTTTAACTAATATCGGTGCCAGAAATCATTATTGTTTCGTAATTGA
CTTTCGacaataagtaatagttatcacacggtacagagtacaatatgggg
atatatttttcgagttcagatttttcgtcatattataaaaaatagaaaac
tctgaacgagaaaaatatatcccatattgttTGAACGAGTAAGTGTGATA
ACTGGGTTATCCTGgtttatcgtcaacttgaaaaatatcaacaaactttt
ctcTCTCTCGGTGttgtcttttttaatgttttgtttttttctcttctaac
tttttgtttttttctctctccTTGAAATCaacacaaaaacattcgaaaaa
aatcgaatggccattaaaaagatcaaaacattctATTCATAATTCTTTTG
AAACCTGATGTGCATTatgaatgaaaagaaaacattcctGAGCATAAAAG
TGTACAGCAAAATgatctctcgcttaccagaccccttttCTTGCATTTTG
TACAGTACAAAATGAAATACAGTatttatgtacgcgtttttagccaatca
gactgctcatatttttcatgttgacaaTAAACTAAAATATATCCTTCGGG
TACTTGAGGAATTTCTTCCTagtcaataaaaagaaaaaagggttTTCACT
TTTCACGTTAAATCCTATGTGTGAATGCTTGCATCAAAATGTGAATTATA
TAAACCaaatgtaaattaaaaatacatGCATTAAACTCATAATTGTCTCA
GAAGATCTTTACcgaaatcaaaaacattttcaaattcatttgCCACTTTT
TGTGGAGACCAAGATGAAGAATTTAAATCTTTTGTCAATTTCACATTTTC
GATGTAGATATCTGAAATATCTTTGGTCAAGTCACTGCTGTTGATATTGC
GCAAAACAGATTCCTCCGATATCTTCAATCTAATATCGGTGCCAGAGATC
ATGTACTTTTTTGTAATCGACTTTCGACAATAAGATAAAATATATCCTTC
GGGTAATTGAGGAATTTCTTCCAAGTCTAAAGTACCAGGTTTGATTCGTA
GATTGTGGAAAAAATTATTCTTCAATGCATTAGAATGCTCTTTGATGCTT
TGCTCGAACAATGGGTCTGACTCATACATTTTAACTTTCAACCTCAAATC
GAGACTTGTTTTCGGGTCGACAATATCGAGGCGTGCAACCGATTTTTCTG
GCCAGCAAAAATAGCCAGGACCCACATCAATATCATCAACAAATTGCGAG
CTGCCTTCTTTTGGGATGAATTGACCATTTAAATTGACGAAAATCTTGTA
TCGGAAAGTTGAAAGTGGGTTATAGGTGTGGAAAGTGAAATCATATCGAC
AAAACTCATCTTCTTTAATCCAACGGTGGTAATTATCAAATTGATCTAGA
GCTGGGACTTTTTCGCGTTCAAGTCTTCGATAGGCTAAAACCTCAGATCC
ATCTTTGATAATATCGATAACTTGGCAAGATCCTTCTGGAAGTTTAAACA
AAGCTTTTCCTAAATGGAACTTCAAAGAAAGTTCACCGTATGCTGAACTC
ATATTCTGCAGTAATACAAGAGCtttttcaaaatcagttttCAAGTCAGG
AATCTCATAAAATGATGTTATCGCTTCAAAACCATCGCAACCGGTAATGG
TACACATATTTCGAATGCCTGGAAAAGAACTTTTTTCAAGCCACAAATAC
TGATCAGCCTTTAGACCGATTACGTAACATTTTCGATAATCTTTGCTTTC
TGCGTCAGCCATGAGACGTGTTAGATTATCTGCGAGAAATGCTGAAAAGT
CATCTGCATGTTTCTTTGTACCTTTGACAAAGATTGATCTGGTCTTCGAA
TCTAGTCTGATAAGTACTTGatatttgatttcaaaatattcaagtTTATC
GTTGATTGCATGCCAGGCGTTTTTATGGGCTGGTATGCGATCTGAATACG
TCATGAGGCATGTTTCAACCATGTTCGAGACATCAGGACGCTTTCTCTTG
ATCAAGTCGTTCGCTATCTTTTGAGCTTTTTCAAATTGGGTTACAATAAC
TTTAATTGATTCTTCTTTCTTGGTATAATCAATATAGATTGGTTTGAACT
CTTGTTTGTTTTGGTAGATATAACGACTAAGGCAGCTTGGTACATCTAAA
GCCT Run BLAST on NCBI transcript from alignment at sc0000019:555565..558168+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002255 ID=TCONS_00002255|Name=TCONS_00002255|organism=Clytia hemisphaerica|type=transcript|length=2604bp|location=Sequence derived from alignment at sc0000019:555565..558168+ (Clytia hemisphaerica)
TGATAAATGCATGTTTTTATATTACAACACGGCATaaacataaggctttg
aggcCAAAAACTCGAGAACATTTCTGTAAACATTTCTTCTGTAAGGATTT
GTAGACTCTTAAAACGTGgcatttcaaaagaaaaaattttaaaccagGGT
TTTTACACAGACTTTTACATAACTAACGTAAAATCTCTTGTGCGAGTGAT
TGCCTGCATAAATTGTGATCATATATATACAATTTCtatgaatataaaaa
aataagattaaCTAAACACATAATTTGCTTAAAAGATCTTTACCGCAatc
aaaaacatcttcaaattcATTTGCCACTTTTTGTGGAGACCAAGATGAAG
AATTCAAATCTTTTGTCAATTTCACATTTTCGATGTAGATATCTGAATTA
TCTTTGGTCAAGTCACTGCTGTTGATATTGCGCAAAACAGATTCCTCCGA
TATCTTTTAACTAATATCGGTGCCAGAAATCATTATTGTTTCGTAATTGA
CTTTCGacaataagtaatagttatcacacggtacagagtacaatatgggg
atatatttttcgagttcagatttttcgtcatattataaaaaatagaaaac
tctgaacgagaaaaatatatcccatattgttTGAACGAGTAAGTGTGATA
ACTGGGTTATCCTGgtttatcgtcaacttgaaaaatatcaacaaactttt
ctcTCTCTCGGTGttgtcttttttaatgttttgtttttttctcttctaac
tttttgtttttttctctctccTTGAAATCaacacaaaaacattcgaaaaa
aatcgaatggccattaaaaagatcaaaacattctATTCATAATTCTTTTG
AAACCTGATGTGCATTatgaatgaaaagaaaacattcctGAGCATAAAAG
TGTACAGCAAAATgatctctcgcttaccagaccccttttCTTGCATTTTG
TACAGTACAAAATGAAATACAGTatttatgtacgcgtttttagccaatca
gactgctcatatttttcatgttgacaaTAAACTAAAATATATCCTTCGGG
TACTTGAGGAATTTCTTCCTagtcaataaaaagaaaaaagggttTTCACT
TTTCACGTTAAATCCTATGTGTGAATGCTTGCATCAAAATGTGAATTATA
TAAACCaaatgtaaattaaaaatacatGCATTAAACTCATAATTGTCTCA
GAAGATCTTTACcgaaatcaaaaacattttcaaattcatttgCCACTTTT
TGTGGAGACCAAGATGAAGAATTTAAATCTTTTGTCAATTTCACATTTTC
GATGTAGATATCTGAAATATCTTTGGTCAAGTCACTGCTGTTGATATTGC
GCAAAACAGATTCCTCCGATATCTTCAATCTAATATCGGTGCCAGAGATC
ATGTACTTTTTTGTAATCGACTTTCGACAATAAGATAAAATATATCCTTC
GGGTAATTGAGGAATTTCTTCCAAGTCTAAAGTACCAGGTTTGATTCGTA
GATTGTGGAAAAAATTATTCTTCAATGCATTAGAATGCTCTTTGATGCTT
TGCTCGAACAATGGGTCTGACTCATACATTTTAACTTTCAACCTCAAATC
GAGACTTGTTTTCGGGTCGACAATATCGAGGCGTGCAACCGATTTTTCTG
GCCAGCAAAAATAGCCAGGACCCACATCAATATCATCAACAAATTGCGAG
CTGCCTTCTTTTGGGATGAATTGACCATTTAAATTGACGAAAATCTTGTA
TCGGAAAGTTGAAAGTGGGTTATAGGTGTGGAAAGTGAAATCATATCGAC
AAAACTCATCTTCTTTAATCCAACGGTGGTAATTATCAAATTGATCTAGA
GCTGGGACTTTTTCGCGTTCAAGTCTTCGATAGGCTAAAACCTCAGATCC
ATCTTTGATAATATCGATAACTTGGCAAGATCCTTCTGGAAGTTTAAACA
AAGCTTTTCCTAAATGGAACTTCAAAGAAAGTTCACCGTATGCTGAACTC
ATATTCTGCAGTAATACAAGAGCtttttcaaaatcagttttCAAGTCAGG
AATCTCATAAAATGATGTTATCGCTTCAAAACCATCGCAACCGGTAATGG
TACACATATTTCGAATGCCTGGAAAAGAACTTTTTTCAAGCCACAAATAC
TGATCAGCCTTTAGACCGATTACGTAACATTTTCGATAATCTTTGCTTTC
TGCGTCAGCCATGAGACGTGTTAGATTATCTGCGAGAAATGCTGAAAAGT
CATCTGCATGTTTCTTTGTACCTTTGACAAAGATTGATCTGGTCTTCGAA
TCTAGTCTGATAAGTACTTGatatttgatttcaaaatattcaagtTTATC
GTTGATTGCATGCCAGGCGTTTTTATGGGCTGGTATGCGATCTGAATACG
TCATGAGGCATGTTTCAACCATGTTCGAGACATCAGGACGCTTTCTCTTG
ATCAAGTCGTTCGCTATCTTTTGAGCTTTTTCAAATTGGGTTACAATAAC
TTTAATTGATTCTTCTTTCTTGGTATAATCAATATAGATTGGTTTGAACT
CTTGTTTGTTTTGGTAGATATAACGACTAAGGCAGCTTGGTACATCTAAA
GCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002255-exon-sc0000019-1491911889:555565..558168 | TCONS_00002255-exon-sc0000019-1491911889:555565..558168 | Clytia hemisphaerica | exon |
| TCONS_00002255-exon-sc0000019-1510915933:555565..558168 | TCONS_00002255-exon-sc0000019-1510915933:555565..558168 | Clytia hemisphaerica | exon |
| TCONS_00002255-exon-sc0000019-1575043694:555565..558168 | TCONS_00002255-exon-sc0000019-1575043694:555565..558168 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:555565..558168 + |
Blast
The following BLAST results are available for this feature:
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