TCONS_00002228 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002228
Unique NameTCONS_00002228
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length692

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002228 ID=TCONS_00002228|Name=TCONS_00002228|organism=Clytia hemisphaerica|type=transcript|length=692bp
CGACGTTAGAAGGAAGAACTTCGAAATAGTGATATGTTAACAAGTTAATA
CATGAAACTCGAGAGGACTGCAACAACATCAAACTGAAACAAAgtatcat
tcagtcaaaataaGAGAATCGAAGGATTCTCGGTGGAAAGTGGGGCAGTT
TCTCAGGCTACACTGACACATTTTTAGCCTGAAAACacataaaaaagaaa
tgtcaACGAAAAAGAACTCAGACTTACATTTAGACTTGCGTGAAGTGTTA
CGTGATGCGGACCCAAACGCAGAACTATCGTGCGTTGTACGTGACCCGAA
CGGACAGAACATTGATTCAGCAATCGAAGTATCGAGTGCTCGAGGACGAA
ATGTGAAATTTTTCCCGAAACTGACCGGCAAACACAGCGTTTATTTGTAT
TATGATACAGACTTGGTTCCTGGGTCACCTTTTATCATTGAGGTATTGCA
AAAACCGAAATTGATAAAATGAGTTTGATTGTGGTATATGGACTTGTATG
GATTCGGATATTTGTGGCGGAGCGGTTGTATATTTTAATTGTTAAccctt
tatatttttttcattatttaaattcatattgtTTTCTTGGCTAAAAATGA
AACAGTGAAGTCTATTCCAATGgcaaattgcaaaaatgacagTCCGCACT
TTTCGGTACTTTgctcttgaaagaaaaaatattgaaaataat
Run BLAST on NCBI

transcript from alignment at sc0000019:12206..26165+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002228 ID=TCONS_00002228|Name=TCONS_00002228|organism=Clytia hemisphaerica|type=transcript|length=13960bp|location=Sequence derived from alignment at sc0000019:12206..26165+ (Clytia hemisphaerica)
CGACGTTAGAAGGAAGAACTTCGAAGTAAGTAATTAGCCAATATAATTAG
CGAGTTCAATTCCATACATATCGAAAGATTGATATTGATTGACTCTTTGT
TTAGTTTCTTCCGTTTAGTATTACTTACATTATTGCAAATTTCGCATTAA
CCGTATCATTACGCGGTTTTTACAAgacaaaactttataaagagaACATA
AGGcgtcgatggccaaaatattaagaacaaaatgGGAGCACcttttgcag
actctaaaacacccattttaaaaaaaaaactttttgttttttgagttcct
tgacacttttaacaaaaaccTGTCTTTAATTCATTCTATTAATTAGCATT
TTAACTATCAAAATGACGTTATAAACCTTAAAATTACGGTAATAAAATCT
TATATTTACCCCCTTTTAGTttcgaaatttctttaaattgtCTGCAAAAT
ATtgaacccagctggcacaaaacgttattctaacgttcatctaacgttat
atggacgttgtgaacgttagactaacgttgaaacaacgttgtgtgccagc
tgggaactatctaaaaaatttcggaaaaattttctaagttgatgtatcaa
aagttatgactctttttgtacgaaaagagtcataacttttttggattaaa
aaattggtcaaaaactaCTATATTTAAGTTTTTGGGACGAAGAAGTATGA
AAGTTCACTATGGCCCTTAAATCTGAGACTCGGTATACTGGCTAGTACCt
aatcggggaaaaaatgtcgggggaaagtgacgaggAGGTAATTTTCGACT
CATATGCTTCAAAAAATAATCTTTGAGGGTCCCACtggatagaaatagaa
aaatcttagaattttcatgaaattttgaccttttagAGAAGAACTTTCAA
TCAAATTGTTTCCAATATCGCTTTAACGGTTTCTGGGCGGGGGAAGTAAA
GAAGTAAAGATGAAGTAATTGTTCATCTTTTAATTTGAGCAATTTACAGT
GCTAATCTCAtccaaaaagtcataaaacttaATATGTCGGTACTTTGAAT
CCTGGAAGAAATCAGGGGTAgtcccaaacaattttttgctagATGTTGCt
tgattttgacattttttgccTAAAACCTAAAACTAACTTCTTCATCGATT
CTTTTTGTATTGGATTTACTACATTAAATCTTGATCATCAAAAACGCAAT
TCAAAGAGCTTTGTATATAAAAATTGTTTAGTCCATTTTTTGTACCCTTA
AAGAGACCACTTCCCcagaatttcagcctaaatttagtccaaatggcaaa
aatttatgaccctttaaCTTTGAGGGAGTTGATTTTTACTTTCGTAATTT
TTGAACCCTTATAGAAACTTAATtgctttttattgatttttgtaaccctt
tgaTGGAGTTTTGAGTGTGTGAAAAATAAGGATCATTTTTATGGCTCGCA
CACACCCTGTTGCACGAAACATTATAgagtttattttttaaacactcgag
tttaaccctttaagtgccaaggccatttttttctaaCGGATTGAGTTGAA
TGGCTATGACGTATGCGACGCGGAGCACTATATGGTATGCAAAATGCCAT
GGATGTATAATCAGCCATATAATTGCAAACCCCCCTTGATAAGATAAGAC
ATAATTgactaggctacgtcatatcttcctctgtttcgagcgtaaaacta
ctcttcgggatatgaacACTGTTTTCAATATTGAATTTCTCCAGatacat
cgcatgcgcactgaggttttgatgaaacaatagagagtttcgaaacctaa
gccaatcagctgtgtttttaacattctttaatttgaaatctctattgata
aacatcttgtgaaagttgtctataTGTTTAAACCTaataataagcaattc
ccggtgggggttactagtggccacctatagcagtgcctatagaccaagag
taaggcctaaacgCCTAGAGCTGGCTATTGTGTGGACTAATAATTGACGA
GATCGACCCCATCACGGTCGAACGATAATCAGTGCCTACAATTAAAATCA
ATTAACCCAGTAAGTATAAATAGGGAAGACTTTCATATCATTATCAAATC
GTCATTAAATGCTAGAAAATATCGAACCAAGCTTGGTTGCAGAGTAAATT
GCATCCAAAGGAGCACAAAGATTCACTACTCTCGAAAATTATTGCAGcat
atttcaacaaccaactaAATCAAGACTTTTTTTACTTCAATCTTATAAAA
GAGGGTTACTATAAGGATTCAGAACAAAAATGTGGAACGCAATTTGGAAT
TTGTTACCATTACTCCAAGGAAGTTCAGTCTTCAGTATGCCATATGCAGT
CATCCTTGGTGGTTACGTCACTATTGGTTTCATTGCTCTGATGAGTGTTA
TGGGAGATTTGACTTCTCTCATCCTCATCGATTGTTTATATGATGGTAAA
GATCCAAAGACACGGCAACGAGTTTACAAGGATTATACAGGACTTGCCAA
AGCTGTTCTTGGACAATATGGATCACACGTTTTTCGTGGTTTATTGATCA
TATATTTGTATCTTGGCAATGTCAGTAATATGGTGCTATTATCTAAATGT
GCGTTTGATATCCTTGCAAAGTATTGTCAAATTAGTTTTACCAATGTTAC
CATCGGGTGCGGCTTACTGGCTTTCCCAACTCTGTTTTGCCAACGATTGA
AGGTCATCGCATATATCAGTGCAATATCTGTTTTTTCAATCCTGATCGCT
ATCATCACTTTACTGGTGATTCTGTCCACGCAATTcaatcattggaaaga
tatggTGGAATCGATTCCAATCTTCAATGTAGAAAAGTTTCCTGTCTCCG
CTAGTATCGTCATGTTTTCCTGTGTTTCACATTCTGTTTTAACCAAAGTT
GAAGGAGAATTGGAGAATCCTCAAGATGCTTCCAAAGTTGTCCATGTTTC
TTTTACAGTATCAGCCATCTTGAAAACAATAGTTGGTACCTTAGGAGCAT
TGACTTTTGGACCTCAAACGCAAAGCATCATCACTTTAAATGCTGGCAAG
TTAAATCAAATCGTTGAAATCATATTCGTGGTGGCAAACATTATTTTCAG
TGTTTGTAATTTTCCTCTAATGATGGTTGTGATCACAGATACAGTGGATA
ACATAGTTAAAAATCGAAAACATTATCAAACTAGTACATTGTGCCGATAC
ACATGGTTTTTTATAACTCGATTGTTTTTAACAATAGGAACTATCATTTT
AGCTTTCGTCCTCCCTTACTTTGGTAACCTGTTGGCGCTGAGAGGGAGCT
TGATTGCAACCTGTTTAGTCTTTGTGTTCCCTTGTTTCTTTCATCTGAGA
CTCAAATGGAAAACGTTGACGGTATTAGAAAGAATCCTTGATATTGCACT
GATTGTTATTGGAACTTTTTTAGGAACAACAGGGTTGTACTCATCAATAT
ataatttatttgaaattgtaAGTAAAGGTCACGAGTaaactttagaaaat
aaaatttgggtaaaaatttttgtttaaaacaccttttcgaccgtagccgc
caattgccgtaCGGGCTTtttccccctaaactcgatccaatccttttttg
acacctttttctattgtctatacaGCACCTGAACCCGAGAATGTAGGTAA
AATTTGAATCACATCTGAAatatgtagatttgcattttaaaaaacattga
atgttttcaacgaaattttgaactcccaaaatcctttcccaggggttaat
ttcaatacttttgatagataggctaatttcTTTAGTCCTTGAAGTtaact
cccattttcgttatagcctccagaatgtaggtttggtttcaTGGCTTTGA
ATCTAATATTAGtaacattttgatattttttcaattggattaaCTATAAC
Ggctaattttagaaatattttgtgccaaaacaatattctaaagaacattc
ttaatattttcttatactgaaaattggattttttcgctttttaaccccca
gattGTAAGTGAAAAGATTCGGTCGTTGAGAGCGGATTTTtagtattcat
cggaaattacATTGTTCTCTAATTAAAATTCATACTTTATAGAAAAATAC
TCtgacaaaaatttaacaaagttttatcgtgctacaaatgaggacaagta
aaagaaaggacgaaaagaagagacaagaaggTTGTTTTTAGGGGGTTTCA
AGGGGTActgaataccgaaataccggcaATTCTTTCCCgaaataccggaa
taccggGTAAAATTAActccaaataccgtcaccgaaaatatttacatttt
atttcGGGCCTATTTCGTGAGGAAAGGTATTTCAACTGCAAGAATTGTTG
ATGCAATAAGGAGTAAGGGATGCCCTGttgaaaacttcattttcaacTGT
TATTAGCTCAGTATATCAGACGAACGATCTAATTTTCAAGTGCAAATAGC
ATAGAAGAAGTGAAACTTGACAAAGTGCAACCATGGGTTGTGCTGACCAA
AGAACATCTCGATTTTAACACTTTCTTATTTAGTAAAAGCACTATGTTTT
AGAATGGTTTTACTATTGTAAGTACctcaaaaagctctttttatggATAA
CTCTTTAGTTCTAATTTGAGAATTAGGCAGTACCTATCCCATCAACTTCC
TTTGAGAAAAGGGCAATAGCATGGTTGCTTGATCAAAATTGGggagataa
ataaaaaaaaggcaACCCGTAAGGGCTGGGGAAACATTTTAACAAATACG
AGAGAAGTAGCGAGCGCGAAAGATTTGTGTTAATTTACAGGTCCGCTATT
GTGGCTAAAAGGACTAAAAGTGTGTTTTGTGATGTGAAATTAGGAAAAGG
TTTAGTCTGTCCATTTGCCTTTGGATCAAATTCTactctaataaagaaaa
aacacatTTGTAAGTGCTTGAGAGAAAGTAgcatttttcttgtaaaaagt
CATTATTTAAAGGATAGTGAATGGACTATAACCACAAAAAAGTTGCCACT
AGACTGACTAGAGGTGGAGCAGTTTCTGACCCCATGTCACCACGCTACTG
TTTGGAAGCTAAAGTGGTATATAAATACTGTGTCAAAACTGATCATTTTA
GAAAACATGGGTGTAgttttctaaaaataattttagcgACGCAGGCGCGA
TTTTCGAAATTCTCGCTTTAAAAACAGTTcggaaagattttaaagttacc
GAAATACCGAGGTTTTAAGAGTAATTATAGCCCTGCaatacaactgtcaa
tcatttttaagaaaactgattGGATGATTAATGTCACGTGGCCGTTCAAT
ATTTCTCCATAGTGACCAGTTGTGATATTgacatcattaaaatgtcaatt
acttttattactttatttttgcaggGCTATAAATGGATTATTAACCTCAG
AAGCCTGTCTCTCTTGCAAAATATCGACCTCGTTCGCTCGTATTGGACCT
CGCTTCGCTCGTATTTTGCCAGAGAGACCGGCTTTTCGGTTAATAATCaa
taaatatcgaaataccgaagCATTTTTAGGCAATGTATCGTCACCAGCAG
TATTTCAAATACCGGAATACGgtactttttttcttgaaatagcGAAATAC
TGGACAGAAAAAAGGCCGATACTGTGTCACCGTAAACCTTGAAACCcccc
tttttattttttaggtttgaaattttgtgttaaaatatgtgaataaagTA
ACAACACCCTTGTCTCATAGCCCCGgaggaactttttcccacagtggaga
caaaaatttctactaaagtCCCAATAAGGATAGAAGTTGGGCTAAGTTCC
CAGCGGGTCTAGGACATGtcttaaaagctcaaaatgtcaacaATACATTC
ttggggtttactacattctcgagGCCAGGTGGtgtaggtgcgaaaaaaag
actgggacggttttagtgtggcaaaacggacaaaaaaatgcccacgcGGC
AATTAAGCGACTACTTTCTGTCATGAGGACCTATGGTCTTAAGTCATCTC
ATATATTGGGGTTTTAGCAATCGACTCGATATGGCCCAATTTGAGACAAC
GTGAACGTCACCATTAAGAGCTGTAATCACTCTTTAGTAACCCGATAATG
GCCCTAAGGAAGACATTAGCTGGCTTATAACTTGTGTCAATATTTTACAG
GACACTCAATATCATGAGTCCACGCAGTCCCTGCAAAAGATCAAGTTAAC
GAGCCTTTAAGATCAAGTTAATGAGCCATTAACCCTTTAACGACTGCgtc
tttttatttttacgtGCCCAAAAGACCACGCTTTTTTAAATGACTGCTCT
TAAAATACCGTGGTTTTTTAACGAGCCGTGCCAAAAAGACAGAGGACGAA
TATCATCTCGTCATAATCTTGTTCGAAGGTTTGCGACTGAATGACGAAAT
ATATCGCCAGAAAGTTTATTGGGGGTTCGCTACCATATCTAAAAATGATA
CGACTTGTGTACAAAACTTTTCTATACAGTCATCAGTTTTTTTGGCACGG
AACACGATGACGATATACCTCAGAATCAGTAGTTTGGAGGATGTTTTCCC
CACTATTTGTACCTAATAGACCTTCTGATTACCCATAATTATCAAGTGTA
ATTTTCTTTAGAATGTGGGTAAAATGTATGAAATGCTGTTGATGTGATTT
TTTAAGGAATGAATCGTCTCGTATCTTCCTGTCCTTGATATAagctcccg
ggggggggggggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCTCGCATcttatttctaccatatgtgtagatatgtaaaca
TCCTTAATCCTTACATCCGCAAACATcacgtttttcttttaagaacaaac
tatataagaacataaggcttcgatgaccaaaatgttaacaacaagttaag
aacattttaaggctttggggactctaaaacatccagtttcttagaaaaat
gggcaaaaatactaacaaaatggtgaaaataagaacatgttaagaaaatt
tgtaggcttaaaactcaaaaagtttagaacatccAAGGCTTTGGATGCTC
ACGTGTACTCGTTTTTCTCAAGAAGTTAACCTTTTTCAACACATACCCTC
CTGCAAAattggttcttataaatttgttcttatatagggGTTTGGGGCGT
ACAggacttcaaaaaactgataaaCCGCGCAAAAATTGCTCTTTCACCGA
TAAACTGATCCTCAGTCAGTGACACCGACTTTTTTACTCTTCCTTTAAAA
GATATGTGACTCTTGATGAGCAGGCTGCAGGCATCCCCGAAATTGTTATA
AACAAACCATCAATCCCCAATCCTATGGAAACATGTTAGTGCCATCAAAT
TATCAGCAGAGAATATCTAAGTTAATTTATCTCAAGATAATTTTATCTCT
GAATGTTTATATCTGtgtttttcctcaaaaaaattcatcccTGTATTtct
atctcgagataaatttaTCCCTGGATATTTATCTCAAGATAAATTTACCT
CTGGATATTTGATCGGAATCACtaattgaaactaattttctttgcttaac
AATTAGAGAGGAATAAAtattttgtctatcagtgattcaGACGtttctat
tattcctatctctaaagaaggatgtcaaaattagaagaggggtTTCGACA
TATtagggagcggtcataaagtatctactaggggggggtggaggattcta
GGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNgggggggggttccaaaatttttttgagggttt
aagggggggttccaattttttttgggaaactcaagagaaaatgtaggaag
tctaatttcatagttttacgtttgaagatatcaaaaatttttcggcctTA
CGGCCGACAACTCATAATTTATCTAATGGATATATGTACATTTCATATTG
CCATTATTTGGCCATCATTGCCTTCCCCTTATTGGTTTGTAACATTAATC
AAGGtgagggaagtagattagtggctCTCATAGCTCATccgagtggtttg
aaaaagtacttcctaaaagaaatttgtcaaaacagagtgtcttttagcta
aaatggtggtgaaaaatattgaaattcaaaacgccttaacatttcaaatt
acaaaaaacaaattccaagtttcttgactcaaagattccgggcgttactt
tcaaccatactgctcttacagtttaatattttcacttaataatggggggc
gcaaataaggacaaaaaataccaggggcgccaatttcatagtttgcaccc
agaaaattaagccaggtcgctactggggaaaataagccgtatttttttcc
aaatcttacgGAAGCTCAGAGAAAACCACTTGATGATTCTTGTGTCCTGT
TATACTTTAACTTAACAGGGCTAAACTATCTCTCTtaccttattttgaca
taaaaaactgtcatacaaacaaataatactctttgtCTCTTTGTACCGCA
TCTGTATGAATTCTTTTTCGCGTAAAAACTTTTctagtaggggggggggg
ggcgaaaaaatattgggccttTTGGGGGGGGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatcgctcg
atttttttagtcaaagcacttgttatacatttttggaaagctaaggggta
ggggaatcaaaataacttgggtgccaattttcttTCGGACacttggtgtg
attttcggacaaatacgacggtctcaggcaaaaatcatagggtgaaaaat
taatgaaaattttagcttgagaaaacggaaaggtctcaaaaaattaagat
tagtgatatattgcgagtataggtgatttcagtacctaactcgagatatt
gagcttccgaaagcgcaaaaactggacaaaacaNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNtccgaaaatcacaccaaagtgtccgaaaaaaaattggc
acccaagttattttgcttcccctaccccttagctttccaaaaatatataa
caagtgctttgactaaaaatgtcgcgcgacctcaaaaaaacgaacaaatg
tCCCCCTACTACAGGttaggggagggggtgcgaaattttttttggatttt
tcaaaatatcctccacccccctctagtagatactttatgaccgctccctt
agaccaacttacggatTTCTGCTAATTCGTCCGTACTGCAATCCCTGGAA
AGTGGTGACTTATAAATGAAATGAATGTAATTTCCACAACTGATGTTTTC
CTTTGAGACTCTTTAACACTTTTtggctctcttattcgatttttaGTATA
AAAAAGGGCCTCTATTTAAGACGTagagtttgaaatttgaacATACAAAA
AACGTATGTCGATACCGCAAGGTAATCGATATTAGGCAGATAtctcattg
aaaataatcaattgCTCATCGAAAATCATTGGCTAAACCGctaaatattc
aatattcacaatttttttgaaccTGATTAGCTAGATTTTAATAGATAACT
GATCGATCGATTAAGATCCATTATATATCCATTTAAAACAATGATCGATT
TTATTAATTACGACTGTCGAGATATTGCATAATAATGGATAGTAACCTAG
ACTTGCATCACGTGGGATTTTTGGCTTGGTTTattgatgttcttaacttt
ttgtatTATAAGGGCCCCTTCTTATAAgcctaatcgcacgatgggttatt
ttttcttatttggcacgccctcaaagagagcaaatAATcattaattgcat
cctgtagagagcaattaatcgttaatcacactcttcaatgctGCACCAAT
GtctacaaaaatgattttaatgtttttttcttatcGAACATTTTTtctgc
atcgaacgttttaattgcattcgaaattcattttgtgagaaagatttaga
aaattaataaacaacaataaaagaaagacacagagagaagagaaaaatat
taataggggggggttcatggttggcggaggagcggaatcggccctttttt
cggacggagtggcggaatttggcgaaaatttagacggaattacggaaatt
tggttctctgacggagatggaaaattaaacaattttaatgcggaaaaacg
gaatttagcaaaaaaaattgcggaatttcggaattggtaaaagatattca
aaatttgcggaatttaagatttgttcaatttaagacggtttgacggaaat
tggagaaagaattggcggaattgcggaatcgggtaccccctgaaaccccc
ctcTTAatactctcagtgtaatttctgtaatttactttcctagctgggaa
aaagtagtgaaagccattgtgcgattagcttgtaatcacataataactcg
tacaattcgaaaattgcacatAAACATAAATCCCATATTGGGCATATTAC
ACTCTGCAGTATGCGATAACTAATACATATCCAGATAtaaatttatctcg
agataaatatcCAGACAtaaatttatctcgagataaatatcCAGACAtaa
atttatctcgagataaatatcCAGAGACAAATATCCAGAGATAAATTTAT
GTCGAGATAAATATCCAGAGATAAATTTATCCCGAGATAAATATCCCGAG
ATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TCAGGTTAATACTAAAAAAATAGCAGGCttcgaaaaattttggatgctct
taaaaaaacgtgtatacgattaaaatatttttttgcattaAACACATTAG
AGGCATTTATCAAATCTTATAATCATTATGATGTTTTAATATCATTTTTT
GATAGACAAAAAAATGATACATGTTTAAAatagtttatcatttttttGAC
CGGCTGTGAGTAACAGCTTGTAttttttaatgacattttgatttttattg
acGCTAGGAGGTCATCACAGGAgtttttatgtaattttttgaaagttttt
taaaagtttttctctACGGTGATTGTTTTGTTTAACTTTTCATAAATTGT
TTGACTTGATTCTTAACACATTATAGAAAGGTAAACTCTGTAGGATTGCT
CTTAATtgtagtttgaaaaaactttacaTAAGGAGCATACAAAATATTTG
TAACCAGATCTGACTTGTGAAAACATTGTTGTTATTTCTTTAGATAGTGA
TATGTTAACAAGTTAATACATGAAACTCGAGAGGACTGCAACAACATCAA
ACTGAAACAAAgtatcattcagtcaaaataaGAGAATCGAAGGATTCTCG
GTGGAAAGTGGGGCAGTTTCTCAGGCTACACTGACACATTTTTAGCCTGA
AAACacataaaaaagaaatgtcaACGAAAAAGAACTCAGACTTACATTTA
GACTTGCGTGAAGTGTTACGTGATGCGGACCCAAACGCAGAACTATCGTG
CGTTGTACGTGACCCGAACGGACAGAACATTGATTCAGCAATCGAAGTAT
CGAGTGCTCGAGGACGAAATGTGAAATTTTTCCCGAAACTGACCGGCAAA
CACAGCGTTTATTTGTATTATGATACAGACTTGGTTCCTGGGTCACCTTT
TATCATTGAGGTATTGCAAAAACCGAAATTGATAAAATGAGTTTGATTGT
GGTATATGGACTTGTATGGATTCGGATATTTGTGGCGGAGCGGTTGTATA
TTTTAATTGTTAAccctttatatttttttcattatttaaattcatattgt
TTTCTTGGCTAAAAATGAAACAGTGAAGTCTATTCCAATGgcaaattgca
aaaatgacagTCCGCACTTTTCGGTACTTTgctcttgaaagaaaaaatat
tgaaaataat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001178XLOC_001178Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002228-exon-sc0000019-1491911889:12206..12230TCONS_00002228-exon-sc0000019-1491911889:12206..12230Clytia hemisphaericaexon
TCONS_00002228-exon-sc0000019-1510915933:12206..12230TCONS_00002228-exon-sc0000019-1510915933:12206..12230Clytia hemisphaericaexon
TCONS_00002228-exon-sc0000019-1575043694:12206..12230TCONS_00002228-exon-sc0000019-1575043694:12206..12230Clytia hemisphaericaexon
TCONS_00002228-exon-sc0000019-1491911889:25499..26165TCONS_00002228-exon-sc0000019-1491911889:25499..26165Clytia hemisphaericaexon
TCONS_00002228-exon-sc0000019-1510915933:25499..26165TCONS_00002228-exon-sc0000019-1510915933:25499..26165Clytia hemisphaericaexon
TCONS_00002228-exon-sc0000019-1575043694:25499..26165TCONS_00002228-exon-sc0000019-1575043694:25499..26165Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:12206..26165 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.1285	19.9393	27.0727	30.7202	1.08097	0.372607	0.656707	0.369118	1.3295	1.25887	0.722959	0.830045	0.83173	0.396177	0.530721	0.615765	4.93584	5.70941	1.86325	1.98882	20.334	20.1709	20.0001	22.7691	1.7195	3.99514	8.71673	6.30986	4.8149	5.3169
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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