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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002224 ID=TCONS_00002224|Name=TCONS_00002224|organism=Clytia hemisphaerica|type=transcript|length=991bp
ttttcccaaatctctgattaatctaatgttcacaacgtcgaTATGaagtt
agatgaacgttaaaacaacatcgtgtgccagctggattTGTATTCCCAAA
ATTGCGTTTTTCATGTCATTTGTAATTCATCtagggaaaatttttgtaca
caGAAATCAGTTCAACACTGAGAGATGTGAGTGAGTGTCTTGTGTGTGAG
AGGTGCGTTTTACTAAAGTTTAATTTACTGTATGCGTTGTCTTATTTCGG
TTCTTTATGGTTTTGTAGCATTTTAAGTTTGTTTAAGTTCAAGAATTGGT
GTTTgccttttacattttttgttgtctgttttctgttttgtttccTTAAG
TTAGGTTCCTTTTTACTTACTTAAAGCTGAGATATTTCGACCAGTCATAT
TATTCAAAACAAATTCGTCTTCTACTCACAACTGGTAAAGCTTAtcaagg
aaaaaaatttcggtcaattttttatatttactaaACTTAAATCTATGAAT
GTAAATAACTACCATACAATGTTAAATACGGATAGgtataaaatcttgaa
aaatgaaTCGATAATACTATCGTGCGAATTCAGACAGACTTATATGCAAT
TAATTGGTCTTGTGAAGCCCGGAATTGGAACTGCAGAGTANATACTATCG
TGCGAATTCAGACAGACTTATATGCAATTAATTGGTCTTGTGAAGCCCGG
AATTGGAACTGCAGAgtaaatttgccaaatttgagtacaatcatggtcaa
aatatattgagaattccggttattttaacgttttccgacaagaaagtcga
ttttgggctgtCTCTTTAAGTTAatataatatttcaatttgggatggGTT
GGCCAACTTCTAGGCTATActatgagccttattggactatttttgaactt
ttgtatcctcagatcctaaggtctctAGCGtcaaaactcagagttaaaac
tcaacctttcgaacctactttagagtacttacaaatcgatt Run BLAST on NCBI transcript from alignment at sc0000018:990250..991240 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002224 ID=TCONS_00002224|Name=TCONS_00002224|organism=Clytia hemisphaerica|type=transcript|length=991bp|location=Sequence derived from alignment at sc0000018:990250..991240 (Clytia hemisphaerica)
aatcgatttgtaagtactctaaagtaggttcgaaaggttgagttttaact
ctgagttttgaCGCTagagaccttaggatctgaggatacaaaagttcaaa
aatagtccaataaggctcatagTATAGCCTAGAAGTTGGCCAACccatcc
caaattgaaatattatatTAACTTAAAGAGacagcccaaaatcgactttc
ttgtcggaaaacgttaaaataaccggaattctcaatatattttgaccatg
attgtactcaaatttggcaaatttacTCTGCAGTTCCAATTCCGGGCTTC
ACAAGACCAATTAATTGCATATAAGTCTGTCTGAATTCGCACGATAGTAT
NTACTCTGCAGTTCCAATTCCGGGCTTCACAAGACCAATTAATTGCATAT
AAGTCTGTCTGAATTCGCACGATAGTATTATCGAttcatttttcaagatt
ttatacCTATCCGTATTTAACATTGTATGGTAGTTATTTACATTCATAGA
TTTAAGTttagtaaatataaaaaattgaccgaaatttttttccttgaTAA
GCTTTACCAGTTGTGAGTAGAAGACGAATTTGTTTTGAATAATATGACTG
GTCGAAATATCTCAGCTTTAAGTAAGTAAAAAGGAACCTAACTTAAggaa
acaaaacagaaaacagacaacaaaaaatgtaaaaggcAAACACCAATTCT
TGAACTTAAACAAACTTAAAATGCTACAAAACCATAAAGAACCGAAATAA
GACAACGCATACAGTAAATTAAACTTTAGTAAAACGCACCTCTCACACAC
AAGACACTCACTCACATCTCTCAGTGTTGAACTGATTTCtgtgtacaaaa
attttccctaGATGAATTACAAATGACATGAAAAACGCAATTTTGGGAAT
ACAaatccagctggcacacgatgttgttttaacgttcatctaacttCATA
tcgacgttgtgaacattagattaatcagagatttgggaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002224-exon-sc0000018-1491911889:990250..991240 | TCONS_00002224-exon-sc0000018-1491911889:990250..991240 | Clytia hemisphaerica | exon |
| TCONS_00002224-exon-sc0000018-1510915933:990250..991240 | TCONS_00002224-exon-sc0000018-1510915933:990250..991240 | Clytia hemisphaerica | exon |
| TCONS_00002224-exon-sc0000018-1575043694:990250..991240 | TCONS_00002224-exon-sc0000018-1575043694:990250..991240 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018 | supercontig | sc0000018:990250..991240 . |
Blast
The following BLAST results are available for this feature:
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