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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002223 ID=TCONS_00002223|Name=TCONS_00002223|organism=Clytia hemisphaerica|type=transcript|length=917bp
TCAAAacatttcgcccttagggttttgcctggggaaaaaagaaattgccc
aaaaagggaatgttccaccagtgggattctAGGGGATTTTTTTCCTGAGg
aataagcatcctatagagaaggtctggagaaagtttcagctatatgttat
ttttttcctgtaaattatgctaaacgactaAAATGGAGCGATAAAATCCC
TATTACGATAATTTCGTCAGCATAGAATATTCATACATGTGAAATAATTT
ATTATATTGCACATATATAAACCATACACCTGAAATGCACCTGTAATGCA
CCAGAAAtgattactttaggcgtaaaaCTTTcgtgagcagaaactttcgc
gaatttgaggaaaGAATGTTAAtcacgagcataaactttcgcgaaccgtt
ggataaaaatgagaattttcgaatCAAAATTGCCTTCAAAGTGAAGAATG
TTCCTTAAATCCGATAAAGAcggttgctcttcgactttaaaaGGGCATTA
AAATGAGGTTTTAaagatttccattttttttgagaatttttcgcgagcat
aaaatttcgcgaattaccttgttaagaattttcaaagacatttgctTTCG
CGAAAACGAAAATCACCAAACTTTCTGCTCGTGAAAGTttatacgcctaa
agtagttttAAACTAGTTAGTTCGTTTATCTTAATTGAATGTTGAcaaaa
aagccttgaaaattATATCCGTACTTCATTTTCTAGTGGTTTCCTGTAAC
GTCTTCCCCCGTAATCCTGCAGAATATTTTGATAATGAGTTAGGGACGTT
ACACTCACACACCTAGATATCATGCTAATGCACGAAAAATATGACCTTGT
AAGATTTATAAAACtgtacaattttttcaaaaaatttcaagaattataAG
GCTCAATTTTATCCTTC Run BLAST on NCBI transcript from alignment at sc0000018:939821..940737 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002223 ID=TCONS_00002223|Name=TCONS_00002223|organism=Clytia hemisphaerica|type=transcript|length=917bp|location=Sequence derived from alignment at sc0000018:939821..940737 (Clytia hemisphaerica)
GAAGGATAAAATTGAGCCTtataattcttgaaattttttgaaaaaattgt
acaGTTTTATAAATCTTACAAGGTCATATTTTTCGTGCATTAGCATGATA
TCTAGGTGTGTGAGTGTAACGTCCCTAACTCATTATCAAAATATTCTGCA
GGATTACGGGGGAAGACGTTACAGGAAACCACTAGAAAATGAAGTACGGA
TATaattttcaaggcttttttgTCAACATTCAATTAAGATAAACGAACTA
ACTAGTTTaaaactactttaggcgtataaACTTTCACGAGCAGAAAGTTT
GGTGATTTTCGTTTTCGCGAAagcaaatgtctttgaaaattcttaacaag
gtaattcgcgaaattttatgctcgcgaaaaattctcaaaaaaaatggaaa
tcttTAAAACCTCATTTTAATGCCCttttaaagtcgaagagcaaccgTCT
TTATCGGATTTAAGGAACATTCTTCACTTTGAAGGCAATTTTGattcgaa
aattctcatttttatccaacggttcgcgaaagtttatgctcgtgaTTAAC
ATTCtttcctcaaattcgcgaaagtttctgctcacgAAAGttttacgcct
aaagtaatcaTTTCTGGTGCATTACAGGTGCATTTCAGGTGTATGGTTTA
TATATGTGCAATATAATAAATTATTTCACATGTATGAATATTCTATGCTG
ACGAAATTATCGTAATAGGGATTTTATCGCTCCATTTtagtcgtttagca
taatttacaggaaaaaaataacatatagctgaaactttctccagaccttc
tctataggatgcttattcCTCAGGAAAAAAATCCCCTagaatcccactgg
tggaacattccctttttgggcaatttcttttttccccaggcaaaacccta
agggcgaaatgtTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002223-exon-sc0000018-1491911889:939821..940737 | TCONS_00002223-exon-sc0000018-1491911889:939821..940737 | Clytia hemisphaerica | exon |
| TCONS_00002223-exon-sc0000018-1510915933:939821..940737 | TCONS_00002223-exon-sc0000018-1510915933:939821..940737 | Clytia hemisphaerica | exon |
| TCONS_00002223-exon-sc0000018-1575043694:939821..940737 | TCONS_00002223-exon-sc0000018-1575043694:939821..940737 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018 | supercontig | sc0000018:939821..940737 . |
Blast
The following BLAST results are available for this feature:
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