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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002206 ID=TCONS_00002206|Name=TCONS_00002206|organism=Clytia hemisphaerica|type=transcript|length=2068bp cCTTCTTTGAATTTTAGGTCGAATGAGAAAGATATAAAAGAATTGGTCAC AAAAGTTGTAGCAATGAATGATCTGCTGCAAGAATCTTTGGGGGAAAGCT TAAAATTCTTTAATCGGAAAGAATTTTAATATCATTTTAATGATTTAAAA GCACTAAATTCTATTTAAGCAAAGGCATGATGCAAGAAATTCTTTCTGGT ATCTATTACAGTATGCCAGAAGcagatttttactgtttttactATTATTT CTTATGAGAGAAAGTAGAAACTCTTTCAGTTAGGAAGCATGATAATATTG GCCAATACTTTTCTCATATTACAATTCCAAGCTAAATGGTGTTTGCTTTT AGTCGCCATGTTTATCATATTATGACGTAATCATTAAAAACCAGATCAGC CCAAAAAGACCGGTTTCGCtcccaaattaaaaaaatatatggttttCGTA TTAAAAAGTACCTCCAAAACAAAACCCCCGCTCAAAGAGTTTAATTTGTC CCTGTTAATAAGGACGCCAAACCCTGTCAGCTCTGATAGTCAAGTAATTG ATATCATACAATAAGATAATGGGGATTCTAACCTTGGTTAAAATATTGGG CATTTAAAAACCTTTCTAGACAGTTTGATATTGGGAAGTTTTAAGTGACC TAAGATTAGATATCATAATCTTTCCAAAAGATTAAAGAGATCAGTAAAGA ATATGAACCACAATATTTTAATATAGGTAGGCATGTGAGAGCATGACATA GAAATGAAAGAAAGTAAGAAAGGCATTCAAAAGAATAAATACACCAAAAT GATTGATTCtgcatttttcaagaaaataagtTACTGGGTAAGAACACCTG GCTGACCTAAGCACTAATTGTAAAATGTCTTTATACCTTTCACTCCGAAT caaagaaattgatttaaattaATCTTACGAGTAATAAGCGGGGGACGTGA TACACCCCATTgacagtctgttcctctaaagaatcctgtattgtaacacg catgcgtaattttgtcgttcttttaaaccacatgtagttaattcctgtgc gtgataaacaaagaggaatgagtaacatgtcgttttttatgaaatttgtc gttctttttgtctatttttagtaaagcaggattctttagataaaccccct ctgATATATACAATACGATATAATGGGAAGTTTAACCTTGTAGTATTCCA TATAATTGTCGTTTCAAAACTTTGGGATATTAGATAAACTTTGCGAAGTT AAAGTGACTTAATTGAATACTAAGAAGTTTTTTCAGTCATCTATTGAAAA AGCTTTGAGATCAAAGATTGCAGATCAAAATCTTTCGCAGATTACAGAGA ACAAAATTAACGTGAACAGCCAAGTTTTAAGATCGACATGCAAGTGAGAG GACGGCATAGGCATGCTAAAAGAAAGGGAATTTACAGATTAGATATATAC TGATTCTGTTTTATCTTGAAAGAATATGAATCAGTGGAAGGACACCTATT GACCTTTAAAAACTAATTATAGAATGTCTTATACTCGGAATCAATAAAGA TTGAGAAAATAAATCTTCTATAGGTAAGGTGAGGCATACAGTACTTGCAG CAATTACTCATGGCGTGGATCACATGCTCTTATGTTAAGATGAACACTTC AGCGATACAATTTGATAGAACATGCCAAGTCGAATCATACGACGTGGCac cttttaaaaaatctaaaagggAGTGTGTCGGAGAGCGTGATGACCAGAGG GAAGAACATTAAAACCTAAGCAGGTCCAGTACAGTACAAGACGAGGACGT TCTTTTGGATTGGCTaggttttaaatatttatttgatCGTAAAATACTCC ATTTTAGGAATATAATGTCTTTATTTTCTTGGGTGAGATCATAAACATTC CTCGGAAAGGTTTTGATTGATGTAAAATCGAATTAATAGCTTTGCTATTT ACGTTACCATTTTATTAGAAATTACTGAATTCTAATGAACCCTCTACCCA ACGTAAAGCCCAAGTGGTCTTTCTTGAAAAGCTACATccccttaaaaaag ggggggttcGCACTTTGC Run BLAST on NCBI transcript from alignment at sc0000018:403821..405888 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002206 ID=TCONS_00002206|Name=TCONS_00002206|organism=Clytia hemisphaerica|type=transcript|length=2068bp|location=Sequence derived from alignment at sc0000018:403821..405888 (Clytia hemisphaerica) GCAAAGTGCgaacccccccttttttaaggggATGTAGCTTTTCAAGAAAG
ACCACTTGGGCTTTACGTTGGGTAGAGGGTTCATTAGAATTCAGTAATTT
CTAATAAAATGGTAACGTAAATAGCAAAGCTATTAATTCGATTTTACATC
AATCAAAACCTTTCCGAGGAATGTTTATGATCTCACCCAAGAAAATAAAG
ACATTATATTCCTAAAATGGAGTATTTTACGatcaaataaatatttaaaa
cctAGCCAATCCAAAAGAACGTCCTCGTCTTGTACTGTACTGGACCTGCT
TAGGTTTTAATGTTCTTCCCTCTGGTCATCACGCTCTCCGACACACTccc
ttttagattttttaaaaggtGCCACGTCGTATGATTCGACTTGGCATGTT
CTATCAAATTGTATCGCTGAAGTGTTCATCTTAACATAAGAGCATGTGAT
CCACGCCATGAGTAATTGCTGCAAGTACTGTATGCCTCACCTTACCTATA
GAAGATTTATTTTCTCAATCTTTATTGATTCCGAGTATAAGACATTCTAT
AATTAGTTTTTAAAGGTCAATAGGTGTCCTTCCACTGATTCATATTCTTT
CAAGATAAAACAGAATCAGTATATATCTAATCTGTAAATTCCCTTTCTTT
TAGCATGCCTATGCCGTCCTCTCACTTGCATGTCGATCTTAAAACTTGGC
TGTTCACGTTAATTTTGTTCTCTGTAATCTGCGAAAGATTTTGATCTGCA
ATCTTTGATCTCAAAGCTTTTTCAATAGATGACTGAAAAAACTTCTTAGT
ATTCAATTAAGTCACTTTAACTTCGCAAAGTTTATCTAATATCCCAAAGT
TTTGAAACGACAATTATATGGAATACTACAAGGTTAAACTTCCCATTATA
TCGTATTGTATATATcagagggggtttatctaaagaatcctgctttacta
aaaatagacaaaaagaacgacaaatttcataaaaaacgacatgttactca
ttcctctttgtttatcacgcacaggaattaactacatgtggtttaaaaga
acgacaaaattacgcatgcgtgttacaatacaggattctttagaggaaca
gactgtcAATGGGGTGTATCACGTCCCCCGCTTATTACTCGTAAGATtaa
tttaaatcaatttctttgATTCGGAGTGAAAGGTATAAAGACATTTTACA
ATTAGTGCTTAGGTCAGCCAGGTGTTCTTACCCAGTAacttattttcttg
aaaaatgcaGAATCAATCATTTTGGTGTATTTATTCTTTTGAATGCCTTT
CTTACTTTCTTTCATTTCTATGTCATGCTCTCACATGCCTACCTATATTA
AAATATTGTGGTTCATATTCTTTACTGATCTCTTTAATCTTTTGGAAAGA
TTATGATATCTAATCTTAGGTCACTTAAAACTTCCCAATATCAAACTGTC
TAGAAAGGTTTTTAAATGCCCAATATTTTAACCAAGGTTAGAATCCCCAT
TATCTTATTGTATGATATCAATTACTTGACTATCAGAGCTGACAGGGTTT
GGCGTCCTTATTAACAGGGACAAATTAAACTCTTTGAGCGGGGGTTTTGT
TTTGGAGGTACTTTTTAATACGaaaaccatatatttttttaatttgggaG
CGAAACCGGTCTTTTTGGGCTGATCTGGTTTTTAATGATTACGTCATAAT
ATGATAAACATGGCGACTAAAAGCAAACACCATTTAGCTTGGAATTGTAA
TATGAGAAAAGTATTGGCCAATATTATCATGCTTCCTAACTGAAAGAGTT
TCTACTTTCTCTCATAAGAAATAATagtaaaaacagtaaaaatctgCTTC
TGGCATACTGTAATAGATACCAGAAAGAATTTCTTGCATCATGCCTTTGC
TTAAATAGAATTTAGTGCTTTTAAATCATTAAAATGATATTAAAATTCTT
TCCGATTAAAGAATTTTAAGCTTTCCCCCAAAGATTCTTGCAGCAGATCA
TTCATTGCTACAACTTTTGTGACCAATTCTTTTATATCTTTCTCATTCGA
CCTAAAATTCAAAGAAGg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00002206-exon-sc0000018-1491911889:403821..405888 | TCONS_00002206-exon-sc0000018-1491911889:403821..405888 | Clytia hemisphaerica | exon |
TCONS_00002206-exon-sc0000018-1510915933:403821..405888 | TCONS_00002206-exon-sc0000018-1510915933:403821..405888 | Clytia hemisphaerica | exon |
TCONS_00002206-exon-sc0000018-1575043694:403821..405888 | TCONS_00002206-exon-sc0000018-1575043694:403821..405888 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000018 | supercontig | sc0000018:403821..405888 . |
Blast
The following BLAST results are available for this feature:
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