TCONS_00002171 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002171
Unique NameTCONS_00002171
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3544

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002171 ID=TCONS_00002171|Name=TCONS_00002171|organism=Clytia hemisphaerica|type=transcript|length=3544bp
AGCAGAAAGCAAAAAAAagctGAAAGCCAAGGCACCAGGTCAAAGCACAT
TTATTTTGTTTCAGATGAGTTTGAACTTGgTTTGATGACATCGGCATGGT
AAAGAGGAATCTATCTGAAAGAAGTGATGGGTCTACCAAACTAAGCAAGA
AAGATAGCATCAGGAGTACAGGCAGTAGCACTAAAGGACCCAGAAGAAAG
GAGAGCTTCAAATCCAGCAAAAAAGATGGTTTTCGATCCCCAGAGAAAGA
GAAGAgaacaagcaaaaagaaaagCACTGTTTCATTCAATGTATCTCCAA
GggtggaaaaaataccaaaCCCTAAGAAACGTTCAGTAGCTAATCTCAAT
CAACAAGAAAACAATGAAGAAACTCCTGAATTGTCTCATAATGACTCTCG
AACCAGCTACATCCCTTTTGAAGAAGAGAATTCATTGCCAGAATTGTCCC
AAGCCGTCATTCAgaagaaaatggggaaaatgaTACATTTACTTGATACA
AGACCGATGAATTATGTGTGTGTTACTGATCGGAGGAACAGAAACTGTCT
CCATTATGCAGCCTATCTTGGTTATACAGAAATACTTGAAACACTTTTAA
ATCGTACAGATGCTCATAAGATTATCAACGCAAAAGATGACTCTGGAAAA
ACTCCACTTTTCAAGGCAGCAGAAACAAGTTCTTTGGCATGCGTAGAAAT
TCTCCTTAATCATGGTTCTGATGTCACCATACAAGATAATGATGGTATAT
CGGTCATGCATGTTGCCACTCTTGCTGATAACGCGATGGTGATGAAAACA
TTGTGGAAACACAAAGCTGACCTCAATACTAAAGACAAGCTTGGCTTTAC
ACCGCTCCACTTGGCAGCAGGGCTTGGCTTGAGAGGTCCCACACATTTTC
TCTTGAGGCACGGTGCTGTGGTGGATCCCATCGATGGGAAAGGAAGAACA
CCCTTGTTAGCAGCAGCTGCAGATAAGAACGTGGAAATAATTGAGATACT
TTTGCAACATGGTGCGAATGCTACCATACAAGATGATAGAGGAAGGACAG
CAAAGAATATCTTCTCTACTCTAACTTTAGATAGgagattTTCAGATATT
CAACCGACGCGAACTACTTCATCACACCATTTTCCATTTGAAATGATAAC
AGGACGTACCAATAGTTTTATAAACGATATCAAGAAAGTCCACGATCAGG
GTGCTGTTGACGATGCATCAAGACGTGGTAGTACAACCATAACACCAAGA
GGGTCAGCTGCCAATACACCTAAATTTGATGAAATGATGAAAGGACCACA
ATTCAGTTTTGATGAAAAGGATATAGAACAACATCAAGAGCAATCGAAGC
CGATTGAAAAAGTCAAAGACGAATCGTCATACAAGAACCTGATATCACCA
ATCAATTGGAAAAACATATTAGAATCTCCAAGAAGGTTAAAGAAATCTTT
TTCACGTAGCGATTCTAATAAATACACACAGAAATCTCCTACTAAAGCTG
GATCCACAAAAAGATCTTCGTTAAAAAGATCGAAGGCAGTAGTCGATGAA
GATCTAATTATTCCGCAGCTAGAATTTGATCTGGCTCAAATGGATGCTGA
AGACAACCTCAGTGATCGGTCTCGTACAAGCTCAAGACAAGGTTCATTCA
GAAGCCGAACAGATTCCATCAACAGTGTTCGACAACAAGCCAAATCGTAC
CAAGCTGCACCTTCACCGAGAATGGGTTCTGCAATGTCTCAACGAAGCTT
CTCAGATCCTAATCTGGATCGGATTGCTGAGGAGGAATATCATGAGAGCA
ATAGGCCATCTTCTCGTTTGAGTCAACGATCTCAACCAGATGATATCGAA
AGAGAATTTCTTACTAATCAACAACTACAAAACTCCTACACAGAACCTTC
TTACAACAACCCTCCTCTTCAACCTTCAGCCAGTTCCCTTCAAGACAACA
ACCTTCCTATTCAAGACAAAACTCTCAACAAGCAGATTACTCTCATTCTC
AAAATTCCAAACATAGAAACTCCACATTCAAGAGGAATGTCTCTATTGAA
GAGCCTATATCCAGAACATCAGACCAAGGCAGAACACATACAATGGATCA
AACATCAACGAAATCAAACGTCACACCAGCTTTTGAAGAAGACCGATACT
TGTATATGTGTCTGAAAAATCGTGAATTGCTTCTGAAGAAAATTAAACAG
TGTGAAGATTTGGAATCTGAAATCAAGAATGGACAAACAGATGAACACAA
TAATGCGTCTTCGGAACATCTGAAAGAGACATCGCTGATTGACGAGAACA
GTGCTTTACGAGACGAGCTTCGAGAATTGAAGAAAGAAAACCTCACTCTT
AACGAACACATTCTTTTCAATAAGCGGAAGAAACCGTCCAGAAGTCGTGG
GAACAGTCGGTCAAGATCTAGAAGTCAAAGTCGTAGTAGATCGCGATCGA
GAAGTAAGAGCCGGGAACGATTGGATCAGAGTCgcaagaatcttcccgat
ccaAACCGATCGCAACAAACACCCGACAGTGAGTATGAAGACCTCGAACG
TGAAAATTCAACGAGTGACGGTGAAGTGAAACCGCCCGAGCGTTCTCGGC
GCCGAGGACAAGACTCGAGGAATACCGAATACAGTGACGAGGGATTCTCG
CCTCACGAATCTGAAGACGAAAGCGAGTACAGTTATTCGGAAGGCGATTC
GTATTTCCAAGAGACAATCAACAAACTTCTTAAGGAGAACATTTTATTAA
AACGATCACACAAAGCATATGAAAGATGTCACAAAGAGTTGGAGGACGAG
GTCGTGGAACATAAAACGACCATCAAGAACCTCGAAGAAAAGTtacaaga
agaagaaaagaagagagaaaaagctgAGAATGATTACGAGGAGTTACAAA
AAGCTCATATTGCGTTAGAACAAGCTCATATTGAGCTGGATTACGGAATG
AAGAAGATGTTAGAGGATAATGTTGATATGCGAAAAGACTTGACCTTCTT
ACAAATCAAGAAAGAAAAGGACTCGACGGACAAAGGAGAGGTTGAGCAAG
AACCACAAAGTTCCTTTCGTAAAGCATTCAACAGATTTTCACCACAAGAT
GGTGGTAAACAAACGCCACCGAAGCGCCCTGACCCGCCTACACGCCCTAC
ATCAGGAGTTTCAAACAGTACAAACCTCTCAAAGGATTCTACCACTAAAC
CTAAAATACCTGAACGCCCGAAACCATTTGCTGATACCCGACAGAAAGCT
ATTCCGCCCCCGCCATCAACATCGAAACCATCTTCACGTCCACGAAGTGT
CGAACTGGATCTCAAACccatcaagaaaaaaaaaaagagaCGAAAGATGT
TCATCCTCTTCTAAACATTCGTAAACCTACTGTAACAAATAATTATAAAC
TGTAAATATATAATTATTAAATTAGATACCTATAAACCTATAAACTTATA
GTAAAATGTAAATAATTAGAACTGTGAATTTTATAGCtaatttttaaatt
ctttttaaatcttaatataataattttaaattgATTCTTAAAAG
Run BLAST on NCBI

transcript from alignment at sc0000018:863703..875528-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002171 ID=TCONS_00002171|Name=TCONS_00002171|organism=Clytia hemisphaerica|type=transcript|length=11826bp|location=Sequence derived from alignment at sc0000018:863703..875528- (Clytia hemisphaerica)
AGCAGAAAGCAAAAAAAAGCTGAAAGCCAAGGCACCAGGTCAAAGCACAT
TTATTTTGTTTCAGATGAGTTTGAACTTGGTAAGTTAATGAATTTTCTTG
GTCTAGTGTTTCTAGGCACATATGGTAATTGTCGAATTTGGATACAGTTG
GTGGTGGGGGGGTCCAACTACATACCGATAAAAAAAACAAGTATTGAGAC
AAAAATCCTTTCAGCCAATTTCTTTTTGATTTCGTCCACAAACTCCACTG
AAATCATATGATTTCACTTGCTTTCACCTTTGCGGAAAAAACTCTTGTCT
AATGCTCACTCCGACATTTTAAATTTTCCGGGGGTTTTGTTGTTTGGAAT
TGCTTAGGTCAGGATTGCCAGTAACGGCTTGTCACTGTGCCGGATGGGGA
TGCATACATGGCGGCTTGGGCCCCGCAGGGCTGCTATTAACGGCTCGAAT
TTCAGTCAGGTTAAAAAAGGGGCAATTTTACTCATATTATAATAACATTA
CCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTGAAAAAGGATTATTCCTCTCTGACCACTAAGCAAAGAAAA
ACAGTTTCAACCTTTCTATAAATTTCAGCTGATAAAAAGGGTGTCAGAAT
TAGAGGAGGTAGGCTTAGAGTTACGGTAGGTTGTCGCGTTCTCCAAAACA
ATTATGTCGACATCCCTCTTCTTATTTCCACAACCTTCTTTGGAGATAGG
GAATAATAGGAAGGTCGGAATAACTGATAGACAAAAGATTTTTTCTTCTC
GCTTACAGTAAGGCAAAGAAAATTAGTTTCAATCACATAGAATGCACCCC
CGAGTGTTGTGTAATAGAACTGGGGCATAGCTGATAGGTTGAAAATATTA
TATTTAAATTATGTTAAAAATCTATGCCGTGGTGAAGGTTTTATCCCTCT
TGAAAAAATTCTTGTCTGCGGCGCAATAAATTTATCCAGGATTTGCATGC
AAAGTTTCTTTGATATTTTGCTTTGTGAAGGTGGGGGCTATGTCTCTAGA
ATTTAGCCGGGGCCTATTTTCTTATTTTCACATAATATCATTCCCCCCTG
AAAAATGCTGGGGGTTGGACCCCTCCTGCACACTATGAATCAGCATTTTC
GACCTTCCTATTATTCCTATCTCTAAAGAAGGGTGTCAAAATTTGAAGAG
GGATGACGATATTAGACCAACTTACAATACATACAGGGTTATCTTGCTAG
CTATAACTTTCATGCTTCATAAACAATAATAGTAATTTGGGTGGGGAGAG
AAGGCGACGGTCTTTTAAATATTGAATAACTATATATCGATCAATGAAAT
GTCCAACCAAAATAGATTCTGATCAGACATTATGTCCAACCCATATTTTC
AGTCCCTTAAAAAATTAAAAAATCAAAAAATTACGTACATTTGAAATTTA
TTAGCAACCTTATTATTTACACAGAGAAACTCTCTGCAGTTAAAAATGAT
GTCCTCTATTCATTGTGTTTGAAACCAAACAATTCATCCTTTTTTTCAAG
CTTGCTTCAAATCAAAACCTAATGTCTTTCTAAATTTCTAGCTGGTCTAA
TTTTTTGTCCAACCAAAAAACGATCTCGTCGGACAATCCGACCAATTATT
AGCTAAAAATTCATTTAGACATGTCTGACCCGGATCGATTTGCTTTGGAC
ATGTGCATGTCCGACCATCAAAAGATTGTTATTTCAGGCCCTGCTATGCA
TGATATGCATGATTCAAAAATTTTGGAAGGCATGTTGGAAGATCTGTCTG
GCATTCTAACGATTTCAAAAGGAAATGCATCATGTTTATCAAAAAGTTTG
GTCTTAAATTGCTTATTTTCAATTTGAATATCAAGATCCAAAAATGAAGC
ACTTTTAAAATTTATTACTGTGTCCTTTCTTTGATTCTCAGGTGGATGGG
TATCTTTTAGATGTTTTTTAAATTCACTTCTATCATTCATTGCATTCAGG
TCATCAATGAATTTGAATGTATTTGAAAATTTTCTTGCAATTGTAAGATT
ATTTTTTAAGATCTTTGAGCCAATTACTTTCATAATGATATAAAAACAAG
TTGGCCGTCAAGGTAGCCGGATAGGAACCCATGGGAATTTCAATTACCTG
TCTAAAAACACAATCACCACAAGAGGAAAAACATTTTCCATTAAAAACTT
TATAGGTGATTTAACAGAATGAATATTGAAAGATAATGAATTTTTTGAGG
ATTTAGTTACCCATCTAACATCAGGTCTAGCAACAGACAAAAACTNACAA
TCACCACAAGAGGAAAAACATTTTCCATTAAAAACTTTATAGGTGATTTA
ACAGAATGAATATTGAAAGATAATGAATTTTTTGAGGATTTAGTTACCCA
TCTAACACCAGATCTAGCAACAGACAAAAACATGTTAAACAGAAATCGAC
AATCTCATTCAAAACTGAGATAAGTTTATCATGAGGTATTTTTGTATAAA
GCCTGGAAAAGTCGAAAGTTGAGCATAGCATTGCTTTAGTCATTTGAGAT
GATGTTGTCAAAGGAATAAAAGCAATTTTTATGATTTCTTGTACATGTTT
TTTTTTTAAGAAACTAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAA
TCGGCCCTTTGAGCTTTAAATGTTTCTTATAATATAAAAAATAACATTTT
TTAATTCAGCTTTTCTTAAGAACCTTCCAATCCAGTCGCCTCATGGAAAG
CTGGATTGGAAGGTTCTTAAGAAAATCTGAATTAAAAAATGTTATTTTTT
CATTCTCAGTCTTGGCATGTTTCTTAGATGTTTCTTAGTTTATAGGCATT
CTGAGCCTCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAACGTGTAAA
TGACCTACTAGTAATAATAATTATTTTTCAGGTTTGATGACATCGGCATG
GTAAAGAGGAATCTATCTGAAAGAAGTGATGGGTCTACCAAACTAAGCAA
GAAAGATAGCATCAGGAGTACAGGCAGTAGCACTAAAGGACCCAGAAGAA
AGGAGAGCTTCAAATCCAGCAAAAAAGATGGTTTTCGATCCCCAGAGAAA
GAGAAGAGAACAAGCAAAAAGAAAAGCACTGTTTCATTCAATGTATCTCC
AAGGGTGGAAAAAATACCAAACCCTAAGAAACGTTCAGTAGCTAATCTCA
ATCAACAAGAAAACAATGAAGAAACTCCTGAATTGTCTCATAATGACTCT
CGAACCAGCTACATCCCTTTTGAAGAAGAGAATTCATTGCCAGAATTGTC
CCAAGCCGTCATTCAGAAGAAAATGGGGAAAATGATACATTTACTTGATA
CAAGACCGATGAATTATGTGTGTGTTACTGATCGGAGGAACAGGTATCAT
TTTGAAATTTCTGACATAAAAGTTTGTTTTGTTTCCGAATTACTGTCTCT
TTTCATTATCAGTTTTTTTAAATGTTCAACTTTTTGTCCCTCACTAAGGC
CTGAGGGGCAAGAACTTAAAACTGTTTTTTACATTTTATTGTTGCCTTTA
GTTGAGCTAGAATCTGAGAATGTTTGAGAGTTGTCTGTCTGTGTGTCTGT
TCCCAAAAATACTTGGGCAGCCTGGAGACTTCATGGTCTGATTTTTTGGC
TTTTTTGAAATGTTTACTGGTCTTNAAATACTTGGGCAGCCTGGAGACTT
CATGGTCTGATTTTTTGGCCTTTTTGAAATGTTTACTGGTCTTGATCTTC
TAGGGACTGACTGATCTTTATTAAATACAGGATATATATCTTAATTATAA
CTTCAATAATGAGTTTTGCTACTATTTTTTTGTTACTACAATCGGGCCTT
TGAACAATTTGAAGCTACTGAAGATGAGCCCAGACCGTTGGACATGTTCG
ACTATTTAGGTATAATAAATTAAGATTGTTTAAGATTGTAAAGGTTTATT
TAATACTGTAAAACTGCTTCTTTTTTGTAGAAACTGTCTCCATTATGCAG
CCTATCTTGGTTATACAGAAATACTTGAAACACTTTTAAATCGTACAGAT
GCTCATAAGATTATCAACGCAAAAGATGACTCTGGAAAAACTCCACTTTT
CAAGGTCAGTTTTTACCAAAATCTTCTGAGCCTTTCTAAATATCCATCTT
TATCATCATTGCACTGTTTTGTCGATAAGAATCCAGTCACAATAATATTC
GGATTTCTGTCAATTGAATTGTCAAATGTTAACAATTTTGTCCAATTTTT
GTACTGTATTTAGTAAATTGTCTACTTTTCGGTAATTGTTTATAGGCAGC
AGAAACAAGTTCTTTGGCATGCGTAGAAATTCTCCTTAATCATGGTTCTG
ATGTCACCATACAAGATAATGATGGTATATCGGTCATGCATGTTGCCACT
CTTGCTGATAACGCGATGGTGATGAAAACATTGTGGAAACACAAAGCTGA
CCTCAATACTAAAGACAAGGTTTAACTATGACATTTTACTTTCAAAATCT
GCATTAACTACTTTAACTCTAAATTTGATTTAGTATATGGCCAATACTTT
CAGGTAAAGGCTATAACCAATTCAAGGTCGAAGTTTTTAGACAGTCTTGA
TTAAGCCAAAGTAGTTCTTAGGGGTTTCTGGCTTTTTCATGAAATCCTTG
ATGAATTTTCAGAAACACTTTTTCCTAACACTTATTTGAATATGCATGAA
ATGTATGTCTGGAAGAACTCGACACCCCACCCCCTGATCCCAGCCAATTA
TTTTAAGAGAATTTAATGATAATTTTATGACATACATACACTAACAGTCA
TGCAATTTCCATTTAGCTTGGCTTTACACCGCTCCACTTGGCAGCAGGGC
TTGGCTTGAGAGGTCCCACACATTTTCTCTTGAGGCACGGTGCTGTGGTG
GATCCCATCGATGGGAAAGGAAGGTAATATATTTTTGTCTTGTGCAAAAG
TAAGATGTAGGCTTTTCTGTGATTTAAAGTACATATAATTATACTGATTT
TTACAATGCGCTAGTTTTCTAGTCAAATTCTGCCCCTCCAAAATCACTTT
TTGAGCAAGGCTGTTGATTCTGTTTGCTATAAATGAGTCTTGTTGAACTG
GAAGTCACATTAACAATGCTGTTTCCACTTAAGGAGCTGTAAAAACTATC
GTGGATCTTAATAAGGTTCATTCTATTCTTGTTTTTTAAGAACACCCTTG
TTAGCAGCAGCTGCAGATAAGAACGTGGAAATAATTGAGATACTTTTGCA
ACATGGTGCGAATGCTACCATACAAGATGATAGAGGAAGGACAGCAAAGA
ATATCTTCTCTACTCTAACTTTAGATAGGTAAGTAACCACAGTACAATGC
GTTTTTATAAAAGTTATTTGAATGGCTGGGAGACTACGAATTATGACTGA
TATGGTAGTTTTTCAAATTCTGGTATTCTAATTTCTTAATCTAACAATAT
CATGTTATTCTATCGTGGCATCACTTTTCGTCTTTTTGATATTGCTTTCA
AAACCTAGGCCAGTCAGATATTCGCAACCAAACATAATTCCGATGTAAAT
CTACAGTTTTTTTTTCCAGGAGATTTTCAGATATTCAACCGACGCGAACT
ACTTCATCACACCATTTTCGTAAGCTTTATTTACTAGAACAGAGATTACT
GTTTTTTAAAATGTTATGGGAAATATGAGATGAAACTTTGTTATTTTGAA
TTCCTTGCATCCTGAAACCAGCTGCAACTAATGCATTTTATTCCAACTGA
AGAAGAGCAGCAGATAGCCAAATACATCGCTCTAATCCAACCAGAATTCA
TGTAAATTACTATTGTTTGCTGACAATGCATTTTGTTTGTTTACATACAG
CATTTGAAATGATAACAGGACGTACCAATAGTTTTATAAACGATATCAAG
AAAGTCCACGATCAGGGTGCTGTTGACGATGCATCAAGACGTGGTAGTAC
AACCATAACACCAAGAGGGTCAGCTGCCAATACACCTAAATTTGATGAAA
TGATGAAAGGACCACAATTCAGTTTTGATGAAAAGGATATAGAACAACAT
CAAGAGCAATCGAAGCCGATTGAAAAAGTCAAAGACGAATCGTCATACAA
GAACCTGATATCACCAATCAATTGGAAAAACATATTAGAATCTCCAAGAA
GGTTAAAGAAATCTTTTTCACGTAGCGATTCTAATAAATACACACAGAAA
TCTCCTACTAAAGCTGGATCCACAAAAAGATCTTCGTTAAAAAGATCGAA
GGCAGTAGTCGATGAAGATCTAATTATTCCGCAGCTAGAATTTGATCTGG
CTCAAATGGATGCTGAAGACAACCTCAGTGATCGGTCTCGTACAAGCTCA
AGACAAGGTTCATTCAGAAGCCGAACAGATTCCATCAACAGTGTTCGACA
ACAAGCCAAATCGTACCAAGCTGCACCTTCACCGAGAATGGGTTCTGCAA
TGTCTCAACGAAGCTTCTCAGATCCTAATCTGGATCGGATTGCTGAGGAG
GAATATCATGAGAGCAATAGGCCATCTTCTCGTTTGAGTCAACGATCTCA
ACCAGATGATATCGAAAGAGAATTTCTTACTAATCAACAACTACAAAACT
CCTACACAGAACCTTCTTACAACAACCCTCCTCTTCAACCTTCAGGTGAT
TTGAACCAAGACGTTCATCTTAACCAACAGTTACAACAGATAAGCCTCTC
AGCTTCCCAACTCAGTCAACAACTGCAGATGTCTATCCAATCTCGTCTAT
CAGGTTCCTCGGTCCAACCTCAAACTCAACCCCAAATTCTAACTCCGCAA
CCCACCTTAGTCACTCATCAGCCCACTGTTGCCACTCCCCAACCAGTGTT
AGTCACGCCTCAGCCTACATTAATGACTCCCCAACCTACATTCGTCACCC
CACAACCCTCTGTCGTAATTCCACAGCCTCTAGTTACACATCAAGCTGTG
CAAGTTACACCTCGTCATATACACATATCCCAACCCTCAATTCCCCAACC
TTCAATTCCCCAACCCTACCAATATAACCCNACATATCCCAACCCTCAAT
TCCCCAACCTTCAATTCCCCAACCCTACCAACATAACCTAAATCTTTCGT
CTTCCAGCCAGTTCCCTTCAAGACAACAACCTTCCTATTCAAGACAAAAC
TCTCAACAAGCAGATTACTCTCATTCTCAAAATTCCAAACATAGAAACTC
CACATTCAAGAGGAATGTCTCTATTGAAGAGCCTATATCCAGAACATCAG
ACCAAGGCAGAACACATACAATGGATCAAACATCAACGAAATCAAACGTC
ACACCAGCTTTTGAAGAAGACCGATACTTGTATATGTGTCTGAAAAATCG
TGAATTGCTTCTGAAGAAAATTAAACAGTGTGAAGATTTGGAATCTGAAA
TCAAGAATGGACAAACAGATGAACACAATAATGCGTATGTTTCTTAAATT
TTATGTTTGGAAAATTGTTTCCGCCAATTTTCCCAATGGGCCTAAACGCC
TTTTGGACGCCTAATGTACGTTTCTAGGACGTCCAAAGGTCTTAAAGCCG
TCCATTGAATGTCCATAAGACGTTGTGTGCCCATAGTGCTAGAACAATGA
AATTAATATTTTACAACTTCTCCTGAGGTTTCTTTGTAACAGAGATCTTT
CTTGAGGCATGAAAAGATTCCAATATAGCTATGTTCTGTTGGGATCTCAA
TCCCAATTCTTTTCTCGAAGTGTTTTTACAAACGAAGTAAGTACAATATG
ACAATTCTTTCAATATCGTCCGTCTTTAGGTCTTCGGAACATCTGAAAGA
GACATCGCTGATTGACGAGAACAGTGCTTTACGAGACGAGCTTCGAGAAT
TGAAGAAAGAAAACCTCACTCTTAACGAACACATTCTTTTCGATAAGCGG
AAGAAACCGNAAAGAAAACCTCACTCTTAACGAACACATTCTTTTCAATA
AGCGGAAGAAACCGTCCAGAAGTCGTGGGAACAGTCGGTCAAGATCTAGA
AGTCAAAGTCGTAGTAGATCGCGATCGAGAAGTAAGAGCCGGGAACGATT
GGATCAGAGTCGCAAGAATCTTCCCGATCCAAACCGATCGCAACAAACAC
CCGACAGTGAGTATGAAGACCTCGAACGTGAAAATTCAACGAGTGACGGT
GAAGTGAAACCGCCCGAGCGTTCTCGGCGCCGAGGACAAGACTCGAGGAA
TACCGAATACAGTGACGAGGGATTCTCGCCTCACGAATCTGAAGACGAAA
GCGAGTACAGTTATTCGGAAGGCGATTCGTATTTCCAAGAGACAATCAAC
AAACTTCTTAAGGAGAACATTTTATTAAAACGATCACACAAAGCATATGA
AAGATGTCACAAAGAGTTGGAGGACGAGGTCGTGGAACATAAAACGACCA
TCAAGAACCTCGAAGAAAAGTTACAAGAAGAAGAAAAGAAGAGAGAAAAA
GCTGAGAATGATTACGAGGAGTTACAAAAAGCTCATATTGCGTTAGAACA
AGCTCATATTGAGCTGGATTACGGAATGAAGAAGATGTTAGAGGATAATG
TTGATATGCGAAAAGACTTGACCTTCTTACAAATCAAGAAAGAAAAGGAC
TCGACGGACAAAGGAGAGGTTGAGCAAGAACCACAAAGTTCCTTTCGTAA
AGCATTCAACAGATTTTCACCACAAGATGGTGGTAAACAAACGCCACCGA
AGCGCCCTGACCCGCCTACACGCCCTACATCAGGTAAATTCAAAATCATA
AAATGATTAATGTAATCATCTGCTCTACATCTTTCATGGACTTATTTGAG
GTTTGATTCCAAGAGGTTGGACTCTTTAGAATATTACGCCTACTTTAAGT
TTAGCTTGTTCAATTTCTAAAGATGGAGTTTCTTTTTGCACGTGGTCGTT
GATTTCTAATAACTTTCCCACAATCTCACTTTTCTTATCAGGAGTTTCAA
ACAGTACAAACCTCTCAAAGGATTCTACCACTAAACCTAAAATACCTGAA
CGCCCGAAACCATTTGCTGATACCCGACAGAAAGCTATTCCGCCCCCGCC
ATCAACATCGAAACCATCTTCACGTCCACGAAGTGTCGAACTGGATCTCA
AACCCATCAAGAAAAAAGTAAAGTTTTCTTTCATTTTTATTCACGTTTTT
AAACGCTGTAATTATCTAATAATAGAAGATACTTATTACCCTTTTGAACA
AGTTTGTATTGGCCTTTCCTTTCGAAAAACTCACTGACTGTGCAAATATC
GATAGCACGAATATCTTTGTTAATCTTTTTTGAATTTTATGGACGCTATC
CTTTAGGTACCTGGTAAATTTGAATGTTCATTCTTTATTATCTAATTAAT
TATTTTTTTTTAGAAAAAGAGACGAAAGATGTTCATCCTCTTCTAAACAT
TCGTAAACCTACTGTAACAAATAATTATAAACTGTAAATATATAATTATT
AAATTAGATACCTATAAACCTATAAACTTATAGTAAAATGTAAATAATTA
GAACTGTGAATTTTATAGCTAATTTTTAAATTCTTTTTAAATCTTAATAT
AATAATTTTAAATTGATTCTTAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001131XLOC_001131Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002171-exon-sc0000018-1575043694:875450..875528TCONS_00002171-exon-sc0000018-1575043694:875450..875528Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:869886..870347TCONS_00002171-exon-sc0000018-1575043694:869886..870347Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:869175..869298TCONS_00002171-exon-sc0000018-1575043694:869175..869298Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:868810..868983TCONS_00002171-exon-sc0000018-1575043694:868810..868983Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:868356..868462TCONS_00002171-exon-sc0000018-1575043694:868356..868462Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:867951..868088TCONS_00002171-exon-sc0000018-1575043694:867951..868088Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:867660..867709TCONS_00002171-exon-sc0000018-1575043694:867660..867709Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:866634..867428TCONS_00002171-exon-sc0000018-1575043694:866634..867428Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:865845..866171TCONS_00002171-exon-sc0000018-1575043694:865845..866171Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:865397..865499TCONS_00002171-exon-sc0000018-1575043694:865397..865499Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:864546..865341TCONS_00002171-exon-sc0000018-1575043694:864546..865341Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:864162..864337TCONS_00002171-exon-sc0000018-1575043694:864162..864337Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1575043694:863703..863915TCONS_00002171-exon-sc0000018-1575043694:863703..863915Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:875450..875528TCONS_00002171-exon-sc0000018-1510915933:875450..875528Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:869886..870347TCONS_00002171-exon-sc0000018-1510915933:869886..870347Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:869175..869298TCONS_00002171-exon-sc0000018-1510915933:869175..869298Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:868810..868983TCONS_00002171-exon-sc0000018-1510915933:868810..868983Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:868356..868462TCONS_00002171-exon-sc0000018-1510915933:868356..868462Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:867951..868088TCONS_00002171-exon-sc0000018-1510915933:867951..868088Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:867660..867709TCONS_00002171-exon-sc0000018-1510915933:867660..867709Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:866634..867428TCONS_00002171-exon-sc0000018-1510915933:866634..867428Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:865845..866171TCONS_00002171-exon-sc0000018-1510915933:865845..866171Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:865397..865499TCONS_00002171-exon-sc0000018-1510915933:865397..865499Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:864546..865341TCONS_00002171-exon-sc0000018-1510915933:864546..865341Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:864162..864337TCONS_00002171-exon-sc0000018-1510915933:864162..864337Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1510915933:863703..863915TCONS_00002171-exon-sc0000018-1510915933:863703..863915Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:875450..875528TCONS_00002171-exon-sc0000018-1491911889:875450..875528Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:869886..870347TCONS_00002171-exon-sc0000018-1491911889:869886..870347Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:869175..869298TCONS_00002171-exon-sc0000018-1491911889:869175..869298Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:868810..868983TCONS_00002171-exon-sc0000018-1491911889:868810..868983Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:868356..868462TCONS_00002171-exon-sc0000018-1491911889:868356..868462Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:867951..868088TCONS_00002171-exon-sc0000018-1491911889:867951..868088Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:867660..867709TCONS_00002171-exon-sc0000018-1491911889:867660..867709Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:866634..867428TCONS_00002171-exon-sc0000018-1491911889:866634..867428Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:865845..866171TCONS_00002171-exon-sc0000018-1491911889:865845..866171Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:865397..865499TCONS_00002171-exon-sc0000018-1491911889:865397..865499Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:864546..865341TCONS_00002171-exon-sc0000018-1491911889:864546..865341Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:864162..864337TCONS_00002171-exon-sc0000018-1491911889:864162..864337Clytia hemisphaericaexon
TCONS_00002171-exon-sc0000018-1491911889:863703..863915TCONS_00002171-exon-sc0000018-1491911889:863703..863915Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:863703..875528 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.489139	0.648682	3.66887e-05	0	0.00014272	0	0.00352563	2.35176e-06	0	4.06844e-10	0.423734	0.269333	1.44232e-05	0	0.0241644	0	0.278942	0	0.304718	0	0	0	0.0865622	1.01436	2.27588e-06	0.705726	0.549286	0	0.148399	0.202837
Blast
[Close]
BLAST of TCONS_00002171 vs. Swiss-Prot (Human)
Match: POTB2 (POTE ankyrin domain family member B2 OS=Homo sapiens GN=POTEB2 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.694e-23
Identity = 62/208 (29.81%), Postives = 106/208 (50.96%), Query Frame = 3 
Query:  528 DRRNRNCLHYAAYLGYTEILETLLNRTDAHKIINAKDDSGKTPLFKAAETSSLACVEILLNHGSDVTIQDNDGISVMHVATLADNAMVMKTLWKHKADLNTKDKLGFTPLHLAAGLGLRGPTHFLLRHGAVVDPIDGKGRTPLLAAAADKNVEIIEILLQHGANATIQDDRGRTAKNIFSTLTLDRRFSDIQPTRTTSSHHFPFEMIT 1151
            D++ R  LH A+  G +E+++ LL+R      +N  D+  +T L KA +     CV +LL HG+D  IQD  G + +H A   ++ ++ K L  + AD+ +K+K G TPL L      +    FL++  A ++ +D  GRT L+ A    +  I+ +LL+   + + QD  G+TA          R ++       +S HH   E+++
Sbjct:  133 DKQKRTALHLASANGNSEVVQLLLDRRCQ---LNVLDNKKRTALIKAVQCQEDECVLMLLEHGADGNIQDEYGNTALHYAIYNEDKLMAKALLLYGADIESKNKCGLTPLLLGVHEQKQEVVKFLIKKKANLNALDRYGRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTA----------REYA------VSSHHHVICELLS 321
The following BLAST results are available for this feature:
BLAST of TCONS_00002171 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
POTB25.694e-2329.81POTE ankyrin domain family member B2 OS=Homo sapie... [more]
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