TCONS_00002170 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002170
Unique NameTCONS_00002170
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3384

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002170 ID=TCONS_00002170|Name=TCONS_00002170|organism=Clytia hemisphaerica|type=transcript|length=3384bp
AGCAGAAAGCAAAAAAAagctGAAAGCCAAGGCACCAGGTCAAAGCACAT
TTATTTTGTTTCAGATGAGTTTGAACTTGgTTTGATGACATCGGCATGGT
AAAGAGGAATCTATCTGAAAGAAGTGATGGGTCTACCAAACTAAGCAAGA
AAGATAGCATCAGGAGTACAGGCAGTAGCACTAAAGGACCCAGAAGAAAG
GAGAGCTTCAAATCCAGCAAAAAAGATGGTTTTCGATCCCCAGAGAAAGA
GAAGAgaacaagcaaaaagaaaagCACTGTTTCATTCAATGTATCTCCAA
GggtggaaaaaataccaaaCCCTAAGAAACGTTCAGTAGCTAATCTCAAT
CAACAAGAAAACAATGAAGAAACTCCTGAATTGTCTCATAATGACTCTCG
AACCAGCTACATCCCTTTTGAAGAAGAGAATTCATTGCCAGAATTGTCCC
AAGCCGTCATTCAgaagaaaatggggaaaatgaTACATTTACTTGATACA
AGACCGATGAATTATGTGTGTGTTACTGATCGGAGGAACAGAAACTGTCT
CCATTATGCAGCCTATCTTGGTTATACAGAAATACTTGAAACACTTTTAA
ATCGTACAGATGCTCATAAGATTATCAACGCAAAAGATGACTCTGGAAAA
ACTCCACTTTTCAAGGCAGCAGAAACAAGTTCTTTGGCATGCGTAGAAAT
TCTCCTTAATCATGGTTCTGATGTCACCATACAAGATAATGATGGTATAT
CGGTCATGCATGTTGCCACTCTTGCTGATAACGCGATGGTGATGAAAACA
TTGTGGAAACACAAAGCTGACCTCAATACTAAAGACAAGCTTGGCTTTAC
ACCGCTCCACTTGGCAGCAGGGCTTGGCTTGAGAGGTCCCACACATTTTC
TCTTGAGGCACGGTGCTGTGGTGGATCCCATCGATGGGAAAGGAAGAACA
CCCTTGTTAGCAGCAGCTGCAGATAAGAACGTGGAAATAATTGAGATACT
TTTGCAACATGGTGCGAATGCTACCATACAAGATGATAGAGGAAGGACAG
CAAAGAATATCTTCTCTACTCTAACTTTAGATAGgagattTTCAGATATT
CAACCGACGCGAACTACTTCATCACACCATTTTCCATTTGAAATGATAAC
AGGACGTACCAATAGTTTTATAAACGATATCAAGAAAGTCCACGATCAGG
GTGCTGTTGACGATGCATCAAGACGTGGTAGTACAACCATAACACCAAGA
GGGTCAGCTGCCAATACACCTAAATTTGATGAAATGATGAAAGGACCACA
ATTCAGTTTTGATGAAAAGGATATAGAACAACATCAAGAGCAATCGAAGC
CGATTGAAAAAGTCAAAGACGAATCGTCATACAAGAACCTGATATCACCA
ATCAATTGGAAAAACATATTAGAATCTCCAAGAAGGTTAAAGAAATCTTT
TTCACGTAGCGATTCTAATAAATACACACAGAAATCTCCTACTAAAGCTG
GATCCACAAAAAGATCTTCGTTAAAAAGATCGAAGGCAGTAGTCGATGAA
GATCTAATTATTCCGCAGCTAGAATTTGATCTGGCTCAAATGGATGCTGA
AGACAACCTCAGTGATCGGTCTCGTACAAGCTCAAGACAAGGTTCATTCA
GAAGCCGAACAGATTCCATCAACAGTGTTCGACAACAAGCCAAATCGTAC
CAAGCTGCACCTTCACCGAGAATGGGTTCTGCAATGTCTCAACGAAGCTT
CTCAGATCCTAATCTGGATCGGATTGCTGAGGAGGAATATCATGAGAGCA
ATAGGCCATCTTCTCGTTTGAGTCAACGATCTCAACCAGATGATATCGAA
AGAGAATTTCTTACTAATCAACAACTACAAAACTCCTACACAGAACCTTC
TTACAACAACCCTCCTCTTCAACCTTCAGCCAGTTCCCTTCAAGACAACA
ACCTTCCTATTCAAGACAAAACTCTCAACAAGCAGATTACTCTCATTCTC
AAAATTCCAAACATAGAAACTCCACATTCAAGAGGAATGTCTCTATTGAA
GAGCCTATATCCAGAACATCAGACCAAGGCAGAACACATACAATGGATCA
AACATCAACGAAATCAAACGTCACACCAGCTTTTGAAGAAGACCGATACT
TGTATATGTGTCTGAAAAATCGTGAATTGCTTCTGAAGAAAATTAAACAG
TGTGAAGATTTGGAATCTGAAATCAAGAATGGACAAACAGATGAACACAA
TAATGCGTCTTCGGAACATCTGAAAGAGACATCGCTGATTGACGAGAACA
GTGCTTTACGAGACGAGCTTCGAGAATTGAAGAAAGAAAACCTCACTCTT
AACGAACACATTCTTTTCAATAAGCGGAAGAAACCGTCCAGAAGTCGTGG
GAACAGTCGGTCAAGATCTAGAAGTCAAAGTCGTAGTAGATCGCGATCGA
GAAGTAAGAGCCGGGAACGATTGGATCAGAGTCgcaagaatcttcccgat
ccaAACCGATCGCAACAAACACCCGACAGTGAGTATGAAGACCTCGAACG
TGAAAATTCAACGAGTGACGGTGAAGTGAAACCGCCCGAGCGTTCTCGGC
GCCGAGGACAAGACTCGAGGAATACCGAATACAGTGACGAGGGATTCTCG
CCTCACGAATCTGAAGACGAAAGCGAGTACAGTTATTCGGAAGGCGATTC
GTATTTCCAAGAGACAATCAACAAACTTCTTAAGGAGAACATTTTATTAA
AACGATCACACAAAGCATATGAAAGATGTCACAAAGAGTTGGAGGACGAG
GTCGTGGAACATAAAACGACCATCAAGAACCTCGAAGAAAAGTtacaaga
agaagaaaagaagagagaaaaagctgAGAATGATTACGAGGAGTTACAAA
AAGCTCATATTGCGTTAGAACAAGCTCATATTGAGCTGGATTACGGAATG
AAGAAGATGTTAGAGGATAATGTTGATATGCGAAAAGACTTGACCTTCTT
ACAAATCAAGAAAGAAAAGGACTCGACGGACAAAGGAGAGGTTGAGCAAG
AACCACAAAGTTCCTTTCGTAAAGCATTCAACAGATTTTCACCACAAGAT
GGTGGTAAACAAACGCCACCGAAGCGCCCTGACCCGCCTACACGCCCTAC
ATCAGGAGTTTCAAACAGTACAAACCTCTCAAAGGATTCTACCACTAAAC
CTAAAATACCTGAACGCCCGAAACCATTTGCTGATACCCGACAGAAAGCT
ATTCCGCCCCCGCCATCAACATCGAAACCATCTTCACGTCCACGAAGTGT
CGAACTGGATCTCAAACccatcaagaaaaaaGGAAAGAGCGAAGAAAGGA
TTGGAAGagttataaaaaagaaaaccaagTGCTG
Run BLAST on NCBI

transcript from alignment at sc0000018:863552..875528-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002170 ID=TCONS_00002170|Name=TCONS_00002170|organism=Clytia hemisphaerica|type=transcript|length=11977bp|location=Sequence derived from alignment at sc0000018:863552..875528- (Clytia hemisphaerica)
AGCAGAAAGCAAAAAAAAGCTGAAAGCCAAGGCACCAGGTCAAAGCACAT TTATTTTGTTTCAGATGAGTTTGAACTTGGTAAGTTAATGAATTTTCTTG GTCTAGTGTTTCTAGGCACATATGGTAATTGTCGAATTTGGATACAGTTG GTGGTGGGGGGGTCCAACTACATACCGATAAAAAAAACAAGTATTGAGAC AAAAATCCTTTCAGCCAATTTCTTTTTGATTTCGTCCACAAACTCCACTG AAATCATATGATTTCACTTGCTTTCACCTTTGCGGAAAAAACTCTTGTCT AATGCTCACTCCGACATTTTAAATTTTCCGGGGGTTTTGTTGTTTGGAAT TGCTTAGGTCAGGATTGCCAGTAACGGCTTGTCACTGTGCCGGATGGGGA TGCATACATGGCGGCTTGGGCCCCGCAGGGCTGCTATTAACGGCTCGAAT TTCAGTCAGGTTAAAAAAGGGGCAATTTTACTCATATTATAATAACATTA CCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTGAAAAAGGATTATTCCTCTCTGACCACTAAGCAAAGAAAA ACAGTTTCAACCTTTCTATAAATTTCAGCTGATAAAAAGGGTGTCAGAAT TAGAGGAGGTAGGCTTAGAGTTACGGTAGGTTGTCGCGTTCTCCAAAACA ATTATGTCGACATCCCTCTTCTTATTTCCACAACCTTCTTTGGAGATAGG GAATAATAGGAAGGTCGGAATAACTGATAGACAAAAGATTTTTTCTTCTC GCTTACAGTAAGGCAAAGAAAATTAGTTTCAATCACATAGAATGCACCCC CGAGTGTTGTGTAATAGAACTGGGGCATAGCTGATAGGTTGAAAATATTA TATTTAAATTATGTTAAAAATCTATGCCGTGGTGAAGGTTTTATCCCTCT TGAAAAAATTCTTGTCTGCGGCGCAATAAATTTATCCAGGATTTGCATGC AAAGTTTCTTTGATATTTTGCTTTGTGAAGGTGGGGGCTATGTCTCTAGA ATTTAGCCGGGGCCTATTTTCTTATTTTCACATAATATCATTCCCCCCTG AAAAATGCTGGGGGTTGGACCCCTCCTGCACACTATGAATCAGCATTTTC GACCTTCCTATTATTCCTATCTCTAAAGAAGGGTGTCAAAATTTGAAGAG GGATGACGATATTAGACCAACTTACAATACATACAGGGTTATCTTGCTAG CTATAACTTTCATGCTTCATAAACAATAATAGTAATTTGGGTGGGGAGAG AAGGCGACGGTCTTTTAAATATTGAATAACTATATATCGATCAATGAAAT GTCCAACCAAAATAGATTCTGATCAGACATTATGTCCAACCCATATTTTC AGTCCCTTAAAAAATTAAAAAATCAAAAAATTACGTACATTTGAAATTTA TTAGCAACCTTATTATTTACACAGAGAAACTCTCTGCAGTTAAAAATGAT GTCCTCTATTCATTGTGTTTGAAACCAAACAATTCATCCTTTTTTTCAAG CTTGCTTCAAATCAAAACCTAATGTCTTTCTAAATTTCTAGCTGGTCTAA TTTTTTGTCCAACCAAAAAACGATCTCGTCGGACAATCCGACCAATTATT AGCTAAAAATTCATTTAGACATGTCTGACCCGGATCGATTTGCTTTGGAC ATGTGCATGTCCGACCATCAAAAGATTGTTATTTCAGGCCCTGCTATGCA TGATATGCATGATTCAAAAATTTTGGAAGGCATGTTGGAAGATCTGTCTG GCATTCTAACGATTTCAAAAGGAAATGCATCATGTTTATCAAAAAGTTTG GTCTTAAATTGCTTATTTTCAATTTGAATATCAAGATCCAAAAATGAAGC ACTTTTAAAATTTATTACTGTGTCCTTTCTTTGATTCTCAGGTGGATGGG TATCTTTTAGATGTTTTTTAAATTCACTTCTATCATTCATTGCATTCAGG TCATCAATGAATTTGAATGTATTTGAAAATTTTCTTGCAATTGTAAGATT ATTTTTTAAGATCTTTGAGCCAATTACTTTCATAATGATATAAAAACAAG TTGGCCGTCAAGGTAGCCGGATAGGAACCCATGGGAATTTCAATTACCTG TCTAAAAACACAATCACCACAAGAGGAAAAACATTTTCCATTAAAAACTT TATAGGTGATTTAACAGAATGAATATTGAAAGATAATGAATTTTTTGAGG ATTTAGTTACCCATCTAACATCAGGTCTAGCAACAGACAAAAACTNACAA TCACCACAAGAGGAAAAACATTTTCCATTAAAAACTTTATAGGTGATTTA ACAGAATGAATATTGAAAGATAATGAATTTTTTGAGGATTTAGTTACCCA TCTAACACCAGATCTAGCAACAGACAAAAACATGTTAAACAGAAATCGAC AATCTCATTCAAAACTGAGATAAGTTTATCATGAGGTATTTTTGTATAAA GCCTGGAAAAGTCGAAAGTTGAGCATAGCATTGCTTTAGTCATTTGAGAT GATGTTGTCAAAGGAATAAAAGCAATTTTTATGATTTCTTGTACATGTTT TTTTTTTAAGAAACTAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAA TCGGCCCTTTGAGCTTTAAATGTTTCTTATAATATAAAAAATAACATTTT TTAATTCAGCTTTTCTTAAGAACCTTCCAATCCAGTCGCCTCATGGAAAG CTGGATTGGAAGGTTCTTAAGAAAATCTGAATTAAAAAATGTTATTTTTT CATTCTCAGTCTTGGCATGTTTCTTAGATGTTTCTTAGTTTATAGGCATT CTGAGCCTCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAACGTGTAAA TGACCTACTAGTAATAATAATTATTTTTCAGGTTTGATGACATCGGCATG GTAAAGAGGAATCTATCTGAAAGAAGTGATGGGTCTACCAAACTAAGCAA GAAAGATAGCATCAGGAGTACAGGCAGTAGCACTAAAGGACCCAGAAGAA AGGAGAGCTTCAAATCCAGCAAAAAAGATGGTTTTCGATCCCCAGAGAAA GAGAAGAGAACAAGCAAAAAGAAAAGCACTGTTTCATTCAATGTATCTCC AAGGGTGGAAAAAATACCAAACCCTAAGAAACGTTCAGTAGCTAATCTCA ATCAACAAGAAAACAATGAAGAAACTCCTGAATTGTCTCATAATGACTCT CGAACCAGCTACATCCCTTTTGAAGAAGAGAATTCATTGCCAGAATTGTC CCAAGCCGTCATTCAGAAGAAAATGGGGAAAATGATACATTTACTTGATA CAAGACCGATGAATTATGTGTGTGTTACTGATCGGAGGAACAGGTATCAT TTTGAAATTTCTGACATAAAAGTTTGTTTTGTTTCCGAATTACTGTCTCT TTTCATTATCAGTTTTTTTAAATGTTCAACTTTTTGTCCCTCACTAAGGC CTGAGGGGCAAGAACTTAAAACTGTTTTTTACATTTTATTGTTGCCTTTA GTTGAGCTAGAATCTGAGAATGTTTGAGAGTTGTCTGTCTGTGTGTCTGT TCCCAAAAATACTTGGGCAGCCTGGAGACTTCATGGTCTGATTTTTTGGC TTTTTTGAAATGTTTACTGGTCTTNAAATACTTGGGCAGCCTGGAGACTT CATGGTCTGATTTTTTGGCCTTTTTGAAATGTTTACTGGTCTTGATCTTC TAGGGACTGACTGATCTTTATTAAATACAGGATATATATCTTAATTATAA CTTCAATAATGAGTTTTGCTACTATTTTTTTGTTACTACAATCGGGCCTT TGAACAATTTGAAGCTACTGAAGATGAGCCCAGACCGTTGGACATGTTCG ACTATTTAGGTATAATAAATTAAGATTGTTTAAGATTGTAAAGGTTTATT TAATACTGTAAAACTGCTTCTTTTTTGTAGAAACTGTCTCCATTATGCAG CCTATCTTGGTTATACAGAAATACTTGAAACACTTTTAAATCGTACAGAT GCTCATAAGATTATCAACGCAAAAGATGACTCTGGAAAAACTCCACTTTT CAAGGTCAGTTTTTACCAAAATCTTCTGAGCCTTTCTAAATATCCATCTT TATCATCATTGCACTGTTTTGTCGATAAGAATCCAGTCACAATAATATTC GGATTTCTGTCAATTGAATTGTCAAATGTTAACAATTTTGTCCAATTTTT GTACTGTATTTAGTAAATTGTCTACTTTTCGGTAATTGTTTATAGGCAGC AGAAACAAGTTCTTTGGCATGCGTAGAAATTCTCCTTAATCATGGTTCTG ATGTCACCATACAAGATAATGATGGTATATCGGTCATGCATGTTGCCACT CTTGCTGATAACGCGATGGTGATGAAAACATTGTGGAAACACAAAGCTGA CCTCAATACTAAAGACAAGGTTTAACTATGACATTTTACTTTCAAAATCT GCATTAACTACTTTAACTCTAAATTTGATTTAGTATATGGCCAATACTTT CAGGTAAAGGCTATAACCAATTCAAGGTCGAAGTTTTTAGACAGTCTTGA TTAAGCCAAAGTAGTTCTTAGGGGTTTCTGGCTTTTTCATGAAATCCTTG ATGAATTTTCAGAAACACTTTTTCCTAACACTTATTTGAATATGCATGAA ATGTATGTCTGGAAGAACTCGACACCCCACCCCCTGATCCCAGCCAATTA TTTTAAGAGAATTTAATGATAATTTTATGACATACATACACTAACAGTCA TGCAATTTCCATTTAGCTTGGCTTTACACCGCTCCACTTGGCAGCAGGGC TTGGCTTGAGAGGTCCCACACATTTTCTCTTGAGGCACGGTGCTGTGGTG GATCCCATCGATGGGAAAGGAAGGTAATATATTTTTGTCTTGTGCAAAAG TAAGATGTAGGCTTTTCTGTGATTTAAAGTACATATAATTATACTGATTT TTACAATGCGCTAGTTTTCTAGTCAAATTCTGCCCCTCCAAAATCACTTT TTGAGCAAGGCTGTTGATTCTGTTTGCTATAAATGAGTCTTGTTGAACTG GAAGTCACATTAACAATGCTGTTTCCACTTAAGGAGCTGTAAAAACTATC GTGGATCTTAATAAGGTTCATTCTATTCTTGTTTTTTAAGAACACCCTTG TTAGCAGCAGCTGCAGATAAGAACGTGGAAATAATTGAGATACTTTTGCA ACATGGTGCGAATGCTACCATACAAGATGATAGAGGAAGGACAGCAAAGA ATATCTTCTCTACTCTAACTTTAGATAGGTAAGTAACCACAGTACAATGC GTTTTTATAAAAGTTATTTGAATGGCTGGGAGACTACGAATTATGACTGA TATGGTAGTTTTTCAAATTCTGGTATTCTAATTTCTTAATCTAACAATAT CATGTTATTCTATCGTGGCATCACTTTTCGTCTTTTTGATATTGCTTTCA AAACCTAGGCCAGTCAGATATTCGCAACCAAACATAATTCCGATGTAAAT CTACAGTTTTTTTTTCCAGGAGATTTTCAGATATTCAACCGACGCGAACT ACTTCATCACACCATTTTCGTAAGCTTTATTTACTAGAACAGAGATTACT GTTTTTTAAAATGTTATGGGAAATATGAGATGAAACTTTGTTATTTTGAA TTCCTTGCATCCTGAAACCAGCTGCAACTAATGCATTTTATTCCAACTGA AGAAGAGCAGCAGATAGCCAAATACATCGCTCTAATCCAACCAGAATTCA TGTAAATTACTATTGTTTGCTGACAATGCATTTTGTTTGTTTACATACAG CATTTGAAATGATAACAGGACGTACCAATAGTTTTATAAACGATATCAAG AAAGTCCACGATCAGGGTGCTGTTGACGATGCATCAAGACGTGGTAGTAC AACCATAACACCAAGAGGGTCAGCTGCCAATACACCTAAATTTGATGAAA TGATGAAAGGACCACAATTCAGTTTTGATGAAAAGGATATAGAACAACAT CAAGAGCAATCGAAGCCGATTGAAAAAGTCAAAGACGAATCGTCATACAA GAACCTGATATCACCAATCAATTGGAAAAACATATTAGAATCTCCAAGAA GGTTAAAGAAATCTTTTTCACGTAGCGATTCTAATAAATACACACAGAAA TCTCCTACTAAAGCTGGATCCACAAAAAGATCTTCGTTAAAAAGATCGAA GGCAGTAGTCGATGAAGATCTAATTATTCCGCAGCTAGAATTTGATCTGG CTCAAATGGATGCTGAAGACAACCTCAGTGATCGGTCTCGTACAAGCTCA AGACAAGGTTCATTCAGAAGCCGAACAGATTCCATCAACAGTGTTCGACA ACAAGCCAAATCGTACCAAGCTGCACCTTCACCGAGAATGGGTTCTGCAA TGTCTCAACGAAGCTTCTCAGATCCTAATCTGGATCGGATTGCTGAGGAG GAATATCATGAGAGCAATAGGCCATCTTCTCGTTTGAGTCAACGATCTCA ACCAGATGATATCGAAAGAGAATTTCTTACTAATCAACAACTACAAAACT CCTACACAGAACCTTCTTACAACAACCCTCCTCTTCAACCTTCAGGTGAT TTGAACCAAGACGTTCATCTTAACCAACAGTTACAACAGATAAGCCTCTC AGCTTCCCAACTCAGTCAACAACTGCAGATGTCTATCCAATCTCGTCTAT CAGGTTCCTCGGTCCAACCTCAAACTCAACCCCAAATTCTAACTCCGCAA CCCACCTTAGTCACTCATCAGCCCACTGTTGCCACTCCCCAACCAGTGTT AGTCACGCCTCAGCCTACATTAATGACTCCCCAACCTACATTCGTCACCC CACAACCCTCTGTCGTAATTCCACAGCCTCTAGTTACACATCAAGCTGTG CAAGTTACACCTCGTCATATACACATATCCCAACCCTCAATTCCCCAACC TTCAATTCCCCAACCCTACCAATATAACCCNACATATCCCAACCCTCAAT TCCCCAACCTTCAATTCCCCAACCCTACCAACATAACCTAAATCTTTCGT CTTCCAGCCAGTTCCCTTCAAGACAACAACCTTCCTATTCAAGACAAAAC TCTCAACAAGCAGATTACTCTCATTCTCAAAATTCCAAACATAGAAACTC CACATTCAAGAGGAATGTCTCTATTGAAGAGCCTATATCCAGAACATCAG ACCAAGGCAGAACACATACAATGGATCAAACATCAACGAAATCAAACGTC ACACCAGCTTTTGAAGAAGACCGATACTTGTATATGTGTCTGAAAAATCG TGAATTGCTTCTGAAGAAAATTAAACAGTGTGAAGATTTGGAATCTGAAA TCAAGAATGGACAAACAGATGAACACAATAATGCGTATGTTTCTTAAATT TTATGTTTGGAAAATTGTTTCCGCCAATTTTCCCAATGGGCCTAAACGCC TTTTGGACGCCTAATGTACGTTTCTAGGACGTCCAAAGGTCTTAAAGCCG TCCATTGAATGTCCATAAGACGTTGTGTGCCCATAGTGCTAGAACAATGA AATTAATATTTTACAACTTCTCCTGAGGTTTCTTTGTAACAGAGATCTTT CTTGAGGCATGAAAAGATTCCAATATAGCTATGTTCTGTTGGGATCTCAA TCCCAATTCTTTTCTCGAAGTGTTTTTACAAACGAAGTAAGTACAATATG ACAATTCTTTCAATATCGTCCGTCTTTAGGTCTTCGGAACATCTGAAAGA GACATCGCTGATTGACGAGAACAGTGCTTTACGAGACGAGCTTCGAGAAT TGAAGAAAGAAAACCTCACTCTTAACGAACACATTCTTTTCGATAAGCGG AAGAAACCGNAAAGAAAACCTCACTCTTAACGAACACATTCTTTTCAATA AGCGGAAGAAACCGTCCAGAAGTCGTGGGAACAGTCGGTCAAGATCTAGA AGTCAAAGTCGTAGTAGATCGCGATCGAGAAGTAAGAGCCGGGAACGATT GGATCAGAGTCGCAAGAATCTTCCCGATCCAAACCGATCGCAACAAACAC CCGACAGTGAGTATGAAGACCTCGAACGTGAAAATTCAACGAGTGACGGT GAAGTGAAACCGCCCGAGCGTTCTCGGCGCCGAGGACAAGACTCGAGGAA TACCGAATACAGTGACGAGGGATTCTCGCCTCACGAATCTGAAGACGAAA GCGAGTACAGTTATTCGGAAGGCGATTCGTATTTCCAAGAGACAATCAAC AAACTTCTTAAGGAGAACATTTTATTAAAACGATCACACAAAGCATATGA AAGATGTCACAAAGAGTTGGAGGACGAGGTCGTGGAACATAAAACGACCA TCAAGAACCTCGAAGAAAAGTTACAAGAAGAAGAAAAGAAGAGAGAAAAA GCTGAGAATGATTACGAGGAGTTACAAAAAGCTCATATTGCGTTAGAACA AGCTCATATTGAGCTGGATTACGGAATGAAGAAGATGTTAGAGGATAATG TTGATATGCGAAAAGACTTGACCTTCTTACAAATCAAGAAAGAAAAGGAC TCGACGGACAAAGGAGAGGTTGAGCAAGAACCACAAAGTTCCTTTCGTAA AGCATTCAACAGATTTTCACCACAAGATGGTGGTAAACAAACGCCACCGA AGCGCCCTGACCCGCCTACACGCCCTACATCAGGTAAATTCAAAATCATA AAATGATTAATGTAATCATCTGCTCTACATCTTTCATGGACTTATTTGAG GTTTGATTCCAAGAGGTTGGACTCTTTAGAATATTACGCCTACTTTAAGT TTAGCTTGTTCAATTTCTAAAGATGGAGTTTCTTTTTGCACGTGGTCGTT GATTTCTAATAACTTTCCCACAATCTCACTTTTCTTATCAGGAGTTTCAA ACAGTACAAACCTCTCAAAGGATTCTACCACTAAACCTAAAATACCTGAA CGCCCGAAACCATTTGCTGATACCCGACAGAAAGCTATTCCGCCCCCGCC ATCAACATCGAAACCATCTTCACGTCCACGAAGTGTCGAACTGGATCTCA AACCCATCAAGAAAAAAGTAAAGTTTTCTTTCATTTTTATTCACGTTTTT AAACGCTGTAATTATCTAATAATAGAAGATACTTATTACCCTTTTGAACA AGTTTGTATTGGCCTTTCCTTTCGAAAAACTCACTGACTGTGCAAATATC GATAGCACGAATATCTTTGTTAATCTTTTTTGAATTTTATGGACGCTATC CTTTAGGTACCTGGTAAATTTGAATGTTCATTCTTTATTATCTAATTAAT TATTTTTTTTTAGAAAAAGAGACGAAAGATGTTCATCCTCTTCTAAACAT TCGTAAACCTACTGTAACAAATAATTATAAACTGTAAATATATAATTATT AAATTAGATACCTATAAACCTATAAACTTATAGTAAAATGTAAATAATTA GAACTGTGAATTTTATAGCTAATTTTTAAATTCTTTTTAAATCTTAATAT AATAATTTTAAATTGATTCTTAAAAGTGACTAAACGACACTCAAAATCTA AAATTGTTTAATTAGCAATCTTTGAAATGTTGTTGATTACCATTGCTGAT TTGATTGATTTGGTTATCTTATAGGGAAAGAGCGAAGAAAGGATTGGAAG AGTTATAAAAAAGAAAACCAAGTGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001131XLOC_001131Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002170-exon-sc0000018-1575043694:875450..875528TCONS_00002170-exon-sc0000018-1575043694:875450..875528Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:869886..870347TCONS_00002170-exon-sc0000018-1575043694:869886..870347Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:869175..869298TCONS_00002170-exon-sc0000018-1575043694:869175..869298Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:868810..868983TCONS_00002170-exon-sc0000018-1575043694:868810..868983Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:868356..868462TCONS_00002170-exon-sc0000018-1575043694:868356..868462Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:867951..868088TCONS_00002170-exon-sc0000018-1575043694:867951..868088Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:867660..867709TCONS_00002170-exon-sc0000018-1575043694:867660..867709Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:866634..867428TCONS_00002170-exon-sc0000018-1575043694:866634..867428Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:865845..866171TCONS_00002170-exon-sc0000018-1575043694:865845..866171Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:865397..865499TCONS_00002170-exon-sc0000018-1575043694:865397..865499Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:864546..865341TCONS_00002170-exon-sc0000018-1575043694:864546..865341Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:864162..864337TCONS_00002170-exon-sc0000018-1575043694:864162..864337Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1575043694:863552..863604TCONS_00002170-exon-sc0000018-1575043694:863552..863604Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:875450..875528TCONS_00002170-exon-sc0000018-1510915933:875450..875528Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:869886..870347TCONS_00002170-exon-sc0000018-1510915933:869886..870347Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:869175..869298TCONS_00002170-exon-sc0000018-1510915933:869175..869298Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:868810..868983TCONS_00002170-exon-sc0000018-1510915933:868810..868983Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:868356..868462TCONS_00002170-exon-sc0000018-1510915933:868356..868462Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:867951..868088TCONS_00002170-exon-sc0000018-1510915933:867951..868088Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:867660..867709TCONS_00002170-exon-sc0000018-1510915933:867660..867709Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:866634..867428TCONS_00002170-exon-sc0000018-1510915933:866634..867428Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:865845..866171TCONS_00002170-exon-sc0000018-1510915933:865845..866171Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:865397..865499TCONS_00002170-exon-sc0000018-1510915933:865397..865499Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:864546..865341TCONS_00002170-exon-sc0000018-1510915933:864546..865341Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:864162..864337TCONS_00002170-exon-sc0000018-1510915933:864162..864337Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1510915933:863552..863604TCONS_00002170-exon-sc0000018-1510915933:863552..863604Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:875450..875528TCONS_00002170-exon-sc0000018-1491911889:875450..875528Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:869886..870347TCONS_00002170-exon-sc0000018-1491911889:869886..870347Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:869175..869298TCONS_00002170-exon-sc0000018-1491911889:869175..869298Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:868810..868983TCONS_00002170-exon-sc0000018-1491911889:868810..868983Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:868356..868462TCONS_00002170-exon-sc0000018-1491911889:868356..868462Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:867951..868088TCONS_00002170-exon-sc0000018-1491911889:867951..868088Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:867660..867709TCONS_00002170-exon-sc0000018-1491911889:867660..867709Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:866634..867428TCONS_00002170-exon-sc0000018-1491911889:866634..867428Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:865845..866171TCONS_00002170-exon-sc0000018-1491911889:865845..866171Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:865397..865499TCONS_00002170-exon-sc0000018-1491911889:865397..865499Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:864546..865341TCONS_00002170-exon-sc0000018-1491911889:864546..865341Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:864162..864337TCONS_00002170-exon-sc0000018-1491911889:864162..864337Clytia hemisphaericaexon
TCONS_00002170-exon-sc0000018-1491911889:863552..863604TCONS_00002170-exon-sc0000018-1491911889:863552..863604Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:863552..875528 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.876817 0.800552 0.542542 0.472382 1.98725 1.89377 1.41112 1.58993 0.97711 0.687751 1.50341e-05 0.415117 0.342396 0.718859 0.306857 1.01212 0.412276 1.06731 0.457685 0.581935 0.499515 0.440019 0.903182 0.000101429 1.42513 0.596839 0.0691998 0.133488 0.398814 0.534663
Blast
BLAST of TCONS_00002170 vs. Swiss-Prot (Human)
Match: POTB2 (POTE ankyrin domain family member B2 OS=Homo sapiens GN=POTEB2 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.320e-23
Identity = 62/208 (29.81%), Postives = 106/208 (50.96%), Query Frame = 3
Query:  528 DRRNRNCLHYAAYLGYTEILETLLNRTDAHKIINAKDDSGKTPLFKAAETSSLACVEILLNHGSDVTIQDNDGISVMHVATLADNAMVMKTLWKHKADLNTKDKLGFTPLHLAAGLGLRGPTHFLLRHGAVVDPIDGKGRTPLLAAAADKNVEIIEILLQHGANATIQDDRGRTAKNIFSTLTLDRRFSDIQPTRTTSSHHFPFEMIT 1151
            D++ R  LH A+  G +E+++ LL+R      +N  D+  +T L KA +     CV +LL HG+D  IQD  G + +H A   ++ ++ K L  + AD+ +K+K G TPL L      +    FL++  A ++ +D  GRT L+ A    +  I+ +LL+   + + QD  G+TA          R ++       +S HH   E+++
Sbjct:  133 DKQKRTALHLASANGNSEVVQLLLDRRCQ---LNVLDNKKRTALIKAVQCQEDECVLMLLEHGADGNIQDEYGNTALHYAIYNEDKLMAKALLLYGADIESKNKCGLTPLLLGVHEQKQEVVKFLIKKKANLNALDRYGRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTA----------REYA------VSSHHHVICELLS 321          
The following BLAST results are available for this feature:
BLAST of TCONS_00002170 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
POTB25.320e-2329.81POTE ankyrin domain family member B2 OS=Homo sapie... [more]
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