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TCONS_00002066 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002066
Unique NameTCONS_00002066
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002066 ID=TCONS_00002066|Name=TCONS_00002066|organism=Clytia hemisphaerica|type=transcript|length=3151bp
CTGAAACATAATGTCATTTTAAATCAGACAAAGACACAAGAAGGTTAACA
AGAAGGTTACAAGAATATCCAACGACCATGGAAGGTCTATTATTGACGCT
GCTTTTGATATGCTCGATTTCATTACCTTCAGAAGCTCAGAGCACTACTC
TTTCGCCTGCAAACACTACCAACTCTCTCAATACAACTACTACTTCTCCT
TTTACGACTACAACAACAGTCACGACCACAACCACTACCCCTCCTCCAAC
CACAACCACGACTCTTCCTCCAACTACAACCACAACCACTACCCCTCCTC
CAACTACAACCACTACCCCTCATCCAACTACAACCACTACCACTCCTCCA
ACTACAACCACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAAG
TACAACCACTACCCATCCTCCAACTACAACCACTACCCCTCCTCCAACTA
CAACCACTACCCCTCCTCCAACTACAACCACTACCACTCCTCCAACAACA
ACCACTACCCCTCCTCCAACTACAACTACTACCCCTCCTCCAACTACAAC
CACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACTA
CTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACT
ACCACTCCTCCAACTACAACTACTACCCCTCATCCAACTACAACTACTAC
CCCTCCTCCAACTGCAACTACGACCACTACCCCTTCTCCAACTACAACTA
CAACTACAACCACTACACCTCCCCCAACTACGACCACAACCACTGCCCTT
CCTCCAACTACAACTACAACCACTACCCCTCCTCCAACTACAACTACAAC
CACTACCCTTCCTCCAACTACAACCACTACACTTCCTCAAACTACAACCA
CTACTCTTCCTCCAACTACAACCACAACCACTACCCCTCCTCCAACTACG
ACCACTTCCCCTCCTCCAACTACGACCACTACAACCATCTCTCCTCCAAC
CACAACCACTTCCCCTCAATCAACTACTATCACTTCTCCTCCAGAAGACT
CGACTCTTACCATTACAACCTCAACGAATACAACAACACCGGAGCCTGTA
ATCTTCGCAAACAAtatcatattcaaatttgttgACGATTACTCGTCTAC
CATCATTAAAGCAGGTGGGAAAGATGCAGCTGAACAGGCCATTTGTGAGA
ATTGTCGAGACGAGTTGAATATACCTGAGAAGGATTTCCATAATTGTTCT
ATCAGTGAAGGCAGTGTCAAAGTGACGTTCATTATGAATCAAACAGCCTT
CTTCGCCAACCACACCGTTCGTAAGTTGAATATGATGGTTAAAGACGATC
TCTTCCAAGTCATGATCGGTGGCTATCGGTTGACAACAAAACCAGGATCG
GTCTTGATAGACAGTGTCATGCAAACAGCATCATCTGATCAGCAAAACAC
ACCATCACCTGTGATATCGGCAAATACCGACACCGACGGAGATGACGACG
ATGATGACGGTTCTTTGATCGCAATCGTTATCTTAATCATTATCATCATC
CTAATCATCATTCTGGTCCTCATTTTATTGTGGATGATCAGAAAACGAAA
AACTATCACCGATGAGAAGCAGCCTGACGAAGAAGCAAGCAGAGGGGCAA
CATCCTTATCAGCAGAGACAAACGACACTTTTGACAACGAATTGAAGAGT
GAAGCAACATTGGGTCGAATCAACTTTGGCTCCAATTTTAACGATGATGA
AGTCCATGTAAATGAACAATGGCAGGGGCTGAGTCAGATACAATATTTGT
ATGGAACCGACAGAGAATGGAAATTCGAAGATGACGAAATATCGACAGTT
GATGTGGACGCGACGAGTCGTATTCGATTCTTGTTTGAAAGTCAGAACTC
CTTACGACATCTTATCGACGAGATGAAAGAGGGTGACGAGGGGCGAACTA
TTTATGATGAAGATGGAACTGAAATGGAAACATACCGTTCAAATGGCGGA
GGGGCGGAAAACCCACCATCCTCGGGCGCAAGTGATGATAAtcaagatga
aaatgaaaataacgaTGACGAAATGGATAATACCAATGAAGAGGATAATG
ATAGTGATGATGATTCTAGTCCTCAAAGTAGTAGCCCTAACAAAGAACCA
CCTGCTCGGCCACCGCCCCCAGGACGCCCGAAGCGCCCTCTTCCACCATC
AAGGGATTCTTCAAATGTGTGATAAGAACTGTTTTAAGATTAATTTTAGT
AAATATTTTGTACATAAAGAGTATTTTTATGAGTAGAgataaaaatatat
gaaaatgaTAATGTAATATTTCTACCTTGTCATGCGTTGGTTGATTTTTA
AGTCCCCCAAAAAAGAATAGATGAAATCGTTGGCCCAATTCGAAAATTTG
GTAGAAAAAGTCTTTTTAGTTGGTACCCTCGAAGAAAATCTCCCCCTCCG
TCTCTTCGAACATTTAGAAATCGGGAATAGGTCACAATACACTTTTTAAC
GATATTTTATCCAAATATTTATGAAAAGTCAAACTTAGAAATATGGTTAA
CGATACTAAAGACTACTCATTCTCAAAATTTGTGTTCGCACAACACGAGA
AGGGAAGAAAGTTATTCTTAATTTTGCTCAAAAAGGCTTTTAATGCAAAG
TCAGAAGTCTTTtacaaatacagttgacgctctttaattcgatcttcaaa
gagaattggattttcatcgaataaggggccttatcgaataaaggagcgtc
gtttatgagagtttcctgttgacggggactttcaatattatcgaataagg
gagcctatcgaatagtagaacgtcgaattagagggCGTCAACAATAAGTT
TTTTTCCTTGATTACACCAAACAGACTATTAAAAATTAACTAGCCACCAT
TATGGAATAAAGTGTTTGAGATACGGACTTCTTACGCAAAACCGAACGTT
TTCTTCTGAAGAAACtttggcgggaatttgatgTTACCGCTTAAAAGCGT
GACTTAAGGCATGAAATAACATAAATTCAGGAAATATGTATTCTCGATCA
TTGAACggttattttataagaatgttccaTTTCCATTTCATCGTGGAAAT
TCTTGAATTCTGGGGggaatcatcctaaaatattcttacggtattagTAT
A
Run BLAST on NCBI

protein sequence of TCONS_00002066-protein

>TCONS_00002066-protein ID=TCONS_00002066-protein|Name=TCONS_00002066-protein|organism=Clytia hemisphaerica|type=polypeptide|length=714bp
MEGLLLTLLLICSISLPSEAQSTTLSPANTTNSLNTTTTSPFTTTTTVTT
TTTTPPPTTTTTLPPTTTTTTTPPPTTTTTPHPTTTTTTPPTTTTTPPPT
TTTTPPPSTTTTHPPTTTTTPPPTTTTTPPPTTTTTTPPTTTTTPPPTTT
TTPPPTTTTTPPPTTTTTPPPTTTTTPPPTTTTTPPPTTTTTTPPTTTTT
PHPTTTTTPPPTATTTTTPSPTTTTTTTTTPPPTTTTTTALPPTTTTTTT
PPPTTTTTTTLPPTTTTTLPQTTTTTLPPTTTTTTTPPPTTTTSPPPTTT
TTTISPPTTTTSPQSTTITSPPEDSTLTITTSTNTTTPEPVIFANNIIFK
FVDDYSSTIIKAGGKDAAEQAICENCRDELNIPEKDFHNCSISEGSVKVT
FIMNQTAFFANHTVRKLNMMVKDDLFQVMIGGYRLTTKPGSVLIDSVMQT
ASSDQQNTPSPVISANTDTDGDDDDDDGSLIAIVILIIIIILIIILVLIL
LWMIRKRKTITDEKQPDEEASRGATSLSAETNDTFDNELKSEATLGRINF
GSNFNDDEVHVNEQWQGLSQIQYLYGTDREWKFEDDEISTVDVDATSRIR
FLFESQNSLRHLIDEMKEGDEGRTIYDEDGTEMETYRSNGGGAENPPSSG
ASDDNQDENENNDDEMDNTNEEDNDSDDDSSPQSSSPNKEPPARPPPPGR
PKRPLPPSRDSSNV
Run BLAST on NCBI

transcript from alignment at sc0000018:757659..761365+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002066 ID=TCONS_00002066|Name=TCONS_00002066|organism=Clytia hemisphaerica|type=transcript|length=3707bp|location=Sequence derived from alignment at sc0000018:757659..761365+ (Clytia hemisphaerica)
CTGAAACATAATGTCATTTTAAATCAGACAAAGACACAAGAAGGTTAACA AGAAGGTTACAAGAATATCCAGTAAGTACTGATTTGAGTTTTATCTTTAC AACTGATTACAGCAATCTCGTGCAAGAAGTGAAAATGATTTGATGATCAA AGAAACTTCTaatgaattatttttgtttCGTTTTAATTTTCAGACGACCA TGGAAGGTCTATTATTGACGCTGCTTTTGATATGCTCGATTTCATTACCT TCAGAAGCTCAGAGCACTACTCTTTCGCCTGCAAACACTACCAACTCTCT CAATACAACTACTACTTCTCCTTTTACGACTACAACAACAGTCACGACCA CAACCACTACCCCTCCTCCAACCACAACCACGACTCTTCCTCCAACTACA ACCACAACCACTACCCCTCCTCCAACTACAACCACTACCCCTCATCCAAC TACAACCACTACCACTCCTCCAACTACAACCACTACCCCTCCTCCAACTA CAACCACTACCCCTCCTCCAAGTACAACCACTACCCATCCTCCAACTACA ACCACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAAC CACTACCACTCCTCCAACAACAACCACTACCCCTCCTCCAACTACAACTA CTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACT ACCCCTCCTCCAACTACAACTACTACCCCTCCTCCAACTACAACCACTAC CCCTCCTCCAACTACAACCACTACCACTCCTCCAACTACAACTACTACCC CTCATCCAACTACAACTACTACCCCTCCTCCAACTGCAACTACGACCACT ACCCCTTCTCCAACTACAACTACAACTACAACCACTACACCTCCCCCAAC TACGACCACAACCACTGCCCTTCCTCCAACTACAACTACAACCACTACCC CTCCTCCAACTACAACTACAACCACTACCCTTCCTCCAACTACAACCACT ACACTTCCTCAAACTACAACCACTACTCTTCCTCCAACTACAACCACAAC CACTACCCCTCCTCCAACTACGACCACTTCCCCTCCTCCAACTACGACCA CTACAACCATCTCTCCTCCAACCACAACCACTTCCCCTCAATCAACTACT ATCACTTCTCCTCCAGAAGACTCGACTCTTACCATTACAACCTCAACGAA TACAACAACACCGGAGCCTGTAATCTTCGCAAACAAtatcatattcaaat ttgttgACGATTACTCGTCTACCATCATTAAAGCAGGTGGGAAAGATGCA GCTGAACAGGCCATTTGTGAGAATTGTCGAGACGAGTTGAATATACCTGA GAAGGATTTCCATAATTGTTCTATCAGTGAAGGCAGTGTCAAAGTGACGT TCATTATGAATCAAACAGCCTTCTTCGCCAACCACACCGTTCGTAAGTTG AATATGATGGTTAAAGACGATCTCTTCCAAGTCATGATCGGTGGCTATCG GTTGACAACAAAACCAGGATCGGTCTTGATAGACAGTGTCATGCAAACAG CATCATCTGATCAGCAAAACACACCATCACCTGTGATATCGGCAAATACC GACACCGACGGAGATGACGACGATGATGACGGTTCTTTGATCGCAATCGT TATCTTAATCATTATCATCATCCTAATCATCATTCTGGTCCTCATTTTAT TGTGGATGATCAGAAAACGAAAAACTATCACCGATGAGAAGGTTTGTAAA TATCTTTTATATATCAAGAACGAGCTGATGTTGAACTGACAATATCAGAA GTGTCTTATCTGATCTCAATATTATCCATTATGTCTTTTTATAACGAATG CTCCATACAAAGCACACACAAAATAAACGGCAAGAGGTATATTCTAGCCT TTTTAATACATAATCAAGGGCATAAATATCTAAATTGAGTATTAAGTAAC AATTAACAAGATCTGTTTCGATTATTTTCAGCAGCCTGACGAAGAAGCAA GCAGAGGGGCAACATCCTTATCAGCAGAGACAAACGACACTTTTGACAAC GGTAAGGGTGATTTATTTCTCAAAGTATAATAGGAAAGATTCTAGATTCT AATCATTTCTGAACAATTGGTTAGCAATAGGAGTGGGGTAGAACGCTTAG CAGTTTTCAAAGAGGCGAAAAGTGATACACGCTCAATTCGATGTAGGTGG CGCACGGATGTTTGCAAATGATCTAATTAATTCCTTTATTTACAGAATTG AAGAGTGAAGCAACATTGGGTCGAATCAACTTTGGCTCCAATTTTAACGA TGATGAAGTCCATGTAAATGAACAATGGCAGGGGCTGAGTCAGATACAAT ATTTGTATGGAACCGACAGAGAATGGAAATTCGAAGATGACGAAATATCG ACAGTTGATGTGGACGCGACGAGTCGTATTCGATTCTTGTTTGAAAGTCA GAACTCCTTACGACATCTTATCGACGAGATGAAAGAGGGTGACGAGGGGC GAACTATTTATGATGAAGATGGAACTGAAATGGAAACATACCGTTCAAAT GGCGGAGGGGCGGAAAACCCACCATCCTCGGGCGCAAGTGATGATAAtca agatgaaaatgaaaataacgaTGACGAAATGGATAATACCAATGAAGAGG ATAATGATAGTGATGATGATTCTAGTCCTCAAAGTAGTAGCCCTAACAAA GAACCACCTGCTCGGCCACCGCCCCCAGGACGCCCGAAGCGCCCTCTTCC ACCATCAAGGGATTCTTCAAATGTGTGATAAGAACTGTTTTAAGATTAAT TTTAGTAAATATTTTGTACATAAAGAGTATTTTTATGAGTAGAgataaaa atatatgaaaatgaTAATGTAATATTTCTACCTTGTCATGCGTTGGTTGA TTTTTAAGTCCCCCAAAAAAGAATAGATGAAATCGTTGGCCCAATTCGAA AATTTGGTAGAAAAAGTCTTTTTAGTTGGTACCCTCGAAGAAAATCTCCC CCTCCGTCTCTTCGAACATTTAGAAATCGGGAATAGGTCACAATACACTT TTTAACGATATTTTATCCAAATATTTATGAAAAGTCAAACTTAGAAATAT GGTTAACGATACTAAAGACTACTCATTCTCAAAATTTGTGTTCGCACAAC ACGAGAAGGGAAGAAAGTTATTCTTAATTTTGCTCAAAAAGGCTTTTAAT GCAAAGTCAGAAGTCTTTtacaaatacagttgacgctctttaattcgatc ttcaaagagaattggattttcatcgaataaggggccttatcgaataaagg agcgtcgtttatgagagtttcctgttgacggggactttcaatattatcga ataagggagcctatcgaatagtagaacgtcgaattagagggCGTCAACAA TAAGTTTTTTTCCTTGATTACACCAAACAGACTATTAAAAATTAACTAGC CACCATTATGGAATAAAGTGTTTGAGATACGGACTTCTTACGCAAAACCG AACGTTTTCTTCTGAAGAAACtttggcgggaatttgatgTTACCGCTTAA AAGCGTGACTTAAGGCATGAAATAACATAAATTCAGGAAATATGTATTCT CGATCATTGAACggttattttataagaatgttccaTTTCCATTTCATCGT GGAAATTCTTGAATTCTGGGGggaatcatcctaaaatattcttacggtat tagTATA

Coding sequence (CDS) from alignment at sc0000018:757659..761365+

>TCONS_00002066 ID=TCONS_00002066|Name=TCONS_00002066|organism=Clytia hemisphaerica|type=CDS|length=6435bp|location=Sequence derived from alignment at sc0000018:757659..761365+ (Clytia hemisphaerica)
ATGGAAGGTCTATTATTGACGCTGCTTTTGATATGCTCGATTTCATTACC
TTCAGAAGCTCAGAGCACTACTCTTTCGCCTGCAAACACTACCAACTCTC
TCAATACAACTACTACTTCTCCTTTTACGACTACAACAACAGTCACGACC
ACAACCACTACCCCTCCTCCAACCACAACCACGACTCTTCCTCCAACTAC
AACCACAACCACTACCCCTCCTCCAACTACAACCACTACCCCTCATCCAA
CTACAACCACTACCACTCCTCCAACTACAACCACTACCCCTCCTCCAACT
ACAACCACTACCCCTCCTCCAAGTACAACCACTACCCATCCTCCAACTAC
AACCACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAA
CCACTACCACTCCTCCAACAACAACCACTACCCCTCCTCCAACTACAACT
ACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCAC
TACCCCTCCTCCAACTACAACTACTACCCCTCCTCCAACTACAACCACTA
CCCCTCCTCCAACTACAACCACTACCACTCCTCCAACTACAACTACTACC
CCTCATCCAACTACAACTACTACCCCTCCTCCAACTGCAACTACGACCAC
TACCCCTTCTCCAACTACAACTACAACTACAACCACTACACCTCCCCCAA
CTACGACCACAACCACTGCCCTTCCTCCAACTACAACTACAACCACTACC
CCTCCTCCAACTACAACTACAACCACTACCCTTCCTCCAACTACAACCAC
TACACTTCCTCAAACTACAACCACTACTCTTCCTCCAACTACAACCACAA
CCACTACCCCTCCTCCAACTACGACCACTTCCCCTCCTCCAACTACGACC
ACTACAACCATCTCTCCTCCAACCACAACCACTTCCCCTCAATCAACTAC
TATCACTTCTCCTCCAGAAGACTCGACTCTTACCATTACAACCTCAACGA
ATACAACAACACCGGAGCCTGTAATCTTCGCAAACAAtatcatattcaaa
tttgttgACGATTACTCGTCTACCATCATTAAAGCAGGTGGGAAAGATGC
AGCTGAACAGGCCATTTGTGAGAATTGTCGAGACGAGTTGAATATACCTG
AGAAGGATTTCCATAATTGTTCTATCAGTGAAGGCAGTGTCAAAGTGACG
TTCATTATGAATCAAACAGCCTTCTTCGCCAACCACACCGTTCGTAAGTT
GAATATGATGGTTAAAGACGATCTCTTCCAAGTCATGATCGGTGGCTATC
GGTTGACAACAAAACCAGGATCGGTCTTGATAGACAGTGTCATGCAAACA
GCATCATCTGATCAGCAAAACACACCATCACCTGTGATATCGGCAAATAC
CGACACCGACGGAGATGACGACGATGATGACGGTTCTTTGATCGCAATCG
TTATCTTAATCATTATCATCATCCTAATCATCATTCTGGTCCTCATTTTA
TTGTGGATGATCAGAAAACGAAAAACTATCACCGATGAGAAGCAGCCTGA
CGAAGAAGCAAGCAGAGGGGCAACATCCTTATCAGCAGAGACAAACGACA
CTTTTGACAACGAATTGAAGAGTGAAGCAACATTGGGTCGAATCAACTTT
GGCTCCAATTTTAACGATGATGAAGTCCATGTAAATGAACAATGGCAGGG
GCTGAGTCAGATACAATATTTGTATGGAACCGACAGAGAATGGAAATTCG
AAGATGACGAAATATCGACAGTTGATGTGGACGCGACGAGTCGTATTCGA
TTCTTGTTTGAAAGTCAGAACTCCTTACGACATCTTATCGACGAGATGAA
AGAGGGTGACGAGGGGCGAACTATTTATGATGAAGATGGAACTGAAATGG
AAACATACCGTTCAAATGGCGGAGGGGCGGAAAACCCACCATCCTCGGGC
GCAAGTGATGATAAtcaagatgaaaatgaaaataacgaTGACGAAATGGA
TAATACCAATGAAGAGGATAATGATAGTGATGATGATTCTAGTCCTCAAA
GTAGTAGCCCTAACAAAGAACCACCTGCTCGGCCACCGCCCCCAGGACGC
CCGAAGCGCCCTCTTCCACCATCAAGGGATTCTTCAAATGTGTGAATGGA
AGGTCTATTATTGACGCTGCTTTTGATATGCTCGATTTCATTACCTTCAG
AAGCTCAGAGCACTACTCTTTCGCCTGCAAACACTACCAACTCTCTCAAT
ACAACTACTACTTCTCCTTTTACGACTACAACAACAGTCACGACCACAAC
CACTACCCCTCCTCCAACCACAACCACGACTCTTCCTCCAACTACAACCA
CAACCACTACCCCTCCTCCAACTACAACCACTACCCCTCATCCAACTACA
ACCACTACCACTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAAC
CACTACCCCTCCTCCAAGTACAACCACTACCCATCCTCCAACTACAACCA
CTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACT
ACCACTCCTCCAACAACAACCACTACCCCTCCTCCAACTACAACTACTAC
CCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACTACCC
CTCCTCCAACTACAACTACTACCCCTCCTCCAACTACAACCACTACCCCT
CCTCCAACTACAACCACTACCACTCCTCCAACTACAACTACTACCCCTCA
TCCAACTACAACTACTACCCCTCCTCCAACTGCAACTACGACCACTACCC
CTTCTCCAACTACAACTACAACTACAACCACTACACCTCCCCCAACTACG
ACCACAACCACTGCCCTTCCTCCAACTACAACTACAACCACTACCCCTCC
TCCAACTACAACTACAACCACTACCCTTCCTCCAACTACAACCACTACAC
TTCCTCAAACTACAACCACTACTCTTCCTCCAACTACAACCACAACCACT
ACCCCTCCTCCAACTACGACCACTTCCCCTCCTCCAACTACGACCACTAC
AACCATCTCTCCTCCAACCACAACCACTTCCCCTCAATCAACTACTATCA
CTTCTCCTCCAGAAGACTCGACTCTTACCATTACAACCTCAACGAATACA
ACAACACCGGAGCCTGTAATCTTCGCAAACAAtatcatattcaaatttgt
tgACGATTACTCGTCTACCATCATTAAAGCAGGTGGGAAAGATGCAGCTG
AACAGGCCATTTGTGAGAATTGTCGAGACGAGTTGAATATACCTGAGAAG
GATTTCCATAATTGTTCTATCAGTGAAGGCAGTGTCAAAGTGACGTTCAT
TATGAATCAAACAGCCTTCTTCGCCAACCACACCGTTCGTAAGTTGAATA
TGATGGTTAAAGACGATCTCTTCCAAGTCATGATCGGTGGCTATCGGTTG
ACAACAAAACCAGGATCGGTCTTGATAGACAGTGTCATGCAAACAGCATC
ATCTGATCAGCAAAACACACCATCACCTGTGATATCGGCAAATACCGACA
CCGACGGAGATGACGACGATGATGACGGTTCTTTGATCGCAATCGTTATC
TTAATCATTATCATCATCCTAATCATCATTCTGGTCCTCATTTTATTGTG
GATGATCAGAAAACGAAAAACTATCACCGATGAGAAGCAGCCTGACGAAG
AAGCAAGCAGAGGGGCAACATCCTTATCAGCAGAGACAAACGACACTTTT
GACAACGAATTGAAGAGTGAAGCAACATTGGGTCGAATCAACTTTGGCTC
CAATTTTAACGATGATGAAGTCCATGTAAATGAACAATGGCAGGGGCTGA
GTCAGATACAATATTTGTATGGAACCGACAGAGAATGGAAATTCGAAGAT
GACGAAATATCGACAGTTGATGTGGACGCGACGAGTCGTATTCGATTCTT
GTTTGAAAGTCAGAACTCCTTACGACATCTTATCGACGAGATGAAAGAGG
GTGACGAGGGGCGAACTATTTATGATGAAGATGGAACTGAAATGGAAACA
TACCGTTCAAATGGCGGAGGGGCGGAAAACCCACCATCCTCGGGCGCAAG
TGATGATAAtcaagatgaaaatgaaaataacgaTGACGAAATGGATAATA
CCAATGAAGAGGATAATGATAGTGATGATGATTCTAGTCCTCAAAGTAGT
AGCCCTAACAAAGAACCACCTGCTCGGCCACCGCCCCCAGGACGCCCGAA
GCGCCCTCTTCCACCATCAAGGGATTCTTCAAATGTGTGAATGGAAGGTC
TATTATTGACGCTGCTTTTGATATGCTCGATTTCATTACCTTCAGAAGCT
CAGAGCACTACTCTTTCGCCTGCAAACACTACCAACTCTCTCAATACAAC
TACTACTTCTCCTTTTACGACTACAACAACAGTCACGACCACAACCACTA
CCCCTCCTCCAACCACAACCACGACTCTTCCTCCAACTACAACCACAACC
ACTACCCCTCCTCCAACTACAACCACTACCCCTCATCCAACTACAACCAC
TACCACTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACTA
CCCCTCCTCCAAGTACAACCACTACCCATCCTCCAACTACAACCACTACC
CCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACTACCAC
TCCTCCAACAACAACCACTACCCCTCCTCCAACTACAACTACTACCCCTC
CTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACTACCCCTCCT
CCAACTACAACTACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCC
AACTACAACCACTACCACTCCTCCAACTACAACTACTACCCCTCATCCAA
CTACAACTACTACCCCTCCTCCAACTGCAACTACGACCACTACCCCTTCT
CCAACTACAACTACAACTACAACCACTACACCTCCCCCAACTACGACCAC
AACCACTGCCCTTCCTCCAACTACAACTACAACCACTACCCCTCCTCCAA
CTACAACTACAACCACTACCCTTCCTCCAACTACAACCACTACACTTCCT
CAAACTACAACCACTACTCTTCCTCCAACTACAACCACAACCACTACCCC
TCCTCCAACTACGACCACTTCCCCTCCTCCAACTACGACCACTACAACCA
TCTCTCCTCCAACCACAACCACTTCCCCTCAATCAACTACTATCACTTCT
CCTCCAGAAGACTCGACTCTTACCATTACAACCTCAACGAATACAACAAC
ACCGGAGCCTGTAATCTTCGCAAACAAtatcatattcaaatttgttgACG
ATTACTCGTCTACCATCATTAAAGCAGGTGGGAAAGATGCAGCTGAACAG
GCCATTTGTGAGAATTGTCGAGACGAGTTGAATATACCTGAGAAGGATTT
CCATAATTGTTCTATCAGTGAAGGCAGTGTCAAAGTGACGTTCATTATGA
ATCAAACAGCCTTCTTCGCCAACCACACCGTTCGTAAGTTGAATATGATG
GTTAAAGACGATCTCTTCCAAGTCATGATCGGTGGCTATCGGTTGACAAC
AAAACCAGGATCGGTCTTGATAGACAGTGTCATGCAAACAGCATCATCTG
ATCAGCAAAACACACCATCACCTGTGATATCGGCAAATACCGACACCGAC
GGAGATGACGACGATGATGACGGTTCTTTGATCGCAATCGTTATCTTAAT
CATTATCATCATCCTAATCATCATTCTGGTCCTCATTTTATTGTGGATGA
TCAGAAAACGAAAAACTATCACCGATGAGAAGCAGCCTGACGAAGAAGCA
AGCAGAGGGGCAACATCCTTATCAGCAGAGACAAACGACACTTTTGACAA
CGAATTGAAGAGTGAAGCAACATTGGGTCGAATCAACTTTGGCTCCAATT
TTAACGATGATGAAGTCCATGTAAATGAACAATGGCAGGGGCTGAGTCAG
ATACAATATTTGTATGGAACCGACAGAGAATGGAAATTCGAAGATGACGA
AATATCGACAGTTGATGTGGACGCGACGAGTCGTATTCGATTCTTGTTTG
AAAGTCAGAACTCCTTACGACATCTTATCGACGAGATGAAAGAGGGTGAC
GAGGGGCGAACTATTTATGATGAAGATGGAACTGAAATGGAAACATACCG
TTCAAATGGCGGAGGGGCGGAAAACCCACCATCCTCGGGCGCAAGTGATG
ATAAtcaagatgaaaatgaaaataacgaTGACGAAATGGATAATACCAAT
GAAGAGGATAATGATAGTGATGATGATTCTAGTCCTCAAAGTAGTAGCCC
TAACAAAGAACCACCTGCTCGGCCACCGCCCCCAGGACGCCCGAAGCGCC
CTCTTCCACCATCAAGGGATTCTTCAAATGTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001086XLOC_001086Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002066-proteinTCONS_00002066-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002066-exon-sc0000018-1491911889:757659..757729TCONS_00002066-exon-sc0000018-1491911889:757659..757729Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1510915933:757659..757729TCONS_00002066-exon-sc0000018-1510915933:757659..757729Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1575043694:757659..757729TCONS_00002066-exon-sc0000018-1575043694:757659..757729Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1491911889:757852..759399TCONS_00002066-exon-sc0000018-1491911889:757852..759399Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1510915933:757852..759399TCONS_00002066-exon-sc0000018-1510915933:757852..759399Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1575043694:757852..759399TCONS_00002066-exon-sc0000018-1575043694:757852..759399Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1491911889:759640..759709TCONS_00002066-exon-sc0000018-1491911889:759640..759709Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1510915933:759640..759709TCONS_00002066-exon-sc0000018-1510915933:759640..759709Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1575043694:759640..759709TCONS_00002066-exon-sc0000018-1575043694:759640..759709Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1491911889:759904..761365TCONS_00002066-exon-sc0000018-1491911889:759904..761365Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1510915933:759904..761365TCONS_00002066-exon-sc0000018-1510915933:759904..761365Clytia hemisphaericaexon
TCONS_00002066-exon-sc0000018-1575043694:759904..761365TCONS_00002066-exon-sc0000018-1575043694:759904..761365Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:757659..761365 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0.00323187 0 0.0755433 0 0 1.1976 1.43229 0 0.0441055 0.181112 0.0665804 4.96461 4.63787 0.418018 0.235854 0.19843 0.264279 0.710451 1.89797 0 0 0 0.0279151
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002066 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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