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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002025 ID=TCONS_00002025|Name=TCONS_00002025|organism=Clytia hemisphaerica|type=transcript|length=1293bp
ATCAACGATTTGTTGTGTTTGTTTTAATTCTGCCATGTCTGCTTCGTTAT
GTGGTTGAGCGTTCGGATATGCGTCTTCCCAAATGGTTGGTATCCAATTG
TTGTCGAGTGATATCTTGACGGTTTCCCACTGATAATTCATCCAACTTTT
TCCGTGGAGGGGGAAGTGAATACATTTTCACCTTGATAGGGGGACTAATG
CAAATGGGGGATTTCAGGAAATCTTATGGGAAGTAGGGGTAGAAGGTGCA
AAGATTAGGTATAATATTACAAATAGATGATCAGAGGTCATCGAGAAACC
AAGCAAAAACTGTTCCGCTCATTTTGTAGGCCCATCTAATTAGCATCAAC
GTCCAAAGTTTCATACTCAATCATGATTCCTGCTTTCTGGATCTTTGCTG
GGGTAGAGCGCTTAAATCTTTATTTCCACTATTCTGGTGGGTCACCATAt
tgacaaattttcaaaaaattgtcatttttctctaaataggactaagaaaa
tcaaaaataccccaaaaactTTATCCCAACGCTGTTGGTTGActtaaagt
gaaaaaaagttcTGGGTTCTATTTTCGGTATTTGCAAAGAATGCTGACGT
CATAAGGttgcgatgacgtcatcattgataccaaaatttACATCAAAGAT
GTCGACTCATATTTGGTGCATACTTACAAAGCTTCAAATCAATTaaacaa
atatttcaaacgttATCAAAAATGTTCGTTTCGGCCGAAGGTTTAACTGT
GTGATTAACGAGAAATGATTTTTACAGCTAGTTTTTGCTTATAGAAAACT
AGTTTGACTCTTTCTGATTGCatttaaatcatttttaagccatcaaaaat
aatttcggCTTGGTTTTAATCCTTGACGTCCCACCAGCGAAATTTTGTTC
TTTCACGAGCTATATTTTCGACTGCCGATAGTCTTGATTGATGACCTAAC
TCAAAAATTTGGCACGATTCAAAGTTTAAGCATTGAGAAATCTTAAAAGC
gcgattttttagctttttgagaACGTCAAGGACTTCAAAAGATTGCTTCT
ATGTTGAATCGAATTCcatcaaaatatgaaaacttAGGCATCAAGTTTTG
ACATTGACGAATAACTATTAATGACTTAAGGCGCGAATAAAGACACAACA
ACTAATCATGTTAAACTTAATTCACTTATACATAGTATTCATCCCAAGAG
GGATGGTGGTGTTGGTATCTTCCACCCTGTCCTTGGCCACCATGACCACC
ACTATGACCGCCTCTATTACCACTACGATTACCACCACGGTGA Run BLAST on NCBI transcript from alignment at sc0000012:963073..964365 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002025 ID=TCONS_00002025|Name=TCONS_00002025|organism=Clytia hemisphaerica|type=transcript|length=1293bp|location=Sequence derived from alignment at sc0000012:963073..964365 (Clytia hemisphaerica)
TCACCGTGGTGGTAATCGTAGTGGTAATAGAGGCGGTCATAGTGGTGGTC
ATGGTGGCCAAGGACAGGGTGGAAGATACCAACACCACCATCCCTCTTGG
GATGAATACTATGTATAAGTGAATTAAGTTTAACATGATTAGTTGTTGTG
TCTTTATTCGCGCCTTAAGTCATTAATAGTTATTCGTCAATGTCAAAACT
TGATGCCTaagttttcatattttgatgGAATTCGATTCAACATAGAAGCA
ATCTTTTGAAGTCCTTGACGTtctcaaaaagctaaaaaatcgcGCTTTTA
AGATTTCTCAATGCTTAAACTTTGAATCGTGCCAAATTTTTGAGTTAGGT
CATCAATCAAGACTATCGGCAGTCGAAAATATAGCTCGTGAAAGAACAAA
ATTTCGCTGGTGGGACGTCAAGGATTAAAACCAAGccgaaattatttttg
atggcttaaaaatgatttaaatGCAATCAGAAAGAGTCAAACTAGTTTTC
TATAAGCAAAAACTAGCTGTAAAAATCATTTCTCGTTAATCACACAGTTA
AACCTTCGGCCGAAACGAACATTTTTGATaacgtttgaaatatttgtttA
ATTGATTTGAAGCTTTGTAAGTATGCACCAAATATGAGTCGACATCTTTG
ATGTaaattttggtatcaatgatgacgtcatcgcaaCCTTATGACGTCAG
CATTCTTTGCAAATACCGAAAATAGAACCCAgaactttttttcactttaa
gTCAACCAACAGCGTTGGGATAAagtttttggggtatttttgattttctt
agtcctatttagagaaaaatgacaattttttgaaaatttgtcaaTATGGT
GACCCACCAGAATAGTGGAAATAAAGATTTAAGCGCTCTACCCCAGCAAA
GATCCAGAAAGCAGGAATCATGATTGAGTATGAAACTTTGGACGTTGATG
CTAATTAGATGGGCCTACAAAATGAGCGGAACAGTTTTTGCTTGGTTTCT
CGATGACCTCTGATCATCTATTTGTAATATTATACCTAATCTTTGCACCT
TCTACCCCTACTTCCCATAAGATTTCCTGAAATCCCCCATTTGCATTAGT
CCCCCTATCAAGGTGAAAATGTATTCACTTCCCCCTCCACGGAAAAAGTT
GGATGAATTATCAGTGGGAAACCGTCAAGATATCACTCGACAACAATTGG
ATACCAACCATTTGGGAAGACGCATATCCGAACGCTCAACCACATAACGA
AGCAGACATGGCAGAATTAAAACAAACACAACAAATCGTTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002025-exon-sc0000012-1491911889:963073..964365 | TCONS_00002025-exon-sc0000012-1491911889:963073..964365 | Clytia hemisphaerica | exon |
| TCONS_00002025-exon-sc0000012-1510915933:963073..964365 | TCONS_00002025-exon-sc0000012-1510915933:963073..964365 | Clytia hemisphaerica | exon |
| TCONS_00002025-exon-sc0000012-1575043694:963073..964365 | TCONS_00002025-exon-sc0000012-1575043694:963073..964365 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:963073..964365 . |
Blast
The following BLAST results are available for this feature:
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