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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002019 ID=TCONS_00002019|Name=TCONS_00002019|organism=Clytia hemisphaerica|type=transcript|length=1584bp
GTTTATTACGGATACCGGTTGTCAGCGACGTCTACAATTCAGTGTTTTTC
TTCATCGCTGCTACATTGAGCTTTTTCATCCCTTGTATATTAGTACTTGT
CTCCTATGGTTTTATTCTGGTATCAGCGTTAAAGAATatgaaaatggaaa
agaaaatcaGCAAAGTTATTGTCGTTATATCCACAATGGATCAAGAGAAT
CTGGAAAAAGTTGCATCAATGAGACCAGCAAGGTTTCGAGAAATCAAGAT
CGCTTTTAACGTGGCAATAATGACAGTTCCTTTTGTTTGCGGATGGGGTT
ATTTCATGACGTGTAATACTTATGAAATTGTAGCTGGCAAGGATATTACC
GGTTTTCAAAATTGGTTAATCCCTTTCGTACCGTTCGTAATTTCATGTTT
AAATCCATTGACTTATTTAATGTTCACTCGATCTCTGAGGAAGAGTTCGC
TGGTATTACTGTCCAGatcaaaattatgtaaaaaactAACACAGTCGCTC
ATCAAACGGGAAGGCGACTTAACAAGTATGTCGTTCGTGATTAACGATCG
GAACAGTCTAGTTGTAGGTGAACCGGCTTCTCAAAGACAATCAGCTAACT
TATCAGACCATAATGATAATGAAAAGAAGCCGTCTGAGTCATGTGAACAG
GATACTCTGATTGAAAAAGTAGAACTTGGAAAAGGTGTTAAAGTATGATG
AGTGAATAGCACTGATCATTATAAATACTGGTTACCGATTAACAAAATAT
TTGGAATTTAGAAATTTGGTAGCCTACCGGTGTAGTACTAATATAATGTA
AGTACTGCTTTTCTTAATGGGATACTGTTataaaaacacccccttctcac
agacccggtaggattttttccgccagtggggatgaaaatagcGGACTAAA
ACTCAGTGGGGATTGgtattctcatattttttatgaatgaggatttcaat
tctttagtTTTTAAGTTAATAAAATTCAGTGGAGATGGGAAAGATAATAA
ATATTTCGCAGCGAggtttggtttatttgatttttttcggtGGGGACAAA
AAatagaggataattttccaccggggacaatattttggcgaatttttcca
gtgggaagggttcccagtgggtctgtgagaaggggtgtataaAAGAGTAA
TATCCACCTTAAGAAGTGCTATTATTAGGGTACCAAAGCTCTAaagctcc
gatcaaagatgacaCATATGACATAGGGGTCGATGGTGACCTTGGGATAA
GGTATTTAAAAGCGGAAATTAACACCGTTGTTGATTTCAGTATGCCAATA
AGTGAGGGATTAATTATTAATTTATCCGTTTGCAATGGGAACCATTTTCA
TAATGGGATCAGATTGAATCTCTCGAATGTCGATCAAATTACAGAGGTTT
TTAGTTAAATTTGTAGAGCTTAAGAGATCTTAGGGTCTACAAAATCTAAA
TTAGGTTGCTTTGACTTCTGGGGATATCTTAATATCATATTATTATAAAA
CGCAAGCCAGTATGGCTAATTTATGCTTGAcaatttgtaaataattttaa
aattacaATATTCTTTTTATAATTAAAATCGAAC Run BLAST on NCBI protein sequence of TCONS_00002019-protein >TCONS_00002019-protein ID=TCONS_00002019-protein|Name=TCONS_00002019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
LLRIPVVSDVYNSVFFFIAATLSFFIPCILVLVSYGFILVSALKNMKMEK
KISKVIVVISTMDQENLEKVASMRPARFREIKIAFNVAIMTVPFVCGWGY
FMTCNTYEIVAGKDITGFQNWLIPFVPFVISCLNPLTYLMFTRSLRKSSL
VLLSRSKLCKKLTQSLIKREGDLTSMSFVINDRNSLVVGEPASQRQSANL
SDHNDNEKKPSESCEQDTLIEKVELGKGVKV Run BLAST on NCBI transcript from alignment at sc0000012:841010..842593 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002019 ID=TCONS_00002019|Name=TCONS_00002019|organism=Clytia hemisphaerica|type=transcript|length=1584bp|location=Sequence derived from alignment at sc0000012:841010..842593 (Clytia hemisphaerica)
GTTCGATTTTAATTATAAAAAGAATATtgtaattttaaaattatttacaa
attgTCAAGCATAAATTAGCCATACTGGCTTGCGTTTTATAATAATATGA
TATTAAGATATCCCCAGAAGTCAAAGCAACCTAATTTAGATTTTGTAGAC
CCTAAGATCTCTTAAGCTCTACAAATTTAACTAAAAACCTCTGTAATTTG
ATCGACATTCGAGAGATTCAATCTGATCCCATTATGAAAATGGTTCCCAT
TGCAAACGGATAAATTAATAATTAATCCCTCACTTATTGGCATACTGAAA
TCAACAACGGTGTTAATTTCCGCTTTTAAATACCTTATCCCAAGGTCACC
ATCGACCCCTATGTCATATGtgtcatctttgatcggagcttTAGAGCTTT
GGTACCCTAATAATAGCACTTCTTAAGGTGGATATTACTCTTttatacac
cccttctcacagacccactgggaacccttcccactggaaaaattcgccaa
aatattgtccccggtggaaaattatcctctatTTTTTGTCCCCaccgaaa
aaaatcaaataaaccaaaccTCGCTGCGAAATATTTATTATCTTTCCCAT
CTCCACTGAATTTTATTAACTTAAAAactaaagaattgaaatcctcattc
ataaaaaatatgagaatacCAATCCCCACTGAGTTTTAGTCCgctatttt
catccccactggcggaaaaaatcctaccgggtctgtgagaagggggtgtt
tttatAACAGTATCCCATTAAGAAAAGCAGTACTTACATTATATTAGTAC
TACACCGGTAGGCTACCAAATTTCTAAATTCCAAATATTTTGTTAATCGG
TAACCAGTATTTATAATGATCAGTGCTATTCACTCATCATACTTTAACAC
CTTTTCCAAGTTCTACTTTTTCAATCAGAGTATCCTGTTCACATGACTCA
GACGGCTTCTTTTCATTATCATTATGGTCTGATAAGTTAGCTGATTGTCT
TTGAGAAGCCGGTTCACCTACAACTAGACTGTTCCGATCGTTAATCACGA
ACGACATACTTGTTAAGTCGCCTTCCCGTTTGATGAGCGACTGTGTTagt
tttttacataattttgatCTGGACAGTAATACCAGCGAACTCTTCCTCAG
AGATCGAGTGAACATTAAATAAGTCAATGGATTTAAACATGAAATTACGA
ACGGTACGAAAGGGATTAACCAATTTTGAAAACCGGTAATATCCTTGCCA
GCTACAATTTCATAAGTATTACACGTCATGAAATAACCCCATCCGCAAAC
AAAAGGAACTGTCATTATTGCCACGTTAAAAGCGATCTTGATTTCTCGAA
ACCTTGCTGGTCTCATTGATGCAACTTTTTCCAGATTCTCTTGATCCATT
GTGGATATAACGACAATAACTTTGCtgattttcttttccattttcatATT
CTTTAACGCTGATACCAGAATAAAACCATAGGAGACAAGTACTAATATAC
AAGGGATGAAAAAGCTCAATGTAGCAGCGATGAAGAAAAACACTGAATTG
TAGACGTCGCTGACAACCGGTATCCGTAATAAAC Coding sequence (CDS) from alignment at sc0000012:841010..842593 >TCONS_00002019 ID=TCONS_00002019|Name=TCONS_00002019|organism=Clytia hemisphaerica|type=CDS|length=696bp|location=Sequence derived from alignment at sc0000012:841010..842593 (Clytia hemisphaerica)
TCATACTTTAACACCTTTTCCAAGTTCTACTTTTTCAATCAGAGTATCCT
GTTCACATGACTCAGACGGCTTCTTTTCATTATCATTATGGTCTGATAAG
TTAGCTGATTGTCTTTGAGAAGCCGGTTCACCTACAACTAGACTGTTCCG
ATCGTTAATCACGAACGACATACTTGTTAAGTCGCCTTCCCGTTTGATGA
GCGACTGTGTTagttttttacataattttgatCTGGACAGTAATACCAGC
GAACTCTTCCTCAGAGATCGAGTGAACATTAAATAAGTCAATGGATTTAA
ACATGAAATTACGAACGGTACGAAAGGGATTAACCAATTTTGAAAACCGG
TAATATCCTTGCCAGCTACAATTTCATAAGTATTACACGTCATGAAATAA
CCCCATCCGCAAACAAAAGGAACTGTCATTATTGCCACGTTAAAAGCGAT
CTTGATTTCTCGAAACCTTGCTGGTCTCATTGATGCAACTTTTTCCAGAT
TCTCTTGATCCATTGTGGATATAACGACAATAACTTTGCtgattttcttt
tccattttcatATTCTTTAACGCTGATACCAGAATAAAACCATAGGAGAC
AAGTACTAATATACAAGGGATGAAAAAGCTCAATGTAGCAGCGATGAAGA
AAAACACTGAATTGTAGACGTCGCTGACAACCGGTATCCGTAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002019-exon-sc0000012-1491911889:841010..842593 | TCONS_00002019-exon-sc0000012-1491911889:841010..842593 | Clytia hemisphaerica | exon |
| TCONS_00002019-exon-sc0000012-1510915933:841010..842593 | TCONS_00002019-exon-sc0000012-1510915933:841010..842593 | Clytia hemisphaerica | exon |
| TCONS_00002019-exon-sc0000012-1575043694:841010..842593 | TCONS_00002019-exon-sc0000012-1575043694:841010..842593 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:841010..842593 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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