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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002001 ID=TCONS_00002001|Name=TCONS_00002001|organism=Clytia hemisphaerica|type=transcript|length=1366bp
CTGGAAATAACAGCAAGGtgttaaatttcttattacaaaaagGGTGGAAA
AGGTGAAAACATCATCACATGGCCttctaaaattgtaaaaacttcaTTAC
TTTATAACTTAAACTCAGaaatttttcagccaaagtaTTTAAGATAACAA
GGGCATGTCAATTTTGTCAACTAagagaacatttttttttaaatttcaat
tgagATCATCCCAAAGTATGTTAGCAGACAATTTGAATAGCTGACAGATT
TTGAAAACTGGAGAGGCCAACTGTGTTTCAtccgaggggggggggctact
taggcaaaatgggtgccgagTATGtgtgagccataagggtcccttttcta
caccctcgaaagtctcttaAAGGGGNATAGCTGACAGATTTTGAAAACTG
GAGAGGCCAACTGTGTTTCATCCGAGGGGGGGggctacttaggcaaaatg
ggtgccgagtatgtgcgagccataagggtcccttttttacaccctcaaaa
gtctctcaaaggggtacaaaaaccttttaaaagaaaattgagtctctata
agggtccaaaaatcacgaaaatcaacaattttgaGAAAAGATGACTTACC
GGTCACCTCACAAACCTAGTACTCTGGGTACGTTTAATTAACTAGAGAGT
TACAAGTCTGCTTAAGAAATTCAAGGAACCTTTCAATAAAATTCTGTTAC
AATTTATAAATCTcaatatatatttataaaaaatagaaaaatatcaagCA
GTCTCACAAAGGATGAGAAAAACCATTTCACTGTAGTGCAATTCGACCCC
GATTGTCTAACCAAAGGGCAGGGCGATAATGCAAGTATCATATTCTTGTC
ATTTCACATTTGTATTCATTGTTCAAAAATGGATCTTTAAAGTTAGCATA
TTATCTTTTAATTCATCTCANTCATTTCACTGTAGTGCAATTCGCCCCCG
ATTGTCTAACCAAAGGGCAGGGCGATAATGCAAGTATCATATTCTTGTCA
TTTCACATTTGTATTCATTGTCCATAAATGGATCTTTAAAGTTAACATTA
TTATCTTTTAATTCATCTCAATCTGTTAGTGTTGTACTGTCACAGTTTCC
TAGCAATATTACTGACTTGCGTTGAAAGATTTctgataaaaatttgattt
agttTTATTCAGTTTCAGAAGCTTGTATCATACACACCAATTgttcacac
aaaaatcatgaaatcatAATAACTGATATCCAGCATTTGTGGCCTTGTTG
GCTAAGATTCTTATTGCGTCATACAANTCTTAATAGAGTTGGAAAATACT
TTTAATTTCATTAGAAAATTAATATGATATACAGGTGCTAAAAGCAGTAA
TAAAGCACTACCACAG Run BLAST on NCBI transcript from alignment at sc0000012:447059..448424 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002001 ID=TCONS_00002001|Name=TCONS_00002001|organism=Clytia hemisphaerica|type=transcript|length=1366bp|location=Sequence derived from alignment at sc0000012:447059..448424 (Clytia hemisphaerica)
CTGTGGTAGTGCTTTATTACTGCTTTTAGCACCTGTATATCATATTAATT
TTCTAATGAAATTAAAAGTATTTTCCAACTCTATTAAGANTTGTATGACG
CAATAAGAATCTTAGCCAACAAGGCCACAAATGCTGGATATCAGTTATTa
tgatttcatgatttttgtgtgaacAATTGGTGTGTATGATACAAGCTTCT
GAAACTGAATAAaactaaatcaaatttttatcagAAATCTTTCAACGCAA
GTCAGTAATATTGCTAGGAAACTGTGACAGTACAACACTAACAGATTGAG
ATGAATTAAAAGATAATAATGTTAACTTTAAAGATCCATTTATGGACAAT
GAATACAAATGTGAAATGACAAGAATATGATACTTGCATTATCGCCCTGC
CCTTTGGTTAGACAATCGGGGGCGAATTGCACTACAGTGAAATGANTGAG
ATGAATTAAAAGATAATATGCTAACTTTAAAGATCCATTTTTGAACAATG
AATACAAATGTGAAATGACAAGAATATGATACTTGCATTATCGCCCTGCC
CTTTGGTTAGACAATCGGGGTCGAATTGCACTACAGTGAAATGGTTTTTC
TCATCCTTTGTGAGACTGcttgatatttttctattttttataaatatata
ttgAGATTTATAAATTGTAACAGAATTTTATTGAAAGGTTCCTTGAATTT
CTTAAGCAGACTTGTAACTCTCTAGTTAATTAAACGTACCCAGAGTACTA
GGTTTGTGAGGTGACCGGTAAGTCATCTTTTCtcaaaattgttgattttc
gtgatttttggacccttatagagactcaattttcttttaaaaggtttttg
tacccctttgagagacttttgagggtgtaaaaaagggacccttatggctc
gcacatactcggcacccattttgcctaagtagccCCCCCCCTCGGATGAA
ACACAGTTGGCCTCTCCAGTTTTCAAAATCTGTCAGCTATNCCCCTTtaa
gagactttcgagggtgtagaaaagggacccttatggctcacaCATActcg
gcacccattttgcctaagtagcccccccccctcggaTGAAACACAGTTGG
CCTCTCCAGTTTTCAAAATCTGTCAGCTATTCAAATTGTCTGCTAACATA
CTTTGGGATGATctcaattgaaatttaaaaaaaaatgttctctTAGTTGA
CAAAATTGACATGCCCTTGTTATCTTAAAtactttggctgaaaaatttCT
GAGTTTAAGTTATAAAGTAAtgaagtttttacaattttagaaGGCCATGT
GATGATGTTTTCACCTTTTCCACCctttttgtaataagaaatttaacaCC
TTGCTGTTATTTCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002001-exon-sc0000012-1491911889:447059..448424 | TCONS_00002001-exon-sc0000012-1491911889:447059..448424 | Clytia hemisphaerica | exon |
| TCONS_00002001-exon-sc0000012-1510915933:447059..448424 | TCONS_00002001-exon-sc0000012-1510915933:447059..448424 | Clytia hemisphaerica | exon |
| TCONS_00002001-exon-sc0000012-1575043694:447059..448424 | TCONS_00002001-exon-sc0000012-1575043694:447059..448424 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:447059..448424 . |
Blast
The following BLAST results are available for this feature:
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