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TCONS_00001973 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001973
Unique NameTCONS_00001973
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length873

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001973 ID=TCONS_00001973|Name=TCONS_00001973|organism=Clytia hemisphaerica|type=transcript|length=873bp
AGGAAACCGAGGTGACTATTGCCTACCAGAGGTTTGCACATATATAGCAG
ACTGTATCGGCGATCAACGCGACGACTTTCTTCAGCGATTAGGACTTCAG
GTAAATAATGGCCAAGACACAAAAGAACTTATTAAGAACACACCATGGCC
GGATATCAAAAGAACATTGATAACACTTGGAAAGGCTGATATTGTTGATT
GGATCAAAGGAAATACATTAATAACGCAAGCTTTGTTCGCCGCTTCGATC
ATGCTAAAACAGAACAAAGTCAACGGTCTCATCAACCATCTTGTCGACCA
GCCCTTCTCCTTATCAGAGAGTGATGTCTGCTACATTCCGAGGGAAGAAA
CATATGTCAACCTATCGGTTCTCAAGAGCAGTAAAGTAGAAGAGGAGTTC
ACCAACTCAGACCGTGNTAGCCCTTATTTGTCAAACCGTGAGCTATCCAG
CTGTTTACCGACAATCCTGGGGATCGAACGAATGCGAAAAGATAAAGAGA
ATAGTCTTTTCATTACATTCTTTGATAACTTGACTAGACTTTACACAACA
ACAACGCCCTTTATACAAAGGGCATCGAATTGGTTTCAAAgctttttatt
tcagaaatacATGAAAAAGACTATCATTCCGCAAAGTATGTTTCACAGAA
ATGTTCTTATGATTGACTGCAATCAACCGGTCTGTAAAGACTTTTTNCCC
AATTGAATTCGTCTTTAGTTTTGCATGCAGAGAGCTTAACACTGTCCTTC
ATGGAGTCAAAAGCTCGGAAGATCTTTTCGAAAAGTTTTATCCAGAAATA
TTTAAGCTCATTACAGTTGCCGACTTGAAGGAAATCGCTGACAGAGTTAT
GATTGTCGTCGACGGCGTCGATG
Run BLAST on NCBI

protein sequence of TCONS_00001973-protein

>TCONS_00001973-protein ID=TCONS_00001973-protein|Name=TCONS_00001973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
GNRGDYCLPEVCTYIADCIGDQRDDFLQRLGLQVNNGQDTKELIKNTPWP
DIKRTLITLGKADIVDWIKGNTLITQALFAASIMLKQNKVNGLINHLVDQ
PFSLSESDVCYIPREETYVNLSVLKSSKVEEEFTNSDRXSPYLSNRELSS
CLPTILGIERMRKDKENSLFITFFDNLTRLYTTTTPFIQRASNWFQSFLF
QKYMKKTIIPQSMFHRNVLMIDCNQPVCKDFXPN
Run BLAST on NCBI

transcript from alignment at sc0000012:1063811..1084276-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001973 ID=TCONS_00001973|Name=TCONS_00001973|organism=Clytia hemisphaerica|type=transcript|length=20466bp|location=Sequence derived from alignment at sc0000012:1063811..1084276- (Clytia hemisphaerica)
AGGAAACCGAGGTGACTATTGCCTACCAGAGGTTTGCACATATATAGCAG ACTGTATCGGCGATCAACGCGACGACTTTCTTCAGCGATTAGGACTTCAG GTAAATAATGGCCAAGACACAAAAGAACTTATTAAGAACACACCATGGCC GGATATCAAAAGAACATTGATAACACTTGGAAAGGCTGATATTGTTGATT GGATCAAAGGAAATACATTAATAACGCAAGGTAGGGGTCAGTTTTTAAAT AGCCGTTGTTTATAATTACCGTATTACTTCGAATAAACGCCCCTCTAGGG GAGAGGCGTTTATTAGAAACCTATGACTTTAATACTTCAATACCAGTGCT GATTGGGTTTGAAAAGGAAGATTTTAGTCATTTCTTGTAACCAGAGCAGT TTTCGATGCAATTTTAGTCGTTAAACCAAAGGAATTTTGCACCATTATCC TAATAAAGAACTAAAACAAAGACTAAAATAATTTAATAAACGCCCCCTTC TTTTGAACGCCCCCTCGAATAAACGCCCCTCCTAAAATCGAAAAAATTAA ATAAACGCCCCGGCGGCGTTTATTCGAAGTAATACGGTATTCAAATGTAT TGCTGTTCATTCGAAACGACCCTCGTGGTAAAATAATGAAACATCATCTG GTTTGACCAAGCAGAATTTGGCGCCCTTTTTAGANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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CTTCTCAAAAGGGCTCCGCTGGTTGGGCCTGGCCCACCTGCCCCCCCCCC CTGCCACTGATCGCCTCTCATTTTCGAATAGCTTGTACCAAACTATTATT TGTTGAAAGACAAGTGAACGGTTGTCAAAAAATATTCAGTCGAGCTTGAT GGATATTCGACGAAGCGAAGCTAGTTGAGTCGAATCATAGTCCGTATAAA AAACCCCGGATATTAACTTGTCATTTTCGAACGCTTAGAATTTAAGAAAG TAGAATTAACTTTCGCAAAAGAGGCAAATAAAAGAAAAAGGTTCAGTGGA TCAAACAAATGACAAATTTTAATTAATCCTTTAAGTGCCACGGTCCTATT TTTCTAAGTATTTTAAGAAAATCGCTAGTTCAAACATTAAAGGCTTATAT CTCCGGATCTAGAAGGAATTAGACGCTCGTGTTTGAAGTCGCCCTCATAT ATAGGCCATGTCCAATATACTAGACATTGACACTTAAAGTGTTAATGTTC ATAACTTTTTTCCACCAATTATACTCTTTCTAGATATCAATAAATACACA TACGACAATATAGGTTGTCTGTACACAAACCCAGTATCTACGGCTGATTT CAAAATTCATTACCGTCGAGGGTCTATTATCATTGTCTTTTCTCATTTGA GATTTTTCAAACCGACCTCTGCGATGGGGAGTGTTGGTGAGAGAGGGGAG ACGATGAGAGAAGTGTTGCTCTCTGTAAATCATACTTCATCGCAGAGGTT TTCGAATGGGAATTCTTTTATCAAACAGACAATGCACACAGAGCATGAAG CGATAAACGTGAGATACACTCTGGTACAGAGTATAATACAGGGGGTTCAC CTATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATTTCTTTTTTCCGCCATCCGCCAAATTAAATTTCCGCCAAATTAAACAT TTTGAAAATATGATCTCTTTTTTAAGGTGTTTTTGCTATTTTTTCGCTGT TTTGACGCCATCTTAAGGTTAATTTTTTAAGCGACCGCCAAATTAAATTC CCGCTAAATTTAGTTTTTTCGTCCATCCGCCAAATTAAATTCCCTCTGAA AAAACTTTTTTGGCCATCCGCCAAATTAAATTCCCTCTGAAAAAACTTTT TTGGCCATCCGCCAAATTAAATTCCCGCCAAAATTTCTTCCTTTAAGGTA AGCCCTCATGAGCAAAAAAACATCCATCTCATAACAAAATTGAGTAATTT GACTAAGAACATTGATGTATGCTTATTAATAGTGATTCTTATGGATAAAC ATGCGTTTTTTGCGCCAACAAATTTTTTTTGCGAAAATCTGTTTGAGCCA TCTTTTACCTATGATGGTACCCTACTTTCATGCAAAAAATCAGAAAAAAT TAATGATCCAATTTTTCATCAAGTCCAAAAAACCCGTTTTTTAGCCGTTT TTTGGCCCAAAATTGCCCAAAAAATTTTTTTTTAGAAAATCGGGCTCCGT CACATTTTGGCCACTACCATTTTCCACCTTTGTACCAAAAATCAAAAGAT TCCTATGATTCAATCCTGAGAAAAGTTGGTAACAGACGAACGAACGAACG AACGGACGAACGGACGAACAAACACAGGTTAATTTATAGGACCTCCACCG GGGTAGGTCCAAAAAAATACGTAATTCGCGGGAATGAACTTTTGCCAGTT ACAAATTTGACACATTTTGCGGGAATTGACTATTGCGAATGGCAACCTTC GGCATTTTTTTGTGGAATACAGGGGATAATATACAATATCCGTGATTTGG CCGAAACATCGCGAACTCGCGAAAGTTTCTTCCTTGAAAATAGTGAACTC TAACCCCTCCCATAGCAAATCTATTTTAGATAAAAGCCGTTTTTAATACG CATGCGTAACAGACAAACAGGCTTATTCCATGAACAGTGAAAAAAAAACA TTATGTCGATGATTAGTACAGCATGCTGCTCTCGGGATGGAGCACTCATA TGGTCCGACCCACGGCATGTGCCGTCCTAAAGGGTAGGTTTTTTGAGACC CTCAAATGCATTGTAAGGGTCTACTTTTGATAGAGTGCACTACAAGGGTC TTATGATATGTTGATATACTCTAAGGGTGTGTTGAGGGACTACTGACAGT AAAAAACTGATGATCTTTATAGTTTCGACTCCCACTCATTTTGATTTGTT TTGCAAATTGTGTCGACAGCTCAGGCTCATTTTCTGATGGCTTCAGCAAA ATTAGATATCAAATCAAACTACACGTAAGGGCAAAGACTTATAACCAAAA CAAGACGTCTAAGCGCATAATTATGCAAAATTATCTCATTGTTCGAACAA TAAAAATAAATTTCCTTTGATCCGCACGTTAGTTGCCGNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATGGATTCTTTGCACTTTGGATATTTTGATATATGTAGCTTGGCTGGTAG ACTTGGTAGATTAGAATTATCAACAGCGATGATGAAAAGATTGAGTAGTG CTACTAACACTAACAATATTTGGAATATCTTAAAATTTGGATAATGTATT GTTCACACTGTCACTAGAGACAGAGCTCACAGCAGGCTACAAACTGAAAT TGTGAGGGTTATTGCATTAGTATATATATGAAAATATTTGGTACCCCAAC CGTAAAATTGTGATGTATGCCATTTGTAGAAAGTGGACTAAAATATACAA TTGATTATGCATGGGTCATTGACTAAATAAGCGAACTGCCATCCCATGGA CAGAATCTGAGATTTACAAAAATAATGTACATTCAATTGGCTAAAAATGG AAAGAGTATTGAAAGCTTGGATATTGCTTTTAAACAGTTTGCCAGATTTT TAATTTGGCAAGACTGGTTTCTGGCAAATTAAAAAACTATTGCTTACAGT AGATGATCTTGAACAAATTTATATAGATGAATTCTTTGGCCAGGTAATTT TAACAAATTATAGATAGCAAACAGAAGCAAACTATATTCTAAATTAATCA GTCAGTCATCATAATGAAATTAATTTTGAGAGGTAATTCTGGAGGTAGTT CTTAATATTGTGAAATGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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CAACTTAATTGAATGTCAAGAGTATGAATTCAATAAGATTGGGTTAATCA TTCCACCATTTATTAAATCAGCCTTTTTAGAGTTTCATATATCTGCAAGT TTTTCAAACACCAAAGCTAAGTAGAAAAGTGATCAGCCATAATAAATGAT AATCAAAACATTCACAACATATTAGTTCTTTAACTCGTCTGTCTTTTGGT ACTGTAGGCCAGGTCGTCCTCAAAAGTTTAAAAGTGTCCTAAAGTCTTTG AAGCTCATCATTTGATCATCTTTGAGTTCATCTTTCTGGTTAGATGATTT CCAATAGTTGTTGACGATCCACTGTTACTGTTAGATATGAAGGCAGTTAG GCTGTCGGGTTTCCTTTAGCACTTGAGGAGAGGAGCCCAGATCATAAAAC TTCAATTTGTATCTTTCTGTTACGAAGATGATTTGATTGCCAGTAAGACA TTTTCACATTCATTTAGATTAGAACGAAGTCAGAGTTTCTAATTTTCTAA TCAAAGTTATTCAAGTTTTTCTGCTTCAGCCATTTTAGAAAATTTCGACG AAAATTCTGAGAAATTCCCCCCCCCCCCCGGGGGGGGGGGGGATTTTTCA AAATTTTCTCAAAAATGTCTTAAAATTTTTGAAAAAATCCCCCCCCCCCC CGGGGGGGGGGGGGATTTTTTCAAAAATTTTAAGACATTTTTGAGAAAAT TTTGAAAAAATTCCCCCCCCCCCCCCGGATGCTGCTGTTTTTTGAAATAC TAATTCTTTTCGTCACTCGTCGTCGGAAAAAAAGTGTTCTCTTTAAGCCT GCCGTCCACTAGGCTATTTTTAGCTATCGCGAAATGATCATCTATAAATA ACACTGTTTATCGCGAAATAAACCTGTTTATCACGTTATTTTATTTCACG ATAGGGAGTGAAAAAGTTTTCACTAAAGATTTTATCCAATCGCGAAAAAC ACCTGCATTTCTTTTATTTCAATGTTTGCATGAGATCGAATTACATGTGA TCGAAGAAAAAATGAGAGAAAATCATTTTGCGATACAAACATCTTCATCA CATGAGAATATTTTTGACTTTTGGTGTGTGCTCTAGTGTACACGTTTTTT TATTAAACCCAGTTTATAAGAACATTGAAGCTGAAATTTGTCAAAAAATT AAGAACATGCCTCAGTTTGGAAAAAAATGACAAGAAACTACAATTTTTTC CATTTTTCAAGCAGTTTTAACTGAACTTAGGCACGGATTTTCTAAAATTG ATAGTCAAATATTGTCCAAATTTTGCGTGCTCTTTAATTTTCATGATATT GTCGATTTAGAGTAGTCTGAAAAATTAAGAACGCATTTAAGAACGTTTTA GGCTGAAAATTGCTTAACAATAAGCACATCCAGTCTCAGCCAAATTTTAG GTGTTCTAGTTAAAAAAAACGTGTAGTGTGATTGTATTTTGTATCAACAT GCCAAGAGGCAAACTATCTGAAGCCGTCAGGAATTATACATGCTTGTATG ATAAGTCGCATCCCGGCCAAAAAAAAAAAAAAAAACACTCAAGAAGAATT GTTGGAGCAAAATCAGAAAATTTCTTGGAATGGAAGAACGTAAAAATAAC AATCCACAGAATTGTCTGATTTTTATCATCCAATTTCTATTACTTTATGT GGATATTGCAAATTGTTTTACTGTATCTATCCTACTCTTGTGATGGTGTT GGATCTAAATGAATGGTTATTTTAATTTTCCAGATACCGCTGAAAAAGCA GTCATCTTGAAGTTGGAAAGAAATTATATCTATTTCGCAATTATCCTATT TAATAGTGGACATGTAAAATCTAAAAATAACTTGAGACATGAGATAACAT TTCGCGATTACATTTCACGATAACCAAGAATAGTACTAGTGGACGGCTAG ACTGGGAATCCAGTCGTTTATAACGTTTTTGTGGAAAGCGAGAAATTTTT ATGTCGGAATATGGTTAAAATAAACTATATTGATGCTCCTGTCAAGTTTT CTACTTCATATTTTTTACTGAGTTAAGTCGTCTAGCATGCTAGACTAGTG GACGGCAGGCTTTATCATTAAAGGTTTTATTTTTAAATAAGAGTGATATC GTTTGCTTACTCATCAATTTTAATTCGCAAGCTTTTTCACATTGGATTGA CACGGATGTGGAGCAAGATTGGTCAGAAAAAAGAAAAGAAAAACATTTTT TGCTTATATAAGGATAATATAAGTGAGACACTGTCCTGGTATGAAATATG TGTCTGATATGAAACGGGCACACTTATGTAAAAATAAAACCTTTAATCAA CAAAAGGGGAAATAAAAAAAAAGAAATAATTTCGAATTTTGTTGTAATTA GAAACAAGACGACTCGGAAGTCGAAAATTTCGCATAATATTCAAAATGAG AAAAATTGACCATAAAATAACGAGGTCAAGCAGGGGGTATTTGCTGTACA ACGACGTGTTAAACGTGATGCATGAAGAATATTGTACACGAGGTTGTAGA TACCATTTTACTTTTTCATAGAGAACCTAAATGGGTTTGTAGCATTGAGT TTAAAACCCGAAGGGCTAGAGTTCAATCTCTAACCTTTCTCAGGCAAGAA AAAGTGAAGCCTTTAAAAAATGCGCCACATTTTTGACGATAGATTGAATG TAGCAATTCCTTTGTTTACGATTGATATTTTTTTCGAAATTTAGCGTTAA ATTTTAGTTTCAATCCGTCATTTGTGTAAAAACCAGGCGAGCCGCTCAAG GACGCGCAAGTTTGGTAGGATTTGTTGGCTTCAAAACTTACCAATGGGAT TCGATTCTAGCCCTTCGGGGTTATACTTCATTGGTTTGTAGGGGTTCGAA ATACCGTTTTCCCGTCAAAATTTTGGCTGAATCCCGGAATCCCGAAAATG GAAAAAAATGATAACACCGTCACACCAGTTTGTAGAGGTTAAAATACCGG CATAATGGCAAAAAAATAGGCTAAATATCGTCATCGTCTGATTTTAAAAT ACCGTTTTCCCGTCTTTTTTTCGTCAAATCCCGTAACACCGTACTTAAAA AGGGCCAATCCCGTCAGTGTGACAAACCCCCCCCCCTAAATCCTTTCCAT AAATTATCATCAAGATTCTTTTTTATAAGCGTAGAAAAGGCTTTCTATAG ATGGCAATTTCACAATTGACTTCATACAGAAGAATAGTATAAATTATCCT AGGCTACAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACCAAAAGG CTCAATCTGAGTTAGATTGGGCTCTTCCAGAAAAAAATTGTACATGGGGG TGGAGGATATTTTATCCGGGGGGTAGATTTGCTCTGTCCGGGGGTAATTT GGGGTGTCCGAGGGGTCAGCAGATGCTTGTTCGGGGTAAAACCTATTGTC TGGGGGGGCCAAAAGTCACCCTATTTGGGGGGTAAATCACTAAAAATTGT TATATCCTCCACCCCCCATGTACAATTTTTTTCTGAAAGAGCCCATTTTT CCAAACTGAAAAATGAGAGTATCAATTAATAAACTGACTAAAATATGGCT GTTTTAAGCCCAAATTTTCCAACTGAATGAAAATATGGTAAAAAAGCTCA ACCAAGGCTTGTGGCCAAGACAGAATAAGGGGCTTGTTAGCACTGTCACT CAATTTTTTCCCACCTGCTGTACCCCAGGTATTTCAGGTTCGAATTTTAT TAAACAATAAGAGATATGGATATCAAAATGGGCTCTTCCAGAAAAAATCC GTTCATGGGGGGTGGAGGATATATTATTTTTTTCATGAATTACCCCTGGA TATTTTGATTTTTAACCCCCTGGACACAGGTTATACCCCTGGACAAACAT CAAATCAACCCCGTGGATACAAAAATTACCCTTGGACATTGGAATTTACC CCCTGGACATTGCAATTTTTTAGTATGTTTTCAATACCCCTGGACAATTC ATCCTCATGCTTATAGAAAGGCAATGTTATGCTTATGAAAAAAAAAAACA TTATTGACCTTTGCAAATCTTCTTAGCAGCATGGGGTCAACCTTCCTCCA CCCGTTAACAGCCGAATGCCATTGAAAATTGAAAATGATTTGTCGATGGC CCCTTCAGGAGTGCAATGTCAAGTTGAAAATAATTAAGAAAACTCCAGAC TCCAGCATCAAAACAACAATAAGAATGAATAAACTCATAAATTATTCTTT TGTGTTTTGTTTTTGTGATGTTGGAGCTTCATCTACCCTGCCGATGCACC AGACTTTTGCTCATCTTCTATTGGATGATGAAAAGTATTATTAGATTACA CCGCTCAAAACTGTCTGGTGTTTGTCTAGTGTTAAGTTGCACAAATTCTT GAAGCTGGTCAAGCACCAGACTTTTTCCTTTTACCCAGCAACAGTAAGAG TGATTCAAATCTGGTCCCTTGTTTTGTTAGGATTGTCCAGTGATAAAGTT TTCTTGGTTGACACCAGCCATTTTGTGTCCGGTGCTTCAGTAAGGCTGCT GTGCTGGCAGGGTAATCTTATTATTCAAGATAGACCTTTTGCTAGTCAGG ATGTTGAATAATTTAAAAAGACCAGCCTAAAACAATGATTAAGAAAAATA AATGCATAATCAGAATAATCATGTGCTATATGAGGTCTTTGTTTTAGTGC TAGAGTTTTTAATTATTCAACAGGACACCCGGACTAGCAATAGGTCTATT TAACATTCTCCCACTCGTTACAATCAAAAACTTNCACAATGAAATCGATG TTTAAATGAGAAAGTGAAAAGTTCGAAAATGACAAGTTATTTGAATGAAT TGAGTGTTTTCTGCGAATAAGTGAATGATAAACCGTGCATTCAACGCGAA TAACTACCTAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTCTTTTAC CTATAACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGTATCATTGG AAAGANAGAAATCCTCATATAGGATATTTTTATTCCCAGACTTGTATTTA TATTTAATGTTCGTACTATCATAAAGATAAACAAATTGAAAAATTGAATT GAATGGGGAATAAGATGTACTGTAGATTGATTTCCACCTTCACATGTTAT GGCCAGACGGTGTCAATCGAATGAATCGAACGTCGAATCAATTGAATGCA ATAGAATAATAATCGCAATCAAATATCACCAAGGATTTGCCCTTCGATCC TTCGATTGTACTGATTATGTTCGATTATACTCGATTGATTTAATTGTATT CAATTTTATTCACTCTCGTACCGTAGAGACTTACACGCTTGGTCGTCCAC GCTAAAAAAGCTCTAAAGAANGTGAATAATCATTCAGTCAAAAGATATCA AACAAAGTTATAAGCTGATTGACGTCTAAAAACGCTGTTTTCTGCAGTTT TTTGCTGTTTTTTGGGGTCAATCACTTATTAACTTTGTATCATAACTTTA TATTGAATAAATATTTTAATGAAATAATAATAATATCTTTCCAATGATAC CAAATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAGGTAAAAGAAA AAAGAGTGCACACTTATCGTGAATAGACTTTAATATGGCCTCGGGACCGT AATATAAGAAGGAAACAACAGTTGCTTTGAGTGCCTTAAGGGAAGAAATT TTGTCGGATAGAAAATTTGGCGGATTTGGATTTAAATTAAGTTCCCGCCA AATTTAAGTTTTTCGGCCATCCGCCAAAATTTCTTCCCTTCAGGTATTAC AAATCAAGCTTCTCAATATCACAGGAAAAAATTATTTATTCCCTAGCCTA GGGATTGTTCATTTTCAGATGTGGTTTTTTATTCGATCACATTAGTCTAG AATTTTAAGTTCGGGAAAGTAAGGAAACTAGGGAAACCTATTTTCCCATG CTGGAAGAGTATTACTAATGTGTTAGTGAAAACGGATTGTGGAAAACTAA TATTTTTAACTTTCTAGTTGCCCATTCAGAATTGCATCGCGAAATTAAAA ATCCCAAGTTTTTCTAAACTGATTATGGATGAGTTGGGAAAAGAGAGATT ACGAGTTTTTAAAATGATTACTTTCTACAAGCTAGGGAAAGGAAATATCA CGAATTGTGACCTTGCTTGCTTTATTCTATTCTTTCTCTGGATCGGGAAA TGTGATTTCTCGAATTAGGGAAATAAAGTTTCCCAGATTGGGAAATTCGA TTTCCCGAACTCTTTAATTTGAGTGTATCCTTTAAACAATTAATCAAGTC AAAACTTATTTTTCAAACCTTCAAATAAGACAATTCAATCAAAAATTTTT AAACTGTCACAAATTAGAGCCTAAAGTTCGGGAAAATTATTTTCAGGTTA GGGAAAATTGATTTCCCTAACTTGTATTACGCATGCGTGAGAAAAAACCA CAAGTGATTTTTCACTCAAAAGTGTTCGAGTCTTATGTAAAGCAAACTAT TATAGGGTTGTATACGATCAGTGTGTAACACAACGCTAAAGGTGAGGCGT CCCGCCAGGGCGGCCTCATTCGTTCGCAATGGACTTGCGTCGCAAGGGCT CAGTGGATCGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTGACAAAAGTGCCGGG ATTCTCAAAGTAGCACAAGTACATGTCAGAACGAATGAGAGCTATCGAAC CAATGCTCACAGAATGATCGAATACATTTAATTACTTTACCAGCTTTCTA TAAATCAGGATTTAATTCGTGAATATGGGTAACCCTATGAGGTTTTATTG GGTTTCGCTCGAGAAAAGCACTTTTCAATAATAGGGAAATTTAACATCCA TAGGTAGTCATAAGATCGGGAAATTTCATTTCCATAACTAGGGAGCTGTT GCATCTTCCCTAGCTAGGGATTGGTTAGGGAAAAATCCAGATTTCCAGAT CTGAAAATATATATTTCCATAGCCTAGGGAATCAAAAAAATTACCCTGTG TATGTCATGAGCACTTTGAAATGTATTGTAAGTTCTCTCCGATATATTGC AAGCACTTACCAATACATTCCTGACAATATATTAATGTTGTAGCCCAGTC AATAGCATTGTCAGGAATGTATAGCGTGAGAAACAGGATCGTGAACTTGA TTAGATTTACTATCTATTTTCAGCTTTGTTCGCCGCTTCGATCATGCTAA AACAGAACAAAGTCAACGGTCTCATCAACCATCTTGTCGACCAGCCCTTC TCCTTATCAGAGAGTGATGTCTGCTACATTCCGAGGGAAGAAACATATGT CAACCTATCGGTTCTCAAGAGCAGTAAAGTAGAAGAGGAGTTCACCAACT CAGACCGTGNTAGCCCTTATTTGTCAAACCGTGAGCTATCCAGCTGTTTA CCGACAATCCTGGGGATCGAACGAATGCGAAAAGATAAAGAGAATAGTCT TTTCATTACATTCTTTGATAACTTGACTAGACTTTACACAACAACAACGC CCTTTATACAAAGGGCATCGAATTGGTTTCAAAGCTTTTTATTTCAGAAA TACATGAAAAAGACTATCATTCCGCAAAGTATGTTTCACAGAAATGTTCT TATGATTGACTGCAATCAACCGGTCTGTAAAGACTTTTTNCCCAATTGAA TTCGTCTTTAGTTTTGCATGCAGAGAGCTTAACACTGTCCTTCATGGAGT CAAAAGCTCGGAAGATCTTTTCGAAAAGTTTTATCCAGAAATATTTAAGC TCATTACAGTTGCCGACTTGAAGGAAATCGCTGACAGAGTTATGATTGTC GTCGACGGCGTCGATG

Coding sequence (CDS) from alignment at sc0000012:1063811..1084276-

>TCONS_00001973 ID=TCONS_00001973|Name=TCONS_00001973|organism=Clytia hemisphaerica|type=CDS|length=1410bp|location=Sequence derived from alignment at sc0000012:1063811..1084276- (Clytia hemisphaerica)
CTTTGTTCGCCGCTTCGATCATGCTAAAACAGAACAAAGTCAACGGTCTC
ATCAACCATCTTGTCGACCAGCCCTTCTCCTTATCAGAGAGTGATGTCTG
CTACATTCCGAGGGAAGAAACATATGTCAACCTATCGGTTCTCAAGAGCA
GTAAAGTAGAAGAGGAGTTCACCAACTCAGACCGTGNTAGCCCTTATTTG
TCAAACCGTGAGCTATCCAGCTGTTTACCGACAATCCTGGGGATCGAACG
AATGCGAAAAGATAAAGAGAATAGTCTTTTCATTACATTCTTTGATAACT
TGACTAGACTTTACACAACAACAACGCCCTTTATACAAAGGGCATCGAAT
TGGTTTCAAAGCTTTTTATTTCAGAAATACATGAAAAAGACTATCATTCC
GCAAAGTATGTTTCACAGAAATGTTCTTATGATTGACTGCAATCAACCGG
TCTGTAAAGACTTTTTNCCCAATTGAGGAAACCGAGGTGACTATTGCCTA
CCAGAGGTTTGCACATATATAGCAGACTGTATCGGCGATCAACGCGACGA
CTTTCTTCAGCGATTAGGACTTCAGGTAAATAATGGCCAAGACACAAAAG
AACTTATTAAGAACACACCATGGCCGGATATCAAAAGAACATTGATAACA
CTTGGAAAGGCTGATATTGTTGATTGGATCAAAGGAAATACATTAATAAC
GCAAGCTTTGTTCGCCGCTTCGATCATGCTAAAACAGAACAAAGTCAACG
GTCTCATCAACCATCTTGTCGACCAGCCCTTCTCCTTATCAGAGAGTGAT
GTCTGCTACATTCCGAGGGAAGAAACATATGTCAACCTATCGGTTCTCAA
GAGCAGTAAAGTAGAAGAGGAGTTCACCAACTCAGACCGTGNTAGCCCTT
ATTTGTCAAACCGTGAGCTATCCAGCTGTTTACCGACAATCCTGGGGATC
GAACGAATGCGAAAAGATAAAGAGAATAGTCTTTTCATTACATTCTTTGA
TAACTTGACTAGACTTTACACAACAACAACGCCCTTTATACAAAGGGCAT
CGAATTGGTTTCAAAGCTTTTTATTTCAGAAATACATGAAAAAGACTATC
ATTCCGCAAAGTATGTTTCACAGAAATGTTCTTATGATTGACTGCAATCA
ACCGGTCTGTAAAGACTTTTTNCCCAATTGAGGAAACCGAGGTGACTATT
GCCTACCAGAGGTTTGCACATATATAGCAGACTGTATCGGCGATCAACGC
GACGACTTTCTTCAGCGATTAGGACTTCAGGTAAATAATGGCCAAGACAC
AAAAGAACTTATTAAGAACACACCATGGCCGGATATCAAAAGAACATTGA
TAACACTTGGAAAGGCTGATATTGTTGATTGGATCAAAGGAAATACATTA
ATAACGCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001016XLOC_001016Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001973-proteinTCONS_00001973-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001973-exon-sc0000012-1575043694:1084047..1084276TCONS_00001973-exon-sc0000012-1575043694:1084047..1084276Clytia hemisphaericaexon
TCONS_00001973-exon-sc0000012-1575043694:1063811..1064453TCONS_00001973-exon-sc0000012-1575043694:1063811..1064453Clytia hemisphaericaexon
TCONS_00001973-exon-sc0000012-1510915933:1084047..1084276TCONS_00001973-exon-sc0000012-1510915933:1084047..1084276Clytia hemisphaericaexon
TCONS_00001973-exon-sc0000012-1510915933:1063811..1064453TCONS_00001973-exon-sc0000012-1510915933:1063811..1064453Clytia hemisphaericaexon
TCONS_00001973-exon-sc0000012-1491911889:1084047..1084276TCONS_00001973-exon-sc0000012-1491911889:1084047..1084276Clytia hemisphaericaexon
TCONS_00001973-exon-sc0000012-1491911889:1063811..1064453TCONS_00001973-exon-sc0000012-1491911889:1063811..1064453Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:1063811..1084276 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.052103 0 0.0591864 0 0.0569379 0.686931 0.836026 0.450247 1.89619 0.324793 0.711686 7.63999 7.52827 5.15772 5.76293 2.04561 1.68557 6.13414 6.0029 1.18817 0.453558 0.796408 0.724051 2.69619 3.17425 1.02569 0.860078 0.355821 0.0604209
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001973 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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