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TCONS_00001941 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001941
Unique NameTCONS_00001941
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2523

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001941 ID=TCONS_00001941|Name=TCONS_00001941|organism=Clytia hemisphaerica|type=transcript|length=2523bp
CTCATTTCAATAAGACAAGCCTGTGTTGAATTCACTGTTTCCTAGTCGGA
AAATATAATTTATCTTTGGTTATATTTCAATTACTGTATATATAGCAATA
CAATATCGAAATCAAAGATGGGATGTCTTCTTGGTTTGAGAAATCGTTTT
TCTAAACTTATTGGAAGACTTCGCAATAGAAGGAACAACCAACCTCCAGT
TGAAGAGACAACCAGTAACAAAGCCGTGAACTTATGCATCAACATCAATA
ATAACACAAACTATATCGATGGGCTCACTATTCAGTATAATGATGGCGAA
ACTGAGAAAAGATTGCTAAAGCTTGAGGAAACTGAGTTTACTTCCAATGA
CCAATTCACAAAGAAAGAATCAAGGGGGCTTTTAGCACCGCCATCATTTC
GTTATGTTGATGATGAAGAACCAGAATTCTCGAATGTCACAAATGCAGCA
CCTGAAGGCTTCGGCGATTATTCGAGGACTCCTGTTTGTGGTGTATCCCT
CATACCTCTTGAAAACTTTCCCCAGCAACCTTCGTTCGAACACAACCGAT
CTTGTCAGGCTAATGATGTTATCCCTTCAGCAAAGCAGCCAATTGAGTCA
TTGGCTGATTGTAATGCAATGGATGTATCGGTTCCGCAGCTTGGAGACAT
CGAATTGGACCAGCAAACACTTTCGGTAGCAAGTAGTTTGTTCATGGATG
CTTACTTAGAAATCTTGAGTCAGCATTTACAAGAAGAGCCTGTTTGTGCA
AGAAGTGACGTCAGCCCTCCGATGGAATCGTTGCCAAGAAAACATGGTGA
TGATAATGTAGCAAAAATCGCCAACATGGTTGAAGAAATCGTTGAGAGTA
ATGGCCAAGACGTTCACTTTTATCAAGCTGAATCAGATACTGTCGAAGAG
GAAACAATTGTTGTGGGAAGAATTGCAGATAACTTGAAAGCTTCTTGTGA
GGCGGCTATTCCTGACCTTCTTACAGAAAATGAAACGTCTATCGATGGAA
ACATTCTgattacaaaaagaaagaatgaaGCTGTCGAAAGTGATCATGAG
ACTGAACTTTCGTCTGACAGTGAAGGGTTAGATAATATCAAGAATGAAGA
TGTCCGGTTAGTACCCAGACCAAAGAAGCGACGGAATCGCACTAAAAGAG
GAAAGTCTAAACCCTATGAGAGAACCCAACAGGTCAACGATCACGTGtca
acaaaaaagatttcaactgATTCAAGACCAAATATGGCCACAGTTTTTGC
CCAAGATACCAGTGAAAACCAAACTACACCTTCGACAAAAAATGAGGGGA
AACGGCCTCGAAccgaaaaagagaaaaaggcaGAAAGGCAAAATGCAATT
AGATATCGCTTCAATATTAAGCTTAATGAGAAGGTCAAAGCCCTTGAACG
CCAGCTGCAAGATTCCTCTATGCAACTTGAGAAAGATTGTATGAGACAAC
CAATCCAAGCAAATGTGGACAAACTTGTTTCTCTTCTTTTTCAGCAGGAT
AAAGACGACGATGAAATCTTCAAGCATGCCTGTCGCATGATATCAAATTT
CATTAGCGAGATCCGATTTGGCGATTTAGATGAGCCAACCATGGCTgcta
aaaaaaagctttttgagACCATGATTATGCCAGCTATCAGAAAAAAGCAC
CCGGAAATGGCAAGTCAATTAGCAACGGCCTTTCAGGTGAATTATGTGAA
ACATCACATGACAGAAAACGGGGATTGGCTTGCATCGATTAGAAAATTTT
ACCGAGAcgaatttttgaaataacaGTCGATTAAAATATATCAACACTGT
ACGGTATGAATGAATTTGATTTGGTTTGTTTGAATGATAAATGGTTTGGT
TAAATTGACAGAATAACAAAGCtttatttgatgatttttctttattaaat
tcggttcaaAACTATATATTACATAAACACTTTATGTCGAGCACTGTCTT
TGGTGATGCAAACCATAGCTAAAAGATATAGCTTAGCTGATTTATCAAAT
cttgatttaaaggttttatttttacataagtgttcccgttttatatcaga
cacatatttcatatcaagaCAGTGTCAgccttttgttatattttgctgat
atgtaatagttatcggacagttgcgagtacaatatgagaaatattttacg
agttccgagatttttccgtacaattaTATGGAAAATCCGGAacaagtgaa
atatttccatattgtacgagcaacaatgtctgataactggtttatcggtg
acccaaaaaatgcattttttgtgtttgaggacacttttgtagcaaagtga
cgttagattgcttctaccgctacaatgcaacaacatcttttcgtcaattt
atatttttacatgtaaaatacaagatatattgtactctttttaaccagtC
AAATTGCACGTATTTTTTGGATTCCcgataaaagcaaaaaatgtttttct
tttcctctttgtgaccaatcttgctccacaaacGTGTTAGTCCAATGttc
aaaagcttttgaattaaaattgc
Run BLAST on NCBI

protein sequence of TCONS_00001941-protein

>TCONS_00001941-protein ID=TCONS_00001941-protein|Name=TCONS_00001941-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
MGCLLGLRNRFSKLIGRLRNRRNNQPPVEETTSNKAVNLCININNNTNYI
DGLTIQYNDGETEKRLLKLEETEFTSNDQFTKKESRGLLAPPSFRYVDDE
EPEFSNVTNAAPEGFGDYSRTPVCGVSLIPLENFPQQPSFEHNRSCQAND
VIPSAKQPIESLADCNAMDVSVPQLGDIELDQQTLSVASSLFMDAYLEIL
SQHLQEEPVCARSDVSPPMESLPRKHGDDNVAKIANMVEEIVESNGQDVH
FYQAESDTVEEETIVVGRIADNLKASCEAAIPDLLTENETSIDGNILITK
RKNEAVESDHETELSSDSEGLDNIKNEDVRLVPRPKKRRNRTKRGKSKPY
ERTQQVNDHVSTKKISTDSRPNMATVFAQDTSENQTTPSTKNEGKRPRTE
KEKKAERQNAIRYRFNIKLNEKVKALERQLQDSSMQLEKDCMRQPIQANV
DKLVSLLFQQDKDDDEIFKHACRMISNFISEIRFGDLDEPTMAAKKKLFE
TMIMPAIRKKHPEMASQLATAFQVNYVKHHMTENGDWLASIRKFYRDEFL
K
Run BLAST on NCBI

transcript from alignment at sc0000012:560025..565825-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001941 ID=TCONS_00001941|Name=TCONS_00001941|organism=Clytia hemisphaerica|type=transcript|length=5801bp|location=Sequence derived from alignment at sc0000012:560025..565825- (Clytia hemisphaerica)
CTCATTTCAATAAGACAAGCCTGTGTTGAATTCACTGTTTCCTAGTCGGA AAATATAATTTATCTTTGGTTATATTTCAATTACTGTATATATAGCAATA CAATATCGAAATCAAAGATGGGATGTCTTCTTGGTTTGAGAAATCGTTTT TCTAAACTTATTGGAAGACTTCGCAATAGAAGGAACAACCAACCTCCAGT TGAAGAGACAACCAGTAACAAAGGTAGACTTTTTTTACTAAGATTTAAAC AGTGCTTTGGACGAGGTTTGGTGTTTTTTTTCAATAAATGAATAATATCT CAGTGTCTTTTTTTTTTACCTGGGTCATTTCGGACAAGTTTTTAGTGTGT AAGTGTATATGATCTTTTAAAAGAAGCATTGTTTAGCCTCGGCTATTCAA AATTTAGGTTTAAAATGATCTTAACAACCTTACTCTTGTCTACCGATTAG NCTTGAGTGTTGACCTACTTCTGATAGCTAGGCGTAAAAAGGGGGACGAG ATGGAGTTTTTACAAGCTTTTATTTAATTTGGTTGGTTAACCAGTAATAA AACAATTTTGTGACTTTTTCTAAAGAACGCGTCATTTTTATTACTTCAAG TGACCAATTATCAAAGTATCTTATAAAAACTCCATCTCATCTGAGAGGTC TCAGCATCTAATTTCTCAAGAATGGTTCATAAATTTGTCTTTAAACTTCG TTACAAGGTGTACAGTATGTGGCGCCCAAAACGGCGATCAAATTTAAAAT TTCTCCCAAATCTAGAGGAAAAGACGTTTTACAAAAATTTTTGCTGTATG AAAAACTTTAACATCTCTACTTTATTTCCCAGAAGTTATTTTTCAAAATT TTAAATTTCAACAATATTTTTCAATCGCTTAAAGATAGGTAGCTTTTTTT AATGGCCCCCAAAGCGGAGGTTTGCAATTTTAGCGATTTCTCGAGATATC TTTATTGAAATGTGATTTAGAGGGTTTTGGGCACAAATTTGTTTGATAAA ATTTTTACAGTATACCATTGGTTGTCAAAACGGAGGTTTGGGGCCCCCAA AACGTAGGTGTAGTTAAAATCAAATTATTAAGCCCAGTGGTAATAGGGGG AGAAACATATTTGTGTTTTCCTTAAATTTACGACCCGATGGATCTAAAAT TTATGCTTTTTATGAAAAATTTCAAGAAATTCGATGATGCCAAGTCCAAA CTGAAAATTTAGAAATTTTCAAAATGACAACTTTGATTTAACAACGTCTT AATCAAGTTTCTGAAAACCAATCTCTTTTGAAAATAGTTCCATTCATGTA TGGAATAAGCTGTGAAAATTTTAGAAAAACAGCTTAACTGAAACTGAAAA TATTAAGGGGTTTCCCACTGGAAATGCTAAAATGCTCAATAATGGTCCAA TAAACTTGATATTTGGTCACATGAAAGTATTTGAGGTAAAAATAAATTAA AAAAAAAAATTTTTCAATTTCCCTAATTTTCCTCATTTTGAGCATGATTT ATTAGCCATTTAGAGGGCTCCATTCTGCAGTAAATTGAGGACGCAATTTT GATCAGAATGTTTTCAAATTTTGCAGGTGCATTTTATATAGAATTTTCCA TGTTCGCTATAAATTCCTAAGAGTTTGGACTATTTTTTGTTGAGCTATGC TATTTTAAGTACACAGTTATTAATTTGGCAAAACTTGGAGAAACTTCAAA TCGTCACATTGAGCTCAATTTTTTTGCTGTCTTAAAGAAATTTATAGGGA ACATGCATAATTCTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNTTTCTGCAGACTTTCTAAAAATTAAATGGAGAAAATCACGTTTAA AGTTTTTTCTTTACATTTTAGCCAAGAAAAGGACAAAGAAGGTCTAATTG ACCAATTTTTTTGCTTTTTTCTAAAAGTTGGACATATCAGCAGTCATTTA AAGTTTTAAAAGTCACTTTGATCACAAACGGCGAGCCCTAACGGCGAGCC TTGTCAAATTTCCTTGTTTAAATCTTAGGCGCAAAATAACTCCTTGTGGT GGGCGGGGAAATTCCCCAATGACCAAAAAATTTCCCCAGAAGTGAAGTTC AACCAACAGGAAGTCTTTCTAGGTCAACTTTGAAAATGGTATTTTCCGGT GGGGAACCACCTTAAGCTTTAAAGGTATTTTTCTCCTACATTTTGCAAAA AAAATGACAGAATTTGCCGTTTTGGCTGATTCAGCGAAAATTTTTATATG TAATATTAATTTTTTGTTACAAACTATTATTTCAAGCTGATAGGAATGGA ATTCCAATATTTTTTGCTGTTTCTCTAGACTAGTAAAATAATTGTTGAAA ACAGACCCATATACAAAAAATTCAAGCTCCAAATAAAAAGAATAGAAGAG GCGAGGTTGCGTGTCTTTTCTGAATTTCAACGACTAGAAGCTTCTTCCCT CAAAAAACGTTGTTTAATTTTACAACGTTTTTTAGGTTTTTGAGAATCCA TCCAACTTTTTTGACTAAATGATATTTCATAGTAACATTAAACATGGGGA CATATAAATAAATGAGCATTTCCAAAAATGCAATAAACAGAAAGAAAAAT AAATGCAATCCCGCACGGGTCAGACATACAAAAATCTGTATGTCTCTCCT TACGATTTTAGGTGAAGAAAAAAAGGCGTTGGAAAATTATTTAATTCTGA TAAATCTACACGTCAAAATCCTCATTTTAATGATGACCTCCGTTTTGGGG GCCGTCTCCGTTTTGGAGGCCATATACTGTATATTGCCAAAGTCGATTTT TTGAAAAAAGTTTTGATGACGTCAGAAAAAACAAGGGTTCTTCGATTTTT GCTGACGTCCTCAAAATTTAGACGTTTTTTAAAACTTCCCGGGGATACTT AGGCAAACCACTTTTTTAGAAATCTTGTGAATAATCTAAAACCTTTTGGA ACTTGTTATATGACATGAATGGATTCAAATCAAAAAAGTTTTAATGGCTG TTTCCTATCCATCTCCTTTACTCGTTCCCAGACCTTTTTAAGATTTTGTG ACGTCATCAGGGTGGTCACACATCAATTTTAATTTGATTATACCCCTGTC ACCTTGAAAAATGTGCTCTAAAGCTTTCAAGGGTTACATAGACAACAAGA AAGAGCTTTTTAACCTCAAGTATCAACAAGTTTTTAACCGTTTCTCATAA ATATCTTTCATTTGAGTGCGAAAGTTTTTTCCTATAGATACCTTGGAAGA AAACCTGGGGGGAAGAACGTTCACCAAGGACACCGAGACAGGTGTGCTAG GAGAACGGTAGCATAAAAAGGTGAAATTGATTTTTTTGCATTCCTTTTCA GCCGTGAACTTATGCATCAACATCAATAATAACACAAACTATATCGATGG GCTCACTATTCAGTATAATGATGGCGAAACTGAGAAAAGATTGCTAAAGC TTGAGGAAACTGAGTTTACTTCCAATGACCAATTCACAAAGAAAGAATCA AGGGGGCTTTTAGCACCGCCATCATTTCGTTATGTTGATGATGAAGAACC AGAATTCTCGAATGTCACAAATGCAGCACCTGAAGGCTTCGGCGATTATT CGAGGACTCCTGTTTGTGGTGTATCCCTCATACCTCTTGAAAACTTTCCC CAGCAACCTTCGTTCGAACACAACCGATCTTGTCAGGCTAATGATGTTAT CCCTTCAGCAAAGCAGCCAATTGAGTCATTGGCTGATTGTAATGCAATGG ATGTATCGGTTCCGCAGCTTGGAGACATCGAATTGGACCAGCAAACACTT TCGGTAGCAAGTAGTTTGTTCATGGATGCTTACTTAGAAATCTTGAGTCA GCATTTACAAGAAGAGCCTGTTTGTGCAAGAAGTGACGTCAGCCCTCCGA TGGAATCGTTGCCAAGAAAACATGGTGATGATAATGTAGCAAAAATCGCC AACATGGTTGAAGAAATCGTTGAGAGTAATGGCCAAGACGTTCACTTTTA TCAAGCTGAATCAGATACTGTCGAAGAGGAAACAATTGTTGTGGGAAGAA TTGCAGATAACTTGAAAGCTTCTTGTGAGGCGGCTATTCCTGACCTTCTT ACAGAAAATGAAACGTCTATCGATGGAAACATTCTGATTACAAAAAGAAA GAATGAAGCTGTCGAAAGTGATCATGAGACTGAACTTTCGTCTGACAGTG AAGGGTTAGATAATATCAAGAATGAAGATGTCCGGTTAGTACCCAGACCA AAGAAGCGACGGAATCGCACTAAAAGAGGAAAGTCTAAACCCTATGAGAG AACCCAACAGGTCAACGATCACGTGTCAACAAAAAAGATTTCAACTGATT CAAGACCAAATATGGCCACAGTTTTTGCCCAAGATACCAGTGAAAACCAA ACTACACCTTCGACAAAAAATGAGGGGAAACGGCCTCGAACCGAAAAAGA GAAAAAGGCAGAAAGGCAAAATGCAATTAGATATCGCTTCAATATTAAGC TTAATGAGAAGGTCAAAGCCCTTGAACGCCAGCTGCAAGATTCCTCTATG CAACTTGAGAAAGATTGTATGAGACAACCAATCCAAGCAAATGTGGACAA ACTTGTTTCTCTTCTTTTTCAGCAGGATAAAGACGACGATGAAATCTTCA AGCATGCCTGTCGCATGATATCAAATTTCATTAGCGAGATCCGATTTGGC GATTTAGATGAGCCAACCATGGCTGCTAAAAAAAAGCTTTTTGAGACCAT GATTATGCCAGCTATCAGAAAAAAGCACCCGGAAATGGCAAGTCAATTAG CAACGGCCTTTCAGGTGAATTATGTGAAACATCACATGACAGAAAACGGG GATTGGCTTGCATCGATTAGAAAATTTTACCGAGACGAATTTTTGAAATA ACAGTCGATTAAAATATATCAACACTGTACGGTATGAATGAATTTGATTT GGTTTGTTTGAATGATAAATGGTTTGGTTAAATTGACAGAATAACAAAGC TTTATTTGATGATTTTTCTTTATTAAATTCGGTTCAAAACTATATATTAC ATAAACACTTTATGTCGAGCACTGTCTTTGGTGATGCAAACCATAGCTAA AAGATATAGCTTAGCTGATTTATCAAATCTTGATTTAAAGGTTTTATTTT TACATAAGTGTTCCCGTTTTATATCAGACACATATTTCATATCAAGACAG TGTCAGCCTTTTGTTATATTTTGCTGATATGTAATAGTTATCGGACAGTT GCGAGTACAATATGAGAAATATTTTACGAGTTCCGAGATTTTTCCGTACA ATTATATGGAAAATCCGGAACAAGTGAAATATTTCCATATTGTACGAGCA ACAATGTCTGATAACTGGTTTATCGGTGACCCAAAAAATGCATTTTTTGT GTTTGAGGACACTTTTGTAGCAAAGTGACGTTAGATTGCTTCTACCGCTA CAATGCAACAACATCTTTTCGTCAATTTATATTTTTACATGTAAAATACA AGATATATTGTACTCTTTTTAACCAGTCAAATTGCACGTATTTTTTGGAT TCCCGATAAAAGCAAAAAATGTTTTTCTTTTCCTCTTTGTGACCAATCTT GCTCCACAAACGTGTTAGTCCAATGTTCAAAAGCTTTTGAATTAAAATTG C

Coding sequence (CDS) from alignment at sc0000012:560025..565825-

>TCONS_00001941 ID=TCONS_00001941|Name=TCONS_00001941|organism=Clytia hemisphaerica|type=CDS|length=3312bp|location=Sequence derived from alignment at sc0000012:560025..565825- (Clytia hemisphaerica)
CCGTGAACTTATGCATCAACATCAATAATAACACAAACTATATCGATGGG
CTCACTATTCAGTATAATGATGGCGAAACTGAGAAAAGATTGCTAAAGCT
TGAGGAAACTGAGTTTACTTCCAATGACCAATTCACAAAGAAAGAATCAA
GGGGGCTTTTAGCACCGCCATCATTTCGTTATGTTGATGATGAAGAACCA
GAATTCTCGAATGTCACAAATGCAGCACCTGAAGGCTTCGGCGATTATTC
GAGGACTCCTGTTTGTGGTGTATCCCTCATACCTCTTGAAAACTTTCCCC
AGCAACCTTCGTTCGAACACAACCGATCTTGTCAGGCTAATGATGTTATC
CCTTCAGCAAAGCAGCCAATTGAGTCATTGGCTGATTGTAATGCAATGGA
TGTATCGGTTCCGCAGCTTGGAGACATCGAATTGGACCAGCAAACACTTT
CGGTAGCAAGTAGTTTGTTCATGGATGCTTACTTAGAAATCTTGAGTCAG
CATTTACAAGAAGAGCCTGTTTGTGCAAGAAGTGACGTCAGCCCTCCGAT
GGAATCGTTGCCAAGAAAACATGGTGATGATAATGTAGCAAAAATCGCCA
ACATGGTTGAAGAAATCGTTGAGAGTAATGGCCAAGACGTTCACTTTTAT
CAAGCTGAATCAGATACTGTCGAAGAGGAAACAATTGTTGTGGGAAGAAT
TGCAGATAACTTGAAAGCTTCTTGTGAGGCGGCTATTCCTGACCTTCTTA
CAGAAAATGAAACGTCTATCGATGGAAACATTCTGATTACAAAAAGAAAG
AATGAAGCTGTCGAAAGTGATCATGAGACTGAACTTTCGTCTGACAGTGA
AGGGTTAGATAATATCAAGAATGAAGATGTCCGGTTAGTACCCAGACCAA
AGAAGCGACGGAATCGCACTAAAAGAGGAAAGTCTAAACCCTATGAGAGA
ACCCAACAGGTCAACGATCACGTGTCAACAAAAAAGATTTCAACTGATTC
AAGACCAAATATGGCCACAGTTTTTGCCCAAGATACCAGTGAAAACCAAA
CTACACCTTCGACAAAAAATGAGGGGAAACGGCCTCGAACCGAAAAAGAG
AAAAAGGCAGAAAGGCAAAATGCAATTAGATATCGCTTCAATATTAAGCT
TAATGAGAAGGTCAAAGCCCTTGAACGCCAGCTGCAAGATTCCTCTATGC
AACTTGAGAAAGATTGTATGAGACAACCAATCCAAGCAAATGTGGACAAA
CTTGTTTCTCTTCTTTTTCAGCAGGATAAAGACGACGATGAAATCTTCAA
GCATGCCTGTCGCATGATATCAAATTTCATTAGCGAGATCCGATTTGGCG
ATTTAGATGAGCCAACCATGGCTGCTAAAAAAAAGCTTTTTGAGACCATG
ATTATGCCAGCTATCAGAAAAAAGCACCCGGAAATGGCAAGTCAATTAGC
AACGGCCTTTCAGGTGAATTATGTGAAACATCACATGACAGAAAACGGGG
ATTGGCTTGCATCGATTAGAAAATTTTACCGAGACGAATTTTTGAAATAA
ATGGGATGTCTTCTTGGTTTGAGAAATCGTTTTTCTAAACTTATTGGAAG
ACTTCGCAATAGAAGGAACAACCAACCTCCAGTTGAAGAGACAACCAGTA
ACAAAGCCGTGAACTTATGCATCAACATCAATAATAACACAAACTATATC
GATGGGCTCACTATTCAGTATAATGATGGCGAAACTGAGAAAAGATTGCT
AAAGCTTGAGGAAACTGAGTTTACTTCCAATGACCAATTCACAAAGAAAG
AATCAAGGGGGCTTTTAGCACCGCCATCATTTCGTTATGTTGATGATGAA
GAACCAGAATTCTCGAATGTCACAAATGCAGCACCTGAAGGCTTCGGCGA
TTATTCGAGGACTCCTGTTTGTGGTGTATCCCTCATACCTCTTGAAAACT
TTCCCCAGCAACCTTCGTTCGAACACAACCGATCTTGTCAGGCTAATGAT
GTTATCCCTTCAGCAAAGCAGCCAATTGAGTCATTGGCTGATTGTAATGC
AATGGATGTATCGGTTCCGCAGCTTGGAGACATCGAATTGGACCAGCAAA
CACTTTCGGTAGCAAGTAGTTTGTTCATGGATGCTTACTTAGAAATCTTG
AGTCAGCATTTACAAGAAGAGCCTGTTTGTGCAAGAAGTGACGTCAGCCC
TCCGATGGAATCGTTGCCAAGAAAACATGGTGATGATAATGTAGCAAAAA
TCGCCAACATGGTTGAAGAAATCGTTGAGAGTAATGGCCAAGACGTTCAC
TTTTATCAAGCTGAATCAGATACTGTCGAAGAGGAAACAATTGTTGTGGG
AAGAATTGCAGATAACTTGAAAGCTTCTTGTGAGGCGGCTATTCCTGACC
TTCTTACAGAAAATGAAACGTCTATCGATGGAAACATTCTGATTACAAAA
AGAAAGAATGAAGCTGTCGAAAGTGATCATGAGACTGAACTTTCGTCTGA
CAGTGAAGGGTTAGATAATATCAAGAATGAAGATGTCCGGTTAGTACCCA
GACCAAAGAAGCGACGGAATCGCACTAAAAGAGGAAAGTCTAAACCCTAT
GAGAGAACCCAACAGGTCAACGATCACGTGTCAACAAAAAAGATTTCAAC
TGATTCAAGACCAAATATGGCCACAGTTTTTGCCCAAGATACCAGTGAAA
ACCAAACTACACCTTCGACAAAAAATGAGGGGAAACGGCCTCGAACCGAA
AAAGAGAAAAAGGCAGAAAGGCAAAATGCAATTAGATATCGCTTCAATAT
TAAGCTTAATGAGAAGGTCAAAGCCCTTGAACGCCAGCTGCAAGATTCCT
CTATGCAACTTGAGAAAGATTGTATGAGACAACCAATCCAAGCAAATGTG
GACAAACTTGTTTCTCTTCTTTTTCAGCAGGATAAAGACGACGATGAAAT
CTTCAAGCATGCCTGTCGCATGATATCAAATTTCATTAGCGAGATCCGAT
TTGGCGATTTAGATGAGCCAACCATGGCTGCTAAAAAAAAGCTTTTTGAG
ACCATGATTATGCCAGCTATCAGAAAAAAGCACCCGGAAATGGCAAGTCA
ATTAGCAACGGCCTTTCAGGTGAATTATGTGAAACATCACATGACAGAAA
ACGGGGATTGGCTTGCATCGATTAGAAAATTTTACCGAGACGAATTTTTG
AAATAAATGGGATGTCTTCTTGGTTTGAGAAATCGTTTTTCTAAACTTAT
TGGAAGACTTCGCAATAGAAGGAACAACCAACCTCCAGTTGAAGAGACAA
CCAGTAACAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001004XLOC_001004Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001941-proteinTCONS_00001941-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001941-exon-sc0000012-1575043694:565603..565825TCONS_00001941-exon-sc0000012-1575043694:565603..565825Clytia hemisphaericaexon
TCONS_00001941-exon-sc0000012-1575043694:560025..562324TCONS_00001941-exon-sc0000012-1575043694:560025..562324Clytia hemisphaericaexon
TCONS_00001941-exon-sc0000012-1510915933:565603..565825TCONS_00001941-exon-sc0000012-1510915933:565603..565825Clytia hemisphaericaexon
TCONS_00001941-exon-sc0000012-1510915933:560025..562324TCONS_00001941-exon-sc0000012-1510915933:560025..562324Clytia hemisphaericaexon
TCONS_00001941-exon-sc0000012-1491911889:565603..565825TCONS_00001941-exon-sc0000012-1491911889:565603..565825Clytia hemisphaericaexon
TCONS_00001941-exon-sc0000012-1491911889:560025..562324TCONS_00001941-exon-sc0000012-1491911889:560025..562324Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:560025..565825 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.229414 0.205264 0.372644 0.91225 0.283685 0.171838 1.081 0.876999 1.053 1.89889 0.69904 0.665085 2.09339 2.80039 2.75286 3.81809 1.13617 1.02642 2.17791 2.37509 1.46453 1.17162 1.69496 1.83652 5.41053 7.32082 2.52435 3.44884 6.31527 4.04107
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001941 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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