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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001924 ID=TCONS_00001924|Name=TCONS_00001924|organism=Clytia hemisphaerica|type=transcript|length=2957bp aaaacattgctgTAGTCTTTAAACAACTTTGCCAACCTATAATGAAGCTC AGATCGGCATTGCCGATCTAAAAACAAGTCTAGGTTGGCAGAATTTTCAC GATTTGCTTCTACTTGAAATTCAAGGGCTgagttttagcctcaaaacaAT TGACACAAGTTAACTAATGATGAGGCAGTGCAGAGAGGTGGTTCTCTTgt aaattagactttaactctaatgTAGGTACTGAAAGAAAATGCAAGGTTTG AACACAAATATCCAGGCATTCAAAGACAGCCcattattttcaacattttt accCAAGTCTACCAAAGATCAGAGTCAAAATTATGGTCAAGATAAGAAGA CAGAACATTATAATGCATCATCTTGTTTGCCACTCGATGCTTCAtttgaa tttgatcaatttttcaatacCCACGTGTTCACTTCTGGACTGACGGACAA TGGTAAAACTTTGGCCATCTTTGAACAAGATGATAAAGGAAATTTAAACA TGCATAAATATTGCTATCATAAAGGCCAGATTGNTTAACATTTCTGAAGG TTTTTTGGATTAGTTTTCAGCCCTCGAATTTCAGGTCAGCATTATGCAGT GCAGACCTAAAAGCCAACCAAAGAATGTGTATGATTGGCAGTTCATTGCC GACCATAATCATCAATTCTTTTGGCAGCAGACCATAAgtgataattgaaa aaaaaacattgctgTAGTCTTTAAACAACTTTGCCAACCTATAATGAAGC TCAGATCGGCATTGCCGATCTAAAAACAAGTCTAGGTTGGCAGAATTTTC ACGATTTGCTTCTACTTGAAATTCAAGGGCTgagttttagcctcaaaaca ATTGACACAAGTTAACTAATGATGAGGCAGTGCAGAGAGGTGGTTCTCTT gtaaattagactttaactctaatgTAGGTACTGAAAGAAAATGCAAGGTT TGAACACAAATATCCAGGCATTCAAAGACAGCCcattattttcaacattt ttaccCAAGTCTACCAAAGATCAGAGTCAAAATTATGGTCAAGATAAGAA GACAGAACATTATAATGCATCATCTTGTTTGCCACTCGATGCTTCAtttg aatttgatcaatttttcaatacCCACGTGTTCACTTCTGGACTGATGGAC AATGGTAAAACTTTGGCCATCTTTGAACAAGATGATAAAGGAAATTTAAA CATGCATAAATATTGCTATCATAAAGGCCAGATTCAAAGTCTTCATTCCA GACACTTTAACACATGGTTGATTCGAGATTATGATTATCTTGTCAGTTAT GATGGCTTATTTGTTGTAATGTTTAATTCTGAAGAACTTGCACATGAAAG AGACCATCGAAGGAGACGAAAACGTGGCTATGGCCTGGGAGAGAAAGTTT ACATTTCTTTGCTAGTTTATGACCATGATTTTGAAAATGGTCGAAGTGCA ATGGGGAAATTTTTCCCGAATTCCTTTGTACTTACCATGTCTGACAAGGA TGATTCATTGTTTTGGAAATATAAACATGGATATGCTATTGGGGTTGATG GCACCATAATTGTCTCCTCATGGGGCGTGACTAGAGACACTTTAGATGAA CAAGATACGGGTGGGACTGCTTTATATTTGAATTATTTCAAAGTTCAACA AACAAGCTCTAAAATTGCTGTCAAACATTGTGGTTTTACAGATTTGAGTG GTGCGTTGACTGGCAAACCGTTACCAACAGCTTTCAACGATCCTGAACAN GAAAGAGACCATCGAAGGAGACGAAAACGTGGCTATGGCCTGGGAGAGAA AGTTTACATTTCTTTGCTAGTTTATGACCATGATTTTGAAAATGGTCGAA GTGCAATGGGGAAATTTTTCCCTAATTCCTTTGTACTTACCATGTCTGAC AAGGATGATTCATTGTTTTGGAAATATAAACATGGATATGCTATTGGCGT TGATGGCACCATAATTGTCTCCTCGTGGGGCGTGACTAGAGACACTTTAG ATGAACAAGATACGGGTGGGACTGCTTTATATTTGAATTATTTCAAAGTT CAACAAACAAGCTCTAAAATTGCTGTCAAACATTGTGGTTGTACAGATTT GAGTGGTGCGTTGACTGGCAAACCGTTACCAACAGCTTTCAACGATCCTG CTATTGTATGCAACCAAAACATTACTAAAGTCTTCTTTTTGAGTCATAAT ATGGTTTACAACGTGATGACGCACTCAATGAGTACATTATCCGAACAAGC TTTCCAACATAATGTATGGGTTATTCATAGACGGTACGGTGAAATACTGA TAACCATAGACAGGCCAACTTTCTCGCTACTCAATGTCAAAATATTCAAA GAGAACGACAAAGGCGAGTATGATCtagtaaacaaattcaaaacaagTCG AATTATAAGAccaaatgataattttatggaagAGCCTACAATGCATTGTC ATGGTATAAACAATGGAGAGACTCGACTATTTGTAGAACCAACTCAATCA TCACGCACGATCTTTGCTGTCAATCCGTTCACTTTAAACATTGATTTCAT TTTGGGCATTCCTGCAAAGCTTGAGGAACCATTTGTGCGTAAAGTCCTTC AGAGTGGTGATGAAATTACAGTCCTTGTTACCAGTAATTCTGCTGAGTAT CTGGTCTCTTATAACATTAACAAATGCACTGAACTGAAAAGTCTCAAGGA GCTTTCAGCTTTGGTGGTACTTAGAAACTTTTCAATGGATGACATATTGC AGTATAATATtccaaaattattgaaaacCTATTTAGAGAATAATATTTTT TACCTCTgattatgaaatgttttatTAACGTTTGTTTGTCTGTTTCATTC TACTGTTCTGTGtgttttaatgtttatttttcatgttgttttttattttt ccattatCTGTGCGTTGTAtctgttcttctttttcaacTAGTGTGTACCG AATTAGA Run BLAST on NCBI transcript from alignment at sc0000012:204669..207625- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001924 ID=TCONS_00001924|Name=TCONS_00001924|organism=Clytia hemisphaerica|type=transcript|length=2957bp|location=Sequence derived from alignment at sc0000012:204669..207625- (Clytia hemisphaerica) AAAACATTGCTGTAGTCTTTAAACAACTTTGCCAACCTATAATGAAGCTC
AGATCGGCATTGCCGATCTAAAAACAAGTCTAGGTTGGCAGAATTTTCAC
GATTTGCTTCTACTTGAAATTCAAGGGCTGAGTTTTAGCCTCAAAACAAT
TGACACAAGTTAACTAATGATGAGGCAGTGCAGAGAGGTGGTTCTCTTGT
AAATTAGACTTTAACTCTAATGTAGGTACTGAAAGAAAATGCAAGGTTTG
AACACAAATATCCAGGCATTCAAAGACAGCCCATTATTTTCAACATTTTT
ACCCAAGTCTACCAAAGATCAGAGTCAAAATTATGGTCAAGATAAGAAGA
CAGAACATTATAATGCATCATCTTGTTTGCCACTCGATGCTTCATTTGAA
TTTGATCAATTTTTCAATACCCACGTGTTCACTTCTGGACTGACGGACAA
TGGTAAAACTTTGGCCATCTTTGAACAAGATGATAAAGGAAATTTAAACA
TGCATAAATATTGCTATCATAAAGGCCAGATTGNTTAACATTTCTGAAGG
TTTTTTGGATTAGTTTTCAGCCCTCGAATTTCAGGTCAGCATTATGCAGT
GCAGACCTAAAAGCCAACCAAAGAATGTGTATGATTGGCAGTTCATTGCC
GACCATAATCATCAATTCTTTTGGCAGCAGACCATAAGTGATAATTGAAA
AAAAAACATTGCTGTAGTCTTTAAACAACTTTGCCAACCTATAATGAAGC
TCAGATCGGCATTGCCGATCTAAAAACAAGTCTAGGTTGGCAGAATTTTC
ACGATTTGCTTCTACTTGAAATTCAAGGGCTGAGTTTTAGCCTCAAAACA
ATTGACACAAGTTAACTAATGATGAGGCAGTGCAGAGAGGTGGTTCTCTT
GTAAATTAGACTTTAACTCTAATGTAGGTACTGAAAGAAAATGCAAGGTT
TGAACACAAATATCCAGGCATTCAAAGACAGCCCATTATTTTCAACATTT
TTACCCAAGTCTACCAAAGATCAGAGTCAAAATTATGGTCAAGATAAGAA
GACAGAACATTATAATGCATCATCTTGTTTGCCACTCGATGCTTCATTTG
AATTTGATCAATTTTTCAATACCCACGTGTTCACTTCTGGACTGATGGAC
AATGGTAAAACTTTGGCCATCTTTGAACAAGATGATAAAGGAAATTTAAA
CATGCATAAATATTGCTATCATAAAGGCCAGATTCAAAGTCTTCATTCCA
GACACTTTAACACATGGTTGATTCGAGATTATGATTATCTTGTCAGTTAT
GATGGCTTATTTGTTGTAATGTTTAATTCTGAAGAACTTGCACATGAAAG
AGACCATCGAAGGAGACGAAAACGTGGCTATGGCCTGGGAGAGAAAGTTT
ACATTTCTTTGCTAGTTTATGACCATGATTTTGAAAATGGTCGAAGTGCA
ATGGGGAAATTTTTCCCGAATTCCTTTGTACTTACCATGTCTGACAAGGA
TGATTCATTGTTTTGGAAATATAAACATGGATATGCTATTGGGGTTGATG
GCACCATAATTGTCTCCTCATGGGGCGTGACTAGAGACACTTTAGATGAA
CAAGATACGGGTGGGACTGCTTTATATTTGAATTATTTCAAAGTTCAACA
AACAAGCTCTAAAATTGCTGTCAAACATTGTGGTTTTACAGATTTGAGTG
GTGCGTTGACTGGCAAACCGTTACCAACAGCTTTCAACGATCCTGAACAN
GAAAGAGACCATCGAAGGAGACGAAAACGTGGCTATGGCCTGGGAGAGAA
AGTTTACATTTCTTTGCTAGTTTATGACCATGATTTTGAAAATGGTCGAA
GTGCAATGGGGAAATTTTTCCCTAATTCCTTTGTACTTACCATGTCTGAC
AAGGATGATTCATTGTTTTGGAAATATAAACATGGATATGCTATTGGCGT
TGATGGCACCATAATTGTCTCCTCGTGGGGCGTGACTAGAGACACTTTAG
ATGAACAAGATACGGGTGGGACTGCTTTATATTTGAATTATTTCAAAGTT
CAACAAACAAGCTCTAAAATTGCTGTCAAACATTGTGGTTGTACAGATTT
GAGTGGTGCGTTGACTGGCAAACCGTTACCAACAGCTTTCAACGATCCTG
CTATTGTATGCAACCAAAACATTACTAAAGTCTTCTTTTTGAGTCATAAT
ATGGTTTACAACGTGATGACGCACTCAATGAGTACATTATCCGAACAAGC
TTTCCAACATAATGTATGGGTTATTCATAGACGGTACGGTGAAATACTGA
TAACCATAGACAGGCCAACTTTCTCGCTACTCAATGTCAAAATATTCAAA
GAGAACGACAAAGGCGAGTATGATCTAGTAAACAAATTCAAAACAAGTCG
AATTATAAGACCAAATGATAATTTTATGGAAGAGCCTACAATGCATTGTC
ATGGTATAAACAATGGAGAGACTCGACTATTTGTAGAACCAACTCAATCA
TCACGCACGATCTTTGCTGTCAATCCGTTCACTTTAAACATTGATTTCAT
TTTGGGCATTCCTGCAAAGCTTGAGGAACCATTTGTGCGTAAAGTCCTTC
AGAGTGGTGATGAAATTACAGTCCTTGTTACCAGTAATTCTGCTGAGTAT
CTGGTCTCTTATAACATTAACAAATGCACTGAACTGAAAAGTCTCAAGGA
GCTTTCAGCTTTGGTGGTACTTAGAAACTTTTCAATGGATGACATATTGC
AGTATAATATTCCAAAATTATTGAAAACCTATTTAGAGAATAATATTTTT
TACCTCTGATTATGAAATGTTTTATTAACGTTTGTTTGTCTGTTTCATTC
TACTGTTCTGTGTGTTTTAATGTTTATTTTTCATGTTGTTTTTTATTTTT
CCATTATCTGTGCGTTGTATCTGTTCTTCTTTTTCAACTAGTGTGTACCG
AATTAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00001924-exon-sc0000012-1575043694:204669..207625 | TCONS_00001924-exon-sc0000012-1575043694:204669..207625 | Clytia hemisphaerica | exon |
TCONS_00001924-exon-sc0000012-1510915933:204669..207625 | TCONS_00001924-exon-sc0000012-1510915933:204669..207625 | Clytia hemisphaerica | exon |
TCONS_00001924-exon-sc0000012-1491911889:204669..207625 | TCONS_00001924-exon-sc0000012-1491911889:204669..207625 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000012 | supercontig | sc0000012:204669..207625 - |
Blast
The following BLAST results are available for this feature:
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