TCONS_00001864 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001864
Unique NameTCONS_00001864
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2377

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001864 ID=TCONS_00001864|Name=TCONS_00001864|organism=Clytia hemisphaerica|type=transcript|length=2377bp
gatagAGTTgttagggtcgataagatcgataaaagatcgatgatagatcg
atgatagatcgataaataatcataagcttaaaaaaatcttgagtaccgta
agttggtctaatctcgacatccgtcttctaatttcgacacccttctttaa
agataggaataGTATGAAAGTCGGAAtcggtgattgaaaaaagatttatc
ctcccttaccactaagcaaataaaataatttcgacctttttttaattttt
cagctctagaaaagggtgtcgaatttagaggagggatgtcgacattagac
caagttacggtatcgatcctctatcgatctcctatccggatcgataagta
atccatcgatcacatatcgatccgtcatcgagccgttccgatgatcgatc
ctatcgagcgcgggggtctggcaCATagcatggcatgggttgacctgggc
gaaggttcattcacttgtcaagtgaaccgctgcgagtggaaATCAAACCT
CAGTCgtctgtgcagcaaccaagctCAATGACTACACTATACCACGCTGT
CTAATAAATATAGCATGGTAGCCCCTAGGAAATCTTTAAAAACAGACCTC
CCTTCCCTTCTTGAAAAGTGTGTCAATTATCACTACTGCTTAATTTAGGT
AAGGTTTTAAAAAGAGTAGAGTCTGTGTCGCATGcaaataaaaacattct
ttTAGTTATCAGTCATAtgccagtttgcagagtatggcaagAAGGCTGCA
CTCGAAGAAAAATTCGTTCCGCACTCGAAGAACGCACCTGATATAAATCC
GGACAAGGTGCATCTATAGCTcggaaatttgcccaaaaaggcaaaaaatt
gctcaaattggCTGCACTAGAGGAAAAGATAGCTGAACACTACACCTGAA
AACCTTAGATATATTTTGCACCTGCACTCGATTTTTTACAAGTTGTGCAC
TCAATATCTCAAGCAAATGTGCCACACTTTGCAAACTGGGTCATATGTAG
GCTTCAAGAAAAGGTATTAATTCAAATCCCTGAACACAGAAAGATTTAGA
CTGATGTTGGAATTGCCAGAGTTTACAAACAANCAAGCAAATGTGCCACA
CTTTGCAAACTGGGTCATATGTAGGCTTCAAGAAAAGGTATTAATTCAAA
TCCCTGAACACAGAAAGATTTAGACTGATGTTGGAATCGCCAGAGTTTAC
AAACAAACACCGAAGTCCTTTCCTGTTCAGGCAGATGGACTTTTTTAGTG
AATAAACTCTACGAGATTTAAACTCAGAAGAAGCAGATTATGCATAGTAT
TGGGTCACTGTGGATATACATGAGCAGAGGGGCGAATCAAACAGACTTTA
TCGACAAACAAACATGAACTGTCTACAGAAAACACTCATACCATTTGACG
GTTTGGAGATGTTCACACTTTGAGTCTCTTTTCAAAATGATGGCCTTTCG
ATATTCAAGAAGTTCAGATTCGCCGCTTTTGAGACCTTTGACCAATCAAT
TTGAAGCGGCCGAAGTCTAAGCCAATCAGAAGTTAGATAACAAGCCTCGT
TTTCGAACCAAATTCGTGCAGTAGCTACAGGGACTCAATCACGTCAACAC
GTCAATCCGAAGGCAAAAGTTTGGTGGAAGGTTCACAAAAATGGAATTCT
TTTTCACATTACCTTTCCAATTTTTGGAGCCACCAAATTTGAAGATTAAG
AAGCCAACATGGATCAAAGCTCCATCTGCAATGTTTGTTTTTTCATGCGT
TTTGTTGTCGTATTTCTTAGTTACAGGAGGTATTATTTATGATGTTATTG
TGGAACCACCAAGTATTGGCTCAACTACAGATGAACATGGAAATAGTAAA
CCGGTTGCTTTCATGCCGTACAGAGTGAATGGACAATACATTATGGAGGG
ATTAGCAGCTAGCTTCCTGTTCACTGTGGGTGGATTAGGTTACATCATCA
TTGATAAAGCAAATGGTCCAGGATTACCAAAGTTGAACAGATTCCTTCTC
TTGTTCTTTGGATTCTTATGCGTTGTCGTTCCTTTCTTCATGTGTAGGCT
ATTCATGAGAATGAAATTACCTGGATACCTGAGCGCACATTAAAGTCATC
GATCAATTAGCAGttgtaattaactttttttcattGTAATTTTTAGGGAA
TACCTTTTTGTATGAAAATGTTTACACTTGATTCGAAACACACTTTTCAT
TTGATTAACTTTCCTGCGTCAATTTTAGATACTATAATCCCTGACACTTT
TCGATTTATGTCCAAAGCTCCCTGAAAACGGTGTCAATCATTTCGAGTTC
GTGAAAAAgtcacttttttgagaaaattgtttTTCATATTAAAACTTTAG
ATCgacaaaatctaattttgtATTGTG
Run BLAST on NCBI

protein sequence of TCONS_00001864-protein

>TCONS_00001864-protein ID=TCONS_00001864-protein|Name=TCONS_00001864-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
MEFFFTLPFQFLEPPNLKIKKPTWIKAPSAMFVFSCVLLSYFLVTGGIIY
DVIVEPPSIGSTTDEHGNSKPVAFMPYRVNGQYIMEGLAASFLFTVGGLG
YIIIDKANGPGLPKLNRFLLLFFGFLCVVVPFFMCRLFMRMKLPGYLSAH
Run BLAST on NCBI

transcript from alignment at sc0000012:1930..8470-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001864 ID=TCONS_00001864|Name=TCONS_00001864|organism=Clytia hemisphaerica|type=transcript|length=6541bp|location=Sequence derived from alignment at sc0000012:1930..8470- (Clytia hemisphaerica)
GATAGAGTTGTTAGGGTCGATAAGATCGATAAAAGATCGATGATAGATCG
ATGATAGATCGATAAATAATCATAAGCTTAAAAAAATCTTGAGTACCGTA
AGTTGGTCTAATCTCGACATCCGTCTTCTAATTTCGACACCCTTCTTTAA
AGATAGGAATAGTATGAAAGTCGGAATCGGTGATTGAAAAAAGATTTATC
CTCCCTTACCACTAAGCAAATAAAATAATTTCGACCTTTTTTTAATTTTT
CAGCTCTAGAAAAGGGTGTCGAATTTAGAGGAGGGATGTCGACATTAGAC
CAAGTTACGGTATCGATCCTCTATCGATCTCCTATCCGGATCGATAAGTA
ATCCATCGATCACATATCGATCCGTCATCGAGCCGTTCCGATGATCGATC
CTATCGAGCGCGGGGGTCTGGCACATAGCATGGCATGGGTTGACCTGGGC
GAAGGTTCATTCACTTGTCAAGTGAACCGCTGCGAGTGGAAATCAAACCT
CAGTCGTCTGTGCAGCAACCAAGCTCAATGACTACACTATACCACGCTGT
CTAATAAATATAGCATGGTAGCCCCTAGGAAATCTTTAAAAACAGACCTC
CCTTCCCTTCTTGAAAAGTGTGTCAATTATCACTACTGCTTAATTTAGGT
AAGGTTTTAAAAAGAGTAGAGTCTGTGTCGCATGCAAATAAAAACATTCT
TTTAGTTATCAGTCATATGCCAGTTTGCAGAGTATGGCAAGAAGGCTGCA
CTCGAAGAAAAATTCGTTCCGCACTCGAAGAACGCACCTGATATAAATCC
GGACAAGGTGCATCTATAGCTCGGAAATTTGCCCAAAAAGGCAAAAAATT
GCTCAAATTGGCTGCACTAGAGGAAAAGATAGCTGAACACTACACCTGAA
AACCTTAGATATATTTTGCACCTGCACTCGATTTTTTACAAGTTGTGCAC
TCAATATCTCAAGCAAATGTGCCACACTTTGCAAACTGGGTCATATGTAG
GCTTCAAGAAAAGGTATTAATTCAAATCCCTGAACACAGAAAGATTTAGA
CTGATGTTGGAATTGCCAGAGTTTACAAACAANCAAGCAAATGTGCCACA
CTTTGCAAACTGGGTCATATGTAGGCTTCAAGAAAAGGTATTAATTCAAA
TCCCTGAACACAGAAAGATTTAGACTGATGTTGGAATCGCCAGAGTTTAC
AAACAAACACCGAAGTCCTTTCCTGTTCAGGCAGATGGACTTTTTTAGTG
AATAAACTCTACGAGATTTAAACTCAGAAGAAGCAGATTATGCATAGTAT
TGGGTCACTGTGGATATACATGAGCAGAGGGGCGAATCAAACAGACTTTA
TCGACAAACAAACATGAACTGTCTACAGAAAACACTCATACCATTTGACG
GTTTGGAGATGTTCACACTTTGAGTCTCTTTTCAAAATGATGGCCTTTCG
ATATTCAAGAAGTTCAGATTCGCCGCTTTTGAGACCTTTGACCAATCAAT
TTGAAGCGGCCGAAGTCTAAGCCAATCAGAAGTTAGATAACAAGCCTCGT
TTTCGAACCAAATTCGTGCAGTAGCTACAGGGACTCAATCACGTCAACAC
GTCAATCCGAAGGCAAAAGTTTGGTGGAAGGTTCACAAAAATGGAATTCT
TTTTCACATTACCTTTCCAATTTTTGGAGCCACCAAATTTGAAGATTAAG
AAGCCAACATGGATCAAAGCTCCATCTGCAATGTTTGTTTTTTCATGCGT
TTTGTTGTCGTATTTCTTAGTTACAGGAGGTAAAGTTTTGTAACCTTTTT
TTAATTCTTTTTTTTTGGGATAAAAACAATTTCAAAACATGCGAGTGGCC
TGAAAAAGTTGGTGCTATACCTAGGGTCGTCTTTATTGGGTCGATATTAG
ACCAACTTACGGTACTAATTGAACGTTCGATTGTGAAGGAAGTAATCAAT
AATGATCGATAATAATCGAAGGTGGTCAGTGACACCCCCTATCCAATTTT
ATCGGTGATTGAATACTCAGGCCAGGCCCAATTGATTGTTTGGTTCGTGT
CCTAGAAGCTCTGAAAAATGGGTCGGTCGGTCGGTAGCTAAAATTGGAAC
CTTTTTTTCATTTTCCCACCAAAAACCTCTATTTTTGAAATTCCTCAAAC
AATCGTGCAATCCTGGAATCCAAACGCGAGTGTAAAAAAATAGTCAAAAG
CCCGGATCCACAACGGCACTCGACGCGATCGCAAGATAGGTTCTAGTTGG
AAATAAAGGCGTTTGCGGCGTGTGCTTAAAGGAATACAGCTGTGAGTTTC
TGCTACACCGGGACATTTTCTGTGCGCAAATTGGATGTTGTTTATAGAAG
AATCAAAGCAGTCAGTTAGAAAAGAACTGCAGAGATAGTAGTTATCATGT
GAAAAGGAGGTAAATTTGTTTTGATTTTTCCAACTCAAAGTGAAACACTT
TTTCTCAAAAATTTAGAGTCGGTCGGAGGACACGAACCAAACTATCAATT
GGGCTTGGCCTCACTCGACTCCAGATTATGGCATTTTCTTCGACCATTTT
CGATTTGTTCAATCATTTCGATTACCTTCAATCATATTGAATACCTTCGA
TTGTACTCAGTAATTTCCAGCCTTCAATTTTATCAAATATGTTTCCAGTA
GCACTTGAGGAAACCCAGGGCGAAGGCCACACAAAATGGCAAGGGAAAAT
GGCTGGGAAATAAGGGGGTCAATCTTTATGGAGGGGCTTCTTTTTGTGCT
TTGGTTTTAGATCAGTTTTTTTAGTTTTTCTTAAAGATATATCATAATAC
CATCAACTGCTCTAACTTGGGATGATTGGTCGAAACATGGTGGGACTGTT
TGATATCTGGCCTGTATTTTCACTTACTGTTAAATGTCTTTGACAACAAA
TTCGTTTTGATAATTCTACCAAGTTTATTAACATGTCACCATACTAACTT
TCACTGATAGTGTGTCCTTTGTAACTTTTTGTTTTCATTCCAAATGACGG
GACGTCGTTTGGAGAATTACAGAACGCCTAACCGTCTAGTGCCTGATGGG
GTTAACAAATAACGAGTGTGTAACTTGCAGCGGGAGTGACGTTAAACGCT
CCATCGTTTTGCCACTAATATGGTCTTCTTCGTTCCAGACATTTGCGTGT
GTTCCACTATGGATTTTTTCATATTTCGATTTAAAAGCCTACTCGGTGCA
AAAGAGAAATCTTTTATTTTTTTATATATATGCCATTTATTAACTCAAAT
CAAATGACTTTGGAGGTTCGGTGAAATGGTGGCCGGATTGCCGTCCCATT
TTTTGTCAGATAGTCCCAAGTTAGAGCAGTTGACGGTAATTGGTTATCGT
CAAAGTAATCAATTGGTTAGCAAAGTTGTCAAAGTTATCGAAAGTAATCA
ATAACAATCAAAGTACTCGGACGGTTATGGAGTCTTTGAAGGGTTGTTAA
GAAAGTGATCGAATACTCACAATTTTTCTGAAATTTTGGTACTTGACATT
CGATTGTTAATCGATAAGTGGTTGTTTGATTACTTCCATCATTATTGATT
ACTTCGACAATCAAATTTATCGTTCAGTACCGTCTGGTCTAATATCAACA
TCCCTCATCTAATTCTGACACCCTTCTTTAGAGACAGACAATAATAATAC
TCCTCTCTGACCACTAAGCAAAGAAAAACAGTTTAAACCTTTCTATCAAT
TTCAGCTGATAAAAAGGGTGTCAAAATTAGAGGAGGGATGTTGACATTAA
ACCAAGTTAGGGTAATCCCATTAATTTCTAAAATATGGCTAATGGTCATG
ATTCATTTAACTTTACACATTTCTTTCATAGAAGTACCAGCAATTCAAGC
TCTTTTTCTACAAATTTTGAGCAACTTTTAGGCATGAGAAGATCAAATAT
CTCAGGGCTGAACCCCCACAAGGCCCCTAGACCTGTTTGGGGGGATTACA
GCACCAGGACCCTCCGAGCGCTCCGGAAACGTCTGGAGCAAAAAGTGCTG
TTTTTCCGGAGCACAATTTTTGGTGATTGGTCTCTGCACCAGAACTATGT
CGACATCCCTCATCTAATGGAGGGGGTTTATATTGTATCCAATAAGTAAC
ATACCTGCTGCCTAACCTCAGTCGAGCAAAGAGAAAACCTTCAAAGATTC
GATTTAAAGGCATTTTGACCCTAATTAAATTACTTTCTCCAGCCTTTTTA
GAAAATTAACTCAATCTATCTTAAAGTTCATTAATACAGCTGGGGAAGTC
AAAAATCATTGCCCCCAAATATATTAAATCAAATTAAAAAACAAGATTCA
TACGTATACTTTTTTGGCTCACCCGGTATAACAAAATAAGGGTGAATAAA
TCTGAAAATATTCCTTTAATAAGGTAGATGGAATTCATGATGGGTAATTA
AAAACTTGTGCTCACTTATAATAATTATACATTAATATGACATTGTTTTT
TGTGCTGGAGTTTTTAATTATCCAACATGACACCACGTCTAGGGAAAGGT
CTATTTATCACAATACATTGAAGGGTCTGTTCAAAAATCTCAGACATCAC
AATAGTACCAATAGTACTAGAAAAGTTTAGGTGGTATAGTTTTAGCTCAA
TAGAATGTCAATTGCTGAAGTCAGTGAAATCAGTCAAATTTAACCTTGTT
TTGCTTCTTGTTTAGGTATTATTTATGATGTTATTGTGGAACCACCAAGT
ATTGGCTCAACTACAGATGAACATGGAAATAGTAAACCGGTAAATAATAC
ACCTATTAACCCTTTTAACAACTGGTGTCGAAATGACGTCAAAATTCTGC
GTCATTAAGCATTTCAATGCAATACCTTCAGAGATTCTCTTCCTAGTAAA
TTGGAACCAAGTCTTTTCTGGGCCAGGGATTTTTTTATTGTTTTTATGTC
AAAGAATTTCAGAGATATGCTTAACATGACCAAAAGGATTGGTTAAAAAA
AACGCAAGTTCTTAGTTCTGAGTTGAAGATTTTAACAGTTTCCCAGAGTA
CATGTATTCCACTCTTGAACTGACTCATCAGTTGTTCACTTTTTGTTCTG
ACTTAAAATCGAGCTGTCTACAAGAAAATATTTTCACCATAAAATATTCT
TTATGTCACTAAAAAAGGATTGATTTTGATTTAATTTCATAAGAGATCAT
GNAAAATATTCTTTATGTCACTAAAAAAAGATTGATTTTGATTTAATTTC
ATAAGAGATCATGTATACCTAGGGTTTTCGTAAACTGTAAACTTTATCTA
TGGTTTACGAGTAGANCAAATATTCTTTATGTCACTAAAAAAGATTGATT
TTGATTTAATTTCATAAGAGATCATGTATACCTAGGGTTTTCGTAAACTG
TAAACTTTATCTATGGTTTACGAGTAGAAATTACCCAAATGGAAAATCAC
TTTTAAAATGTCGTTAGCTATAATAAATGGCTTGAATTCAATTAGAATTC
CAGAGATTTCTCATAACACTTTAATAAAAAGATTTTTGAAAATTATTGAT
TGGCTTTTATTTGTAACAGGTTGCTTTCATGCCGTACAGAGTGAATGGAC
AATACATTATGGAGGGATTAGCAGCTAGCTTCCTGTTCACTGTGGGTGGA
TTAGGTTACATCATCATTGATAAAGCAAATGGTCCAGGATTACCAAAGTT
GAACAGATTCCTTCTCTTGTTCTTTGGATTCTTATGCGTTGTCGTTCCTT
TCTTCATGTGTAGGCTATTCATGAGAATGAAATTACCGTAAGTTTTCGGC
AATTTTCATTATTATCTGCATAACTCTCTTAGAGCTTGCATTTTTTTTAC
CTTATTTGCGCAGACGAAAGTTTTTTAATTGACCTGGCTCTCGAACAGTA
TATGAAAGTTAGAATTCTTTTGCGCATTTATTCTGTTTAATACCAACCAA
CCATGATAACTTGAATGTTATAGGGCTCATAGTGAAGTTATCTGAGCTTT
AGGATGTTCTTAAATTTCTGGGTTTTGATCTTAAGAATATTCTTAGCCTT
TTCTTATTTTTATTATGTGATTCTTTTTGTGCAATTACCTGAAAAATGAA
GCTTGACAAGCCCTACTATTTTTTTTTCTTAATATTGTTATTTAGTTTGT
TTTCATAAAAAGTGTAGTTTTAAAGAAAATATGAATTGAATTCTCGTACC
CATTATTAACAGTGCGATGGATGCTAATAGTATGCATCATTGTTAAAAAC
CTATTCAATTTTTTTATTTCTCTTCCTTTTTTTAGTGGATACCTGAGCGC
ACATTAAAGTCATCGATCAATTAGCAGTTGTAATTAACTTTTTTTCATTG
TAATTTTTAGGGAATACCTTTTTGTATGAAAATGTTTACACTTGATTCGA
AACACACTTTTCATTTGATTAACTTTCCTGCGTCAATTTTAGATACTATA
ATCCCTGACACTTTTCGATTTATGTCCAAAGCTCCCTGAAAACGGTGTCA
ATCATTTCGAGTTCGTGAAAAAGTCACTTTTTTGAGAAAATTGTTTTTCA
TATTAAAACTTTAGATCGACAAAATCTAATTTTGTATTGTG

Coding sequence (CDS) from alignment at sc0000012:1930..8470-

>TCONS_00001864 ID=TCONS_00001864|Name=TCONS_00001864|organism=Clytia hemisphaerica|type=CDS|length=1812bp|location=Sequence derived from alignment at sc0000012:1930..8470- (Clytia hemisphaerica)
TGGATACCTGAGCGCACATTAAGTTGCTTTCATGCCGTACAGAGTGAATG
GACAATACATTATGGAGGGATTAGCAGCTAGCTTCCTGTTCACTGTGGGT
GGATTAGGTTACATCATCATTGATAAAGCAAATGGTCCAGGATTACCAAA
GTTGAACAGATTCCTTCTCTTGTTCTTTGGATTCTTATGCGTTGTCGTTC
CTTTCTTCATGTGTAGGCTATTCATGAGAATGAAATTACCGTATTATTTA
TGATGTTATTGTGGAACCACCAAGTATTGGCTCAACTACAGATGAACATG
GAAATAGTAAACCGATGGAATTCTTTTTCACATTACCTTTCCAATTTTTG
GAGCCACCAAATTTGAAGATTAAGAAGCCAACATGGATCAAAGCTCCATC
TGCAATGTTTGTTTTTTCATGCGTTTTGTTGTCGTATTTCTTAGTTACAG
GAGTGGATACCTGAGCGCACATTAAGTTGCTTTCATGCCGTACAGAGTGA
ATGGACAATACATTATGGAGGGATTAGCAGCTAGCTTCCTGTTCACTGTG
GGTGGATTAGGTTACATCATCATTGATAAAGCAAATGGTCCAGGATTACC
AAAGTTGAACAGATTCCTTCTCTTGTTCTTTGGATTCTTATGCGTTGTCG
TTCCTTTCTTCATGTGTAGGCTATTCATGAGAATGAAATTACCGTATTAT
TTATGATGTTATTGTGGAACCACCAAGTATTGGCTCAACTACAGATGAAC
ATGGAAATAGTAAACCGATGGAATTCTTTTTCACATTACCTTTCCAATTT
TTGGAGCCACCAAATTTGAAGATTAAGAAGCCAACATGGATCAAAGCTCC
ATCTGCAATGTTTGTTTTTTCATGCGTTTTGTTGTCGTATTTCTTAGTTA
CAGGAGTGGATACCTGAGCGCACATTAAGTTGCTTTCATGCCGTACAGAG
TGAATGGACAATACATTATGGAGGGATTAGCAGCTAGCTTCCTGTTCACT
GTGGGTGGATTAGGTTACATCATCATTGATAAAGCAAATGGTCCAGGATT
ACCAAAGTTGAACAGATTCCTTCTCTTGTTCTTTGGATTCTTATGCGTTG
TCGTTCCTTTCTTCATGTGTAGGCTATTCATGAGAATGAAATTACCGTAT
TATTTATGATGTTATTGTGGAACCACCAAGTATTGGCTCAACTACAGATG
AACATGGAAATAGTAAACCGATGGAATTCTTTTTCACATTACCTTTCCAA
TTTTTGGAGCCACCAAATTTGAAGATTAAGAAGCCAACATGGATCAAAGC
TCCATCTGCAATGTTTGTTTTTTCATGCGTTTTGTTGTCGTATTTCTTAG
TTACAGGAGTGGATACCTGAGCGCACATTAAGTTGCTTTCATGCCGTACA
GAGTGAATGGACAATACATTATGGAGGGATTAGCAGCTAGCTTCCTGTTC
ACTGTGGGTGGATTAGGTTACATCATCATTGATAAAGCAAATGGTCCAGG
ATTACCAAAGTTGAACAGATTCCTTCTCTTGTTCTTTGGATTCTTATGCG
TTGTCGTTCCTTTCTTCATGTGTAGGCTATTCATGAGAATGAAATTACCG
TATTATTTATGATGTTATTGTGGAACCACCAAGTATTGGCTCAACTACAG
ATGAACATGGAAATAGTAAACCGATGGAATTCTTTTTCACATTACCTTTC
CAATTTTTGGAGCCACCAAATTTGAAGATTAAGAAGCCAACATGGATCAA
AGCTCCATCTGCAATGTTTGTTTTTTCATGCGTTTTGTTGTCGTATTTCT
TAGTTACAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000984XLOC_000984Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001864-exon-sc0000012-1575043694:6692..8470TCONS_00001864-exon-sc0000012-1575043694:6692..8470Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1575043694:3732..3805TCONS_00001864-exon-sc0000012-1575043694:3732..3805Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1575043694:2734..2951TCONS_00001864-exon-sc0000012-1575043694:2734..2951Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1575043694:1930..2235TCONS_00001864-exon-sc0000012-1575043694:1930..2235Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1510915933:6692..8470TCONS_00001864-exon-sc0000012-1510915933:6692..8470Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1510915933:3732..3805TCONS_00001864-exon-sc0000012-1510915933:3732..3805Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1510915933:2734..2951TCONS_00001864-exon-sc0000012-1510915933:2734..2951Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1510915933:1930..2235TCONS_00001864-exon-sc0000012-1510915933:1930..2235Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1491911889:6692..8470TCONS_00001864-exon-sc0000012-1491911889:6692..8470Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1491911889:3732..3805TCONS_00001864-exon-sc0000012-1491911889:3732..3805Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1491911889:2734..2951TCONS_00001864-exon-sc0000012-1491911889:2734..2951Clytia hemisphaericaexon
TCONS_00001864-exon-sc0000012-1491911889:1930..2235TCONS_00001864-exon-sc0000012-1491911889:1930..2235Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001864-proteinTCONS_00001864-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:1930..8470 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
139.128	144.228	124.453	130.439	42.5039	31.8914	101.09	103.4	117.33	107.396	101.469	120.805	79.3934	77.3291	78.4949	81.7769	90.5955	89.9838	40.6678	52.6008	77.6461	71.7813	91.484	82.5807	46.3744	55.0563	62.8252	57.0886	104.838	77.1774
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR021149OligosaccharylTrfase_OST3/OST6
Blast
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BLAST of TCONS_00001864 vs. Swiss-Prot (Human)
Match: OSTC (Oligosaccharyltransferase complex subunit OSTC OS=Homo sapiens GN=OSTC PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.993e-58
Identity = 104/147 (70.75%), Postives = 128/147 (87.07%), Query Frame = 3 
Query: 1641 MEFFFTLPFQFLEPPNLKIKKPTWIKAPSAMFVFSCVLLSYFLVTGGIIYDVIVEPPSIGSTTDEHGNSKPVAFMPYRVNGQYIMEGLAASFLFTVGGLGYIIIDKANGPGLPKLNRXXXXXXXXXXXXXXXXMCRLFMRMKLPGYL 2081
            ME  + +PF  LE PNLK+KKP W+  PSAM V++ V++SYFL+TGGIIYDVIVEPPS+GS TDEHG+ +PVAF+ YRVNGQYIMEGLA+SFLFT+GGLG+II+D++N P +PKLNRFLLLF GF+CV++ FFM R+FMRMKLPGYL
Sbjct:    1 METLYRVPFLVLECPNLKLKKPPWLHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTDEHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147
The following BLAST results are available for this feature:
BLAST of TCONS_00001864 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OSTC2.993e-5870.75Oligosaccharyltransferase complex subunit OSTC OS=... [more]
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