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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001809 ID=TCONS_00001809|Name=TCONS_00001809|organism=Clytia hemisphaerica|type=transcript|length=492bp
TATATTTTGTCTTGTTCAGCATGAACTAAATGCCATGAATTCTTGTCGGT
GTACAATTTGtcgatttctttctttaaacTACACCGATTTGCTagtttgt
ttttaatgaaatgttAGAAAAAAAGTCGTCGAAGCATAATTTCTATTAGA
AGTTCACATGACATTGACCTTGAATCTCTTGAAAATCGCATAAAATTTTA
GTTTCGATTTGTTGTTTTTGCTCAATTTTCTAACTCCTCATAAAATCTCT
CACTTTTGTCACCTCTCACTCTCAAGCAGAATAGACATCACAAAATTGCG
CAAGACTTACCCTAAGACTATTTATCAAATACCATACCAATTAAACAATA
CGTCATTATTTATTCGGCAGTTGCTAGATAAACAGctaccttttttttct
tttgatttcgaTTCCTATACATAATCCGATTTGGGGATAATTCGACCCAC
GTGAGATTTCACGGGGTTAAATCCCCTTTAGtattaattaca Run BLAST on NCBI transcript from alignment at sc0000012:756320..757412+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001809 ID=TCONS_00001809|Name=TCONS_00001809|organism=Clytia hemisphaerica|type=transcript|length=1093bp|location=Sequence derived from alignment at sc0000012:756320..757412+ (Clytia hemisphaerica)
TATATTTTGTCTTGTTCAGCATGAACTAAATGCCATGAATTCTTGTCGGT
GTACAATTTGtcgatttctttctttaaacTACACCGATTTGCTagtttgt
ttttaatgaaatgttAGAAAAAAAGTCGTCGAAGCATAATTTCTATTAGA
AGTTCACATGACATTGACCTTGAATCTCTTGAAAATCGCATAAAATTTTA
GTTTCGATTTGTTGTTTTTGCTCAATTTTCTAACTCCTCATAAAATCTCT
CACTTTTGTCACCTCTCACTCTCAAGCAGAATAGACATCACAAAATTGCG
CAAGACTATTTATCTAAAGTCTTTACTAATACTATTTATCCAATACCATA
CCAATTAAACAATACGTCATTATTTATTCGGCAGTTGCTAGATAAAGATA
AACAGCtaccttttttcttttgatttcgaTTCCTATACATAATCCGATTT
GGGGATAATTCGACCCACGTGAGATTTCACGGGGTTAAATCCCCTTTAGG
TATTAATTACAATAAAGTTAACGGTCTCAACTCTCACGGAGACTTTGCCA
GATCCGGATCTGCTGAATAATAGTTTGAATTTCTGACGGAGAGTGCTGAT
TCTATATAAGGAATATGATATGTAGCGACACTCTCCTTCATAGATTTTTA
AAGACAGCTGAGAAAGATATGATTATGAGTTTGAGCGGAATGGCAGAGCA
CTATCAATTTATTTGATTTATCAACCACCCTACTGATCAACGACAAAAAA
TCGTCAAATTTGTTttatgttaaagaaaagaatcaAGCGAGTGAGCAGGC
TATATTAAAAATATGCGATTTTAAAAATAGCTCGTCTTTTCATTACAACA
GTACATTGTTATCCGAGAGAAGAGGACAACGTCTGTCAACGTCACTATCT
ATTTAANCTACCCTAAGACTATTTATCAAATACCATACCAATTAAACAAT
ACGTCATTATTTATTCGGCAGTTGCTAGATAAACAGctaccttttttttc
ttttgatttcgaTTCCTATACATAATCCGATTTGGGGATAATTCGACCCA
CGTGAGATTTCACGGGGTTAAATCCCCTTTAGtattaattaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001809-exon-sc0000012-1491911889:756320..756626 | TCONS_00001809-exon-sc0000012-1491911889:756320..756626 | Clytia hemisphaerica | exon |
| TCONS_00001809-exon-sc0000012-1510915933:756320..756626 | TCONS_00001809-exon-sc0000012-1510915933:756320..756626 | Clytia hemisphaerica | exon |
| TCONS_00001809-exon-sc0000012-1575043694:756320..756626 | TCONS_00001809-exon-sc0000012-1575043694:756320..756626 | Clytia hemisphaerica | exon |
| TCONS_00001809-exon-sc0000012-1491911889:757228..757412 | TCONS_00001809-exon-sc0000012-1491911889:757228..757412 | Clytia hemisphaerica | exon |
| TCONS_00001809-exon-sc0000012-1510915933:757228..757412 | TCONS_00001809-exon-sc0000012-1510915933:757228..757412 | Clytia hemisphaerica | exon |
| TCONS_00001809-exon-sc0000012-1575043694:757228..757412 | TCONS_00001809-exon-sc0000012-1575043694:757228..757412 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:756320..757412 + |
Blast
The following BLAST results are available for this feature:
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