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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001808 ID=TCONS_00001808|Name=TCONS_00001808|organism=Clytia hemisphaerica|type=transcript|length=1661bp
AACAAGTCGATTCATGCAAAATGTACTTTGATCACACCGTAATTTTTGCC
GAATGGTTAATGCACAAGCTGGAGAGAGGGGAAACACTTATACCAGCATT
GTTGGTAAGCATCAGCTGAAAAACAAGACACGCCCACTTTCGCCAAGACT
TCTGGATGCACTATTAAAACCGTCCCTCAATTTTTGACAAAGGATTCATT
GTGCCAATCTGATGGTGACTGACAAGTAGTAATTTGAAGGGAATTTTGAG
TGCTGGCAACATTTGGTGAAGTACCCACTTTAAACTCTCCCATCGCACCT
CGTTTTATTAtatactttcaaaacaaaacgaCGAAAAGATTTACGAAACA
AAACTTGGAACGTTTTCTGGTACCTTGCAATATTTATTGAATCACTCATC
GCTGGTGATCCAACCAACCCTTACTAGAAAAGACACAGTAAAAATTACAA
GTTATGGCTTGTTCAACAATCTACACTTTACTCATGGTCACTGTCATCTA
CGGATGTATTGTCGAATCACGACCACAGAATTTTGATTTGCTTAACACAG
CCGCTGgaaataaaaatcaagaatGGAAAAATCATAAATCGTACGCATTC
AAATGGGAAGgaGCCTTCTCTTTGGGAGCACCCGAACATTCAAAATGCCC
AATGGTCATGCAACCAGAACATGGCCGCTTTGTGTGCAGCGAAGGGACAC
TTTTGGAACGCAATATGTGTTTAGTTGAATGTCAAATCGGTTTCGAGCAA
GACCAACCACCAGTTGTTTACATCTGTGAAAATGNGCGAAGGAACACTTT
TGGAACGCAATATGTGTTTAGTTGAATGTCAAATCGGTTTCGAGCAAGAC
CAACCACCAGTTGTTTACATCTGTGAAAATGGAAAATGGTTTGATTTGAA
ACTCAACAATATTGATACACCAGAGCCTCGTTGCGTCCCAAAACCAACAC
AAGTTGGACATTTCCCTGAGTAAATTTCTTGAGTCGGAGGAATTCAAGAG
CTTAAAGGAGGCGGAAAAGTgttaacaattttcaaaagcaacaagatttt
ttgaaatgatgcGCCGTCATCTAGTTTCCGGAGAACTGGAACCGACTCTC
TCGCTCGCCTCTCGACCGATGAGTGATAAGATGGAATTTTAAGTACTTTa
ttaaaatttctatcaaacaATAGAGGAGATACTTAAGTGATGCTCCTTGA
AAAATGACTTCGAATGTCTATATGTGTTTACTTGGTTGGTTTTTACATGC
CACCTACTTGGAGTGATCGCTATCACCACCAGAAAAATAAtacaaagatt
ttaattttcaatttgcaGATGATGCGCTGGTTTGAGACCAGTTATTTTGT
TTTGCAGTCACAAAAGAAAACTACAATGACATCAATGTATATAAAATGAC
AAACTTTTATAGAAGattattaaaaacataaatCCTAGTTAAGCTGGCTT
GACCCCATCAATCGGGTTTTCCGAATATCATTTTTTTTGTGAATATGTAT
GATAGAGAGAGTATATattatctaaaaacaaaatattataaatatttatt
tatttattatttcaattattatgaaaaagaaatttaactgaaatatcaaa
tttattaaAGATGAAATTCTGTTTTAAAGATTTAGTTTATAGGAATTAAT
TTAGCAAAgat Run BLAST on NCBI protein sequence of TCONS_00001808-protein >TCONS_00001808-protein ID=TCONS_00001808-protein|Name=TCONS_00001808-protein|organism=Clytia hemisphaerica|type=polypeptide|length=123bp
MACSTIYTLLMVTVIYGCIVESRPQNFDLLNTAAGNKNQEWKNHKSYAFK
WEGAFSLGAPEHSKCPMVMQPEHGRFVCSEGTLLERNMCLVECQIGFEQD
QPPVVYICENXRRNTFGTQYVFS Run BLAST on NCBI transcript from alignment at sc0000012:741634..759462+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001808 ID=TCONS_00001808|Name=TCONS_00001808|organism=Clytia hemisphaerica|type=transcript|length=17829bp|location=Sequence derived from alignment at sc0000012:741634..759462+ (Clytia hemisphaerica)
AACAAGTCGATTCATGCAAAATGTACTTTGATCACACCGTAATTTTTGCC
GAATGGTTAATGCACAAGCTGGAGTAAGGATATCCTAGATCGTTTTTATC
GTATTAGCCCCTTAGTGAAAGAAGTGTTCTCTCTTAACAATTCAAAGCTA
AACAAcgcaaaagaaaggaaaaaatataGCAGTTTCAAAGGTGAAAAGGT
CGTTTTagagtttttaatgatttttggagaaaactTTCCAGAAATTTCTA
GCAATGTCTAATTTTAAAGAACAGAAGGCCGATAATTGCACTCCAATTGA
GAGAGCACGTCATTGTTCTTCTAAACGTACGCCAGAAAGCCAATTACTCT
GGCTGTTTAGACGTCATTTTTTGAAGAACTTTCCCAAAAGCTTGTTCCGC
TAGACAGTAAGTCTACAGTCGTAACAACCTGAGGCTTTTTACCGCCGAAA
CACACCCTTCAATCAAAGCAAGGATTTTTTTGCTGTTGAACTCATCTTGA
GATTACGTCAGTTAGATCCGTTGTATTGATTTCACGTCAGAAAAAAGCCC
ACTCACCAGGCTCAATATCATTGAAATCCATGGATTTTATCCTTAAGCGG
TCATTCTTATCAACTTCTTTTGATGTTGGGCTTGTACTTTAGGTCCTTTT
GATCTTACCGGAAGCACCCTTTTTGCTTAGTGACGTTTTGTTTTTCCGGT
TTGCTCTCCCAAGTTTGACGTACGGAAAAGATTCTTTGGAAATGAAAAcg
taaaactttgttttgaacttCATACTACTACATTGTTCCAGTGACAATAT
TTCCTATAGAATatgtcaactctctctaattcttacctctattattcgaa
tctttctgtaaatcGAACTCAAAAGATTGATCCTGTAAAGTTGTTGAAAA
TACTCTCCGTTACCCGAATCgttctataattcgaagaaagTTCTTCGGTT
CCTTGAAGATCGGATTatagagagtcaactgtatttgcATACAAGAGTCC
TTGAGTCTTCAAAAGTCGATggtctagaaaatgattttaacATGATCGAG
TATAGAGATAACATATAAAAATGGCTATTAAAATTGAACGCTGAATAACG
ATGAATAACTCTAAATAGCAGCCTTTATTTCTATGGGGAAGCTATTTAAC
TACATTAGGGAGATGATAATTTTGTGCTCAGTACACATATTGCAAAATCT
TCCTTGCACGTGTCAAAAATTTATGCTAATGACtacgattttcatttttt
tacgcGCTTCCTTACAATCTAAAACAAATCAGCGAATGCTTATCGGTATG
AGTGATTTTTTTATCGACTCGGTCATCGTTTTTCATTCGTCGTCTTCAGA
ATTGATGCTGAATAgctatttttagctttaaagtCTTATACTTTGACAGC
ATGTTTCACACCTGCAGAATAAAAAAACGGTTTAACCATAATAAAAATGA
CCCTGTTCAGGGCCCACGCAGGCGGGAGGCCCTGCCCTGCCctcccccac
ttttttgcaaagtaagCAAActatggttgcgcctccttagactctatatt
cATTACCCCGCACTTTCAAATTCAAAGCGTGGGCCCTGCTGTCAAAGAAG
TCCACCTGTCGCCCTGTTCGAAGCAGGGTAGGCTATAGTGGTTTTGTTAG
AAAATAGACAACTATTTATTGTGAAGTTATTCATTCTACTCCGTTTCGTT
GTACCTGCACGATTAGAAAGAGATCTTTTTTGCTTTCATAAAAGAATAGA
TGGGTAAAATCCAGGCTCCAATCTCACGTACTTAATCGTTGATTTTAGCA
TAGTAAAAAACGATCACGTATACTGATTTTATTTATTCGGTGGATGATTA
TACTTGCATTTGATAACTTTTGGAAGCGCTCAAAGTCGAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTCTCTT
AACAATTCAAAGCTAAACAAcgcaaaagaaaggaaaaaatataGCAGTTT
CAAAGGTGAAAAGGTCGTTTTagagtttttaatgatttttggagaaaact
TTCCAGAAATTTCTAGCAATGTCTAATTTTAAAGAACAGAAGGCCGATAA
TTGCACTCCAATTGAGAGAGCACGTCATTGTTCTTCTAAACGTACGCCAG
AAAGCCAATTACTCTGGCTGTTTAGACGTCATTTTTTGAAGAACTTTCCC
AAAAGCTTGTTCCGCTAGACAGTAAGTCTACAGTCGTATCAACCTGAGGC
TTTTTACCGCCGAAACACACCCTTCAATCAAAGCAAGGATTTTTTTGCTG
TTGAACTCATCTTGAGATTACGTCACTTAGATCCGTTGTATTGATTTCAC
GTCAGAAAAAAGCCCACTCACCAGGCTCAATATCATTGAAATCCATGGAT
TTTATCTTTAAGCGGTCATTCTTATCAACTTCTTTTGATGTTGGGCTTGT
ACTTTAGGTCCTTTTGATCTTACCGGAAGCACCCTTTTTGCTTAGTGACG
TTTTGTTTTTCCGGTTTGCTCTCCCAAGTTTGACGTACGGAAAAGATTCT
TTGGAAATGAAAAcgtaaaactttgttttgaacttCATACTACTACATTG
TTCCAGTGACAATATTTCCTATAGAATatgtcaactctctctaattctta
cctctattattcgaatctttctgtaaatcGAACTCAAAAGATTGATCCTG
TAAAGTTGTTGAAAATACTCTCCGTTACCCGAATCgttctataattcgaa
gaaagTTCTTCGGTTCCTTGAAGATCGGATTatagagagtcaactgtatt
tgcatacaagagtaaaagcaaaatttcaaaaaggttCGTTCAATGTCCGA
AATTAAGCTACTTATTTGTTTTGTGTTCTAGAGTCCTCGAGAGTATAACA
GTCTTCAAAAGTCGATggtctagaaaatgattttaacATGATAGAGTAGA
GATAACATATAAAAATGGCTATTAAAATTGAACGCTGAATAACGATGAAT
AGTTCTAATTAATAGCAGCCTTTATTTCTAGGGGGAAGCTATTTAACTAC
ATTAGGGAGATGATAATTTTGTACTCAGTACACATATTGCAAAATCCCCC
TTGCACGTGTCAAAAATTTATGCTAATGACtacgattttcatttttttac
gcGCTTCCTTACAATCTAAAACAAATAAGCGAATGCTTATCGGTATGAGT
GATTTTTTTATCGACTCAGTCATCGTTTTTCATTCGTCGTCTTCAAAATT
GATACTGAATAgctatttttagctttaaagtCTTATACTTTGACAGTATG
TTTCACACCTGCAGAATAAAAAAACGGTTTAACCATAATAAAAATGACCC
TGTTCAGGGCCCACGCAGGCGGGAGGCCAGGGGGCCCTGCCCTGCCCTCC
CCCACTTTTTAGCAAAGTAAGCAAActatggttgcgcctccttagactct
atattcATTACCCCGCACTTTCAAATTCAAAGCGTGGGCCCTGCTGTCAA
AGAAGTCCACCTGTCGCACTGTTCGAAGCAGGGTAGGCTATAGTGGTTTT
GTTAGAAAATAGACAACTATTTATTGTGAAGTTATTCATTCTACTCCGTT
TCGTTGTACCTGCACGATTAGAAAGAGATCTTTTTTGCTTTCATAAAAGA
ATAGATGGGTAAAATCCAGGCTCCAATCTCACGTACTTAATCGTTGATTT
TAGCATAGTAAAAAACGATCACGTATACTGATTTTATTTATTCGGTGGAT
GATTATACTTGCATTTGATAACTTTTGGAAGCGCTCAAAGTCGAAAAATG
CCCTTAATTGAACACAGTCCATTTCTTAATCATCATCTCTCTAAATGGAA
TTCCAAGTTCTTGTCACGAATGAAGAATTTGAAATGCTCTTGCATTATTG
CACAATATTAGGAAAATCGTTCTATACTTAGATTCGTTATGAGATGATAC
CTTATCGTTTAGGTAATATTTACCGCCATATTAGCCATATTAGGATGTCT
CTGTTTTGCGTCCAACAGGTCCAAATTTCGTCCTTTGTGgtcaaaaattg
tatttcagGATCCAATTTTCGTCGAAATGTTGTCTGACAAGGTCGAgaaa
actttttcttaaaattgatttttgacaaGGCTCATTTTTTAGAACTCAAG
TGAATTTTCCCAATTAAGTTTGGAGCCCCGAAGGTGgcatcttcaacctt
tctcaagcaagaaaaagtgaagcgtTAAGTTGTTGCCCtgcatttagaaa
ttttgtttgaaaaacacacgGCTCACGTGTTTTGACAATGGGAAATAAAT
GGCTTCTTGAACGGAATGTGGAACCTCCCTTTCAGGaactgtttttaaaa
aatgttgcaTTATTCTAATTTTCCGAGCCATTAAAATGTTGAATTACTAT
TAATTCCCGGTCGTGTTAGCAGCCCCTTAGCAAAAATATCATTCTATTTG
TGCCAAAATTGTTAGTTTCTGGAAAACAGCGTAACTTATCTTTTCTAATC
AACTTTTATTCCAAATAATGATATGACATCTTCTACCCATTCCATCAAAG
ATTCAAAGGCACTTCACTTCTCTTCATTTGCCAGTCTTAATAGTGGGCCC
AGGAACATGCTTCCTTTCTCATGAAAGTTTAGTGTATTGTTAAAGATTAT
TTTGTTACTTTAAGCTGTGTTAAAGGTTTAAGAAGGAACCTTCTAAAAGG
AATAACTGGATGATTTGAGATGAGCCAAAAATTCCGATTTTGTTTAGATA
TTCAAAGCTATAACTTTTAGACTTAGCAAGAAACAATATTTAAAGTTGTC
GAGTTTGGAATAAAATATTAGGCATAATATTGctactcttctgtgcttaa
ttgtaggtggTTGGTACTCTGGGAGAAAAACCATAAAATTGGGGAGAGGG
GGTCAATATTAGTGATTTTGGGGTGATATTCCAAAAaaaccctaggaaaa
tgaaggttttggcatATTTCAGGAAAATCTCATAAATAAAATGACCCCCC
TCATTATAAAATGCTATTGGGGTGTTTTTTTCCGAAGAATTGCAAagtta
accccccccccccccttcaatTATAATCACAGAAGAGTAAGAGGCTTTGC
TCAGGGATAGGAATCTTTAGGCCAGATATCTTAACCCATTTAATTATCTC
TTTGACCTTTAAAATTGGAAAGAATCTATGGTATGACCTAATTCTTTGGG
CTACGTATAGAGAAACGTGGGTGTACATTAGTATGGTTAACAAGCTATCT
GCGTGCACAAATTTTGAATCGTTTGCAAATACTTATGGGCTGTGTAATCG
ATAACTTAGCTGTTTAATGATGTCTGCTAACGTTTCAATCATTGCTGATT
TAATGAGGAAAAAATACCTTTTTGAATTTAATGGATTTGGCTTGAAATCA
AATGACTATGTATTTCAGCTAAAATAGTTCGCTAATTTGTCAAAAAGAAA
TAATCTAATAACCTTGTAAATATCATTGAGGGTAGAAAGTCCATAATCAA
ACTTCCCTAAAACCTTGCCTGGAGATGTTTGGGATTCTAACATAGTCTTT
TGCAGGAAAAGTCTAACTAAAACTAATGactaatttttgtaaaattttta
acaaCTCTTCATCATTCGATTGTTATGTTTAAAAGTGAAATCGATCGATC
GGCTATTCGATGACATCATCATGAACACACGTCATCGAGCATTTCAAATT
GCTTAATTCCAAATTATTATACCATGAAATCTACGGATTAATGATATTAT
AGATGCCAAAGTGTAATTGGAATGCAGGAATGTTAGAACGCTTATTTATA
TTGGTATCATCTGATATGTAGTCCGTTTTCTACCCTCAATGAGAAATTAC
CGAATCAACCTACTTAATACAACCAAAATCAAAGTTTCTCACTTTAAGAC
CTTTTTTACAATAACTAGTGCTCCTATCACCCTTGCACCTGTAACCACAT
GCTTACGTTTTGGAATCAACCGCGAAAATCTATGCCGAGAAAACTGAGTT
CAAGggaagttttttttaaactttttgttaatttacattgAATGCGTCTG
ATTCTCAAAaatagttttgtttttaaagaaaataacttttttgctACATT
AGAACACCTAGAAACTCTTGAAAAGGAACAGTACAGACCTCTCATCATGG
TATGCTCTTTCGTCTGTCTTCTTTTACAAGTGTTCGAAGATTTTGGTTGA
CTTTTTTGACAGAGAAGTTAGTTTATTTTGTGAGTAATATAAAGACCACT
GAGGTTTCTTTCACTATAAACCTCTTACTAAACCGAACCCATTTTTGAGT
TGAAATCATAGAATTTCGAAAGAATGTTGTCAAACAATAAATCGCAAAGC
GAAAAGTCTGATCAACAGTCAGTTCTGCCTCCTTACACAGTAAATGATAA
AcgaattcaaaaaatatacttTTCAAAAAGCCTATTTTTGTTCGTTCTCT
CACTCCGACCCTACCCTACCGCATTGTGATATGATAATATGATGATTGTT
ATGGGGTAatattagtttgtataaactaactATAAATTATCATTAAAACT
ATAAGTTAATGCCATTCAGTATGTGATACTGTCATACCCATTGActtccc
gaagggctagactcgagactcctagatgggaaatgaagccactttgcttc
ccatccagaacgcctgcgcgtggtttttacacaaacgccggattgaaagt
aaaatctatcgctagatttcaggaaatgcagtcctcaaaaacaaaggaac
cactatagatacaatccgtcgtcatcaTTGCGGCGCgtaataagtggctt
cactttttcttgcctgtgaaaggttagagattctactctagcccttcggg
tttcaAACTCAATGGTCATTCCCTACTCTCTTTTAAATTCAGTTTTCTAA
CTTGCTAGACGCTACCGTACAAATTTCTGTTTATCTTTACTTCTCTTCTT
TCATTAAAATTCCATGTTTAGACTAGACTTATTACGTAATAATTTCCGTG
AGCTGAAACGCTGATTCGTGTGATCTTTCATGGATAGGTATAGGTCAGTA
GACTAGGGCATGCAAACGTCGCGTCACGCAAGTCTCGTCTCACTATGGTT
TAGAGTGAAAAGTTTTAGAGACATCACGGATGCTTTGTTGACTCTAAATA
CAAGAAAAACATTCTATTTTAGGCAGCAATAATTGCGAGCAGTTTGCAAA
CTGGTGTTGTTTGAAACAAATTGCTtaattgaaaattgactgatttaaaa
tcattgattttaaagcaCTAAGGGCTAGAGCGAAACCTCTGACTTTTCTC
AAGCAAGATAGGCATAAGTGGCTTCATTCCCCATACATGAGTTTTCTCTG
TAGCCCCTTCGGAGCCTTAAACTCAATGGATTGGATAGCCCGCTTCTTTA
AaactttagcgtgggcggccgccaatccaccATCAGAATTATTGAATAAA
CTTTGATAAAACTCGAGGTAGTGGAAATCCTATGAAAGTAGGCTTGTCGT
CGACTGTCGAAGAGACGGGCGTGATCATTCGCTAGAATTCTACATTCGGT
AGAAACATTTTGTATTTTGCTTGTTAATTTGTAACTTCAATGATGTCATT
CACAATTGACTAAATTTTAGACTTATCGACGAAATGCTGTTCAAAGTCTA
ATCGTCAAAGTTTAATAACAGTTAAACGCTCCTCTATTTCGAGACAGCAC
GGGATAATAACTGAGGTCCCTTTTTCAAACCTTCGTGACCATAAGGCTGA
TACTCCCTAATCCATTTAGTAGGAGGAGTGTTTATACTAAAAGGAAATGA
TCTTTACTTATGTAGGTGGGAAGCATTTTCTCCTTAAAGTAAACATTTAA
AAGGGTTCCATTTTTGACTCGCGTGCCACTGGTAAGGAGCACGCATTTGT
GTAAGCATAGATTTGCTTAATTAATAAGAGATACTGATAAGATACAATCT
ATTTGAGCGAAGTCCACAAGAGTCAAATCCGAAACAGAATACCTTTTCTG
ATGACACTGCACTTTGCTCCAAAAGGGTGTAGCGTTTTTTTTTGTTCCAC
TGGAATTCCAGAgcttcattgaaattttgtcgTCGCCAATTTAGGTGGTC
TGATACATGCATTCATTTTTGTGAAGAAAATCATTGTTTGTCTGGGCACT
TCATAGAAGGGGATTATAATATTTTAGGCTAAGGTTGTTGTAGCTATCAA
GTGAAATAGAATTAAGAAGGAGAGTCACTTAGCATGTTTATTTTATTGAC
GGCTTCATATCTTGGCTCGCCCCGTGGATTATTTCAATCAAAACCCATTT
AAGTAGTTATTGTATTTGGTCGAACAACAAAATTTCAGAATGGAACACAT
CAAGTTTAACATTCAcgagaaaaaaagcaaaatatctCTCCGATTTCTCA
AAGACAGAGTCCTCAGTCTGTTGAGATTTCTCTTTCCAGTAGGGATGATA
TCTCAGAAAACAAGTGCAGACTTTCAAGATTTTGTGTCTTTCCCGCCATC
ATTTTCCATTTTACCACCATTGGTCATTAATTAGTTTAACCATCATTCTA
TAATTAAAGAGAAACTTAACTTGCGATTGAAATCACTTCTGTATATCAAC
GCCCACTCGATAAACAGTTTGAAGACTTCGAAGAGGATACTTTCGACATC
AGACATGCTCGTGTGAAGTTGTCTATAAAGCAGATAAAACTGTCAACTCC
TTCTTGTTTGTGAGAGGAGGAGAGGGTAAAGTGAGAGCTGCTTTCCGAGT
CGCAATCGGATACTATGTAAGGTCTGGGGATGTTTGGAGGGAAAAtcctg
attttatttttaactttAATCCAACAAACAATTCTTAAGATATTTTTTCC
CTTTCGTCAGGTCGTTCAAGgtcacaaaataaaattcaCTAGAATACGGA
TTGTTTAATTGAACATTTGAATGcacttatttcaatttttcaagttcTCA
AGTAATTTCTTAAGAGCTCGTAGTGTATTTTGAGATCGAGGCCCTCGTAT
TTATACCACGtacacttttttgcttttttctatCAAGCATCTTAGATTCA
ATTTAGTCTGTATTTTTTGgacttcagtttaacaatcataatgttaaaat
ctttaaaacatttttaaagatttagCCAAAATTCTCCTCTACAAATTTTA
TTAGTAATTGCATATAATTCGTTGAAGAGAGAGCTACCTTACCAGACAGT
CTATTTTTTGTTGGGTCTCAGACTAAAATAATAAGGGTGGGAGAGATGAG
ACAGTTAGATAAGGCAAATATTTTTACCACTGCTTTCTAAAATTAGTTGc
caaacaagttttatggttaTATTCAAGTTATTTTACTAAACGATTCCTAT
CTCTTGATTTTTCTATTGTAAGTGGTCTAGATAGAAAGCCCTTTTTCCAG
TCTTTTGGATTTATTTGCATTTCGCAACGTATCTTGTAGCTGCTGGTAGA
AAAACAAACCACACCAGCTGCTTCAATcctaaaccaaaatttgtcTAATT
TCCTTATTTGCTTTTAAGGATggtaaatttgaatttcgaaatcTATTTTA
CTcaagaaattgataaaaatctaGTATAAAAAGCCTGTAGATTCGTATTT
TTAGTATACTAAAAATCTACTTCATTTACAGGAGAGGGGAAACACTTATA
CCAGCATTGTTGGTAAGCATCAGCTGAAAAACAAGACACGCCCACTTTCG
CCAAGACTTCTGGATGCACTATTAAAACCGTCCCTCAATTTTTGACAAAG
GATTCATTGTGCCAATCTGATGGTGACTGACAAGTAGTAATTTGAAGGGA
ATTTTGAGTGCTGGCAACATTTGGTGAAGTACCCACTTTAAACTCTCCCA
TCGCACCTCGTTTTATTAtatactttcaaaacaaaacgaCGAAAAGATTT
ACGAAACAAAACTTGGAACGTTTTCTGGTACCTTGCAATATTTATTGAAT
CACTCATCGCTGGTGATCCAACCAACCCTTACTAGAAAAGACACAGTAAA
AATTACAAGGTAAGAATTTTTAGAATAACAGTTGACACTATCTATTGATA
TTACGttctattcgatacgctccacttttcgatgaaaattcaatgtcccc
tgaaaatcgaattatagagtgtcaactgtatgtaCTGTAATTTTACTAAG
TCCCTAACTTCACTTAATAACGATATGAAGATCAAAGATATAATGATCAA
CTATGTGTAATTTTCACAATCACAGTCACGGCCATCATGATAAAACTCAT
CCACCTGAATCTTCTTTCTCTTGCATAACTATTGCATTAAAACATTGCTC
TTCACATTTCCTACCAGCCAATTTTTCATCATTGGCGTCGCTCATACATA
ACAAATTGCACCAGAAACGTGGGAGTTTTGTTGTGTTGGCAACCCTTTCG
GACATTCTTCATTCACTTTTCCGCCCGTTCTTCTCATGGCGTTCCATTGT
TCTTCCCTTGATTCTTTCTTCTAGTGGTTGTCCTTTTGTTGTAAAGGTGT
TGTTCATACTTTATAATACCTCATACAAGCGCCAATTCGGATAGGCATCA
AGGAAGCTTGACTCAAGGCGTTGGAAGCTCTCATGTGTTTATTTGTGATA
TTGCAACACGAGCTCTTTTTCATCGAAATTGAGTACGAGACAAAATATGA
AGCTGCAGCAATCAGGGAGAAATCAAATTGCAAATCAATAATGAATGTTt
agcataaattttgaaatcgtttgaaaaataaacaatttacAGGCCTTCCT
GTTTCAAAacctcaaaacatttgaaacaaaGCAGCTAAAAAATGTCATGA
GAATACACGTCAAAGGCGTAAGTATGGTTGGAAAAGGGTCTGAATTGGTC
ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGTTCCATTGTTCTTCCCTTGATTCTTTC
TTCTAGTGGTTGTCCTTTTGTTTTAAAGGTGTTGTTCATACTTTATAATA
CCTCATACAAGCGCCAATTCGGATAGGCATCAAGGAAGCTTGACTCAAGG
CGTTGGAAGCTCTCATGTGTTTATTTGTGATATTGCAACACGAGCTCTTT
TTCATCGAAATTGAGTACGAGACAAAATATGAAGCTGCAGCAATCAGGGA
GAAATCAAATTGCAAATCAATAATGAATGTTtagcataaattttgaaatc
gtttgaaaaataaacaatttacAGGCCTTCCTGTTTCAAAacctcaaaac
atttgaaacaaaGCAGCTAAAAAATGTCATGAGAATACACGTCAAAGGCG
TAAGTATGGTTGGAAAAGGGTTTGAATTGGTCACGCCGTGTCATGCATTC
CTTTGTACGTCGTTGTCAGTATTTCATCGCAATATTTCGAcattctttca
aatttgtataCAATCAGAAGCTTAAAACCAAGAAAATTATTCCCCAATTA
CAGTAGGGTGCGTTTCCTGGAGCATATTTTAATACCACACCAAAATAATT
AATATGACTAATATTTAAAAGTGGACAATCAGTTGGAGTAATTAACCAAA
CTTTCGAAGAATGTCATACAAGTGATTAAGTTGGATTTGCAGGCTTTTAA
TGTCTCGTTTCAATCTGTACAGGTGAAATGTATCTTTTTAATTCTGTCTA
GATCAGAACTTTTGGAAAGAAACCTTGAATCTATGTGTTTTTAAGTAACC
AGTTTCATTGTCCTATGCCATTTCTTTAACACCAAGTTATTAGATCAAGA
TCAAACGTTACTGTATCGATACAAAATTAACATACTATTGGGTTGGAAGT
GCCACATTTTGAAACTAATCAAGATATATTACCCCCTCGATTAGTTTTTT
AACACTATGCGAGCATTGTCTAAAGTCTACtgcattttaatttttggcTT
CCTGAAATTTGAGGTCTTTTCAGATGGAATGGTTAAAAAGTCCTAAATTT
AGTCCTAGaaccttgaaaattttgaatgaattttaaatttgcATAAGAAT
CAATCgcataattttttatcaattcttTCTGATAATTGTATGAttaataa
tttttctattttgattgaGCAATGAATTGTGGAATCTTCTGACGTGCTTG
ACCAGGATAAAAGGGAGGTTCTCCGTGACTTTTATACCAATTGCAATCGA
TCAGATTTATTTgtgaaattttgccaaattgaTGTAATTTTAGCGAAATT
GTGAAATCAACGATCTAATTGATGGTCGGTACCAACTTGGAGCATTTCTA
GATGGAAATTAATTGATTGATAAAATGTATTATCtcgcaaaaatgttttt
tgtgaattttgatgTAAATATGATATAACTCCTAAGATATTGGCACCTGA
AATGATCTGAAATAATAATTAATGTCAAAAAAGGTAGGCGGAGTAAttca
ttaaaacaaaaaaatatatttttgctgGCCATTAACGTTAAATGTGAATA
AATTTGACTACTGGATATTTGGAGGCGTAAGAGAAACTCTtcctaatatt
tctttttggtttgttttggttttgacgTTTGAGGTCTTTGATTTTGTCCg
gatgaaaaagttgaatgttttgattgtttATTCGGGTTCATACACATACC
TCTTTGGAAATCATATCTTGTGTGTGATATGATGGAATACATCCTGTTAT
TAATACTAACtacaagttttcttttcaagtgtTTTCTTTCTTATCTTCTG
TAAGCCAAACGTACAGGAAAAAGGTTGGCGCtacagttttttttttgttt
gaaaactaATAATGGATGGCGTGACATGTTACAGTGGTTATCAGCCTCCA
TTCAAAGGAAGTTAAGGCGGTATGATATTGCTACTATGATGTTAGCTTAG
TGGTAGACTTCATCAGTTGCTCGTACTTTTGATTGATTGACGAttgattc
aaaaatcaaaaataatttggcACAGCTGAGTAAAACTTTGTTTACTAGAG
GTTTTCCATCAGCTTTatgatttcaaaagtcaaataaaataaaaatctaa
atttaaaatgttatttattGTTCTAGTTGTACCGTCAGAGAAACTCAAAT
AAGTCCTAAATTCAAACGGCCAACGGCCGTTTAGAACAACTTCACTGCTG
ACTAGTTGGTACTCCTTACAGAGTCTTCGTGAGAAAGAATATGACAAAAT
ATTTACATTGTTGAAGTTTAGTGTTATTTTAACGAATTCATGATGGCCGC
TCTAAAATTCCCACAGTTTCCGGTGAAAATCAAATTACGCCGTACTGCAA
CCCAGTACACATGACACATACCCAATCAGTATGAAGTTCCTCTTAGCCAA
TTGAATTACATTATTCCTCTGCAATGTATGTCTCTCTCATTTTTATCTCG
ACCAAGACCTTTTTCTGAATTGACTTACATATTCTCTACAGTATTCCCAA
TAATACAATATCAACATATTTTCTTGGCACGCCAATCGTAACATGTATAA
GGATACACGTGACTACCGCTCCTCCTACATAATGACCATCATAGTTACTC
CCTATGCAGCAGCCATCTTTATGGTGTTAATAAAAGAGCTAAATTTATAC
CAAATTTTCTGTGTCTGatgtgaaaaaaattatgattgtAATTACTCTGT
TGTTTTTGAAGTAATTTCTAATCAGCGCATAATACAAATGATGGTAATTG
CAAATAATGTCAAACAAATAACATCTTTTCTTCATTTACATTGTTAATGG
CAAATTTGAAATATCTATCGGGTATCTGCCATAAAATTCCTCCAATATTT
TACCCCgtctttcaaattcaaattcggTCTAGGTTAAACCTATTCGGAAA
TACTAAACGAATTTGCATGTATTCGTAGATTGGATATCTACGTAACATAA
TAACCTAACTTACTTTaaactctgcaaaaaaaaagataGCATTATTATTC
TAATAGTTACCACTGTGAAGCTCCAATATGTTAGTATTTTTCTCTGTCAG
ATAACCTTGATGATTTATTAACAAAAACTCCTTTGAACTGTGCATCTATA
TACCGGATAAAACTATACCATAACCGAGTGATTTTAAATGAATTAAAAAC
CCCTGAGAGAGCGATTATTTTAAATGATGTATTTATAGGGAAATAAATTC
TGTGGTATGCGATGTGAATGGGGTAGTAAAACTCATTATATTTTGTCTTG
TTCAGCATGAACTAAATGCCATGAATTCTTGTCGGTGTACAATTTGtcga
tttctttctttaaacTACACCGATTTGCTagtttgtttttaatgaaatgt
tAGAAAAAAAGTCGTCGAAGCATAATTTCTATTAGAAGTTCACATGACAT
TGACCTTGAATCTCTTGAAAATCGCATAAAATTTTAGTTTCGATTTGTTG
TTTTTGCTCAATTTTCTAACTCCTCATAAAATCTCTCACTTTTGTCACCT
CTCACTCTCAAGCAGAATAGACATCACAAAATTGCGCAAGACTATTTATC
TAAAGTCTTTACTAATACTATTTATCCAATACCATACCAATTAAACAATA
CGTCATTATTTATTCGGCAGTTGCTAGATAAAGATAAACAGCtacctttt
ttcttttgatttcgaTTCCTATACATAATCCGATTTGGGGATAATTCGAC
CCACGTGAGATTTCACGGGGTTAAATCCCCTTTAGGTATTAATTACAATA
AAGTTAACGGTCTCAACTCTCACGGAGACTTTGCCAGATCCGGATCTGCT
GAATAATAGTTTGAATTTCTGACGGAGAGTGCTGATTCTATATAAGGAAT
ATGATATGTAGCGACACTCTCCTTCATAGATTTTTAAAGACAGCTGAGAA
AGATATGATTATGAGTTTGAGCGGAATGGCAGAGCACTATCAATTTATTT
GATTTATCAACCACCCTACTGATCAACGACAAAAAATCGTCAAATTTGTT
ttatgttaaagaaaagaatcaAGCGAGTGAGCAGGCTATATTAAAAATAT
GCGATTTTAAAAATAGCTCGTCTTTTCATTACAACAGTACATTGTTATCC
GAGAGAAGAGGACAACGTCTGTCAACGTCACTATCTATTTAANCTACCCT
AAGACTATTTATCAAATACCATACCAATTAAACAATACGTCATTATTTAT
TCGGCAGTTGCTAGATAAACAGctaccttttttttcttttgatttcgaTT
CCTATACATAATCCGATTTGGGGATAATTCGACCCACGTGAGATTTCACG
GGGTTAAATCCCCTTTAGtattaattacaaaaaagttAACGGTCTCAACT
CTCACGGAGACTTTGCCAGATCCGGATCTGCTGAATAATAGTTTGAATTT
CTAACGGAGAGTGCTGATTCTATATAAGGAATATGATATGTAGCGACACT
CTCCTTCATAGATTTTAAAGACAGCTGAGAAAGATATAATTATGAGTTTG
AGCGGAACGGCAGAGCACTATCAATTTATTTGATTTATCAACCTACCTAC
TGATCAACGACAAAAAATAGTCAAATTTGTTttatgttaaagaaaagaat
caAGCGAGTGAGCAGGCTATATTAAAAGTATGCGATTTTAAAAATAGCTC
GTCTTTTCATTACAACAGTACATTGTTATCCGAGAGAAGAGGACAACGTC
TGTCAACGTCACTATCTATTTAATTAAAGAGGATGCACATTAAAGGTCAA
TTGTCATTCTTTTCTTGTTATTGTCTTGCATTTAAACAAACCTTTTGTTC
TCGCCTCCAACATACTTGTATAAATAGGCAAGAGTGTATACATCTCATAG
CATTATTCAATAGTCTACCACTGAGACATCACAACTTACAAAAAAGAATC
GACTGATTAAGATCGAGTCTTACTTAGTACACTACAGTTACGTTATAAAA
TCATCAACATTTTTACACAATAGTTATGGCTTGTTCAACAATCTACACTT
TACTCATGGTCACTGTCATCTACGGATGTATTGTCGAATCACGACCACAG
AATTTTGATTTGCTTAACACAGCCGCTGgaaataaaaatcaagaatGGAA
AAATCATAAATCGTACGCATTCAAATGGGAAGGTAAGAAAAAGTTTCATT
AAAACTCTCGTTTGATCATTGTAAAGCTTCTAAACTGTTAATAACAATCT
AAGAGCACATGTTTTCGTAATAAGCCTTCCTTGGTCTGAAATTCTCAATT
CATTATTCGGAATTTATTGTAATTTACCTTTCATTGTATTGACCTGTTTT
CTTAatcaatctttctttttttttacaggaGCCTTCTCTTTGGGAGCACC
CGAACATTCAAAATGCCCAATGGTCATGCAACCAGAACATGGCCGCTTTG
TGTGCAGCGAAGGGACACTTTTGGAACGCAATATGTGTTTAGTTGAATGT
CAAATCGGTTTCGAGCAAGACCAACCACCAGTTGTTTACATCTGTGAAAA
TGNGCGAAGGAACACTTTTGGAACGCAATATGTGTTTAGTTGAATGTCAA
ATCGGTTTCGAGCAAGACCAACCACCAGTTGTTTACATCTGTGAAAATGG
AAAATGGTTTGATTTGAAACTCAACAATATTGATACACCAGAGCCTCGTT
GCGTCCCAAAACCAACACAAGTTGGACATTTCCCTGAGTAAATTTCTTGA
GTCGGAGGAATTCAAGAGCTTAAAGGAGGCGGAAAAGTgttaacaatttt
caaaagcaacaagattttttgaaatgatgcGCCGTCATCTAGTTTCCGGA
GAACTGGAACCGACTCTCTCGCTCGCCTCTCGACCGATGAGTGATAAGAT
GGAATTTTAAGTACTTTattaaaatttctatcaaacaATAGAGGAGATAC
TTAAGTGATGCTCCTTGAAAAATGACTTCGAATGTCTATATGTGTTTACT
TGGTTGGTTTTTACATGCCACCTACTTGGAGTGATCGCTATCACCACCAG
AAAAATAAtacaaagattttaattttcaatttgcaGATGATGCGCTGGTT
TGAGACCAGTTATTTTGTTTTGCAGTCACAAAAGAAAACTACAATGACAT
CAATGTATATAAAATGACAAACTTTTATAGAAGattattaaaaacataaa
tCCTAGTTAAGCTGGCTTGACCCCATCAATCGGGTTTTCCGAATATCATT
TTTTTTGTGAATATGTATGATAGAGAGAGTATATattatctaaaaacaaa
atattataaatatttatttatttattatttcaattattatgaaaaagaaa
tttaactgaaatatcaaatttattaaAGATGAAATTCTGTTTTAAAGATT
TAGTTTATAGGAATTAATTTAGCAAAgat Coding sequence (CDS) from alignment at sc0000012:741634..759462+ >TCONS_00001808 ID=TCONS_00001808|Name=TCONS_00001808|organism=Clytia hemisphaerica|type=CDS|length=744bp|location=Sequence derived from alignment at sc0000012:741634..759462+ (Clytia hemisphaerica)
ATGGCTTGTTCAACAATCTACACTTTACTCATGGTCACTGTCATCTACGG
ATGTATTGTCGAATCACGACCACAGAATTTTGATTTGCTTAACACAGCCG
CTGgaaataaaaatcaagaatGGAAAAATCATAAATCGTACGCATTCAAA
TGGGAAGgaGCCTTCTCTTTGGGAGCACCCGAACATTCAAAATGCCCAAT
GGTCATGCAACCAGAACATGGCCGCTTTGTGTGCAGCGAAGGGACACTTT
TGGAACGCAATATGTGTTTAGTTGAATGTCAAATCGGTTTCGAGCAAGAC
CAACCACCAGTTGTTTACATCTGTGAAAATGNGCGAAGGAACACTTTTGG
AACGCAATATGTGTTTAGTTGAATGGCTTGTTCAACAATCTACACTTTAC
TCATGGTCACTGTCATCTACGGATGTATTGTCGAATCACGACCACAGAAT
TTTGATTTGCTTAACACAGCCGCTGgaaataaaaatcaagaatGGAAAAA
TCATAAATCGTACGCATTCAAATGGGAAGgaGCCTTCTCTTTGGGAGCAC
CCGAACATTCAAAATGCCCAATGGTCATGCAACCAGAACATGGCCGCTTT
GTGTGCAGCGAAGGGACACTTTTGGAACGCAATATGTGTTTAGTTGAATG
TCAAATCGGTTTCGAGCAAGACCAACCACCAGTTGTTTACATCTGTGAAA
ATGNGCGAAGGAACACTTTTGGAACGCAATATGTGTTTAGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001808-exon-sc0000012-1491911889:741634..741706 | TCONS_00001808-exon-sc0000012-1491911889:741634..741706 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1510915933:741634..741706 | TCONS_00001808-exon-sc0000012-1510915933:741634..741706 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1575043694:741634..741706 | TCONS_00001808-exon-sc0000012-1575043694:741634..741706 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1491911889:751715..752092 | TCONS_00001808-exon-sc0000012-1491911889:751715..752092 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1510915933:751715..752092 | TCONS_00001808-exon-sc0000012-1510915933:751715..752092 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1575043694:751715..752092 | TCONS_00001808-exon-sc0000012-1575043694:751715..752092 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1491911889:758057..758215 | TCONS_00001808-exon-sc0000012-1491911889:758057..758215 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1510915933:758057..758215 | TCONS_00001808-exon-sc0000012-1510915933:758057..758215 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1575043694:758057..758215 | TCONS_00001808-exon-sc0000012-1575043694:758057..758215 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1491911889:758412..759462 | TCONS_00001808-exon-sc0000012-1491911889:758412..759462 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1510915933:758412..759462 | TCONS_00001808-exon-sc0000012-1510915933:758412..759462 | Clytia hemisphaerica | exon |
| TCONS_00001808-exon-sc0000012-1575043694:758412..759462 | TCONS_00001808-exon-sc0000012-1575043694:758412..759462 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:741634..759462 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000436 | Sushi_SCR_CCP_dom |
Blast
The following BLAST results are available for this feature:
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