TCONS_00001793 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001793
Unique NameTCONS_00001793
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1791

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001793 ID=TCONS_00001793|Name=TCONS_00001793|organism=Clytia hemisphaerica|type=transcript|length=1791bp
CTTATTTGTGAATGAAATGACAAATGaaaaaaaaaagaatgctGAATCCA
GCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAATGAAGACATTAA
AAAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAAGTCGAAAAGTG
GGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTAAACTTGGAAAA
AGAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAAGCAAGCTTGAG
TAAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGACGATGAGAATA
AAAGTGCAACGATTATGGGAAAATATAAGTATAATTCATTGCCAAGGAAA
AATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACTTTTTATTTGGA
CAGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACTTGATCGTAAAG
ACATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCACCATTAATGCTA
AAGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTGAAAAAGGACTT
ATCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGATAAACAAACAC
ATATAGCTTTATATAAATTTCACGCAAGACATAAAGATGAAATTTCATTT
AATGATGGTGATCCGATACaagttttgaaatgttttgaagATTTGTGGTA
TGAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTTTCCATCACGTT
ATGTTGCTGATATACTTTCTGCAGAAATGATAACATCTATTGAAGACGAT
TCTGACCATAGACAATTTCACATGAGattcTTAGGGTCAGTAGAAGTGAA
CAATCACAAAGGAGATGAAATATTATGTTTTGCCATCGCTAAGGTGGTAA
ACCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGTGTGTATTGCAA
GTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGATAACACTTCAGT
CAACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCCAAAGAAAGGAA
AGCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGGCGCATTTCTTT
TCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATAGACGGTA
TTTTGGGTTCATAACAAAACATCCAGATGACCATCGGTTTGCTTGTCATA
TTTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGCTCATTGGgGAT
TGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTCCAATCGA
AGATTTGTATATTGAATAgaatgatttatttttcatgatttttcataCGT
CTCGACTGTTACCCTTGAAAATTACAACAAAGCGATTATACCTACGTATA
tctaattgaaaaaattgatcgGCTCTAATTGTGTAATACAAGACTCTTAT
ATAACAAAAAGGTTTGCgattgattgatattttttctctATGAGCGGTTC
TTGCAAAGAAGACGCTTGGTTCAGAcgaatttatattttttcacttttct
tatATCGGTTAAGTTTAGGGGTTTAGGGTACAAACTAATTGTAAATAAAG
TCTATTATGTAcctagaatttaaaaaatacgATTAATTgcctattgtttc
atttttgtttgtttttttttctacaaatttatataaatgataatattttt
caatgcacaattcttttttgtttttgttgacaCTTTGTATACTTTATAAA
tattataattaaaaaaaacaaatatcacCAGACCTTTGAAC
Run BLAST on NCBI

protein sequence of TCONS_00001793-protein

>TCONS_00001793-protein ID=TCONS_00001793-protein|Name=TCONS_00001793-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MKKKRMLNPAAEAIQREKTDSNEDIKKIPHSKVEKKTSKSKSGDSNGVLR
KIKSPKLGKRMLPDAPSLKPAKASLSKSSDDLLSVNKTDDENKSATIMGK
YKYNSLPRKNKKEKSRNGSMSTFYLDSNSTGKVSKSPKLDRKDISSSNQS
SLNNSPLMLKKKVSHTGSNPDLKKDLSSKVEIVNTNNFDKQTHIALYKFH
ARHKDEISFNDGDPIQVLKCFEDLWYEGINLLTSKQGVFPSRYVADILSA
EMITSIEDDSDHRQFHMRFLGSVEVNNHKGDEILCFAIAKVVNQRSMLSS
SNPPTCVLQVSSKGLRICNLDDNTSVNQDQTQVGAERKPKKGKQVDITAN
EEGDVAHFFSLKNVTYCGNHPKDRRYFGFITKHPDDHRFACHIFMSKFST
DNIAKLIGDCFKKYYSTYLDYRAPIEDLYIE
Run BLAST on NCBI

transcript from alignment at sc0000012:619106..629400+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001793 ID=TCONS_00001793|Name=TCONS_00001793|organism=Clytia hemisphaerica|type=transcript|length=10295bp|location=Sequence derived from alignment at sc0000012:619106..629400+ (Clytia hemisphaerica)
CTTATTTGTGAATGAAATGACAAATGGTATGAGTTCAGATTTAAATCGAT
TTATATATGGTATGGATAGATGCATGAggccttttttgtttttatggtAG
ATAAAGCCTTGACACTCTACttaattattcttttatttttgttttttatt
tcatttcattgGTTAGCTCTTAAAGAAAGAATGCAATGTGTGAGAGTTTT
AATTGTTTATTTTGGCATAGTTGTTTGTTTGGTAGTAGCtatagctctaa
agctctaataTAAAAGAGCATATTTTATGAAAGCCagcgaatagaccttt
tttcaaagaggaggtcccctgttgaataattatgtagtccagccataaaa
acaatgatagagccatgcataattactgtatcatgtatattgtaataatt
atgcatggttttgtCATTGTTTTtctctgctggactacataattattcaa
cagggtggcctctttgaaaaaaggtctataccgTGAAgatgggtaacttg
catcagtggagggaaacttgcatagccatcaaatgactgaccaaccaaag
tagcaaaatttcaaaacaaatcaactacgcagctccgctcgcagctctac
tcttctaccattttgttttttgatttaactttgtattttttaataaccag
ccaggtcattcatttgagggctatgcaagtttccctccactgatgctaGT
TACCCCACTTCACGGTATTATTCTTCAATCCAGACGGTACCGTCAACTga
tctaacttgggacgattggtcatgggactggttgatatctggcctgtata
tTTTCACACTGTtaaaaatctctttgacaacaaatttgttttgataactc
caccaagtttatcaatcatactttctgtcataacatgtcacgataacttt
ctcTAATAGCgtgcttttttaatttttttgttttcattcaaaatgaccgg
acgccaatttggagaattagagaacgtctGCCGTCTAACCACCTATTGCT
CGATaagattaacaaataacgagtgtgtaacttgccgggcaagtgacgtc
aaacactccatcgttttgccactaatttgttcttcttcattCCAGACATT
TGCGTGTTTTCCActgcagatttttttcatatttcgatttaaaagcgcag
cctactcggtgcaaaagagaaatcttgtattttttaatatgccattcaat
aactcaaatcaaatgactttggagattcgatgaaatggtggccaaattgc
cgtcccatttttgtcagatagtccaaaGTTAGAGCAGTTCACATAACCAA
TCGAACGTTTgattgtgatcgaagtaatggataatgatcgataataatCA
AGAAGGTGGTCAGTGACCACATATCGATTTTATCGGTGATTGAAATGCTC
ACTCAACTCAagattatggcattttcttctACCATTTTCGATTCGTTCAA
TCATTTTGATTACTCTTCGATTACcttcgatcatattgaatacctttgAT
TGTATCAAATAccttcgattttatcaaatatgtttcctGTTGTGCGATAA
ACCACTTTTGTTTTATCTGATCAATCAGATTCAGAATGCGCGATATGAGT
TATTTGAGGGAACCCAGGGCAAacagtctaagcttaaactcctataccag
gattagaaactaggctagtcttacctcttcagacctcttttatctttccc
tttacaacaatacaatgctggcaagttgacacaacacattgacctGTGAG
AAAAGTTTAtatatagaaatctgcaacaaaaacgaaagtggtctcttcta
ctgattgttTTCCGGTGCTCCTTCGTaactgtttatcaaatttccaccaa
taagATTGCCGCATTTCACACAGCCTTTCCTTTTAGCGCtcgtggcctct
cagtgccttgcacgacaggCCATAATCCGTGATCTTAAGGTTTAGGTTTT
TTACCACCTTCAATTTACtaaagaaagcgggaatttgatgcaagagttag
attaTCAACAAAGTGcagtaaaaaatcattgaataaaagaagaactttaa
attttaaatatttttattttgaagaattggtgcaaaaaagtgaaacatgg
aaaagtttcattttttattggttcaatcTAAATAGgagatttggaaaact
ttctatttttGGTTTTTAGCACAAACCTGTAACTATGGGACAAGCACCCC
ACTGCTAAGATGTTAGctcaaaatcgaaagtgaaaccactgaaaatgaaa
gtaaaattggcCCGCACTCCAAATAatgtaatcttgatataggagtttaa
gcatAGACTGGCAAAtatttccagatctggaaatcTGGATTTTTCTATAC
CAACCGCTAGCTGGGGAAGATGTGCTCCCTAGCAATGGAATTTTCAGAGC
TTTTGGCTTACTAGGGATGCTCCCGATCATTGAAAGGTGCTTTTCTTGAA
AGCGGACCCGAATAAAATTCACAAATAAAGATCATCCCTTTGATAAATTC
TAGAAAGCAAGCACAAGAGTATTTCATAATTCTGTGAGTATTGGTTTGAT
AGCTCTGATTCATTCTGGCCTGTACTTGCTGCGCTAATTTGAGAATACCG
GCAtttttgtcacaacagtggaGCTCATAGTGTCCTAGTAGGTTGGTTCC
CCTACcttgaaaattgataaaaatcctCCTGCTCCCTTTTAGTTCCCCTC
CCTAAGCCTAAGGTTTTTAGAATGATTCCCCCCCcccttgaattttttct
tttgattttttgctcataACATAATATATACTACTTCTATTCATGTTATA
TCATCCctatatacaaagaaaaaatgtaaattgtCACCACCTCGAATATA
AAACACTATTACATGTTTTTAGCTTGAAGTTGAACagatatattttatgt
tttatgtttGACACCAGAGAACAGAAAATtcttttcctcagattttttct
CCCCACCCTTGActttttggagtttttttttcCTCCTTTTGATTCCCCCC
Ctctagaattttgaaaatgattttgcccacctttttcccattttctgaaa
aaaaactatGAGCTGCACTAGAGAACTAGTTTAATGACCTCAAACAGGTC
TCACCAATCCACTAAGTTCATTGCGAAGAAACAAGGCTGCCCTTGCTGGA
CACTTCACTTTTAGCATTGTATCACACACTGATCAAATACATCCTTATAT
TGTTTTAGTTTGCATTTACTTAACTCAAACACTTTTCaccaaaaaataat
ttgaatctttttctCTCGCATGCGTAATATTGATTAGGGAAGTTTTTAAA
AAGGATACACTCGAATTAACAAATGGCATTTCCCAATCCGAGAAATTTTA
TTTCCTTAGTTTtcagggggggtcggtactaaaatccaagACATATAGAG
TACTACAaggttttttgacgatttttgacatacccccacctaatttttga
aaaaggaattttagtacacatgtactaaaatttattttgacattttagca
taGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNttagtacacatggtactaaaatgcttttaggc
tttttttgtaataccaccacgtcactaaaagtcatgatgtctgaaatttt
agtaccgacccccccccctgtagtTTTTGAAATTACATTTCCTGATTCAG
AAAGAAATTATGGAATAAAGCAAGTGAATTcatgaatttaaggtcataat
ataAATATAGTTTGTGAAATTTACTTTCCCTAGCATGTAGAGAGTAATAA
TGTAAAAAGTTTGTGATCTCTCTTTTCCCTCTTTTCCCGTCATTAGGATT
TTTACTTGAGTgtgtaaagccttaaaaaccAATGTGCTGTCTTGGTAATA
GAGTGGTTGGTTGATTAGTTTGCCGTGGCACATTAAACAATCAATCCTTT
TATTGCGTTTAAAGTTtccaataaaatttcatttttatgaacCTAATGAT
GGTATGAGCACCGAAAAGCTTTGACACaaataaaaattgtttcttcaatt
ctaaaatttttattaatgaatgataatgtttttctaaaaccTAGATTTCC
TGTGTGACTTAACTGTCTAGTAGGGTTTTCACAAACACAAAAATGTCATA
CTAATAACTTTAACAAGGTAATAATATTGCTTTTCCATtttctgtagaaa
aaaaaaagaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAAC
TGACAGTAATGAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAAGA
AGACTTCTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATC
AAGAGTCCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTAAA
ACCTGCTAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTA
ATAAAACAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAATATAAG
TATAATTCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAG
CATGTCAACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAAT
CACCAAAACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTT
AATAATTCACCATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGTAA
TCCAGATTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATACAA
ACAACTTTGATAAACAAACACATATAGCTTTATATAAATTTCACGCAAGA
CATAAAGATGAAATTTCATTTAATGATGGTGATCCGATACaagttttgaa
atgttttgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAAAC
AAGGTGTTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAATG
ATAACATGTAAGGAAGCTTCTTTTTTGAATTAAGATGATAACATTTTACT
GTAGACCAGCGTCCAAGGCGAGATTCAGAAAACACCTTTAAAAacggttt
tcgtagggcactctttagatcagggcaaattttcaGTCTCTAGATCATGA
GATAATTAATGTTTAAAGAAGGCAAATATGCCAAAATACTGCTGACTCCA
TAGTGTGAACCCCCCTTTTTTTTAGGGGAGGGGTCCAACTTTTCCAAAAA
TGCTTTATAGGGAGGGGATAGGAGATTTACCAAAAAAAATGGGGGGTTTA
AaattttaggggggggggggtcaagatTTTAGGGGGGGTCAAGTAAAAAT
AGGAGGGACTACaacttttggtcaaaatatctatcaTATTTATATGTATT
ATTAAAGGTTCAGCGATTCTTCAAGAGTGCTTGCTCTACAAGGTGAAGGA
GCGTGATacaattttcagaagaaaatacACAATTTGCTTCAcagtacttt
aagtttcatgttcTAACTTGGGTttagacccctctgcacactatgatcag
caaaaaatttcaataatttttaatatttaaatcaaaatatgcttTCAGTA
AAATGTTGACGTCATAAGGAAAACATTCTAAACGTCATTTTTTTGTctca
aaaatgccatttcttgGCACCAGGTAGTCGAATagtaacaaataacccca
ttttctttatcctCTTTTCGCACTGAATCTGATTGTAGCTTGtagtttga
ttttcaaaaatcgctAGTAAAGGCCCTTTATAAGTTCCATTGATTAACTA
AAAATGGATTCACTCGAAACTACATCAGATTCTAGAGGCAAATTTTTTGT
TGAACTTACACCCTATTAAGAGCattatatcaaaaatttgccctgatgtA
GGAGTGCCCTAAGAAGTGACACACTTCACTACCTCGACGGCTGGTCTACT
GGATGCCCACTGGATGAAAACGCTTAAATGTTTTTCATATATGAAacatg
tttataaggaacttgaggctgaaaatgttATCTATAATTTGAATTAATTC
TCAGCACTGTaaagaagaaataatttttactgTATGATTCAAACCTTTAA
ATATTAGATTCAATTTGAATAAAGTAGGAATTCTTTGCACTATTACCGAT
CTTGTTTAAGATTCTAGCGACCGTGGTGCAAAGGTCGAGCATTCAGAGAA
GTCATACCAAATATTGCAAAACGGTACTTGATACTTAATATTCAGTAATT
TTTAAATAGAGGATCAAGGGTAACTAGAGTATCAAGGGTAACTATAGTAA
TCTCTTGAAAGAGCAGCTGTTGAGTTGCCTGCCTGCTGCCACAGACTTTT
GTTTAAGAAAAGTTTTCCTTATCACTTTCAGCTATTGAAGACGATTCTGA
CCATAGACAATTTCACATGAGGTAATTCAATCTATCTTTCGTTATTCAAG
TTTAAAGAAGactgtacaaaaattcagaaaacctGTATGTTTACTCGTAA
GagtgaaagatttttaaaatctaTGCCCCTTTTTGGCCCCAAGATAGATC
CCATGGTGTGGAGAATGGCGAACATTTGGACTAAAGCTATAAAGGCGATT
CCAGCTACCTTTTAGGTATTTGATTGGTAGCCAACTTACAAAAAGATTAC
TGAATGTTCCTATGACGGAATAAGTCATACAGAAAGATTTTGTGAAGAga
actaaaaaaaaacttaatatttcttgttttgctttttcatttttagattc
TTAGGGTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATATTATGTTT
TGCCATCGCTAAGGTAAAGCACAGCATAATTTCATGAActggcttcaaat
tatttgcATTGTCTAAATCTATCAATAATGTTAATATATATTGTGGTGAC
AGTGCTCCATGCGTTAATGTAGAGCCAATATCCATTTagaacaaaattat
attggttTCAGATCTGAGTGATAAATATCAGTAATACTGTACAATAAATT
AGGTTTTGTACTGCTAGCTTCTTTATCAGATGCCTTTCTGAAGCTACCAT
AGATGATAGTAAACCAtgatatataagaacatcatgGTTTCAAGACCAGA
AATTTGACAACATTTCACTgcatttcaaggttttttggactcactaaatt
ataaaaataagaaCCTATAATATAAGCCTATAACCAGAAcagtaaagaaa
tttttgacgTTGTTATAAAAAGATGTATAtgggtttctttttttctcttc
ctGGTTAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCT
ACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGA
TGATAACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAA
AGCCAAAGAAAGGAAAGCAAGTCGATATTACGGTGAGAAGTATTTAAGTT
CTTACTGACTGTTTTAGAATATTTTCATACTGTTAATTTCATTGCCCGGT
ATTACAGTAGGTATGCACGTGGACTCATTCGACTCGAAACCATTTCTTTT
GTGAAAATAGAATTGGAGGTATCAAAAAAGGCTTTTCAGCTATTTACTAT
TAATAGCCCTATCCAAGTGGTGTAATTGAAGATGCTCAATTTGGACaaat
tatcatattttttgGAAGACCTACGAAAAGATAGTTTTACTGTGCTGCGT
CGCTAACCTACCAAATAATTCAATGGTTTTTCACATAtttgtcaatttta
ttttctatctaTATTATGCAGGCAAATGAAGAAGGAGATGTGGCGCATTT
CTTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATAGAC
GGTAAGGTTCATCTTCTGTagattgaaatttattttttcaaaggttgTTG
TCTCGTATCTAGTAAAGAAAACAAATGGACAGCCTATATTATCTGTTCCT
GTTCACTCGAAAAGTATCATTTTGCAATAAATCTACTGTTATTGATAATG
TGTAAATAATTTTCTAACGGAGACCAGAAAAAAAGCATGGTGgtcaaaat
ccggctttttGCTTGAGTtagaaaatatgacgtcatcttcatTTACGAAT
ACGCCAACGTACCAATGCAAAACGAGTAAGAAGCTCATTATATCCAACTG
TTATTTTCATATCCATATTTTCGTAGGTATTTTGGGTTCATAACAAAACA
TCCAGATGACCATCGGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTA
CTGACAACATCGCTAAGCTCATTGGGTGAGTGATTTTCTTCCCGTTTGGG
TATTTTGTTGAAATTATCTGATCCTGTTTTAAATCTTTGGTAGCTCAgta
atttaaggctttttgacaATCTTTTCGACTGCTAATAGGGGTCAAGTTCA
ACTGGCTATATGCATATTGTGAACTGAGGGAGTTATGAAATTGAGTAACG
TTTCGAATTCTTTTATGAATGTATCTATGAACTTTTGTGACAAAACACCC
GAATGGCCAGCCCTGTTGAAATTATTGAGACAGTGGAGTATAAAGTTTAT
CTACATTTAGGAAAACTCCTCAAAGCTTTTACGAGTTTAATTCATTTTGA
GCCCTCATTTTTTCCACTTTAACGGTTATCGAGCTCTTACATATCCACTG
ggtacattttattttcaaggggTTCTTTTAGATGATTTTTTAAGGATTAA
aacacgtgtccagggggtgaaaaataaaaatgtttaggGGTAAGTTATTG
AAAGAATAATACATACTTCATCcccctaaaaaaatatttttttggaagaG
CCAATTCTGATAAAAAGATTACAAAGTATAACTTTAATTAATCGAGGGGt
aaaatcactcgaaaaattatcgtacacctctacaaaaagtcaaagaaaaa
gtcaaacaGAGTCAAACAGTCAaaaattctgagaaaaaaagtcaaaaagt
caaataaaagtcaaaaaaagtcttgaaaaagtcaaaaagtttcttgaatg
ggtggatgggtggagcaaaatttatgggcggTGGGTGTTTCGGAAAGATT
TCGGTGGAAAATTTTGGGCGCCCGAGGACGCTGGGCGTTTTTGTTGAGAA
AAAGTCGAaacgaaagtttgaaaaaagtcaaataaaagtaaaaaaagagt
ttaaaagtcaaaaagtatcgtacacctttttacaagtgatttacccctcg
caaTTAATTATAATGATAGtgatgtaaatttttttgttttcattttccag
gGATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTCCAA
TCGAAGATTTGTATATTGAATAgaatgatttatttttcatgatttttcat
aCGTCTCGACTGTTACCCTTGAAAATTACAACAAAGCGATTATACCTACG
TATAtctaattgaaaaaattgatcgGCTCTAATTGTGTAATACAAGACTC
TTATATAACAAAAAGGTTTGCgattgattgatattttttctctATGAGCG
GTTCTTGCAAAGAAGACGCTTGGTTCAGAcgaatttatattttttcactt
ttcttatATCGGTTAAGTTTAGGGGTTTAGGGTACAAACTAATTGTAAAT
AAAGTCTATTATGTAcctagaatttaaaaaatacgATTAATTgcctattg
tttcatttttgtttgtttttttttctacaaatttatataaatgataatat
ttttcaatgcacaattcttttttgtttttgttgacaCTTTGTATACTTTA
TAAAtattataattaaaaaaaacaaatatcacCAGACCTTTGAAC

Coding sequence (CDS) from alignment at sc0000012:619106..629400+

>TCONS_00001793 ID=TCONS_00001793|Name=TCONS_00001793|organism=Clytia hemisphaerica|type=CDS|length=10368bp|location=Sequence derived from alignment at sc0000012:619106..629400+ (Clytia hemisphaerica)
ATGaaaaaaaaaagaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGA
GAAAACTGACAGTAATGAAGACATTAAAAAGATACCACACTCGAAAGTTG
AAAAGAAGACTTCTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGG
AAGATCAAGAGTCCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATC
CTTAAAACCTGCTAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTAT
CAGTTAATAAAACAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAA
TATAAGTATAATTCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAA
TGGTAGCATGTCAACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTT
CAAAATCACCAAAACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGT
TCACTTAATAATTCACCATTAATGCTAAAGAAGAAAGTATCACACACTGG
TAGTAATCCAGATTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAA
ATACAAACAACTTTGATAAACAAACACATATAGCTTTATATAAATTTCAC
GCAAGACATAAAGATGAAATTTCATTTAATGATGGTGATCCGATACaagt
tttgaaatgttttgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAA
GCAAACAAGGTGTTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCA
GAAATGATAACATCTATTGAAGACGATTCTGACCATAGACAATTTCACAT
GAGattcTTAGGGTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATAT
TATGTTTTGCCATCGCTAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCA
TCAAATCCACCTACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGAT
ATGTAATTTGGATGATAACACTTCAGTCAACCAAGATCAAACACAAGTTG
GAGCTGAACGAAAGCCAAAGAAAGGAAAGCAAGTCGATATTACGGCAAAT
GAAGAAGGAGATGTGGCGCATTTCTTTTCACTGAAAAACGTCACGTACTG
TGGAAACCACCCCAAAGATAGACGGTATTTTGGGTTCATAACAAAACATC
CAGATGACCATCGGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTACT
GACAACATCGCTAAGCTCATTGGgGATTGTTTCAAGAAGTATTACAGTAC
GTATCTGGATTACAGAGCTCCAATCGAAGATTTGTATATTGAATAgATGa
aaaaaaaaagaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAA
ACTGACAGTAATGAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAA
GAAGACTTCTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGA
TCAAGAGTCCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTA
AAACCTGCTAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGT
TAATAAAACAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAATATA
AGTATAATTCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGT
AGCATGTCAACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAA
ATCACCAAAACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCAC
TTAATAATTCACCATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGT
AATCCAGATTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATAC
AAACAACTTTGATAAACAAACACATATAGCTTTATATAAATTTCACGCAA
GACATAAAGATGAAATTTCATTTAATGATGGTGATCCGATACaagttttg
aaatgttttgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAA
ACAAGGTGTTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAA
TGATAACATCTATTGAAGACGATTCTGACCATAGACAATTTCACATGAGa
ttcTTAGGGTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATATTATG
TTTTGCCATCGCTAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAA
ATCCACCTACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGT
AATTTGGATGATAACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGC
TGAACGAAAGCCAAAGAAAGGAAAGCAAGTCGATATTACGGCAAATGAAG
AAGGAGATGTGGCGCATTTCTTTTCACTGAAAAACGTCACGTACTGTGGA
AACCACCCCAAAGATAGACGGTATTTTGGGTTCATAACAAAACATCCAGA
TGACCATCGGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTACTGACA
ACATCGCTAAGCTCATTGGgGATTGTTTCAAGAAGTATTACAGTACGTAT
CTGGATTACAGAGCTCCAATCGAAGATTTGTATATTGAATAgATGaaaaa
aaaaagaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTG
ACAGTAATGAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAAGAAG
ACTTCTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATCAA
GAGTCCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTAAAAC
CTGCTAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTAAT
AAAACAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAATATAAGTA
TAATTCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCA
TGTCAACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAATCA
CCAAAACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTTAA
TAATTCACCATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGTAATC
CAGATTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATACAAAC
AACTTTGATAAACAAACACATATAGCTTTATATAAATTTCACGCAAGACA
TAAAGATGAAATTTCATTTAATGATGGTGATCCGATACaagttttgaaat
gttttgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAAACAA
GGTGTTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAATGAT
AACATCTATTGAAGACGATTCTGACCATAGACAATTTCACATGAGattcT
TAGGGTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATATTATGTTTT
GCCATCGCTAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCC
ACCTACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATT
TGGATGATAACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAA
CGAAAGCCAAAGAAAGGAAAGCAAGTCGATATTACGGCAAATGAAGAAGG
AGATGTGGCGCATTTCTTTTCACTGAAAAACGTCACGTACTGTGGAAACC
ACCCCAAAGATAGACGGTATTTTGGGTTCATAACAAAACATCCAGATGAC
CATCGGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTACTGACAACAT
CGCTAAGCTCATTGGgGATTGTTTCAAGAAGTATTACAGTACGTATCTGG
ATTACAGAGCTCCAATCGAAGATTTGTATATTGAATAgATGaaaaaaaaa
agaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAG
TAATGAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAAGAAGACTT
CTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGT
CCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTAAAACCTGC
TAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTAATAAAA
CAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAATATAAGTATAAT
TCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTC
AACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAATCACCAA
AACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTTAATAAT
TCACCATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGTAATCCAGA
TTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATACAAACAACT
TTGATAAACAAACACATATAGCTTTATATAAATTTCACGCAAGACATAAA
GATGAAATTTCATTTAATGATGGTGATCCGATACaagttttgaaatgttt
tgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAAACAAGGTG
TTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAATGATAACA
TCTATTGAAGACGATTCTGACCATAGACAATTTCACATGAGattcTTAGG
GTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATATTATGTTTTGCCA
TCGCTAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCT
ACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGA
TGATAACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAA
AGCCAAAGAAAGGAAAGCAAGTCGATATTACGGCAAATGAAGAAGGAGAT
GTGGCGCATTTCTTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCC
CAAAGATAGACGGTATTTTGGGTTCATAACAAAACATCCAGATGACCATC
GGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTACTGACAACATCGCT
AAGCTCATTGGgGATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTA
CAGAGCTCCAATCGAAGATTTGTATATTGAATAgATGaaaaaaaaaagaa
tgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAAT
GAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAA
GTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTA
AACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAA
GCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGA
CGATGAGAATAAAAGTGCAACGATTATGGGAAAATATAAGTATAATTCAT
TGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACT
TTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACT
TGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCAC
CATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTG
AAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGA
TAAACAAACACATATAGCTTTATATAAATTTCACGCAAGACATAAAGATG
AAATTTCATTTAATGATGGTGATCCGATACaagttttgaaatgttttgaa
gATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTT
TCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAATGATAACATCTA
TTGAAGACGATTCTGACCATAGACAATTTCACATGAGattcTTAGGGTCA
GTAGAAGTGAACAATCACAAAGGAGATGAAATATTATGTTTTGCCATCGC
TAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGT
GTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGAT
AACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCC
AAAGAAAGGAAAGCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGG
CGCATTTCTTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAA
GATAGACGGTATTTTGGGTTCATAACAAAACATCCAGATGACCATCGGTT
TGCTTGTCATATTTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGC
TCATTGGgGATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGA
GCTCCAATCGAAGATTTGTATATTGAATAgATGaaaaaaaaaagaatgct
GAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAATGAAG
ACATTAAAAAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAAGTCG
AAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTAAACT
TGGAAAAAGAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAAGCAA
GCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGACGAT
GAGAATAAAAGTGCAACGATTATGGGAAAATATAAGTATAATTCATTGCC
AAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACTTTTT
ATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACTTGAT
CGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCACCATT
AATGCTAAAGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTGAAAA
AGGACTTATCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGATAAA
CAAACACATATAGCTTTATATAAATTTCACGCAAGACATAAAGATGAAAT
TTCATTTAATGATGGTGATCCGATACaagttttgaaatgttttgaagATT
TGTGGTATGAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTTTCCA
TCACGTTATGTTGCTGATATACTTTCTGCAGAAATGATAACATCTATTGA
AGACGATTCTGACCATAGACAATTTCACATGAGattcTTAGGGTCAGTAG
AAGTGAACAATCACAAAGGAGATGAAATATTATGTTTTGCCATCGCTAAG
GTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGTGTGT
ATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGATAACA
CTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCCAAAG
AAAGGAAAGCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGGCGCA
TTTCTTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATA
GACGGTATTTTGGGTTCATAACAAAACATCCAGATGACCATCGGTTTGCT
TGTCATATTTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGCTCAT
TGGgGATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTC
CAATCGAAGATTTGTATATTGAATAgATGaaaaaaaaaagaatgctGAAT
CCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAATGAAGACAT
TAAAAAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAAGTCGAAAA
GTGGGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTAAACTTGGA
AAAAGAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAAGCAAGCTT
GAGTAAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGACGATGAGA
ATAAAAGTGCAACGATTATGGGAAAATATAAGTATAATTCATTGCCAAGG
AAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACTTTTTATTT
GGACAGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACTTGATCGTA
AAGACATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCACCATTAATG
CTAAAGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTGAAAAAGGA
CTTATCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGATAAACAAA
CACATATAGCTTTATATAAATTTCACGCAAGACATAAAGATGAAATTTCA
TTTAATGATGGTGATCCGATACaagttttgaaatgttttgaagATTTGTG
GTATGAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTTTCCATCAC
GTTATGTTGCTGATATACTTTCTGCAGAAATGATAACATCTATTGAAGAC
GATTCTGACCATAGACAATTTCACATGAGattcTTAGGGTCAGTAGAAGT
GAACAATCACAAAGGAGATGAAATATTATGTTTTGCCATCGCTAAGGTGG
TAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGTGTGTATTG
CAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGATAACACTTC
AGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCCAAAGAAAG
GAAAGCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGGCGCATTTC
TTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATAGACG
GTATTTTGGGTTCATAACAAAACATCCAGATGACCATCGGTTTGCTTGTC
ATATTTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGCTCATTGGg
GATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTCCAAT
CGAAGATTTGTATATTGAATAgATGaaaaaaaaaagaatgctGAATCCAG
CAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAATGAAGACATTAAA
AAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAAGTCGAAAAGTGG
GGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTAAACTTGGAAAAA
GAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAAGCAAGCTTGAGT
AAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGACGATGAGAATAA
AAGTGCAACGATTATGGGAAAATATAAGTATAATTCATTGCCAAGGAAAA
ATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACTTTTTATTTGGAC
AGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACTTGATCGTAAAGA
CATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCACCATTAATGCTAA
AGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTGAAAAAGGACTTA
TCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGATAAACAAACACA
TATAGCTTTATATAAATTTCACGCAAGACATAAAGATGAAATTTCATTTA
ATGATGGTGATCCGATACaagttttgaaatgttttgaagATTTGTGGTAT
GAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTTTCCATCACGTTA
TGTTGCTGATATACTTTCTGCAGAAATGATAACATCTATTGAAGACGATT
CTGACCATAGACAATTTCACATGAGattcTTAGGGTCAGTAGAAGTGAAC
AATCACAAAGGAGATGAAATATTATGTTTTGCCATCGCTAAGGTGGTAAA
CCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGTGTGTATTGCAAG
TTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGATAACACTTCAGTC
AACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCCAAAGAAAGGAAA
GCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGGCGCATTTCTTTT
CACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATAGACGGTAT
TTTGGGTTCATAACAAAACATCCAGATGACCATCGGTTTGCTTGTCATAT
TTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGCTCATTGGgGATT
GTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTCCAATCGAA
GATTTGTATATTGAATAg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000963XLOC_000963Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001793-exon-sc0000012-1491911889:619106..619131TCONS_00001793-exon-sc0000012-1491911889:619106..619131Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:619106..619131TCONS_00001793-exon-sc0000012-1510915933:619106..619131Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:619106..619131TCONS_00001793-exon-sc0000012-1575043694:619106..619131Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:623853..624612TCONS_00001793-exon-sc0000012-1491911889:623853..624612Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:623853..624612TCONS_00001793-exon-sc0000012-1510915933:623853..624612Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:623853..624612TCONS_00001793-exon-sc0000012-1575043694:623853..624612Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:625987..626026TCONS_00001793-exon-sc0000012-1491911889:625987..626026Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:625987..626026TCONS_00001793-exon-sc0000012-1510915933:625987..626026Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:625987..626026TCONS_00001793-exon-sc0000012-1575043694:625987..626026Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:626352..626418TCONS_00001793-exon-sc0000012-1491911889:626352..626418Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:626352..626418TCONS_00001793-exon-sc0000012-1510915933:626352..626418Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:626352..626418TCONS_00001793-exon-sc0000012-1575043694:626352..626418Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:626864..627037TCONS_00001793-exon-sc0000012-1491911889:626864..627037Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:626864..627037TCONS_00001793-exon-sc0000012-1510915933:626864..627037Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:626864..627037TCONS_00001793-exon-sc0000012-1575043694:626864..627037Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:627377..627456TCONS_00001793-exon-sc0000012-1491911889:627377..627456Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:627377..627456TCONS_00001793-exon-sc0000012-1510915933:627377..627456Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:627377..627456TCONS_00001793-exon-sc0000012-1575043694:627377..627456Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:627782..627880TCONS_00001793-exon-sc0000012-1491911889:627782..627880Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:627782..627880TCONS_00001793-exon-sc0000012-1510915933:627782..627880Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:627782..627880TCONS_00001793-exon-sc0000012-1575043694:627782..627880Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:628856..629400TCONS_00001793-exon-sc0000012-1491911889:628856..629400Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:628856..629400TCONS_00001793-exon-sc0000012-1510915933:628856..629400Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:628856..629400TCONS_00001793-exon-sc0000012-1575043694:628856..629400Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001793-proteinTCONS_00001793-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:619106..629400 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.647	27.1829	5.66236	3.77596	3.2662	2.27032	5.10327	4.91258	7.23788	5.71156	5.95275	3.95791	7.14416	6.00978	6.72363	7.07883	7.89563	6.66057	9.01122	11.101	11.2316	9.89915	23.2189	23.7042	7.34369	7.58553	10.7626	9.25456	13.5656	13.314
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR006020PTB/PI_dom
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00001793 vs. Swiss-Prot (Human)
Match: JIP1 (C-Jun-amino-terminal kinase-interacting protein 1 OS=Homo sapiens GN=MAPK8IP1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 6.419e-56
Identity = 100/253 (39.53%), Postives = 154/253 (60.87%), Query Frame = 3 
Query:  567 IVNTNNFDKQTHIALYKFHARHKDEISFNDGDPIQVLKCFEDLWYEGINLLTSKQGVFPSRYVADIL-SAEMITSIEDDSDH-RQFHMRFLGSVEVNNHKGDEILCFAIAKVVNQRSMLSSSNPPT-CVLQVSSKGLRICNLDDNTSVNQDQTQVGAERKPKKGKQVDITANEEGDVAHFFSLKNVTYCGNHPKDRRYFGFITKHPDDHRFACHIFMSKFSTDNIAKLIGDCFKKYYSTYLDYRAPIEDLYIE 1316
            I+N     +QTH A+++F  RH+DE+     DP+ V    ED WYE  N+ T  +GVFP+ Y  ++    E + ++  +SD   QF ++FLGSV+V  HKG+++LC A+ K+   R +    NPP+ CVL++S +G++I        V  D +Q        KG +           +HFF LKN+++CG HPK+ +YFGFITKHP DHRFACH+F+S+ ST  +A+ +G  F+++Y  +++Y  P ED+Y+E
Sbjct:  483 IINGEE-QEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKI-------GVKADDSQEA------KGNKC----------SHFFQLKNISFCGYHPKNNKYFGFITKHPADHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 711
The following BLAST results are available for this feature:
BLAST of TCONS_00001793 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
JIP16.419e-5639.53C-Jun-amino-terminal kinase-interacting protein 1 ... [more]
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