TCONS_00001793 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001793
Unique NameTCONS_00001793
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1791

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001793 ID=TCONS_00001793|Name=TCONS_00001793|organism=Clytia hemisphaerica|type=transcript|length=1791bp
CTTATTTGTGAATGAAATGACAAATGaaaaaaaaaagaatgctGAATCCA
GCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAATGAAGACATTAA
AAAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAAGTCGAAAAGTG
GGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTAAACTTGGAAAA
AGAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAAGCAAGCTTGAG
TAAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGACGATGAGAATA
AAAGTGCAACGATTATGGGAAAATATAAGTATAATTCATTGCCAAGGAAA
AATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACTTTTTATTTGGA
CAGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACTTGATCGTAAAG
ACATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCACCATTAATGCTA
AAGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTGAAAAAGGACTT
ATCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGATAAACAAACAC
ATATAGCTTTATATAAATTTCACGCAAGACATAAAGATGAAATTTCATTT
AATGATGGTGATCCGATACaagttttgaaatgttttgaagATTTGTGGTA
TGAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTTTCCATCACGTT
ATGTTGCTGATATACTTTCTGCAGAAATGATAACATCTATTGAAGACGAT
TCTGACCATAGACAATTTCACATGAGattcTTAGGGTCAGTAGAAGTGAA
CAATCACAAAGGAGATGAAATATTATGTTTTGCCATCGCTAAGGTGGTAA
ACCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGTGTGTATTGCAA
GTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGATAACACTTCAGT
CAACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCCAAAGAAAGGAA
AGCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGGCGCATTTCTTT
TCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATAGACGGTA
TTTTGGGTTCATAACAAAACATCCAGATGACCATCGGTTTGCTTGTCATA
TTTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGCTCATTGGgGAT
TGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTCCAATCGA
AGATTTGTATATTGAATAgaatgatttatttttcatgatttttcataCGT
CTCGACTGTTACCCTTGAAAATTACAACAAAGCGATTATACCTACGTATA
tctaattgaaaaaattgatcgGCTCTAATTGTGTAATACAAGACTCTTAT
ATAACAAAAAGGTTTGCgattgattgatattttttctctATGAGCGGTTC
TTGCAAAGAAGACGCTTGGTTCAGAcgaatttatattttttcacttttct
tatATCGGTTAAGTTTAGGGGTTTAGGGTACAAACTAATTGTAAATAAAG
TCTATTATGTAcctagaatttaaaaaatacgATTAATTgcctattgtttc
atttttgtttgtttttttttctacaaatttatataaatgataatattttt
caatgcacaattcttttttgtttttgttgacaCTTTGTATACTTTATAAA
tattataattaaaaaaaacaaatatcacCAGACCTTTGAAC
Run BLAST on NCBI

protein sequence of TCONS_00001793-protein

>TCONS_00001793-protein ID=TCONS_00001793-protein|Name=TCONS_00001793-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MKKKRMLNPAAEAIQREKTDSNEDIKKIPHSKVEKKTSKSKSGDSNGVLR
KIKSPKLGKRMLPDAPSLKPAKASLSKSSDDLLSVNKTDDENKSATIMGK
YKYNSLPRKNKKEKSRNGSMSTFYLDSNSTGKVSKSPKLDRKDISSSNQS
SLNNSPLMLKKKVSHTGSNPDLKKDLSSKVEIVNTNNFDKQTHIALYKFH
ARHKDEISFNDGDPIQVLKCFEDLWYEGINLLTSKQGVFPSRYVADILSA
EMITSIEDDSDHRQFHMRFLGSVEVNNHKGDEILCFAIAKVVNQRSMLSS
SNPPTCVLQVSSKGLRICNLDDNTSVNQDQTQVGAERKPKKGKQVDITAN
EEGDVAHFFSLKNVTYCGNHPKDRRYFGFITKHPDDHRFACHIFMSKFST
DNIAKLIGDCFKKYYSTYLDYRAPIEDLYIE
Run BLAST on NCBI

transcript from alignment at sc0000012:619106..629400+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001793 ID=TCONS_00001793|Name=TCONS_00001793|organism=Clytia hemisphaerica|type=transcript|length=10295bp|location=Sequence derived from alignment at sc0000012:619106..629400+ (Clytia hemisphaerica)
CTTATTTGTGAATGAAATGACAAATGGTATGAGTTCAGATTTAAATCGAT TTATATATGGTATGGATAGATGCATGAggccttttttgtttttatggtAG ATAAAGCCTTGACACTCTACttaattattcttttatttttgttttttatt tcatttcattgGTTAGCTCTTAAAGAAAGAATGCAATGTGTGAGAGTTTT AATTGTTTATTTTGGCATAGTTGTTTGTTTGGTAGTAGCtatagctctaa agctctaataTAAAAGAGCATATTTTATGAAAGCCagcgaatagaccttt tttcaaagaggaggtcccctgttgaataattatgtagtccagccataaaa acaatgatagagccatgcataattactgtatcatgtatattgtaataatt atgcatggttttgtCATTGTTTTtctctgctggactacataattattcaa cagggtggcctctttgaaaaaaggtctataccgTGAAgatgggtaacttg catcagtggagggaaacttgcatagccatcaaatgactgaccaaccaaag tagcaaaatttcaaaacaaatcaactacgcagctccgctcgcagctctac tcttctaccattttgttttttgatttaactttgtattttttaataaccag ccaggtcattcatttgagggctatgcaagtttccctccactgatgctaGT TACCCCACTTCACGGTATTATTCTTCAATCCAGACGGTACCGTCAACTga tctaacttgggacgattggtcatgggactggttgatatctggcctgtata tTTTCACACTGTtaaaaatctctttgacaacaaatttgttttgataactc caccaagtttatcaatcatactttctgtcataacatgtcacgataacttt ctcTAATAGCgtgcttttttaatttttttgttttcattcaaaatgaccgg acgccaatttggagaattagagaacgtctGCCGTCTAACCACCTATTGCT CGATaagattaacaaataacgagtgtgtaacttgccgggcaagtgacgtc aaacactccatcgttttgccactaatttgttcttcttcattCCAGACATT TGCGTGTTTTCCActgcagatttttttcatatttcgatttaaaagcgcag cctactcggtgcaaaagagaaatcttgtattttttaatatgccattcaat aactcaaatcaaatgactttggagattcgatgaaatggtggccaaattgc cgtcccatttttgtcagatagtccaaaGTTAGAGCAGTTCACATAACCAA TCGAACGTTTgattgtgatcgaagtaatggataatgatcgataataatCA AGAAGGTGGTCAGTGACCACATATCGATTTTATCGGTGATTGAAATGCTC ACTCAACTCAagattatggcattttcttctACCATTTTCGATTCGTTCAA TCATTTTGATTACTCTTCGATTACcttcgatcatattgaatacctttgAT TGTATCAAATAccttcgattttatcaaatatgtttcctGTTGTGCGATAA ACCACTTTTGTTTTATCTGATCAATCAGATTCAGAATGCGCGATATGAGT TATTTGAGGGAACCCAGGGCAAacagtctaagcttaaactcctataccag gattagaaactaggctagtcttacctcttcagacctcttttatctttccc tttacaacaatacaatgctggcaagttgacacaacacattgacctGTGAG AAAAGTTTAtatatagaaatctgcaacaaaaacgaaagtggtctcttcta ctgattgttTTCCGGTGCTCCTTCGTaactgtttatcaaatttccaccaa taagATTGCCGCATTTCACACAGCCTTTCCTTTTAGCGCtcgtggcctct cagtgccttgcacgacaggCCATAATCCGTGATCTTAAGGTTTAGGTTTT TTACCACCTTCAATTTACtaaagaaagcgggaatttgatgcaagagttag attaTCAACAAAGTGcagtaaaaaatcattgaataaaagaagaactttaa attttaaatatttttattttgaagaattggtgcaaaaaagtgaaacatgg aaaagtttcattttttattggttcaatcTAAATAGgagatttggaaaact ttctatttttGGTTTTTAGCACAAACCTGTAACTATGGGACAAGCACCCC ACTGCTAAGATGTTAGctcaaaatcgaaagtgaaaccactgaaaatgaaa gtaaaattggcCCGCACTCCAAATAatgtaatcttgatataggagtttaa gcatAGACTGGCAAAtatttccagatctggaaatcTGGATTTTTCTATAC CAACCGCTAGCTGGGGAAGATGTGCTCCCTAGCAATGGAATTTTCAGAGC TTTTGGCTTACTAGGGATGCTCCCGATCATTGAAAGGTGCTTTTCTTGAA AGCGGACCCGAATAAAATTCACAAATAAAGATCATCCCTTTGATAAATTC TAGAAAGCAAGCACAAGAGTATTTCATAATTCTGTGAGTATTGGTTTGAT AGCTCTGATTCATTCTGGCCTGTACTTGCTGCGCTAATTTGAGAATACCG GCAtttttgtcacaacagtggaGCTCATAGTGTCCTAGTAGGTTGGTTCC CCTACcttgaaaattgataaaaatcctCCTGCTCCCTTTTAGTTCCCCTC CCTAAGCCTAAGGTTTTTAGAATGATTCCCCCCCcccttgaattttttct tttgattttttgctcataACATAATATATACTACTTCTATTCATGTTATA TCATCCctatatacaaagaaaaaatgtaaattgtCACCACCTCGAATATA AAACACTATTACATGTTTTTAGCTTGAAGTTGAACagatatattttatgt tttatgtttGACACCAGAGAACAGAAAATtcttttcctcagattttttct CCCCACCCTTGActttttggagtttttttttcCTCCTTTTGATTCCCCCC Ctctagaattttgaaaatgattttgcccacctttttcccattttctgaaa aaaaactatGAGCTGCACTAGAGAACTAGTTTAATGACCTCAAACAGGTC TCACCAATCCACTAAGTTCATTGCGAAGAAACAAGGCTGCCCTTGCTGGA CACTTCACTTTTAGCATTGTATCACACACTGATCAAATACATCCTTATAT TGTTTTAGTTTGCATTTACTTAACTCAAACACTTTTCaccaaaaaataat ttgaatctttttctCTCGCATGCGTAATATTGATTAGGGAAGTTTTTAAA AAGGATACACTCGAATTAACAAATGGCATTTCCCAATCCGAGAAATTTTA TTTCCTTAGTTTtcagggggggtcggtactaaaatccaagACATATAGAG TACTACAaggttttttgacgatttttgacatacccccacctaatttttga aaaaggaattttagtacacatgtactaaaatttattttgacattttagca taGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNttagtacacatggtactaaaatgcttttaggc tttttttgtaataccaccacgtcactaaaagtcatgatgtctgaaatttt agtaccgacccccccccctgtagtTTTTGAAATTACATTTCCTGATTCAG AAAGAAATTATGGAATAAAGCAAGTGAATTcatgaatttaaggtcataat ataAATATAGTTTGTGAAATTTACTTTCCCTAGCATGTAGAGAGTAATAA TGTAAAAAGTTTGTGATCTCTCTTTTCCCTCTTTTCCCGTCATTAGGATT TTTACTTGAGTgtgtaaagccttaaaaaccAATGTGCTGTCTTGGTAATA GAGTGGTTGGTTGATTAGTTTGCCGTGGCACATTAAACAATCAATCCTTT TATTGCGTTTAAAGTTtccaataaaatttcatttttatgaacCTAATGAT GGTATGAGCACCGAAAAGCTTTGACACaaataaaaattgtttcttcaatt ctaaaatttttattaatgaatgataatgtttttctaaaaccTAGATTTCC TGTGTGACTTAACTGTCTAGTAGGGTTTTCACAAACACAAAAATGTCATA CTAATAACTTTAACAAGGTAATAATATTGCTTTTCCATtttctgtagaaa aaaaaaagaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAAC TGACAGTAATGAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAAGA AGACTTCTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATC AAGAGTCCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTAAA ACCTGCTAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTA ATAAAACAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAATATAAG TATAATTCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAG CATGTCAACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAAT CACCAAAACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTT AATAATTCACCATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGTAA TCCAGATTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATACAA ACAACTTTGATAAACAAACACATATAGCTTTATATAAATTTCACGCAAGA CATAAAGATGAAATTTCATTTAATGATGGTGATCCGATACaagttttgaa atgttttgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAAAC AAGGTGTTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAATG ATAACATGTAAGGAAGCTTCTTTTTTGAATTAAGATGATAACATTTTACT GTAGACCAGCGTCCAAGGCGAGATTCAGAAAACACCTTTAAAAacggttt tcgtagggcactctttagatcagggcaaattttcaGTCTCTAGATCATGA GATAATTAATGTTTAAAGAAGGCAAATATGCCAAAATACTGCTGACTCCA TAGTGTGAACCCCCCTTTTTTTTAGGGGAGGGGTCCAACTTTTCCAAAAA TGCTTTATAGGGAGGGGATAGGAGATTTACCAAAAAAAATGGGGGGTTTA AaattttaggggggggggggtcaagatTTTAGGGGGGGTCAAGTAAAAAT AGGAGGGACTACaacttttggtcaaaatatctatcaTATTTATATGTATT ATTAAAGGTTCAGCGATTCTTCAAGAGTGCTTGCTCTACAAGGTGAAGGA GCGTGATacaattttcagaagaaaatacACAATTTGCTTCAcagtacttt aagtttcatgttcTAACTTGGGTttagacccctctgcacactatgatcag caaaaaatttcaataatttttaatatttaaatcaaaatatgcttTCAGTA AAATGTTGACGTCATAAGGAAAACATTCTAAACGTCATTTTTTTGTctca aaaatgccatttcttgGCACCAGGTAGTCGAATagtaacaaataacccca ttttctttatcctCTTTTCGCACTGAATCTGATTGTAGCTTGtagtttga ttttcaaaaatcgctAGTAAAGGCCCTTTATAAGTTCCATTGATTAACTA AAAATGGATTCACTCGAAACTACATCAGATTCTAGAGGCAAATTTTTTGT TGAACTTACACCCTATTAAGAGCattatatcaaaaatttgccctgatgtA GGAGTGCCCTAAGAAGTGACACACTTCACTACCTCGACGGCTGGTCTACT GGATGCCCACTGGATGAAAACGCTTAAATGTTTTTCATATATGAAacatg tttataaggaacttgaggctgaaaatgttATCTATAATTTGAATTAATTC TCAGCACTGTaaagaagaaataatttttactgTATGATTCAAACCTTTAA ATATTAGATTCAATTTGAATAAAGTAGGAATTCTTTGCACTATTACCGAT CTTGTTTAAGATTCTAGCGACCGTGGTGCAAAGGTCGAGCATTCAGAGAA GTCATACCAAATATTGCAAAACGGTACTTGATACTTAATATTCAGTAATT TTTAAATAGAGGATCAAGGGTAACTAGAGTATCAAGGGTAACTATAGTAA TCTCTTGAAAGAGCAGCTGTTGAGTTGCCTGCCTGCTGCCACAGACTTTT GTTTAAGAAAAGTTTTCCTTATCACTTTCAGCTATTGAAGACGATTCTGA CCATAGACAATTTCACATGAGGTAATTCAATCTATCTTTCGTTATTCAAG TTTAAAGAAGactgtacaaaaattcagaaaacctGTATGTTTACTCGTAA GagtgaaagatttttaaaatctaTGCCCCTTTTTGGCCCCAAGATAGATC CCATGGTGTGGAGAATGGCGAACATTTGGACTAAAGCTATAAAGGCGATT CCAGCTACCTTTTAGGTATTTGATTGGTAGCCAACTTACAAAAAGATTAC TGAATGTTCCTATGACGGAATAAGTCATACAGAAAGATTTTGTGAAGAga actaaaaaaaaacttaatatttcttgttttgctttttcatttttagattc TTAGGGTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATATTATGTTT TGCCATCGCTAAGGTAAAGCACAGCATAATTTCATGAActggcttcaaat tatttgcATTGTCTAAATCTATCAATAATGTTAATATATATTGTGGTGAC AGTGCTCCATGCGTTAATGTAGAGCCAATATCCATTTagaacaaaattat attggttTCAGATCTGAGTGATAAATATCAGTAATACTGTACAATAAATT AGGTTTTGTACTGCTAGCTTCTTTATCAGATGCCTTTCTGAAGCTACCAT AGATGATAGTAAACCAtgatatataagaacatcatgGTTTCAAGACCAGA AATTTGACAACATTTCACTgcatttcaaggttttttggactcactaaatt ataaaaataagaaCCTATAATATAAGCCTATAACCAGAAcagtaaagaaa tttttgacgTTGTTATAAAAAGATGTATAtgggtttctttttttctcttc ctGGTTAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCT ACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGA TGATAACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAA AGCCAAAGAAAGGAAAGCAAGTCGATATTACGGTGAGAAGTATTTAAGTT CTTACTGACTGTTTTAGAATATTTTCATACTGTTAATTTCATTGCCCGGT ATTACAGTAGGTATGCACGTGGACTCATTCGACTCGAAACCATTTCTTTT GTGAAAATAGAATTGGAGGTATCAAAAAAGGCTTTTCAGCTATTTACTAT TAATAGCCCTATCCAAGTGGTGTAATTGAAGATGCTCAATTTGGACaaat tatcatattttttgGAAGACCTACGAAAAGATAGTTTTACTGTGCTGCGT CGCTAACCTACCAAATAATTCAATGGTTTTTCACATAtttgtcaatttta ttttctatctaTATTATGCAGGCAAATGAAGAAGGAGATGTGGCGCATTT CTTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATAGAC GGTAAGGTTCATCTTCTGTagattgaaatttattttttcaaaggttgTTG TCTCGTATCTAGTAAAGAAAACAAATGGACAGCCTATATTATCTGTTCCT GTTCACTCGAAAAGTATCATTTTGCAATAAATCTACTGTTATTGATAATG TGTAAATAATTTTCTAACGGAGACCAGAAAAAAAGCATGGTGgtcaaaat ccggctttttGCTTGAGTtagaaaatatgacgtcatcttcatTTACGAAT ACGCCAACGTACCAATGCAAAACGAGTAAGAAGCTCATTATATCCAACTG TTATTTTCATATCCATATTTTCGTAGGTATTTTGGGTTCATAACAAAACA TCCAGATGACCATCGGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTA CTGACAACATCGCTAAGCTCATTGGGTGAGTGATTTTCTTCCCGTTTGGG TATTTTGTTGAAATTATCTGATCCTGTTTTAAATCTTTGGTAGCTCAgta atttaaggctttttgacaATCTTTTCGACTGCTAATAGGGGTCAAGTTCA ACTGGCTATATGCATATTGTGAACTGAGGGAGTTATGAAATTGAGTAACG TTTCGAATTCTTTTATGAATGTATCTATGAACTTTTGTGACAAAACACCC GAATGGCCAGCCCTGTTGAAATTATTGAGACAGTGGAGTATAAAGTTTAT CTACATTTAGGAAAACTCCTCAAAGCTTTTACGAGTTTAATTCATTTTGA GCCCTCATTTTTTCCACTTTAACGGTTATCGAGCTCTTACATATCCACTG ggtacattttattttcaaggggTTCTTTTAGATGATTTTTTAAGGATTAA aacacgtgtccagggggtgaaaaataaaaatgtttaggGGTAAGTTATTG AAAGAATAATACATACTTCATCcccctaaaaaaatatttttttggaagaG CCAATTCTGATAAAAAGATTACAAAGTATAACTTTAATTAATCGAGGGGt aaaatcactcgaaaaattatcgtacacctctacaaaaagtcaaagaaaaa gtcaaacaGAGTCAAACAGTCAaaaattctgagaaaaaaagtcaaaaagt caaataaaagtcaaaaaaagtcttgaaaaagtcaaaaagtttcttgaatg ggtggatgggtggagcaaaatttatgggcggTGGGTGTTTCGGAAAGATT TCGGTGGAAAATTTTGGGCGCCCGAGGACGCTGGGCGTTTTTGTTGAGAA AAAGTCGAaacgaaagtttgaaaaaagtcaaataaaagtaaaaaaagagt ttaaaagtcaaaaagtatcgtacacctttttacaagtgatttacccctcg caaTTAATTATAATGATAGtgatgtaaatttttttgttttcattttccag gGATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTCCAA TCGAAGATTTGTATATTGAATAgaatgatttatttttcatgatttttcat aCGTCTCGACTGTTACCCTTGAAAATTACAACAAAGCGATTATACCTACG TATAtctaattgaaaaaattgatcgGCTCTAATTGTGTAATACAAGACTC TTATATAACAAAAAGGTTTGCgattgattgatattttttctctATGAGCG GTTCTTGCAAAGAAGACGCTTGGTTCAGAcgaatttatattttttcactt ttcttatATCGGTTAAGTTTAGGGGTTTAGGGTACAAACTAATTGTAAAT AAAGTCTATTATGTAcctagaatttaaaaaatacgATTAATTgcctattg tttcatttttgtttgtttttttttctacaaatttatataaatgataatat ttttcaatgcacaattcttttttgtttttgttgacaCTTTGTATACTTTA TAAAtattataattaaaaaaaacaaatatcacCAGACCTTTGAAC

Coding sequence (CDS) from alignment at sc0000012:619106..629400+

>TCONS_00001793 ID=TCONS_00001793|Name=TCONS_00001793|organism=Clytia hemisphaerica|type=CDS|length=10368bp|location=Sequence derived from alignment at sc0000012:619106..629400+ (Clytia hemisphaerica)
ATGaaaaaaaaaagaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGA
GAAAACTGACAGTAATGAAGACATTAAAAAGATACCACACTCGAAAGTTG
AAAAGAAGACTTCTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGG
AAGATCAAGAGTCCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATC
CTTAAAACCTGCTAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTAT
CAGTTAATAAAACAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAA
TATAAGTATAATTCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAA
TGGTAGCATGTCAACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTT
CAAAATCACCAAAACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGT
TCACTTAATAATTCACCATTAATGCTAAAGAAGAAAGTATCACACACTGG
TAGTAATCCAGATTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAA
ATACAAACAACTTTGATAAACAAACACATATAGCTTTATATAAATTTCAC
GCAAGACATAAAGATGAAATTTCATTTAATGATGGTGATCCGATACaagt
tttgaaatgttttgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAA
GCAAACAAGGTGTTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCA
GAAATGATAACATCTATTGAAGACGATTCTGACCATAGACAATTTCACAT
GAGattcTTAGGGTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATAT
TATGTTTTGCCATCGCTAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCA
TCAAATCCACCTACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGAT
ATGTAATTTGGATGATAACACTTCAGTCAACCAAGATCAAACACAAGTTG
GAGCTGAACGAAAGCCAAAGAAAGGAAAGCAAGTCGATATTACGGCAAAT
GAAGAAGGAGATGTGGCGCATTTCTTTTCACTGAAAAACGTCACGTACTG
TGGAAACCACCCCAAAGATAGACGGTATTTTGGGTTCATAACAAAACATC
CAGATGACCATCGGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTACT
GACAACATCGCTAAGCTCATTGGgGATTGTTTCAAGAAGTATTACAGTAC
GTATCTGGATTACAGAGCTCCAATCGAAGATTTGTATATTGAATAgATGa
aaaaaaaaagaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAA
ACTGACAGTAATGAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAA
GAAGACTTCTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGA
TCAAGAGTCCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTA
AAACCTGCTAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGT
TAATAAAACAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAATATA
AGTATAATTCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGT
AGCATGTCAACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAA
ATCACCAAAACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCAC
TTAATAATTCACCATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGT
AATCCAGATTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATAC
AAACAACTTTGATAAACAAACACATATAGCTTTATATAAATTTCACGCAA
GACATAAAGATGAAATTTCATTTAATGATGGTGATCCGATACaagttttg
aaatgttttgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAA
ACAAGGTGTTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAA
TGATAACATCTATTGAAGACGATTCTGACCATAGACAATTTCACATGAGa
ttcTTAGGGTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATATTATG
TTTTGCCATCGCTAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAA
ATCCACCTACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGT
AATTTGGATGATAACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGC
TGAACGAAAGCCAAAGAAAGGAAAGCAAGTCGATATTACGGCAAATGAAG
AAGGAGATGTGGCGCATTTCTTTTCACTGAAAAACGTCACGTACTGTGGA
AACCACCCCAAAGATAGACGGTATTTTGGGTTCATAACAAAACATCCAGA
TGACCATCGGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTACTGACA
ACATCGCTAAGCTCATTGGgGATTGTTTCAAGAAGTATTACAGTACGTAT
CTGGATTACAGAGCTCCAATCGAAGATTTGTATATTGAATAgATGaaaaa
aaaaagaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTG
ACAGTAATGAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAAGAAG
ACTTCTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATCAA
GAGTCCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTAAAAC
CTGCTAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTAAT
AAAACAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAATATAAGTA
TAATTCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCA
TGTCAACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAATCA
CCAAAACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTTAA
TAATTCACCATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGTAATC
CAGATTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATACAAAC
AACTTTGATAAACAAACACATATAGCTTTATATAAATTTCACGCAAGACA
TAAAGATGAAATTTCATTTAATGATGGTGATCCGATACaagttttgaaat
gttttgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAAACAA
GGTGTTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAATGAT
AACATCTATTGAAGACGATTCTGACCATAGACAATTTCACATGAGattcT
TAGGGTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATATTATGTTTT
GCCATCGCTAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCC
ACCTACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATT
TGGATGATAACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAA
CGAAAGCCAAAGAAAGGAAAGCAAGTCGATATTACGGCAAATGAAGAAGG
AGATGTGGCGCATTTCTTTTCACTGAAAAACGTCACGTACTGTGGAAACC
ACCCCAAAGATAGACGGTATTTTGGGTTCATAACAAAACATCCAGATGAC
CATCGGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTACTGACAACAT
CGCTAAGCTCATTGGgGATTGTTTCAAGAAGTATTACAGTACGTATCTGG
ATTACAGAGCTCCAATCGAAGATTTGTATATTGAATAgATGaaaaaaaaa
agaatgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAG
TAATGAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAAGAAGACTT
CTAAGTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGT
CCTAAACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTAAAACCTGC
TAAAGCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTAATAAAA
CAGACGATGAGAATAAAAGTGCAACGATTATGGGAAAATATAAGTATAAT
TCATTGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTC
AACTTTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAATCACCAA
AACTTGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTTAATAAT
TCACCATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGTAATCCAGA
TTTGAAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATACAAACAACT
TTGATAAACAAACACATATAGCTTTATATAAATTTCACGCAAGACATAAA
GATGAAATTTCATTTAATGATGGTGATCCGATACaagttttgaaatgttt
tgaagATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAAACAAGGTG
TTTTTCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAATGATAACA
TCTATTGAAGACGATTCTGACCATAGACAATTTCACATGAGattcTTAGG
GTCAGTAGAAGTGAACAATCACAAAGGAGATGAAATATTATGTTTTGCCA
TCGCTAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCT
ACGTGTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGA
TGATAACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAA
AGCCAAAGAAAGGAAAGCAAGTCGATATTACGGCAAATGAAGAAGGAGAT
GTGGCGCATTTCTTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCC
CAAAGATAGACGGTATTTTGGGTTCATAACAAAACATCCAGATGACCATC
GGTTTGCTTGTCATATTTTTATGTCCAAATTCTCTACTGACAACATCGCT
AAGCTCATTGGgGATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTA
CAGAGCTCCAATCGAAGATTTGTATATTGAATAgATGaaaaaaaaaagaa
tgctGAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAAT
GAAGACATTAAAAAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAA
GTCGAAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTA
AACTTGGAAAAAGAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAA
GCAAGCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGA
CGATGAGAATAAAAGTGCAACGATTATGGGAAAATATAAGTATAATTCAT
TGCCAAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACT
TTTTATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACT
TGATCGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCAC
CATTAATGCTAAAGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTG
AAAAAGGACTTATCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGA
TAAACAAACACATATAGCTTTATATAAATTTCACGCAAGACATAAAGATG
AAATTTCATTTAATGATGGTGATCCGATACaagttttgaaatgttttgaa
gATTTGTGGTATGAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTT
TCCATCACGTTATGTTGCTGATATACTTTCTGCAGAAATGATAACATCTA
TTGAAGACGATTCTGACCATAGACAATTTCACATGAGattcTTAGGGTCA
GTAGAAGTGAACAATCACAAAGGAGATGAAATATTATGTTTTGCCATCGC
TAAGGTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGT
GTGTATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGAT
AACACTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCC
AAAGAAAGGAAAGCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGG
CGCATTTCTTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAA
GATAGACGGTATTTTGGGTTCATAACAAAACATCCAGATGACCATCGGTT
TGCTTGTCATATTTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGC
TCATTGGgGATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGA
GCTCCAATCGAAGATTTGTATATTGAATAgATGaaaaaaaaaagaatgct
GAATCCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAATGAAG
ACATTAAAAAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAAGTCG
AAAAGTGGGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTAAACT
TGGAAAAAGAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAAGCAA
GCTTGAGTAAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGACGAT
GAGAATAAAAGTGCAACGATTATGGGAAAATATAAGTATAATTCATTGCC
AAGGAAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACTTTTT
ATTTGGACAGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACTTGAT
CGTAAAGACATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCACCATT
AATGCTAAAGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTGAAAA
AGGACTTATCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGATAAA
CAAACACATATAGCTTTATATAAATTTCACGCAAGACATAAAGATGAAAT
TTCATTTAATGATGGTGATCCGATACaagttttgaaatgttttgaagATT
TGTGGTATGAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTTTCCA
TCACGTTATGTTGCTGATATACTTTCTGCAGAAATGATAACATCTATTGA
AGACGATTCTGACCATAGACAATTTCACATGAGattcTTAGGGTCAGTAG
AAGTGAACAATCACAAAGGAGATGAAATATTATGTTTTGCCATCGCTAAG
GTGGTAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGTGTGT
ATTGCAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGATAACA
CTTCAGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCCAAAG
AAAGGAAAGCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGGCGCA
TTTCTTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATA
GACGGTATTTTGGGTTCATAACAAAACATCCAGATGACCATCGGTTTGCT
TGTCATATTTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGCTCAT
TGGgGATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTC
CAATCGAAGATTTGTATATTGAATAgATGaaaaaaaaaagaatgctGAAT
CCAGCAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAATGAAGACAT
TAAAAAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAAGTCGAAAA
GTGGGGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTAAACTTGGA
AAAAGAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAAGCAAGCTT
GAGTAAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGACGATGAGA
ATAAAAGTGCAACGATTATGGGAAAATATAAGTATAATTCATTGCCAAGG
AAAAATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACTTTTTATTT
GGACAGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACTTGATCGTA
AAGACATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCACCATTAATG
CTAAAGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTGAAAAAGGA
CTTATCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGATAAACAAA
CACATATAGCTTTATATAAATTTCACGCAAGACATAAAGATGAAATTTCA
TTTAATGATGGTGATCCGATACaagttttgaaatgttttgaagATTTGTG
GTATGAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTTTCCATCAC
GTTATGTTGCTGATATACTTTCTGCAGAAATGATAACATCTATTGAAGAC
GATTCTGACCATAGACAATTTCACATGAGattcTTAGGGTCAGTAGAAGT
GAACAATCACAAAGGAGATGAAATATTATGTTTTGCCATCGCTAAGGTGG
TAAACCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGTGTGTATTG
CAAGTTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGATAACACTTC
AGTCAACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCCAAAGAAAG
GAAAGCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGGCGCATTTC
TTTTCACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATAGACG
GTATTTTGGGTTCATAACAAAACATCCAGATGACCATCGGTTTGCTTGTC
ATATTTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGCTCATTGGg
GATTGTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTCCAAT
CGAAGATTTGTATATTGAATAgATGaaaaaaaaaagaatgctGAATCCAG
CAGCAGAAGCAATCCAGAGGGAGAAAACTGACAGTAATGAAGACATTAAA
AAGATACCACACTCGAAAGTTGAAAAGAAGACTTCTAAGTCGAAAAGTGG
GGACAGTAATGGCGTTCTTAGGAAGATCAAGAGTCCTAAACTTGGAAAAA
GAATGTTACCAGATGCACCATCCTTAAAACCTGCTAAAGCAAGCTTGAGT
AAAAGCTCTGATGACTTGTTATCAGTTAATAAAACAGACGATGAGAATAA
AAGTGCAACGATTATGGGAAAATATAAGTATAATTCATTGCCAAGGAAAA
ATAAGAAAGAGAAGTCTAGAAATGGTAGCATGTCAACTTTTTATTTGGAC
AGTAACTCAACGGGAAAGGTTTCAAAATCACCAAAACTTGATCGTAAAGA
CATCAGTTCTTCAAATCAAAGTTCACTTAATAATTCACCATTAATGCTAA
AGAAGAAAGTATCACACACTGGTAGTAATCCAGATTTGAAAAAGGACTTA
TCAAGTAAAGTTGAAATTGTAAATACAAACAACTTTGATAAACAAACACA
TATAGCTTTATATAAATTTCACGCAAGACATAAAGATGAAATTTCATTTA
ATGATGGTGATCCGATACaagttttgaaatgttttgaagATTTGTGGTAT
GAAGGAATTAATTTGTTGACAAGCAAACAAGGTGTTTTTCCATCACGTTA
TGTTGCTGATATACTTTCTGCAGAAATGATAACATCTATTGAAGACGATT
CTGACCATAGACAATTTCACATGAGattcTTAGGGTCAGTAGAAGTGAAC
AATCACAAAGGAGATGAAATATTATGTTTTGCCATCGCTAAGGTGGTAAA
CCAGCGAAGCATGCTCTCTTCATCAAATCCACCTACGTGTGTATTGCAAG
TTAGCTCCAAAGGGCTAAGGATATGTAATTTGGATGATAACACTTCAGTC
AACCAAGATCAAACACAAGTTGGAGCTGAACGAAAGCCAAAGAAAGGAAA
GCAAGTCGATATTACGGCAAATGAAGAAGGAGATGTGGCGCATTTCTTTT
CACTGAAAAACGTCACGTACTGTGGAAACCACCCCAAAGATAGACGGTAT
TTTGGGTTCATAACAAAACATCCAGATGACCATCGGTTTGCTTGTCATAT
TTTTATGTCCAAATTCTCTACTGACAACATCGCTAAGCTCATTGGgGATT
GTTTCAAGAAGTATTACAGTACGTATCTGGATTACAGAGCTCCAATCGAA
GATTTGTATATTGAATAg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000963XLOC_000963Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001793-exon-sc0000012-1491911889:619106..619131TCONS_00001793-exon-sc0000012-1491911889:619106..619131Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:619106..619131TCONS_00001793-exon-sc0000012-1510915933:619106..619131Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:619106..619131TCONS_00001793-exon-sc0000012-1575043694:619106..619131Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:623853..624612TCONS_00001793-exon-sc0000012-1491911889:623853..624612Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:623853..624612TCONS_00001793-exon-sc0000012-1510915933:623853..624612Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:623853..624612TCONS_00001793-exon-sc0000012-1575043694:623853..624612Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:625987..626026TCONS_00001793-exon-sc0000012-1491911889:625987..626026Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:625987..626026TCONS_00001793-exon-sc0000012-1510915933:625987..626026Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:625987..626026TCONS_00001793-exon-sc0000012-1575043694:625987..626026Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:626352..626418TCONS_00001793-exon-sc0000012-1491911889:626352..626418Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:626352..626418TCONS_00001793-exon-sc0000012-1510915933:626352..626418Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:626352..626418TCONS_00001793-exon-sc0000012-1575043694:626352..626418Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:626864..627037TCONS_00001793-exon-sc0000012-1491911889:626864..627037Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:626864..627037TCONS_00001793-exon-sc0000012-1510915933:626864..627037Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:626864..627037TCONS_00001793-exon-sc0000012-1575043694:626864..627037Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:627377..627456TCONS_00001793-exon-sc0000012-1491911889:627377..627456Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:627377..627456TCONS_00001793-exon-sc0000012-1510915933:627377..627456Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:627377..627456TCONS_00001793-exon-sc0000012-1575043694:627377..627456Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:627782..627880TCONS_00001793-exon-sc0000012-1491911889:627782..627880Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:627782..627880TCONS_00001793-exon-sc0000012-1510915933:627782..627880Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:627782..627880TCONS_00001793-exon-sc0000012-1575043694:627782..627880Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1491911889:628856..629400TCONS_00001793-exon-sc0000012-1491911889:628856..629400Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1510915933:628856..629400TCONS_00001793-exon-sc0000012-1510915933:628856..629400Clytia hemisphaericaexon
TCONS_00001793-exon-sc0000012-1575043694:628856..629400TCONS_00001793-exon-sc0000012-1575043694:628856..629400Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001793-proteinTCONS_00001793-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:619106..629400 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.647 27.1829 5.66236 3.77596 3.2662 2.27032 5.10327 4.91258 7.23788 5.71156 5.95275 3.95791 7.14416 6.00978 6.72363 7.07883 7.89563 6.66057 9.01122 11.101 11.2316 9.89915 23.2189 23.7042 7.34369 7.58553 10.7626 9.25456 13.5656 13.314
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR006020PTB/PI_dom
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
BLAST of TCONS_00001793 vs. Swiss-Prot (Human)
Match: JIP1 (C-Jun-amino-terminal kinase-interacting protein 1 OS=Homo sapiens GN=MAPK8IP1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 6.419e-56
Identity = 100/253 (39.53%), Postives = 154/253 (60.87%), Query Frame = 3
Query:  567 IVNTNNFDKQTHIALYKFHARHKDEISFNDGDPIQVLKCFEDLWYEGINLLTSKQGVFPSRYVADIL-SAEMITSIEDDSDH-RQFHMRFLGSVEVNNHKGDEILCFAIAKVVNQRSMLSSSNPPT-CVLQVSSKGLRICNLDDNTSVNQDQTQVGAERKPKKGKQVDITANEEGDVAHFFSLKNVTYCGNHPKDRRYFGFITKHPDDHRFACHIFMSKFSTDNIAKLIGDCFKKYYSTYLDYRAPIEDLYIE 1316
            I+N     +QTH A+++F  RH+DE+     DP+ V    ED WYE  N+ T  +GVFP+ Y  ++    E + ++  +SD   QF ++FLGSV+V  HKG+++LC A+ K+   R +    NPP+ CVL++S +G++I        V  D +Q        KG +           +HFF LKN+++CG HPK+ +YFGFITKHP DHRFACH+F+S+ ST  +A+ +G  F+++Y  +++Y  P ED+Y+E
Sbjct:  483 IINGEE-QEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKI-------GVKADDSQEA------KGNKC----------SHFFQLKNISFCGYHPKNNKYFGFITKHPADHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 711          
The following BLAST results are available for this feature:
BLAST of TCONS_00001793 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
JIP16.419e-5639.53C-Jun-amino-terminal kinase-interacting protein 1 ... [more]
back to top