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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001792 ID=TCONS_00001792|Name=TCONS_00001792|organism=Clytia hemisphaerica|type=transcript|length=1747bp
TTCGGATTACAGGTCATTTTTATTTCTGGCTTACTTTAAAaggacaaaaa
tttgaaaactgacGTACAATGAATATTGATAAATGGATCACTTGGATTCT
AACTATCCTCATTGCACCACAAACATACACCAAGTCACTCAAAGACAAAG
TATTTTTGTTAGTATTCGATGGTTTTGTACACGATTTCGAAACACTAACA
ACCAATATGCCAAACTTTCAAAAGTTAGCATCTGAAGGTGTCAAAGCTAG
AGGCTTGATTCCTCCTTTTCCATCACAAACTTCACCCAGTATGGTGACAC
TTACAACAGGATTGTATCCAGAGTCTCATGGAATTATAGACAATTATTTT
TTCGATGAAAAAGGGAATTTATTTTCGTATACTGATGATCCGAGAAACAC
AGCTCATTTTTATACCCAAGAACCGATTTGGCTATCCAATCAGAAACAGG
GAAGTGGACACAGTTCAGTCTACTACTGGCCAGGGTACTATGCATTCACA
GAAAAACCAACCTACCATAACCATCATATCACTTCACTTGGTGCAAACGT
CACCACAGGTCGTCAAGCTATCGATGAAACGTTCGAACATTATGAAAGAG
ACCCATCGCTGAATTTCATGGTGGTTTATGTAGATGCACCAGACATCGTT
GGTCACTATCAAGGAAGATCGTCTGATCAGtaCAGAGAACGTATGGAGAA
TTTGGACAAAGAAATATTAGGTTACGTATTGGAGAAATTATCTAAACGTC
CTGAAATCAATCTATTGGTGACATCAGATCATGGACATATCGATGTTGCA
CATGAGCATATACATTTTATATCTGATTATTTGAGCGATGAAATGCTGGG
AGAGAAACCGTACTGCAGTAGTACTTGTTCGTTAAGACCATCTGATGGAT
ACACAGCTGATCAGATATTGGAATATCTTGCACCACTTTTTGAAACTGGA
GGATTCAGAGTTTTCAAcAGAGACAATCTTTATGATCAATTTCCAGACCA
TCTTCATTTCACCAATCACAGATGGATACCTCCTATATTGATCTTGGCCG
AACCAGGTTGGCTTCTACTCGATGATCGATCAGACCAATGGTCAAAATGG
CACGGACTTCACGGCTATGATCCGAGTACATGTCCTGAAATGCAGACTAT
TTTCTACGCACGCGGTCCTGCTTTTAAACGGGCTGTTACTATGGAAGCAT
TCGAAAGTGTCAACGTTTACCCGTTGTTAGCGCATTTACTTGGTGTAAAA
CCAAGACCGAATAATGGATCTTTGGCTGTTTTCAAACACGTTTTGAAGGA
CGGGAATCTGGTCCAAGAGGAGTCAAGTGGGAACGGAAATATTACAAACT
TCGTCATAGGGCTTGTTATTGTTTTGGTATTAGTAATCGGACTTTATTTT
GGGACACAAAACAAAAGCTCTAGAGATACTTTTGGTAGAGTGAAAAAGaa
cgtttaaaaaaatattaatgtatatatttattattcatcatacaatgtat
agcaatgtgccctcccggttattaccataatggctttatggcaactcctg
aacttgggcacaggatgtacggtattattcatcatcaattttacccttat
atttttgttgatgctatttttcaaattgtattttcaaaaattttgtcacG
TTCATCTATTTTGGGAAGAGCTACCGTTCTAAAAACTGATTTCAAAATCT
CAcattgaatacaccttttcgaccgtagccgccaattgccgcgcggg Run BLAST on NCBI protein sequence of TCONS_00001792-protein >TCONS_00001792-protein ID=TCONS_00001792-protein|Name=TCONS_00001792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=462bp
MNIDKWITWILTILIAPQTYTKSLKDKVFLLVFDGFVHDFETLTTNMPNF
QKLASEGVKARGLIPPFPSQTSPSMVTLTTGLYPESHGIIDNYFFDEKGN
LFSYTDDPRNTAHFYTQEPIWLSNQKQGSGHSSVYYWPGYYAFTEKPTYH
NHHITSLGANVTTGRQAIDETFEHYERDPSLNFMVVYVDAPDIVGHYQGR
SSDQYRERMENLDKEILGYVLEKLSKRPEINLLVTSDHGHIDVAHEHIHF
ISDYLSDEMLGEKPYCSSTCSLRPSDGYTADQILEYLAPLFETGGFRVFN
RDNLYDQFPDHLHFTNHRWIPPILILAEPGWLLLDDRSDQWSKWHGLHGY
DPSTCPEMQTIFYARGPAFKRAVTMEAFESVNVYPLLAHLLGVKPRPNNG
SLAVFKHVLKDGNLVQEESSGNGNITNFVIGLVIVLVLVIGLYFGTQNKS
SRDTFGRVKKNV Run BLAST on NCBI transcript from alignment at sc0000012:569050..575706+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001792 ID=TCONS_00001792|Name=TCONS_00001792|organism=Clytia hemisphaerica|type=transcript|length=6657bp|location=Sequence derived from alignment at sc0000012:569050..575706+ (Clytia hemisphaerica)
TTCGGATTACAGGTCATTTTTATTTCTGGCTTACTTTAAAaggacaaaaa
tttgaaaactgacGTACAATGAATATTGATAAATGGATCACTTGGATTCT
AACTATCCTCATTGCACCACAAACATACACCAAGTCACTCAAAGACAAAG
TATTTTTGTTAGTATTCGATGGTTTTGTACACGATTTCGAAACACTAACA
ACCAATATGCCAAACTTTCAAAAGTTAGCATCTGAAGGTGTCAAAGCTAG
AGGCTTGATTCCTCCTTTTCCATCACAAACTTCACCCAGTATGGTGACAC
TTACAACAGGATTGTATCCAGAGTCTCATGGAATTATAGACAATTATTTT
TTCGATGAAAAAGGGAATTTATTTTCGTATACTGATGATCCGAGAAACAC
AGCTCATTTTTATACCCAAGAACCGATTTGGCTATCCAATCAGAAACAGG
GAAGTGGTAAGGCCCCACTCACTTACACTGACTTACTTACTTGTACACAG
AATTTCTACGCTTACGCAACTGAAATCTGTTTACAAACCTTTTTTACGAT
GTAAATGTTGCTAGGGCAGACATTTCaagtcaattttgaaaaaaaaacga
actcataaaatcataaaagaaACACAGCTCCTTCTCATAGACCTGGTAGA
TTTTCCAGCCAGTTAAGGTGAAANGTTGCTAGGGCAGGCATTTCaagtca
atttaaaaaaaaaacgaactcataaaatcataaaagaaACACAGCTCCTT
CTCATAGACCTGGTAGATTTTCCAGCCAGTTAAGGTGAAAATAACACAGA
CTGAAATTCGATGAGAactgatatttttatgtttttaatgaTCGGGGATT
TGAAGTCCATTCTTTTCAAGTCAGAATATTCCGTTGAGATGGAAATAATA
GccgataccttatcggccaaaacttagttcGGCCCTAAATGACTAAATtc
tggcttggtgactaaaattagggccaactaaaaatttggtctgactaaaa
tttgggccaactAAGTTTTGGGCGATAAGGtactttgcagtgaggatttc
ttatttgtttattttcaacaGGGTCAAAAATTGGAGTGTATTTTTCGTTA
ATATCGTTCACTCGGGGCAATGTTTTGGCCAAATATACCAGTTGTTGGGG
tctcaccgggtctgtgaggaGGGGATGTTAAGGTTAAACCTTTTAAAAAA
TAACTAAGCACTTAAAGATAGCCCATAGAAAAACTTTATTAAATTCATTC
TGTTAAATAAAATGATAGTTTTTAAGATATTCAGGACATACCTTGTCTCA
CTCACTGACAAACATTCCACAATCATTCTTAGCTTAGAAATCTAAGTTtg
attgattcagtcacttggttTAATCTGATGTttagttgtgactgaatatt
tAGTATCCCAAGGCAAACTTTAAAATctgtaaatataaaaatatctttaa
agtttcgaaaacgctatattgtcTTAAGCTGTACTTCTTAGCCCTATGAA
TACGGGCTCAGTTACCTAAGCTAGATTATTCTTATCTTTTGCAGGACACA
GTTCAGTCTACTACTGGCCAGGGTACTATGCATTCACAGAAAAACCAACC
TACCATAACCATCATATCACTTCACTTGGTGCAAACGTCACCACAGGTCG
TCAAGCTATCGATGAAACGTTCGAACATTATGAAAGAGACCCATCGCTGA
ATTTCATGGTGGTTTATGTAGATGCACCAGACATCGTTGGTCACTATCAA
GGAAGATCGTCTGATCAGGTATGCATAGAAGTCTTGTCGCAAAGCTCAAA
ATTGTTGTTTGAATTAAAAGGGATGAAACTTTTACGGAAACGCAGGATTA
tcaaaaggaagaaaaatttcgATTAATTCTGTGAAAAATTCTGTAAAGTT
GATTagcgaaaaaacatttttcaggtATATGTAGAATCTGTTTTCTGGCG
CGCGGAGAAAAGCTccatttttggaaagttgatTCTCGCAAAATCcgaaa
aattcgcgaaattgattattcgcgaaagtttcttcccctAAAAAGTAATT
TGCAGCTTTTCTTCAAAATCGCATATTCGATAtaattttatgtttgattt
ttagtaCAGAGAACGTATGGAGAATTTGGACAAAGAAATATTAGGTTACG
TATTGGAGAAATTATCTAAACGTCCTGAAATCAATCTATTGGTGACATCA
GATCATGGACATATCGATGTTGCACATGAGCATATACATTTTATATCTGA
TTATTTGAGCGATGAAATGCTGGGAGAGAAACCGTACTGCAGTAGTACTT
GTTCGTTAAGACCATCTGATGGATACACAGCTGATCAGATATTGGAATAT
CTTGCACCACTTTTTGAAACTGGAGGATTCAGAGTTTTCAAGTAAGTTTc
gttgttttcataatgactCTTTTTAAGCCAATGAACTCGAGTTTACTTAG
TATCAATGTGATTAATCCTGAGCGTTTCTTTTTGTGGATGATGTTATAAC
TATAGATCCAACCTTATCTCCGTGTaccccaggctttatttacgttattg
ATGGACGCTAGAGAATACTCTGATGCGAGTTTTCCCCTGTAAAATAGCAT
ATCATTACGTCAACCCCACGGAAGTCATTACATAACTTTAAAGCTCTTAG
CTACGATTAAAATCGTAAAGTAGAGATAGCCTATTCAAACGATAGCAGTC
CATGGTTATCTGTCAAATACAGATGATAGggaatagataaaaaaaaaact
tattttcagaATTATAAGGGTTTATATGTTTATAGCTGGAATAAAAAATA
CCTTCCTAGCTCTTCTTTATTGCATCATTCATATAGActaaaaaaagata
tttcaattcctGCTCCTCATCTAAAATCGTAAATATCAATATAAACACAT
TCCTGTCTCATAGCACTTCTTTCCACAGTAGAGATGAAATTTCTATTAAA
ATCCCAATGGTGATACAAATTCTATTCCGTTACTAGGTCAGAAATCCAAT
CgggatggttttagagtgcaatttattttcaatgaatttcaaataAAGAT
GTAAATAAAGTCATTTTTCCAGTGGAAGTAATTTTCCCAACGGAACAAAA
TTTTCGTTAATATCGTTCACCGTAACCAAATTTTTCAGGAGCAGGGAGGT
CCCACCAGGTCTTTGACGCAGGGGTTTCATGTTGTCATTATCCAAGATAT
TTCTGTCATACCCCTTGCTGATATTTTTGGTCGCCTTTTTTTCTGGACTA
TATTTTCAGATAAGGTTTTCTTAATCAAGTGAGTCACGGCGATCTGTAAc
tggattaatcggattcaaaaaatttgggttttgccaaattttgaaaaaaa
gggtTAGAATAAAAACtccctttttcttttatcctttgaAGAGCTTAAAA
GAGCACATtctctcaaaatttcaagttcttAGCTTTTTCCCATccagaat
tatcttgattccgatttagagggatcccACCCGGGATGAGGAAGGGATAa
agggatctctcgaaaaccAAAGTGTAtcaaaaacttctttcttctactTT
TGACTTGTTGTAAGGTGTTCATCTCCATATGTACACCAATTTTGGAGATA
CAGAGAAAACAAGCCGAAATAATCctgattttttaaaagttccACCGAAA
GATCACCGTGAGTAGGAACAATATTTTGGAAACAATATCGAAATAAAAAG
Gtcatttgtgtaggagagcatatttttatgacacagtaattatattttta
tactagtcatagctttcactaaatgcccccactgaaaggtcatgtcatgc
acttataaagcttttaatgctttaaagattgaaacataaaaaataNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgttgctactttgcctaa
taaacaatagtcaagaggatactgcggataaaatttatcaaaaagttctg
cgccatcttaaatagggcgaaatagaaaccaatcattgctaaggcccgga
ctccactcgcctacgctgtgattgcacttgcacttctcaagcaaaatctt
ttatgttgttggtcaaaagaaaaataaaggaatgccattgtggtccattc
agacgtacagtcgagaaaagttgagatgcgcctaattttttttaaagtgt
atagtactttttcatgatgcaatcttctctccaagctgaaaggattgaat
ccattaagatgatcgcagcgcagacaatgaagagaggTGCcctcaggaag
ctagactttttgagtttatacctatatactttcacttcatggtgtttctg
tatgactgtctgtgtgcctagtctaaccaccgttaaatgccttcgggaag
atccctcctaacttggaaagacagaattggagctattttaccaaactact
ggagcgcaagttattacgtaggctatcacaactgaaaaagttgaatgtgc
gcctatacaaacttttttcaggttttccaaatatatttaccacactgaac
aaacagtgaaaacactctaatgaggtaaatctattaaaaaaaaagtttgt
tttcatatgcacacattcaacttttttgtacccCGGGGgaggtactaccc
ttgtcgaccgacgggggtgctccgctgaggttcgaaaaatgcaccctacg
tgggactcgaaatttgcgaaaaaaatgaccctgaatgggactgaaattcc
aaaattttctcaaattttctactttttccccaaattttccaaaaataggc
accctacaagggactgatttttctcgtggaagttaaaaaaggtaccctga
ccagcggagtatccccgtaacccatcttgccctagtatcCCCCCCGggtt
ttgtactttgccggtatcttgttttaccaagttaagaaagacattcctga
gttacgaccatataatggtctttaaagctcaagaagttCTATAAACAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNataaattacagtttgaacaaaaatatcaaatgtacatttgaaaa
cttgagcaaacttctttaaagattccagaaaaagaattgaaatcattgct
gaaattaACTTCtaactaaattacagtattttttcaattttaaagacaag
aaacaaaattagccatacaaaacactttttccagtcaaagacGAAAGAAT
Caactcatcatcataaccagtctgccattttgtttgttttgatttgcaaa
agtaatattgtaattcgtgttatggtgtaattatatactttttctataat
ttgcatttataacactcgcttcagcttttcaatgctaaatcaaaactaat
taaatgtaatatataataatggtaatagcatataacgtaatatgaaaatg
tgtataacatttaccggtgtataatttaccgccatatttttgcggaacac
ttaattggccggaaatcaaattacaaacaaacacacaaaaaaacgcaaag
attcgagattccagtacaatatgcgtgaagctataagtgcctcctcgtcg
ctgcgctcctgcgggggcaattatgAATAGACAATTACAATGTCATAAAA
Atatgctctcctacacaaattttgccccctcctgtctacgctactgtaat
attcacccaaattttttttaattacagcAGAGACAATCTTTATGATCAAT
TTCCAGACCATCTTCATTTCACCAATCACAGATGGATACCTCCTATATTG
ATCTTGGCCGAACCAGGTTGGCTTCTACTCGATGATCGATCAGACCAATG
GTCAAAATGGCACGGACTTCACGGCTATGATCCGAGTACATGTCCTGAAA
TGCAGACTATTTTCTACGCACGCGGTCCTGCTTTTAAACGGGCTGTTACT
ATGGAAGCATTCGAAAGTGTCAACGTTTACCCGTTGTTAGCGCATTTACT
TGGTGTAAAACCAAGACCGAATAATGGATCTTTGGCTGTTTTCAAACACG
TTTTGAAGGACGGGAATCTGGTCCAAGAGGAGTCAAGTGGGAACGGAAAT
ATTACAAACTTCGTCATAGGGCTTGTTATTGTTTTGGTATTAGTAATCGG
ACTTTATTTTGGGACACAAAACAAAAGCTCTAGAGATACTTTTGGTAGAG
TGAAAAAGaacgtttaaaaaaatattaatgtatatatttattattcatca
tacaatgtatagcaatgtgccctcccggttattaccataatggctttatg
gcaactcctgaacttgggcacaggatgtacggtattattcatcatcaatt
ttacccttatatttttgttgatgctatttttcaaattgtattttcaaaaa
ttttgtcacGTTCATCTATTTTGGGAAGAGCTACCGTTCTAAAAACTGAT
TTCAAAATCTCAcattgaatacaccttttcgaccgtagccgccaattgcc
gcgcggg Coding sequence (CDS) from alignment at sc0000012:569050..575706+ >TCONS_00001792 ID=TCONS_00001792|Name=TCONS_00001792|organism=Clytia hemisphaerica|type=CDS|length=5556bp|location=Sequence derived from alignment at sc0000012:569050..575706+ (Clytia hemisphaerica)
ATGAATATTGATAAATGGATCACTTGGATTCTAACTATCCTCATTGCACC
ACAAACATACACCAAGTCACTCAAAGACAAAGTATTTTTGTTAGTATTCG
ATGGTTTTGTACACGATTTCGAAACACTAACAACCAATATGCCAAACTTT
CAAAAGTTAGCATCTGAAGGTGTCAAAGCTAGAGGCTTGATTCCTCCTTT
TCCATCACAAACTTCACCCAGTATGGTGACACTTACAACAGGATTGTATC
CAGAGTCTCATGGAATTATAGACAATTATTTTTTCGATGAAAAAGGGAAT
TTATTTTCGTATACTGATGATCCGAGAAACACAGCTCATTTTTATACCCA
AGAACCGATTTGGCTATCCAATCAGAAACAGGGAAGTGGACACAGTTCAG
TCTACTACTGGCCAGGGTACTATGCATTCACAGAAAAACCAACCTACCAT
AACCATCATATCACTTCACTTGGTGCAAACGTCACCACAGGTCGTCAAGC
TATCGATGAAACGTTCGAACATTATGAAAGAGACCCATCGCTGAATTTCA
TGGTGGTTTATGTAGATGCACCAGACATCGTTGGTCACTATCAAGGAAGA
TCGTCTGATCAGtaCAGAGAACGTATGGAGAATTTGGACAAAGAAATATT
AGGTTACGTATTGGAGAAATTATCTAAACGTCCTGAAATCAATCTATTGG
TGACATCAGATCATGGACATATCGATGTTGCACATGAGCATATACATTTT
ATATCTGATTATTTGAGCGATGAAATGCTGGGAGAGAAACCGTACTGCAG
TAGTACTTGTTCGTTAAGACCATCTGATGGATACACAGCTGATCAGATAT
TGGAATATCTTGCACCACTTTTTGAAACTGGAGGATTCAGAGTTTTCAAc
AGAGACAATCTTTATGATCAATTTCCAGACCATCTTCATTTCACCAATCA
CAGATGGATACCTCCTATATTGATCTTGGCCGAACCAGGTTGGCTTCTAC
TCGATGATCGATCAGACCAATGGTCAAAATGGCACGGACTTCACGGCTAT
GATCCGAGTACATGTCCTGAAATGCAGACTATTTTCTACGCACGCGGTCC
TGCTTTTAAACGGGCTGTTACTATGGAAGCATTCGAAAGTGTCAACGTTT
ACCCGTTGTTAGCGCATTTACTTGGTGTAAAACCAAGACCGAATAATGGA
TCTTTGGCTGTTTTCAAACACGTTTTGAAGGACGGGAATCTGGTCCAAGA
GGAGTCAAGTGGGAACGGAAATATTACAAACTTCGTCATAGGGCTTGTTA
TTGTTTTGGTATTAGTAATCGGACTTTATTTTGGGACACAAAACAAAAGC
TCTAGAGATACTTTTGGTAGAGTGAAAAAGaacgtttaaATGAATATTGA
TAAATGGATCACTTGGATTCTAACTATCCTCATTGCACCACAAACATACA
CCAAGTCACTCAAAGACAAAGTATTTTTGTTAGTATTCGATGGTTTTGTA
CACGATTTCGAAACACTAACAACCAATATGCCAAACTTTCAAAAGTTAGC
ATCTGAAGGTGTCAAAGCTAGAGGCTTGATTCCTCCTTTTCCATCACAAA
CTTCACCCAGTATGGTGACACTTACAACAGGATTGTATCCAGAGTCTCAT
GGAATTATAGACAATTATTTTTTCGATGAAAAAGGGAATTTATTTTCGTA
TACTGATGATCCGAGAAACACAGCTCATTTTTATACCCAAGAACCGATTT
GGCTATCCAATCAGAAACAGGGAAGTGGACACAGTTCAGTCTACTACTGG
CCAGGGTACTATGCATTCACAGAAAAACCAACCTACCATAACCATCATAT
CACTTCACTTGGTGCAAACGTCACCACAGGTCGTCAAGCTATCGATGAAA
CGTTCGAACATTATGAAAGAGACCCATCGCTGAATTTCATGGTGGTTTAT
GTAGATGCACCAGACATCGTTGGTCACTATCAAGGAAGATCGTCTGATCA
GtaCAGAGAACGTATGGAGAATTTGGACAAAGAAATATTAGGTTACGTAT
TGGAGAAATTATCTAAACGTCCTGAAATCAATCTATTGGTGACATCAGAT
CATGGACATATCGATGTTGCACATGAGCATATACATTTTATATCTGATTA
TTTGAGCGATGAAATGCTGGGAGAGAAACCGTACTGCAGTAGTACTTGTT
CGTTAAGACCATCTGATGGATACACAGCTGATCAGATATTGGAATATCTT
GCACCACTTTTTGAAACTGGAGGATTCAGAGTTTTCAAcAGAGACAATCT
TTATGATCAATTTCCAGACCATCTTCATTTCACCAATCACAGATGGATAC
CTCCTATATTGATCTTGGCCGAACCAGGTTGGCTTCTACTCGATGATCGA
TCAGACCAATGGTCAAAATGGCACGGACTTCACGGCTATGATCCGAGTAC
ATGTCCTGAAATGCAGACTATTTTCTACGCACGCGGTCCTGCTTTTAAAC
GGGCTGTTACTATGGAAGCATTCGAAAGTGTCAACGTTTACCCGTTGTTA
GCGCATTTACTTGGTGTAAAACCAAGACCGAATAATGGATCTTTGGCTGT
TTTCAAACACGTTTTGAAGGACGGGAATCTGGTCCAAGAGGAGTCAAGTG
GGAACGGAAATATTACAAACTTCGTCATAGGGCTTGTTATTGTTTTGGTA
TTAGTAATCGGACTTTATTTTGGGACACAAAACAAAAGCTCTAGAGATAC
TTTTGGTAGAGTGAAAAAGaacgtttaaATGAATATTGATAAATGGATCA
CTTGGATTCTAACTATCCTCATTGCACCACAAACATACACCAAGTCACTC
AAAGACAAAGTATTTTTGTTAGTATTCGATGGTTTTGTACACGATTTCGA
AACACTAACAACCAATATGCCAAACTTTCAAAAGTTAGCATCTGAAGGTG
TCAAAGCTAGAGGCTTGATTCCTCCTTTTCCATCACAAACTTCACCCAGT
ATGGTGACACTTACAACAGGATTGTATCCAGAGTCTCATGGAATTATAGA
CAATTATTTTTTCGATGAAAAAGGGAATTTATTTTCGTATACTGATGATC
CGAGAAACACAGCTCATTTTTATACCCAAGAACCGATTTGGCTATCCAAT
CAGAAACAGGGAAGTGGACACAGTTCAGTCTACTACTGGCCAGGGTACTA
TGCATTCACAGAAAAACCAACCTACCATAACCATCATATCACTTCACTTG
GTGCAAACGTCACCACAGGTCGTCAAGCTATCGATGAAACGTTCGAACAT
TATGAAAGAGACCCATCGCTGAATTTCATGGTGGTTTATGTAGATGCACC
AGACATCGTTGGTCACTATCAAGGAAGATCGTCTGATCAGtaCAGAGAAC
GTATGGAGAATTTGGACAAAGAAATATTAGGTTACGTATTGGAGAAATTA
TCTAAACGTCCTGAAATCAATCTATTGGTGACATCAGATCATGGACATAT
CGATGTTGCACATGAGCATATACATTTTATATCTGATTATTTGAGCGATG
AAATGCTGGGAGAGAAACCGTACTGCAGTAGTACTTGTTCGTTAAGACCA
TCTGATGGATACACAGCTGATCAGATATTGGAATATCTTGCACCACTTTT
TGAAACTGGAGGATTCAGAGTTTTCAAcAGAGACAATCTTTATGATCAAT
TTCCAGACCATCTTCATTTCACCAATCACAGATGGATACCTCCTATATTG
ATCTTGGCCGAACCAGGTTGGCTTCTACTCGATGATCGATCAGACCAATG
GTCAAAATGGCACGGACTTCACGGCTATGATCCGAGTACATGTCCTGAAA
TGCAGACTATTTTCTACGCACGCGGTCCTGCTTTTAAACGGGCTGTTACT
ATGGAAGCATTCGAAAGTGTCAACGTTTACCCGTTGTTAGCGCATTTACT
TGGTGTAAAACCAAGACCGAATAATGGATCTTTGGCTGTTTTCAAACACG
TTTTGAAGGACGGGAATCTGGTCCAAGAGGAGTCAAGTGGGAACGGAAAT
ATTACAAACTTCGTCATAGGGCTTGTTATTGTTTTGGTATTAGTAATCGG
ACTTTATTTTGGGACACAAAACAAAAGCTCTAGAGATACTTTTGGTAGAG
TGAAAAAGaacgtttaaATGAATATTGATAAATGGATCACTTGGATTCTA
ACTATCCTCATTGCACCACAAACATACACCAAGTCACTCAAAGACAAAGT
ATTTTTGTTAGTATTCGATGGTTTTGTACACGATTTCGAAACACTAACAA
CCAATATGCCAAACTTTCAAAAGTTAGCATCTGAAGGTGTCAAAGCTAGA
GGCTTGATTCCTCCTTTTCCATCACAAACTTCACCCAGTATGGTGACACT
TACAACAGGATTGTATCCAGAGTCTCATGGAATTATAGACAATTATTTTT
TCGATGAAAAAGGGAATTTATTTTCGTATACTGATGATCCGAGAAACACA
GCTCATTTTTATACCCAAGAACCGATTTGGCTATCCAATCAGAAACAGGG
AAGTGGACACAGTTCAGTCTACTACTGGCCAGGGTACTATGCATTCACAG
AAAAACCAACCTACCATAACCATCATATCACTTCACTTGGTGCAAACGTC
ACCACAGGTCGTCAAGCTATCGATGAAACGTTCGAACATTATGAAAGAGA
CCCATCGCTGAATTTCATGGTGGTTTATGTAGATGCACCAGACATCGTTG
GTCACTATCAAGGAAGATCGTCTGATCAGtaCAGAGAACGTATGGAGAAT
TTGGACAAAGAAATATTAGGTTACGTATTGGAGAAATTATCTAAACGTCC
TGAAATCAATCTATTGGTGACATCAGATCATGGACATATCGATGTTGCAC
ATGAGCATATACATTTTATATCTGATTATTTGAGCGATGAAATGCTGGGA
GAGAAACCGTACTGCAGTAGTACTTGTTCGTTAAGACCATCTGATGGATA
CACAGCTGATCAGATATTGGAATATCTTGCACCACTTTTTGAAACTGGAG
GATTCAGAGTTTTCAAcAGAGACAATCTTTATGATCAATTTCCAGACCAT
CTTCATTTCACCAATCACAGATGGATACCTCCTATATTGATCTTGGCCGA
ACCAGGTTGGCTTCTACTCGATGATCGATCAGACCAATGGTCAAAATGGC
ACGGACTTCACGGCTATGATCCGAGTACATGTCCTGAAATGCAGACTATT
TTCTACGCACGCGGTCCTGCTTTTAAACGGGCTGTTACTATGGAAGCATT
CGAAAGTGTCAACGTTTACCCGTTGTTAGCGCATTTACTTGGTGTAAAAC
CAAGACCGAATAATGGATCTTTGGCTGTTTTCAAACACGTTTTGAAGGAC
GGGAATCTGGTCCAAGAGGAGTCAAGTGGGAACGGAAATATTACAAACTT
CGTCATAGGGCTTGTTATTGTTTTGGTATTAGTAATCGGACTTTATTTTG
GGACACAAAACAAAAGCTCTAGAGATACTTTTGGTAGAGTGAAAAAGaac
gtttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001792-exon-sc0000012-1491911889:569050..569505 | TCONS_00001792-exon-sc0000012-1491911889:569050..569505 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1510915933:569050..569505 | TCONS_00001792-exon-sc0000012-1510915933:569050..569505 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1575043694:569050..569505 | TCONS_00001792-exon-sc0000012-1575043694:569050..569505 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1491911889:570594..570817 | TCONS_00001792-exon-sc0000012-1491911889:570594..570817 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1510915933:570594..570817 | TCONS_00001792-exon-sc0000012-1510915933:570594..570817 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1575043694:570594..570817 | TCONS_00001792-exon-sc0000012-1575043694:570594..570817 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1491911889:571154..571440 | TCONS_00001792-exon-sc0000012-1491911889:571154..571440 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1510915933:571154..571440 | TCONS_00001792-exon-sc0000012-1510915933:571154..571440 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1575043694:571154..571440 | TCONS_00001792-exon-sc0000012-1575043694:571154..571440 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1491911889:574927..575706 | TCONS_00001792-exon-sc0000012-1491911889:574927..575706 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1510915933:574927..575706 | TCONS_00001792-exon-sc0000012-1510915933:574927..575706 | Clytia hemisphaerica | exon |
| TCONS_00001792-exon-sc0000012-1575043694:574927..575706 | TCONS_00001792-exon-sc0000012-1575043694:574927..575706 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:569050..575706 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002591 | Phosphodiest/P_Trfase |
| IPR017849 | Alkaline_Pase-like_a/b/a |
| IPR017850 | Alkaline_phosphatase_core |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008152 | metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008152 |
metabolic process |
| molecular_function |
GO:0003824 |
catalytic activity |
Blast
BLAST of TCONS_00001792 vs. Swiss-Prot (Human)
Match: ENPP5 (Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 OS=Homo sapiens GN=ENPP5 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 2.229e-41 Identity = 121/408 (29.66%), Postives = 208/408 (50.98%), Query Frame = 3
Query: 87 ITWILTILIAPQTYT-KSLKDKVFLLVFDGFVHDFETLTTNMPNFQKLASEGVKARGLIPPFPSQTSPSMVTLTTGLYPESHGIIDNYFFDEKGNLFSYTDDPRNT--AHFYTQE-PIWLSNQKQGSGHSSVYYWPGYYAFTEK--PTYHNHHITSLGANVTTGRQAIDETFEHYERDPSLNFMVVYVDAPDIVGHYQGRSSDQYRERMENLDKEILGYVLEKLSKRP---EINLLVTSDHGHIDVAHEHIHFISDYLSDE---MLGEKPYCSSTCSLRPSDGYTADQILEYLAPLFETGGFRVFNRDNLYDQFPDHLHFTNHRWIPPILILAEPGWLLLDDRSDQWSKWHGLHGYDPSTCPEMQTIFYARGPAFKRAVTMEAFESVNVYPLLAHLLGVKPRPNNGSL 1274
+++IL L T++ + + KV L+ FDGF D+ P+F + GV + + F ++T P+ TL TGL+ E+HGI+ N FD N S++ D N + F+ + PIW++NQ+ G S WPG K PT++ + S+ + + + E + +N ++Y + PD +GH+ G S + ++DK+ LGY+++ L K +NL++TSDHG + E + + YL + ++ + P ++ P +G D++ E L V+ ++++ P+ H+ + I PI+ +A+ GW +L ++SD + G HGYD + +M IF A GPAF++ + EA S ++YPLL HLL + P+NGS
Sbjct: 8 VSFILAALSLSTTFSLQPDQQKVLLVSFDGFRWDY-LYKVPTPHFHYIMKYGVHVKQVTNVFITKTYPNHYTLVTGLFAENHGIVANDMFDPIRNK-SFSLDHMNIYDSKFWEEATPIWITNQRAGHT-SGAAMWPGTDVKIHKRFPTHYMPYNESV-----SFEDRVAKIIEWFTSKEPINLGLLYWEDPDDMGHHLGPDSPLMGPVISDIDKK-LGYLIQMLKKAKLWNTLNLIITSDHGMTQCSEERLIELDQYLDKDHYTLIDQSP----VAAILPKEG-KFDEVYEALT--HAHPNLTVYKKEDV----PERWHYKYNSRIQPIIAVADEGWHILQNKSDDFLL--GNHGYD-NALADMHPIFLAHGPAFRKNFSKEAMNSTDLYPLLCHLLNITAMPHNGSF 392
The following BLAST results are available for this feature:
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